View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3151_1D_low_11 (Length: 339)
Name: NF3151_1D_low_11
Description: NF3151_1D
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3151_1D_low_11 |
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Alignment Details
Target: chr1 (Bit Score: 306; Significance: 1e-172; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 306; E-Value: 1e-172
Query Start/End: Original strand, 8 - 317
Target Start/End: Original strand, 14597183 - 14597492
Alignment:
| Q |
8 |
caacaagaaatgacagacacagattctgctactgtaggagcatcgagtggttcacgaggtttcctaagaacacctcctggacgtccatacctgacgttag |
107 |
Q |
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| T |
14597183 |
caacaagaaatgacagacacagattctgctactgtaggagcatcgagtggttcacgaggtttcctaagaacacctcctggacgtccatacctgacgttag |
14597282 |
T |
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| Q |
108 |
gatgatctgcaagagggcgaccttggaactcagcgactggtatgctatcagccaacatggatgaattaccgaatcgcttgggcaacaagtttgaatctaa |
207 |
Q |
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| T |
14597283 |
gatgatctgcaagagggcgaccttggaactcagcgactggtatgctatcagccaacatggatgaattaccaaatcgcttgggcaacaagtttgaatctaa |
14597382 |
T |
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| Q |
208 |
atcttgatcaaactcactggcattcaaggccggtgtagtttcacagacttcatccgtacattcatgtttaggatcttttgtgtcccaatcacctgaggga |
307 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
14597383 |
atcttgatcaaactcactggcattcaaggccggtgtagtttcacagacttcatccgtacattcatgtttaggatcttttgtgtcccaatcacctgaggga |
14597482 |
T |
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| Q |
308 |
gggtcaaatc |
317 |
Q |
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|||||||||| |
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| T |
14597483 |
gggtcaaatc |
14597492 |
T |
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