View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3151_1D_low_20 (Length: 293)

Name: NF3151_1D_low_20
Description: NF3151_1D
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3151_1D_low_20
NF3151_1D_low_20
[»] chr3 (30 HSPs)
chr3 (1-177)||(7756169-7756345)
chr3 (178-234)||(36418060-36418116)
chr3 (176-230)||(33689755-33689809)
chr3 (176-229)||(40033833-40033886)
chr3 (177-228)||(33689381-33689432)
chr3 (172-234)||(3850499-3850561)
chr3 (178-228)||(9294336-9294386)
chr3 (178-228)||(40758147-40758197)
chr3 (177-234)||(19741264-19741321)
chr3 (176-228)||(23458357-23458409)
chr3 (178-234)||(34142590-34142646)
chr3 (176-228)||(40758488-40758540)
chr3 (176-228)||(42342789-42342841)
chr3 (181-228)||(36150530-36150577)
chr3 (169-228)||(41557999-41558058)
chr3 (181-228)||(46474818-46474865)
chr3 (176-234)||(2796177-2796235)
chr3 (176-234)||(51993962-51994020)
chr3 (181-234)||(36417691-36417744)
chr3 (181-226)||(42343111-42343156)
chr3 (181-226)||(53756747-53756792)
chr3 (180-228)||(9292245-9292293)
chr3 (177-228)||(26463964-26464015)
chr3 (184-234)||(9368673-9368723)
chr3 (181-234)||(21783403-21783454)
chr3 (173-234)||(19740918-19740979)
chr3 (181-226)||(26463635-26463680)
chr3 (179-228)||(35712045-35712094)
chr3 (181-226)||(46475160-46475205)
chr3 (179-228)||(51994264-51994313)
[»] chr5 (64 HSPs)
chr5 (172-234)||(20840527-20840589)
chr5 (170-228)||(28269414-28269472)
chr5 (176-234)||(5993887-5993945)
chr5 (176-234)||(14194421-14194479)
chr5 (177-230)||(6150453-6150506)
chr5 (176-228)||(20814513-20814565)
chr5 (178-234)||(35920556-35920612)
chr5 (181-228)||(13362606-13362653)
chr5 (177-228)||(16157233-16157284)
chr5 (175-234)||(35512486-35512545)
chr5 (176-234)||(28770867-28770925)
chr5 (178-228)||(28771216-28771266)
chr5 (177-234)||(3528872-3528929)
chr5 (176-225)||(6150801-6150850)
chr5 (177-234)||(11761748-11761805)
chr5 (177-234)||(11762089-11762146)
chr5 (179-228)||(18247087-18247136)
chr5 (177-234)||(18670201-18670258)
chr5 (177-234)||(21265514-21265571)
chr5 (175-228)||(38475377-38475430)
chr5 (177-234)||(39453671-39453728)
chr5 (177-234)||(42265734-42265791)
chr5 (178-234)||(186791-186847)
chr5 (178-234)||(3529214-3529270)
chr5 (178-226)||(5024019-5024067)
chr5 (176-228)||(13963207-13963259)
chr5 (178-234)||(17202771-17202827)
chr5 (180-228)||(19892310-19892358)
chr5 (176-228)||(20840815-20840867)
chr5 (178-234)||(27587148-27587204)
chr5 (176-228)||(29646360-29646412)
chr5 (180-228)||(39453302-39453350)
chr5 (181-228)||(5024396-5024443)
chr5 (176-227)||(14194801-14194852)
chr5 (177-228)||(18247454-18247505)
chr5 (177-228)||(24547503-24547554)
chr5 (179-230)||(38442443-38442494)
chr5 (181-228)||(43159192-43159239)
chr5 (176-234)||(13962862-13962920)
chr5 (178-228)||(27587493-27587543)
chr5 (176-226)||(32242240-32242290)
chr5 (176-234)||(35512146-35512204)
chr5 (177-230)||(5835622-5835675)
chr5 (183-228)||(8322782-8322827)
chr5 (181-226)||(11740690-11740735)
chr5 (179-224)||(11741899-11741944)
chr5 (177-230)||(16083319-16083372)
chr5 (179-228)||(16156856-16156905)
chr5 (179-228)||(35920229-35920278)
chr5 (177-228)||(6301921-6301970)
chr5 (173-225)||(19517988-19518040)
chr5 (180-228)||(19892686-19892734)
chr5 (176-228)||(20814134-20814186)
chr5 (176-224)||(28269762-28269809)
chr5 (177-225)||(32242622-32242670)
chr5 (181-228)||(11047814-11047861)
chr5 (177-228)||(17202398-17202449)
chr5 (181-227)||(21257540-21257586)
chr5 (176-234)||(24547175-24547233)
chr5 (176-234)||(37991197-37991255)
chr5 (181-234)||(5835798-5835851)
chr5 (181-226)||(27937379-27937424)
chr5 (177-225)||(186419-186466)
chr5 (180-224)||(37992670-37992714)
[»] chr4 (66 HSPs)
chr4 (180-234)||(54087067-54087121)
chr4 (176-234)||(35027996-35028054)
chr4 (176-234)||(51692891-51692949)
chr4 (173-234)||(24349669-24349730)
chr4 (177-234)||(46661286-46661343)
chr4 (177-226)||(53129886-53129935)
chr4 (178-234)||(18831689-18831745)
chr4 (174-230)||(34765756-34765812)
chr4 (177-228)||(1178056-1178107)
chr4 (176-234)||(7451832-7451890)
chr4 (176-234)||(36008842-36008900)
chr4 (176-226)||(37976533-37976583)
chr4 (176-234)||(43155868-43155926)
chr4 (176-234)||(50418666-50418724)
chr4 (177-234)||(13058354-13058411)
chr4 (177-234)||(17355924-17355981)
chr4 (177-234)||(24711110-24711167)
chr4 (176-225)||(35508621-35508670)
chr4 (176-228)||(148133-148185)
chr4 (176-228)||(10781862-10781914)
chr4 (176-228)||(13058035-13058087)
chr4 (177-233)||(24350805-24350861)
chr4 (176-228)||(24711458-24711510)
chr4 (176-228)||(39539296-39539348)
chr4 (174-234)||(44967410-44967470)
chr4 (176-228)||(50419015-50419067)
chr4 (177-228)||(1179178-1179229)
chr4 (177-228)||(10780712-10780763)
chr4 (177-228)||(10974321-10974372)
chr4 (177-228)||(14801735-14801786)
chr4 (177-228)||(23613308-23613359)
chr4 (176-234)||(36009185-36009244)
chr4 (177-228)||(48528484-48528535)
chr4 (179-234)||(49879208-49879263)
chr4 (181-228)||(54086698-54086745)
chr4 (178-228)||(7452181-7452231)
chr4 (180-226)||(15508052-15508098)
chr4 (176-226)||(24411728-24411778)
chr4 (176-226)||(51692551-51692601)
chr4 (177-226)||(11448109-11448158)
chr4 (179-228)||(15507674-15507723)
chr4 (177-234)||(18831348-18831405)
chr4 (181-234)||(37248577-37248630)
chr4 (181-234)||(37976156-37976209)
chr4 (179-228)||(52909254-52909303)
chr4 (178-234)||(147319-147375)
chr4 (178-226)||(23613658-23613706)
chr4 (180-228)||(44967071-44967119)
chr4 (176-228)||(55867492-55867544)
chr4 (177-228)||(5368946-5368997)
chr4 (178-233)||(5369240-5369295)
chr4 (177-228)||(35028376-35028427)
chr4 (177-228)||(53702176-53702227)
chr4 (178-229)||(55866111-55866162)
chr4 (180-234)||(17356294-17356348)
chr4 (180-234)||(24411360-24411414)
chr4 (180-234)||(37248238-37248292)
chr4 (177-223)||(53129505-53129551)
chr4 (180-226)||(53701814-53701860)
chr4 (181-226)||(11108220-11108265)
chr4 (181-234)||(43155532-43155585)
chr4 (180-228)||(16006171-16006219)
chr4 (176-224)||(34765378-34765426)
chr4 (176-228)||(41582445-41582497)
chr4 (176-228)||(52909631-52909683)
chr4 (166-226)||(54435477-54435537)
[»] chr8 (41 HSPs)
chr8 (176-232)||(16388581-16388637)
chr8 (176-234)||(23698616-23698674)
chr8 (176-234)||(39072013-39072071)
chr8 (167-228)||(12198939-12199000)
chr8 (167-228)||(12443367-12443428)
chr8 (173-234)||(23663540-23663601)
chr8 (180-228)||(9065667-9065715)
chr8 (180-228)||(34177348-34177396)
chr8 (178-234)||(39071676-39071732)
chr8 (178-228)||(4406038-4406088)
chr8 (176-230)||(13186435-13186489)
chr8 (174-228)||(23663892-23663946)
chr8 (176-226)||(33357496-33357546)
chr8 (177-230)||(13186059-13186112)
chr8 (177-234)||(20386802-20386859)
chr8 (178-230)||(16388902-16388954)
chr8 (178-234)||(20385568-20385624)
chr8 (178-234)||(38956044-38956100)
chr8 (177-228)||(4995034-4995085)
chr8 (177-228)||(8316652-8316703)
chr8 (177-228)||(8316966-8317017)
chr8 (181-228)||(38862941-38862988)
chr8 (176-234)||(1425051-1425109)
chr8 (176-234)||(12273225-12273283)
chr8 (177-226)||(31608526-31608575)
chr8 (180-225)||(40317966-40318011)
chr8 (176-228)||(35756582-35756633)
chr8 (182-234)||(36186105-36186157)
chr8 (177-225)||(40318345-40318393)
chr8 (176-226)||(4994655-4994705)
chr8 (178-228)||(31608891-31608941)
chr8 (178-228)||(34685635-34685685)
chr8 (176-222)||(36186448-36186494)
chr8 (178-228)||(42803596-42803646)
chr8 (179-228)||(1425399-1425448)
chr8 (174-226)||(7294098-7294149)
chr8 (176-228)||(7313383-7313435)
chr8 (180-228)||(12199284-12199332)
chr8 (180-228)||(12272920-12272968)
chr8 (180-228)||(12443712-12443760)
chr8 (176-228)||(34060487-34060539)
[»] chr1 (60 HSPs)
chr1 (181-228)||(46163033-46163080)
chr1 (168-226)||(4960530-4960588)
chr1 (176-234)||(47999464-47999522)
chr1 (178-234)||(6367562-6367618)
chr1 (176-228)||(19515817-19515869)
chr1 (176-228)||(23209705-23209757)
chr1 (176-228)||(30711705-30711757)
chr1 (176-228)||(36694280-36694332)
chr1 (176-228)||(36710381-36710433)
chr1 (177-228)||(17661851-17661902)
chr1 (177-232)||(17662224-17662279)
chr1 (176-226)||(1841838-1841888)
chr1 (178-228)||(24009575-24009625)
chr1 (178-228)||(34464449-34464499)
chr1 (176-234)||(35473629-35473687)
chr1 (176-234)||(37578190-37578248)
chr1 (176-234)||(43759194-43759252)
chr1 (177-234)||(6367934-6367991)
chr1 (179-228)||(13300282-13300331)
chr1 (177-234)||(25647883-25647940)
chr1 (169-234)||(26024764-26024829)
chr1 (176-228)||(5734008-5734060)
chr1 (176-228)||(34464827-34464879)
chr1 (178-234)||(34850437-34850493)
chr1 (176-228)||(35152341-35152393)
chr1 (177-229)||(37578569-37578621)
chr1 (180-228)||(40210748-40210796)
chr1 (178-234)||(40772507-40772563)
chr1 (176-228)||(41098731-41098783)
chr1 (176-234)||(183563-183622)
chr1 (181-228)||(40435348-40435395)
chr1 (179-226)||(48692394-48692441)
chr1 (178-228)||(14879336-14879386)
chr1 (176-230)||(19322890-19322944)
chr1 (179-225)||(35152711-35152757)
chr1 (178-228)||(46899061-46899111)
chr1 (177-226)||(7231629-7231678)
chr1 (176-225)||(13914066-13914115)
chr1 (181-234)||(17692557-17692610)
chr1 (177-226)||(19017628-19017677)
chr1 (177-234)||(40772831-40772888)
chr1 (176-225)||(42533022-42533071)
chr1 (178-234)||(183221-183277)
chr1 (178-226)||(30711327-30711375)
chr1 (178-234)||(34849011-34849067)
chr1 (176-228)||(36694626-36694678)
chr1 (176-228)||(36710727-36710779)
chr1 (180-228)||(42248475-42248523)
chr1 (178-234)||(47999123-47999179)
chr1 (178-225)||(6518177-6518224)
chr1 (177-228)||(7821331-7821382)
chr1 (177-228)||(26024422-26024473)
chr1 (185-228)||(49723104-49723147)
chr1 (178-228)||(32917638-32917688)
chr1 (177-234)||(1103833-1103890)
chr1 (177-230)||(5735087-5735140)
chr1 (177-234)||(7820953-7821010)
chr1 (179-228)||(13914445-13914494)
chr1 (176-228)||(19018007-19018059)
chr1 (177-225)||(48779500-48779548)
[»] chr7 (46 HSPs)
chr7 (176-234)||(27396967-27397025)
chr7 (176-234)||(28469380-28469438)
chr7 (176-226)||(42731799-42731849)
chr7 (176-230)||(45010980-45011034)
chr7 (176-228)||(5457285-5457337)
chr7 (177-228)||(24389163-24389214)
chr7 (177-228)||(27396628-27396679)
chr7 (177-228)||(28469009-28469060)
chr7 (176-234)||(48788801-48788859)
chr7 (177-234)||(2640177-2640234)
chr7 (177-234)||(6571012-6571069)
chr7 (177-234)||(17102019-17102076)
chr7 (177-234)||(19204488-19204545)
chr7 (179-228)||(23181372-23181421)
chr7 (178-234)||(10935794-10935850)
chr7 (176-228)||(17102367-17102419)
chr7 (179-234)||(6253472-6253527)
chr7 (177-228)||(6253818-6253869)
chr7 (177-228)||(10936172-10936223)
chr7 (177-224)||(32053142-32053189)
chr7 (181-232)||(42019971-42020022)
chr7 (176-234)||(20426702-20426760)
chr7 (176-234)||(28105499-28105557)
chr7 (178-228)||(40380062-40380112)
chr7 (178-228)||(42362450-42362500)
chr7 (178-228)||(42731419-42731469)
chr7 (177-234)||(22871649-22871706)
chr7 (181-234)||(27992080-27992133)
chr7 (177-226)||(29141556-29141605)
chr7 (177-234)||(32298776-32298833)
chr7 (183-228)||(40379774-40379819)
chr7 (179-228)||(42019598-42019647)
chr7 (178-234)||(18670235-18670291)
chr7 (180-228)||(24388821-24388869)
chr7 (176-228)||(29144360-29144412)
chr7 (178-226)||(37657217-37657265)
chr7 (178-234)||(43123175-43123231)
chr7 (179-234)||(32299077-32299132)
chr7 (178-227)||(2640557-2640607)
chr7 (178-228)||(13386125-13386175)
chr7 (176-226)||(17886870-17886920)
chr7 (177-226)||(27991738-27991787)
chr7 (177-230)||(47945356-47945409)
chr7 (177-230)||(47950786-47950839)
chr7 (170-234)||(18086281-18086345)
chr7 (176-228)||(22828196-22828247)
[»] chr6 (26 HSPs)
chr6 (176-234)||(30726131-30726189)
chr6 (176-234)||(33647323-33647381)
chr6 (177-234)||(3059628-3059685)
chr6 (177-234)||(33517906-33517963)
chr6 (177-228)||(11393182-11393233)
chr6 (176-234)||(30337447-30337505)
chr6 (177-230)||(17734195-17734248)
chr6 (177-234)||(21628085-21628142)
chr6 (173-226)||(30804241-30804294)
chr6 (181-234)||(33517537-33517590)
chr6 (176-228)||(681106-681158)
chr6 (176-228)||(8090305-8090357)
chr6 (175-234)||(20651007-20651066)
chr6 (176-234)||(12081008-12081066)
chr6 (176-234)||(13379854-13379912)
chr6 (176-234)||(26463177-26463235)
chr6 (177-226)||(21627712-21627761)
chr6 (180-228)||(11434804-11434852)
chr6 (178-234)||(30337790-30337846)
chr6 (177-228)||(679865-679916)
chr6 (180-226)||(12080638-12080684)
chr6 (178-228)||(15115339-15115389)
chr6 (178-228)||(15116610-15116660)
chr6 (181-227)||(22617886-22617932)
chr6 (176-228)||(12408549-12408601)
chr6 (178-234)||(26464571-26464627)
[»] scaffold0707 (1 HSPs)
scaffold0707 (177-234)||(6451-6508)
[»] chr2 (40 HSPs)
chr2 (177-228)||(3555249-3555300)
chr2 (175-234)||(11163395-11163454)
chr2 (177-228)||(34447812-34447863)
chr2 (177-228)||(36755466-36755517)
chr2 (177-228)||(45556425-45556476)
chr2 (176-226)||(39423895-39423945)
chr2 (177-230)||(2318886-2318939)
chr2 (177-234)||(15848087-15848144)
chr2 (176-229)||(15848465-15848518)
chr2 (177-234)||(16099396-16099453)
chr2 (177-234)||(36382499-36382556)
chr2 (177-234)||(37895346-37895403)
chr2 (174-234)||(6657874-6657934)
chr2 (178-234)||(10713095-10713151)
chr2 (181-228)||(6588686-6588733)
chr2 (179-230)||(36755094-36755145)
chr2 (170-228)||(25231226-25231284)
chr2 (178-228)||(39423515-39423565)
chr2 (176-234)||(44045374-44045432)
chr2 (182-228)||(44713799-44713845)
chr2 (175-228)||(34448173-34448226)
chr2 (185-234)||(39498317-39498366)
chr2 (167-228)||(39498657-39498718)
chr2 (177-234)||(45556111-45556168)
chr2 (178-234)||(6658219-6658275)
chr2 (178-226)||(21370582-21370630)
chr2 (178-234)||(25230102-25230158)
chr2 (176-228)||(36382159-36382211)
chr2 (180-228)||(36480096-36480144)
chr2 (178-228)||(6307096-6307145)
chr2 (178-228)||(9076445-9076495)
chr2 (178-228)||(30729621-30729671)
chr2 (181-231)||(37895722-37895772)
chr2 (176-234)||(44714133-44714190)
chr2 (189-234)||(13692592-13692637)
chr2 (180-228)||(36479719-36479768)
chr2 (177-234)||(44044113-44044170)
chr2 (180-228)||(10712725-10712773)
chr2 (178-234)||(11163054-11163110)
chr2 (178-234)||(16099055-16099111)
[»] scaffold0075 (2 HSPs)
scaffold0075 (176-225)||(14427-14476)
scaffold0075 (178-228)||(14768-14818)
[»] scaffold0031 (2 HSPs)
scaffold0031 (178-234)||(68965-69021)
scaffold0031 (178-234)||(69337-69393)
[»] scaffold0007 (2 HSPs)
scaffold0007 (177-233)||(2114-2170)
scaffold0007 (176-234)||(1767-1825)
[»] scaffold0005 (1 HSPs)
scaffold0005 (177-228)||(37941-37992)
[»] scaffold0020 (2 HSPs)
scaffold0020 (176-234)||(139670-139728)
scaffold0020 (181-234)||(140013-140066)
[»] scaffold0775 (1 HSPs)
scaffold0775 (176-226)||(4960-5010)
[»] scaffold0128 (1 HSPs)
scaffold0128 (181-234)||(19860-19913)


Alignment Details
Target: chr3 (Bit Score: 161; Significance: 7e-86; HSPs: 30)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 161; E-Value: 7e-86
Query Start/End: Original strand, 1 - 177
Target Start/End: Original strand, 7756169 - 7756345
Alignment:
Q  1 tcttcgttcacgtatttctttcagttccgtcgaccatcttccagcgaccctcttccgacatcgactcacctttttgagtcaacggagtcacaacttttag 100  Q
    ||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  7756169 tcttcgttcacgtatttctttcagttccgtcgaccttcttccaccgaccctcttccgccatcgactcacctttttgagtcaacggagtcacaacttttag 7756268  T
Q  101 ggtttctacttttttggtaagattgcccattttcttcttctttgttttccacagaggccttttattcattctttcta 177  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  7756269 ggtttctacttttttggtaagattgcccattttcttcttctttgttttccacacaggccttttattcattctttcta 7756345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 178 - 234
Target Start/End: Complemental strand, 36418116 - 36418060
Alignment:
Q  178 ggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 234  Q
    ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||    
T  36418116 ggcttaaatatgtatttcatccttgtaattaggggtcgtttaaaaattggttcctgt 36418060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 176 - 230
Target Start/End: Complemental strand, 33689809 - 33689755
Alignment:
Q  176 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttc 230  Q
    ||||||||||||||||||||||| ||| ||| |||||||||||||||||||||||    
T  33689809 taggcttaaatatgtatttcatctttgcaattaggggtcgtttaaaaattggttc 33689755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 176 - 229
Target Start/End: Complemental strand, 40033886 - 40033833
Alignment:
Q  176 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggtt 229  Q
    ||||||||||||||||||||||| ||| ||| ||||||||||||||||||||||    
T  40033886 taggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtt 40033833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 177 - 228
Target Start/End: Original strand, 33689381 - 33689432
Alignment:
Q  177 aggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 228  Q
    |||||||||||||||||||||| ||| ||| |||||||||||||||||||||    
T  33689381 aggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggt 33689432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 172 - 234
Target Start/End: Complemental strand, 3850561 - 3850499
Alignment:
Q  172 tttctaggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 234  Q
    ||||| |||||||||||||||||||||  || ||| ||||||||||||||||||||| |||||    
T  3850561 tttcttggcttaaatatgtatttcatccctgcaattaggggtcgtttaaaaattggtccctgt 3850499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 178 - 228
Target Start/End: Complemental strand, 9294386 - 9294336
Alignment:
Q  178 ggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 228  Q
    ||||||||||||||||||||| ||| ||| |||||||||||||||||||||    
T  9294386 ggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggt 9294336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 178 - 228
Target Start/End: Original strand, 40758147 - 40758197
Alignment:
Q  178 ggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 228  Q
    ||||||||||||||||||||| ||| ||| |||||||||||||||||||||    
T  40758147 ggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggt 40758197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 177 - 234
Target Start/End: Complemental strand, 19741321 - 19741264
Alignment:
Q  177 aggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 234  Q
    |||||||||||||||||| ||| ||| ||| ||||||||||||||||||||| |||||    
T  19741321 aggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgt 19741264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 176 - 228
Target Start/End: Complemental strand, 23458409 - 23458357
Alignment:
Q  176 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 228  Q
    ||||||||||||||||||||||| ||| ||| | |||||||||||||||||||    
T  23458409 taggcttaaatatgtatttcatccttgcaattatgggtcgtttaaaaattggt 23458357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 178 - 234
Target Start/End: Complemental strand, 34142646 - 34142590
Alignment:
Q  178 ggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 234  Q
    ||||||||||||||||| ||| ||| ||| ||||||||||||||||||||| |||||    
T  34142646 ggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgt 34142590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 176 - 228
Target Start/End: Complemental strand, 40758540 - 40758488
Alignment:
Q  176 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 228  Q
    ||||||||||||||||||||||| ||| ||| ||||||| |||||||||||||    
T  40758540 taggcttaaatatgtatttcatccttgcaattaggggtcatttaaaaattggt 40758488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 176 - 228
Target Start/End: Original strand, 42342789 - 42342841
Alignment:
Q  176 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 228  Q
    ||||||||||||||||||||||| ||  ||| |||||||||||||||||||||    
T  42342789 taggcttaaatatgtatttcatccttacaattaggggtcgtttaaaaattggt 42342841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 181 - 228
Target Start/End: Original strand, 36150530 - 36150577
Alignment:
Q  181 ttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 228  Q
    |||||||||||||||||| ||| ||| |||||||||||||||||||||    
T  36150530 ttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggt 36150577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 169 - 228
Target Start/End: Original strand, 41557999 - 41558058
Alignment:
Q  169 ttctttctaggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 228  Q
    |||||| ||||||||||||||||||||||  ||| ||| | |||||||||||||||||||    
T  41557999 ttctttttaggcttaaatatgtatttcattcttgcaattatgggtcgtttaaaaattggt 41558058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 181 - 228
Target Start/End: Original strand, 46474818 - 46474865
Alignment:
Q  181 ttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 228  Q
    |||||||||||||||||| ||| ||| |||||||||||||||||||||    
T  46474818 ttaaatatgtatttcatctttgcaattaggggtcgtttaaaaattggt 46474865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 176 - 234
Target Start/End: Original strand, 2796177 - 2796235
Alignment:
Q  176 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 234  Q
    ||||||||||||||||||| ||| ||| ||| ||||||| ||||||||||||| |||||    
T  2796177 taggcttaaatatgtatttgatccttgcaattaggggtcatttaaaaattggtccctgt 2796235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 176 - 234
Target Start/End: Original strand, 51993962 - 51994020
Alignment:
Q  176 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 234  Q
    ||||||||||||||||||| ||| ||| ||| || |||||||||||||||||| |||||    
T  51993962 taggcttaaatatgtatttgatctttgcaattagaggtcgtttaaaaattggtccctgt 51994020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 181 - 234
Target Start/End: Original strand, 36417691 - 36417744
Alignment:
Q  181 ttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 234  Q
    ||||| |||| ||||||| ||||||| ||||||||||||||||||||| |||||    
T  36417691 ttaaacatgtctttcatccttgtaattaggggtcgtttaaaaattggtccctgt 36417744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 181 - 226
Target Start/End: Complemental strand, 42343156 - 42343111
Alignment:
Q  181 ttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattg 226  Q
    |||||||||||||||||| ||||||| | |||||||||||||||||    
T  42343156 ttaaatatgtatttcatccttgtaattaagggtcgtttaaaaattg 42343111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 181 - 226
Target Start/End: Original strand, 53756747 - 53756792
Alignment:
Q  181 ttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattg 226  Q
    |||||||||||||||||| ||| ||| |||||||||||||||||||    
T  53756747 ttaaatatgtatttcatctttgcaattaggggtcgtttaaaaattg 53756792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 228
Target Start/End: Original strand, 9292245 - 9292293
Alignment:
Q  180 cttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 228  Q
    ||||||||||||||||||| ||| ||| |||| ||||||||||||||||    
T  9292245 cttaaatatgtatttcatccttgcaattagggatcgtttaaaaattggt 9292293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 177 - 228
Target Start/End: Complemental strand, 26464015 - 26463964
Alignment:
Q  177 aggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 228  Q
    |||||||||||||||||||||| ||| ||| || | ||||||||||||||||    
T  26464015 aggcttaaatatgtatttcatccttgcaattagagatcgtttaaaaattggt 26463964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 184 - 234
Target Start/End: Complemental strand, 9368723 - 9368673
Alignment:
Q  184 aatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 234  Q
    |||||||||||| || ||| ||| ||||||||||||||||||||| |||||    
T  9368723 aatatgtatttcgtccttgcaattaggggtcgtttaaaaattggtccctgt 9368673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 181 - 234
Target Start/End: Original strand, 21783403 - 21783454
Alignment:
Q  181 ttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 234  Q
    |||||||||||||||||| ||||||| | |||||||||  ||||||||||||||    
T  21783403 ttaaatatgtatttcatccttgtaattaagggtcgttt--aaattggttcctgt 21783454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 173 - 234
Target Start/End: Original strand, 19740918 - 19740979
Alignment:
Q  173 ttctaggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 234  Q
    |||||||||||||||||||||| ||   || ||| |||| |||||||||||||||| |||||    
T  19740918 ttctaggcttaaatatgtatttgattcatgcaattagggatcgtttaaaaattggtccctgt 19740979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 226
Target Start/End: Original strand, 26463635 - 26463680
Alignment:
Q  181 ttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattg 226  Q
    |||||||||||||||||| ||| ||| | |||||||||||||||||    
T  26463635 ttaaatatgtatttcatccttgcaattaagggtcgtttaaaaattg 26463680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 228
Target Start/End: Original strand, 35712045 - 35712094
Alignment:
Q  179 gcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 228  Q
    |||||||||||||||||||| ||| ||| |||| || |||||||||||||    
T  35712045 gcttaaatatgtatttcatccttgcaattagggatcatttaaaaattggt 35712094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 226
Target Start/End: Complemental strand, 46475205 - 46475160
Alignment:
Q  181 ttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattg 226  Q
    |||||||||||||||||| ||  ||| |||||||||||||||||||    
T  46475205 ttaaatatgtatttcatccttacaattaggggtcgtttaaaaattg 46475160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 228
Target Start/End: Complemental strand, 51994313 - 51994264
Alignment:
Q  179 gcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 228  Q
    |||||||||||||||| ||| ||| ||| |||| ||||||||||||||||    
T  51994313 gcttaaatatgtatttgatccttgcaattagggatcgtttaaaaattggt 51994264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 47; Significance: 7e-18; HSPs: 64)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 172 - 234
Target Start/End: Original strand, 20840527 - 20840589
Alignment:
Q  172 tttctaggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 234  Q
    ||||||||||||||||||||||||||| ||| ||| ||||||||||||||||||||| |||||    
T  20840527 tttctaggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtacctgt 20840589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 170 - 228
Target Start/End: Original strand, 28269414 - 28269472
Alignment:
Q  170 tctttctaggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 228  Q
    ||||| ||||||||||||||||||||||||||| ||| |||||||||||||||||||||    
T  28269414 tctttgtaggcttaaatatgtatttcatcattgcaattaggggtcgtttaaaaattggt 28269472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 176 - 234
Target Start/End: Original strand, 5993887 - 5993945
Alignment:
Q  176 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 234  Q
    ||||||||||||||||||||||| ||| ||| ||||||||||||||||||||| |||||    
T  5993887 taggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgt 5993945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 176 - 234
Target Start/End: Original strand, 14194421 - 14194479
Alignment:
Q  176 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 234  Q
    ||||||||||||||||||||||| ||| ||| ||||||||||||||||||||| |||||    
T  14194421 taggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgt 14194479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 177 - 230
Target Start/End: Original strand, 6150453 - 6150506
Alignment:
Q  177 aggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttc 230  Q
    |||||||||||||||||||||| ||| ||| |||||||||||||||||||||||    
T  6150453 aggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggttc 6150506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 176 - 228
Target Start/End: Complemental strand, 20814565 - 20814513
Alignment:
Q  176 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 228  Q
    ||||||||||||||||||||||| ||| ||| |||||||||||||||||||||    
T  20814565 taggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggt 20814513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 178 - 234
Target Start/End: Complemental strand, 35920612 - 35920556
Alignment:
Q  178 ggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 234  Q
    ||||||||||||||||||||||| | ||| ||||||||||||||||||||| |||||    
T  35920612 ggcttaaatatgtatttcatcatagcaattaggggtcgtttaaaaattggtccctgt 35920556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 181 - 228
Target Start/End: Complemental strand, 13362653 - 13362606
Alignment:
Q  181 ttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 228  Q
    |||||||||||||||||||||| ||| |||||||||||||||||||||    
T  13362653 ttaaatatgtatttcatcattgcaattaggggtcgtttaaaaattggt 13362606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 177 - 228
Target Start/End: Complemental strand, 16157284 - 16157233
Alignment:
Q  177 aggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 228  Q
    |||||||||||||||||||||| ||| ||| |||||||||||||||||||||    
T  16157284 aggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggt 16157233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 175 - 234
Target Start/End: Complemental strand, 35512545 - 35512486
Alignment:
Q  175 ctaggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 234  Q
    |||| ||||||||||||||||||| ||| ||| ||||||||||||||||||||| |||||    
T  35512545 ctagacttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgt 35512486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 176 - 234
Target Start/End: Original strand, 28770867 - 28770925
Alignment:
Q  176 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 234  Q
    ||||||||||||||||||| ||| ||| ||| ||||||||||||||||||||| |||||    
T  28770867 taggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgt 28770925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 178 - 228
Target Start/End: Complemental strand, 28771266 - 28771216
Alignment:
Q  178 ggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 228  Q
    ||||||||||||||||| ||| ||||||| |||||||||||||||||||||    
T  28771266 ggcttaaatatgtatttgatccttgtaattaggggtcgtttaaaaattggt 28771216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 177 - 234
Target Start/End: Original strand, 3528872 - 3528929
Alignment:
Q  177 aggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 234  Q
    |||||||||||||||||| ||| ||| ||| ||||||||||||||||||||| |||||    
T  3528872 aggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgt 3528929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 176 - 225
Target Start/End: Complemental strand, 6150850 - 6150801
Alignment:
Q  176 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaatt 225  Q
    ||||||||||||||||||||||| ||| ||| ||||||||||||||||||    
T  6150850 taggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaatt 6150801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 177 - 234
Target Start/End: Original strand, 11761748 - 11761805
Alignment:
Q  177 aggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 234  Q
    |||||||||||||||||| ||| ||| ||| ||||||||||||||||||||| |||||    
T  11761748 aggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgt 11761805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 177 - 234
Target Start/End: Complemental strand, 11762146 - 11762089
Alignment:
Q  177 aggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 234  Q
    |||||||||||||||||| ||| ||| ||| ||||||||||||||||||||| |||||    
T  11762146 aggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgt 11762089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 179 - 228
Target Start/End: Original strand, 18247087 - 18247136
Alignment:
Q  179 gcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 228  Q
    |||||||||||||||||||| ||| ||| |||||||||||||||||||||    
T  18247087 gcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggt 18247136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 177 - 234
Target Start/End: Original strand, 18670201 - 18670258
Alignment:
Q  177 aggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 234  Q
    |||||||||||||||||||||| ||| ||  ||||||||||||||||||||| |||||    
T  18670201 aggcttaaatatgtatttcatccttgcaagtaggggtcgtttaaaaattggtccctgt 18670258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 177 - 234
Target Start/End: Complemental strand, 21265571 - 21265514
Alignment:
Q  177 aggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 234  Q
    |||||||||||||||||||||| ||  ||| | |||||||||||||||||||||||||    
T  21265571 aggcttaaatatgtatttcatccttacaattaagggtcgtttaaaaattggttcctgt 21265514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 175 - 228
Target Start/End: Complemental strand, 38475430 - 38475377
Alignment:
Q  175 ctaggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 228  Q
    ||||||||||||||| |||||||| ||| ||| |||||||||||||||||||||    
T  38475430 ctaggcttaaatatgcatttcatccttgcaattaggggtcgtttaaaaattggt 38475377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 177 - 234
Target Start/End: Complemental strand, 39453728 - 39453671
Alignment:
Q  177 aggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 234  Q
    |||||||||||||||||||||| ||| ||| ||||||| ||||||||||||| |||||    
T  39453728 aggcttaaatatgtatttcatccttgcaattaggggtcatttaaaaattggtccctgt 39453671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 177 - 234
Target Start/End: Original strand, 42265734 - 42265791
Alignment:
Q  177 aggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 234  Q
    ||||||||||||||||||||||  || ||| ||||||||||||||||||||| |||||    
T  42265734 aggcttaaatatgtatttcatccctgcaattaggggtcgtttaaaaattggtccctgt 42265791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 178 - 234
Target Start/End: Complemental strand, 186847 - 186791
Alignment:
Q  178 ggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 234  Q
    ||||||||||||||||||||| ||| ||| || |||||||||||||||||| |||||    
T  186847 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtccctgt 186791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 178 - 234
Target Start/End: Complemental strand, 3529270 - 3529214
Alignment:
Q  178 ggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 234  Q
    ||||||||||||||||| ||| ||| ||| ||||||||||||||||||||| |||||    
T  3529270 ggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgt 3529214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 178 - 226
Target Start/End: Original strand, 5024019 - 5024067
Alignment:
Q  178 ggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattg 226  Q
    ||||||||||||||||||||| ||| ||| |||||||||||||||||||    
T  5024019 ggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattg 5024067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 176 - 228
Target Start/End: Complemental strand, 13963259 - 13963207
Alignment:
Q  176 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 228  Q
    ||||||||||||| ||||||||| ||||||| | |||||||||||||||||||    
T  13963259 taggcttaaatatatatttcatccttgtaattatgggtcgtttaaaaattggt 13963207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 178 - 234
Target Start/End: Complemental strand, 17202827 - 17202771
Alignment:
Q  178 ggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 234  Q
    ||||||||||||||||||||| ||| ||| ||||||||||||||||| ||| |||||    
T  17202827 ggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaatcggtccctgt 17202771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 180 - 228
Target Start/End: Original strand, 19892310 - 19892358
Alignment:
Q  180 cttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 228  Q
    ||||||||||||||||||| ||| ||| |||||||||||||||||||||    
T  19892310 cttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggt 19892358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 176 - 228
Target Start/End: Complemental strand, 20840867 - 20840815
Alignment:
Q  176 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 228  Q
    ||||||||||||||||||||||| ||  ||| |||||||||||||||||||||    
T  20840867 taggcttaaatatgtatttcatccttacaattaggggtcgtttaaaaattggt 20840815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 178 - 234
Target Start/End: Original strand, 27587148 - 27587204
Alignment:
Q  178 ggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 234  Q
    ||||||||||||||||| ||| ||| ||| ||||||||||||||||||||| |||||    
T  27587148 ggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgt 27587204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 176 - 228
Target Start/End: Original strand, 29646360 - 29646412
Alignment:
Q  176 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 228  Q
    ||||||||||||||||||| ||| ||||||| ||||||| |||||||||||||    
T  29646360 taggcttaaatatgtattttatccttgtaattaggggtcttttaaaaattggt 29646412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 180 - 228
Target Start/End: Original strand, 39453302 - 39453350
Alignment:
Q  180 cttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 228  Q
    ||||||||||||||||||| ||| ||| |||||||||||||||||||||    
T  39453302 cttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggt 39453350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 181 - 228
Target Start/End: Complemental strand, 5024443 - 5024396
Alignment:
Q  181 ttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 228  Q
    |||||||||||||||||| ||| ||| |||||||||||||||||||||    
T  5024443 ttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggt 5024396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 176 - 227
Target Start/End: Complemental strand, 14194852 - 14194801
Alignment:
Q  176 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattgg 227  Q
    |||||||||| |||| ||||||| ||||||| ||||||||||||||||||||    
T  14194852 taggcttaaaaatgtctttcatccttgtaattaggggtcgtttaaaaattgg 14194801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 177 - 228
Target Start/End: Complemental strand, 18247505 - 18247454
Alignment:
Q  177 aggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 228  Q
    |||||||||||||||||||||| ||| ||| ||||||||||||||| |||||    
T  18247505 aggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaatttggt 18247454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 177 - 228
Target Start/End: Complemental strand, 24547554 - 24547503
Alignment:
Q  177 aggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 228  Q
    |||||||||||||||||| ||| ||| ||| |||||||||||||||||||||    
T  24547554 aggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggt 24547503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 179 - 230
Target Start/End: Complemental strand, 38442494 - 38442443
Alignment:
Q  179 gcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttc 230  Q
    |||||||||||||||||||| ||| ||| ||||||||||||||||| |||||    
T  38442494 gcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaatgggttc 38442443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 181 - 228
Target Start/End: Complemental strand, 43159239 - 43159192
Alignment:
Q  181 ttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 228  Q
    |||||||||||||||||| ||| ||| |||||||||||||||||||||    
T  43159239 ttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggt 43159192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 176 - 234
Target Start/End: Original strand, 13962862 - 13962920
Alignment:
Q  176 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 234  Q
    ||||||||||||| ||||| ||| ||| ||| ||||||||||||||||||||| |||||    
T  13962862 taggcttaaatatatattttatccttgcaattaggggtcgtttaaaaattggtccctgt 13962920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 178 - 228
Target Start/End: Complemental strand, 27587543 - 27587493
Alignment:
Q  178 ggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 228  Q
    ||||||||||||||||| ||| ||| ||| |||||||||||||||||||||    
T  27587543 ggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggt 27587493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 176 - 226
Target Start/End: Original strand, 32242240 - 32242290
Alignment:
Q  176 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattg 226  Q
    |||| |||||||||||||||||| ||| ||| |||||||||||||||||||    
T  32242240 tagggttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattg 32242290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 176 - 234
Target Start/End: Original strand, 35512146 - 35512204
Alignment:
Q  176 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 234  Q
    |||| |||||||||||||||||| ||| ||| | ||||||||||||||||||| |||||    
T  35512146 taggtttaaatatgtatttcatccttgcaattaagggtcgtttaaaaattggtccctgt 35512204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 177 - 230
Target Start/End: Original strand, 5835622 - 5835675
Alignment:
Q  177 aggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttc 230  Q
    |||||||||||||||||||||  || |||| |||| ||||||||||||||||||    
T  5835622 aggcttaaatatgtatttcatttttttaattagggatcgtttaaaaattggttc 5835675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 183 - 228
Target Start/End: Complemental strand, 8322827 - 8322782
Alignment:
Q  183 aaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 228  Q
    |||||||||||||||| ||| ||| |||||||||||||||||||||    
T  8322827 aaatatgtatttcatccttgcaattaggggtcgtttaaaaattggt 8322782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 181 - 226
Target Start/End: Original strand, 11740690 - 11740735
Alignment:
Q  181 ttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattg 226  Q
    |||||||||||||||||| ||| ||| |||||||||||||||||||    
T  11740690 ttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattg 11740735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 179 - 224
Target Start/End: Complemental strand, 11741944 - 11741899
Alignment:
Q  179 gcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaat 224  Q
    |||||||||||||||||||| ||||||| ||||||| |||||||||    
T  11741944 gcttaaatatgtatttcatccttgtaattaggggtcatttaaaaat 11741899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 177 - 230
Target Start/End: Complemental strand, 16083372 - 16083319
Alignment:
Q  177 aggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttc 230  Q
    |||||||||||||||||||||| ||| ||| | || ||||||||||||||||||    
T  16083372 aggcttaaatatgtatttcatccttgcaattaaggatcgtttaaaaattggttc 16083319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 179 - 228
Target Start/End: Original strand, 16156856 - 16156905
Alignment:
Q  179 gcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 228  Q
    |||||||||||||||||||  ||| ||| |||||||||||||||||||||    
T  16156856 gcttaaatatgtatttcatacttgcaattaggggtcgtttaaaaattggt 16156905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 179 - 228
Target Start/End: Original strand, 35920229 - 35920278
Alignment:
Q  179 gcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 228  Q
    |||||||||||||||| |||||| |||| |||| ||||||||||||||||    
T  35920229 gcttaaatatgtatttgatcattttaattagggatcgtttaaaaattggt 35920278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 177 - 228
Target Start/End: Complemental strand, 6301970 - 6301921
Alignment:
Q  177 aggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 228  Q
    |||||||||||||||||||||  ||| ||| |||||||||||||||||||||    
T  6301970 aggcttaaatatgtatttcat--ttgcaattaggggtcgtttaaaaattggt 6301921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 173 - 225
Target Start/End: Complemental strand, 19518040 - 19517988
Alignment:
Q  173 ttctaggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaatt 225  Q
    ||||| |||||||||||||||||||| ||| ||| |||||| |||||||||||    
T  19518040 ttctaagcttaaatatgtatttcatccttgcaattaggggtagtttaaaaatt 19517988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 228
Target Start/End: Complemental strand, 19892734 - 19892686
Alignment:
Q  180 cttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 228  Q
    ||||||||||||||||||| ||| ||| || ||||||||||||||||||    
T  19892734 cttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggt 19892686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 176 - 228
Target Start/End: Original strand, 20814134 - 20814186
Alignment:
Q  176 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 228  Q
    ||||||||||||||||||||||| ||  ||| || ||||||||||||||||||    
T  20814134 taggcttaaatatgtatttcatccttacaattagaggtcgtttaaaaattggt 20814186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 176 - 224
Target Start/End: Complemental strand, 28269809 - 28269762
Alignment:
Q  176 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaat 224  Q
    ||||||||||||||||||||||| ||| ||| |||||||||||||||||    
T  28269809 taggcttaaatatgtatttcatc-ttgcaattaggggtcgtttaaaaat 28269762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 177 - 225
Target Start/End: Complemental strand, 32242670 - 32242622
Alignment:
Q  177 aggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaatt 225  Q
    |||||||||||||||||||||| ||| ||| |||||| |||||||||||    
T  32242670 aggcttaaatatgtatttcatccttgcaattaggggttgtttaaaaatt 32242622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 181 - 228
Target Start/End: Complemental strand, 11047861 - 11047814
Alignment:
Q  181 ttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 228  Q
    |||||||||||||||||| ||| ||  |||||||||||||||||||||    
T  11047861 ttaaatatgtatttcatccttgcaagtaggggtcgtttaaaaattggt 11047814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 177 - 228
Target Start/End: Original strand, 17202398 - 17202449
Alignment:
Q  177 aggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 228  Q
    |||||||||||| ||||||||| ||  ||| |||||||||||||||||||||    
T  17202398 aggcttaaatatatatttcatccttccaattaggggtcgtttaaaaattggt 17202449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 181 - 227
Target Start/End: Complemental strand, 21257586 - 21257540
Alignment:
Q  181 ttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattgg 227  Q
    ||||||||||||||||||  || ||| ||||||||||||||||||||    
T  21257586 ttaaatatgtatttcatccctgcaattaggggtcgtttaaaaattgg 21257540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 176 - 234
Target Start/End: Original strand, 24547175 - 24547233
Alignment:
Q  176 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 234  Q
    |||||||||||||||| || ||| ||| ||| |||||||||| |||||||||| |||||    
T  24547175 taggcttaaatatgtacttgatccttgcaattaggggtcgttaaaaaattggtccctgt 24547233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 176 - 234
Target Start/End: Original strand, 37991197 - 37991255
Alignment:
Q  176 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 234  Q
    |||||||||||||| | ||||||  || ||| ||||||||||||||||||||| |||||    
T  37991197 taggcttaaatatgaaattcatccctgcaattaggggtcgtttaaaaattggtccctgt 37991255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 234
Target Start/End: Complemental strand, 5835851 - 5835798
Alignment:
Q  181 ttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 234  Q
    |||||||||||||||||| ||| ||| ||| || ||||||||||||||| ||||    
T  5835851 ttaaatatgtatttcatccttgcaattaggagttgtttaaaaattggtttctgt 5835798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 226
Target Start/End: Complemental strand, 27937424 - 27937379
Alignment:
Q  181 ttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattg 226  Q
    |||||||||||||||||| ||| ||| | |||||||||||||||||    
T  27937424 ttaaatatgtatttcatccttgcaattatgggtcgtttaaaaattg 27937379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 177 - 225
Target Start/End: Original strand, 186419 - 186466
Alignment:
Q  177 aggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaatt 225  Q
    |||||||||||| ||||||||| ||| ||| ||||||||||||||||||    
T  186419 aggcttaaatatttatttcatc-ttgaaattaggggtcgtttaaaaatt 186466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 224
Target Start/End: Complemental strand, 37992714 - 37992670
Alignment:
Q  180 cttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaat 224  Q
    |||||||||||||||||||  || ||| |||||||||||||||||    
T  37992714 cttaaatatgtatttcatccatgcaattaggggtcgtttaaaaat 37992670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 47; Significance: 7e-18; HSPs: 66)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 180 - 234
Target Start/End: Complemental strand, 54087121 - 54087067
Alignment:
Q  180 cttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 234  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||| |||||    
T  54087121 cttaaatatgtatttcatcattgtaattaggggtcgtttaaaaattggtccctgt 54087067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 176 - 234
Target Start/End: Original strand, 35027996 - 35028054
Alignment:
Q  176 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 234  Q
    |||| |||||||||||||||||| ||| ||| |||||||||||||||||||||||||||    
T  35027996 taggtttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggttcctgt 35028054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 176 - 234
Target Start/End: Complemental strand, 51692949 - 51692891
Alignment:
Q  176 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 234  Q
    ||||||||||||||||||||||| ||| ||| ||||||||||||||||||||| |||||    
T  51692949 taggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgt 51692891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 173 - 234
Target Start/End: Original strand, 24349669 - 24349730
Alignment:
Q  173 ttctaggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 234  Q
    |||||||||||||||||||||| ||| ||| ||| ||||||||||||||||||||| |||||    
T  24349669 ttctaggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgt 24349730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 177 - 234
Target Start/End: Complemental strand, 46661343 - 46661286
Alignment:
Q  177 aggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 234  Q
    |||||||||||||||||||||| ||| ||| ||||||||||||||||||||| |||||    
T  46661343 aggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgt 46661286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 177 - 226
Target Start/End: Complemental strand, 53129935 - 53129886
Alignment:
Q  177 aggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattg 226  Q
    |||||||||||||||||||||| ||| |||||||||||||||||||||||    
T  53129935 aggcttaaatatgtatttcatccttgcaatcaggggtcgtttaaaaattg 53129886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 178 - 234
Target Start/End: Complemental strand, 18831745 - 18831689
Alignment:
Q  178 ggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 234  Q
    ||||||||||||||||||||| ||| ||| ||||||||||||||||||||| |||||    
T  18831745 ggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgt 18831689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 174 - 230
Target Start/End: Complemental strand, 34765812 - 34765756
Alignment:
Q  174 tctaggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttc 230  Q
    ||||||||||||||||||||| ||| ||| ||| |||||||||||||||||||||||    
T  34765812 tctaggcttaaatatgtattttatccttgcaattaggggtcgtttaaaaattggttc 34765756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 177 - 228
Target Start/End: Original strand, 1178056 - 1178107
Alignment:
Q  177 aggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 228  Q
    |||||||||||||||||||||| ||||||| || ||||||||||||||||||    
T  1178056 aggcttaaatatgtatttcatccttgtaattagaggtcgtttaaaaattggt 1178107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 176 - 234
Target Start/End: Original strand, 7451832 - 7451890
Alignment:
Q  176 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 234  Q
    ||||||||||||||||||| ||| ||| ||| ||||||||||||||||||||| |||||    
T  7451832 taggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgt 7451890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 176 - 234
Target Start/End: Original strand, 36008842 - 36008900
Alignment:
Q  176 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 234  Q
    ||||||||||||||||||| ||| ||||||| |||| |||||||||||||||| |||||    
T  36008842 taggcttaaatatgtatttgatccttgtaattagggatcgtttaaaaattggtccctgt 36008900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 176 - 226
Target Start/End: Complemental strand, 37976583 - 37976533
Alignment:
Q  176 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattg 226  Q
    ||||||||||||||||||||||||| | ||| |||||||||||||||||||    
T  37976583 taggcttaaatatgtatttcatcatggcaattaggggtcgtttaaaaattg 37976533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 176 - 234
Target Start/End: Complemental strand, 43155926 - 43155868
Alignment:
Q  176 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 234  Q
    ||||||||||||||||||| ||| || |||| ||||||||||||||||||||| |||||    
T  43155926 taggcttaaatatgtatttgatccttataattaggggtcgtttaaaaattggtccctgt 43155868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 176 - 234
Target Start/End: Original strand, 50418666 - 50418724
Alignment:
Q  176 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 234  Q
    ||||||||||||||||||| ||| ||| ||| ||||||||||||||||||||| |||||    
T  50418666 taggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgt 50418724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 177 - 234
Target Start/End: Complemental strand, 13058411 - 13058354
Alignment:
Q  177 aggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 234  Q
    |||||||||||||||||| ||| ||| ||| ||||||||||||||||||||| |||||    
T  13058411 aggcttaaatatgtatttgatccttgcaataaggggtcgtttaaaaattggtccctgt 13058354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 177 - 234
Target Start/End: Original strand, 17355924 - 17355981
Alignment:
Q  177 aggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 234  Q
    |||||||||||||||||||||| ||| ||| ||| |||||||||||||||||| ||||    
T  17355924 aggcttaaatatgtatttcatccttgcaattaggagtcgtttaaaaattggttgctgt 17355981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 177 - 234
Target Start/End: Original strand, 24711110 - 24711167
Alignment:
Q  177 aggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 234  Q
    |||||||||||||||||| ||| ||| ||| ||||||||||||||||||||| |||||    
T  24711110 aggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgt 24711167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 176 - 225
Target Start/End: Complemental strand, 35508670 - 35508621
Alignment:
Q  176 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaatt 225  Q
    ||||||||||||||||||| ||||||| ||| ||||||||||||||||||    
T  35508670 taggcttaaatatgtattttatcattgcaattaggggtcgtttaaaaatt 35508621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 176 - 228
Target Start/End: Complemental strand, 148185 - 148133
Alignment:
Q  176 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 228  Q
    |||||||||||||||||||||||  || ||| |||||||||||||||||||||    
T  148185 taggcttaaatatgtatttcatccctgcaattaggggtcgtttaaaaattggt 148133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 176 - 228
Target Start/End: Complemental strand, 10781914 - 10781862
Alignment:
Q  176 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 228  Q
    ||||||||||||||||||| ||| ||| ||| |||||||||||||||||||||    
T  10781914 taggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggt 10781862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 176 - 228
Target Start/End: Original strand, 13058035 - 13058087
Alignment:
Q  176 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 228  Q
    ||||||||||||||||||| ||| ||| ||| |||||||||||||||||||||    
T  13058035 taggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggt 13058087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 177 - 233
Target Start/End: Complemental strand, 24350861 - 24350805
Alignment:
Q  177 aggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctg 233  Q
    |||||||||||||||||| ||| ||| ||| ||||||||||||||||||||| ||||    
T  24350861 aggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctg 24350805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 176 - 228
Target Start/End: Complemental strand, 24711510 - 24711458
Alignment:
Q  176 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 228  Q
    ||||||||||||||||||| ||| ||| ||| |||||||||||||||||||||    
T  24711510 taggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggt 24711458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 176 - 228
Target Start/End: Complemental strand, 39539348 - 39539296
Alignment:
Q  176 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 228  Q
    ||||||||||||||||||||||| ||| ||| | |||||||||||||||||||    
T  39539348 taggcttaaatatgtatttcatccttgcaattaagggtcgtttaaaaattggt 39539296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 174 - 234
Target Start/End: Complemental strand, 44967470 - 44967410
Alignment:
Q  174 tctaggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 234  Q
    ||||||||||||||||||||| ||| ||| ||| || |||||||||||||||||| |||||    
T  44967470 tctaggcttaaatatgtatttgatccttgcaattagaggtcgtttaaaaattggtccctgt 44967410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 176 - 228
Target Start/End: Complemental strand, 50419067 - 50419015
Alignment:
Q  176 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 228  Q
    ||||||||||||||||||| ||| ||| ||| |||||||||||||||||||||    
T  50419067 taggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggt 50419015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 177 - 228
Target Start/End: Complemental strand, 1179229 - 1179178
Alignment:
Q  177 aggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 228  Q
    |||||||||||||||||| ||| ||| ||| |||||||||||||||||||||    
T  1179229 aggcttaaatatgtattttatctttgcaattaggggtcgtttaaaaattggt 1179178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 177 - 228
Target Start/End: Original strand, 10780712 - 10780763
Alignment:
Q  177 aggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 228  Q
    |||||||||||||||||| ||| ||| ||| |||||||||||||||||||||    
T  10780712 aggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggt 10780763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 177 - 228
Target Start/End: Original strand, 10974321 - 10974372
Alignment:
Q  177 aggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 228  Q
    |||||||||||||||||| ||| ||| ||| |||||||||||||||||||||    
T  10974321 aggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggt 10974372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 177 - 228
Target Start/End: Original strand, 14801735 - 14801786
Alignment:
Q  177 aggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 228  Q
    |||||||||||||||||||||| ||| ||| ||| |||||||||||||||||    
T  14801735 aggcttaaatatgtatttcatccttgcaattaggagtcgtttaaaaattggt 14801786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 177 - 228
Target Start/End: Original strand, 23613308 - 23613359
Alignment:
Q  177 aggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 228  Q
    |||||||||||||||||| ||| ||| ||| |||||||||||||||||||||    
T  23613308 aggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggt 23613359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 176 - 234
Target Start/End: Complemental strand, 36009244 - 36009185
Alignment:
Q  176 taggcttaaatatgtatttcatcattgtaatca-ggggtcgtttaaaaattggttcctgt 234  Q
    ||||||||||||||||||| ||| ||||||| | |||||||||||||||||||| |||||    
T  36009244 taggcttaaatatgtatttgatccttgtaattagggggtcgtttaaaaattggtccctgt 36009185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 177 - 228
Target Start/End: Original strand, 48528484 - 48528535
Alignment:
Q  177 aggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 228  Q
    |||||||||||||||||| ||| ||| ||| |||||||||||||||||||||    
T  48528484 aggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggt 48528535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 179 - 234
Target Start/End: Original strand, 49879208 - 49879263
Alignment:
Q  179 gcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 234  Q
    |||||||||||||||| ||| ||| ||| ||||||||||||||||||||| |||||    
T  49879208 gcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgt 49879263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 181 - 228
Target Start/End: Original strand, 54086698 - 54086745
Alignment:
Q  181 ttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 228  Q
    |||||||||||||||||| ||| ||| |||||||||||||||||||||    
T  54086698 ttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggt 54086745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 178 - 228
Target Start/End: Complemental strand, 7452231 - 7452181
Alignment:
Q  178 ggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 228  Q
    ||||||||||||||||| ||| ||| ||| |||||||||||||||||||||    
T  7452231 ggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggt 7452181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 180 - 226
Target Start/End: Complemental strand, 15508098 - 15508052
Alignment:
Q  180 cttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattg 226  Q
    ||||||||||||||||||| ||| ||| |||||||||||||||||||    
T  15508098 cttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattg 15508052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 176 - 226
Target Start/End: Complemental strand, 24411778 - 24411728
Alignment:
Q  176 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattg 226  Q
    ||||||||||||||||||||||| ||| ||| | |||||||||||||||||    
T  24411778 taggcttaaatatgtatttcatccttgcaattaagggtcgtttaaaaattg 24411728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 176 - 226
Target Start/End: Original strand, 51692551 - 51692601
Alignment:
Q  176 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattg 226  Q
    ||||||||||||||||||||||| ||| ||| || ||||||||||||||||    
T  51692551 taggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattg 51692601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 177 - 226
Target Start/End: Complemental strand, 11448158 - 11448109
Alignment:
Q  177 aggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattg 226  Q
    ||||||||||||||||||| ||  |||||| |||||||||||||||||||    
T  11448158 aggcttaaatatgtatttcgtccctgtaattaggggtcgtttaaaaattg 11448109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 179 - 228
Target Start/End: Original strand, 15507674 - 15507723
Alignment:
Q  179 gcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 228  Q
    |||||||||||||||||||| ||| ||| | |||||||||||||||||||    
T  15507674 gcttaaatatgtatttcatccttgcaattaagggtcgtttaaaaattggt 15507723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 177 - 234
Target Start/End: Original strand, 18831348 - 18831405
Alignment:
Q  177 aggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 234  Q
    |||||||||||||||||| ||| ||  ||| ||||||||||||||||||||| |||||    
T  18831348 aggcttaaatatgtatttgatccttacaattaggggtcgtttaaaaattggtccctgt 18831405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 181 - 234
Target Start/End: Complemental strand, 37248630 - 37248577
Alignment:
Q  181 ttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 234  Q
    |||||||||||||| ||| ||| ||| ||||||||||||||||||||| |||||    
T  37248630 ttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgt 37248577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 181 - 234
Target Start/End: Original strand, 37976156 - 37976209
Alignment:
Q  181 ttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 234  Q
    |||||||||||||||||| ||| ||| || ||||||||||||| ||||||||||    
T  37976156 ttaaatatgtatttcatccttgcaattagaggtcgtttaaaaactggttcctgt 37976209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 179 - 228
Target Start/End: Original strand, 52909254 - 52909303
Alignment:
Q  179 gcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 228  Q
    |||||||||||||||||||| ||| ||| |||||||||| ||||||||||    
T  52909254 gcttaaatatgtatttcatctttgcaattaggggtcgttcaaaaattggt 52909303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 178 - 234
Target Start/End: Original strand, 147319 - 147375
Alignment:
Q  178 ggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 234  Q
    |||||||||||||||||||||  |  ||| ||||||||||||||||||||| |||||    
T  147319 ggcttaaatatgtatttcatccctacaattaggggtcgtttaaaaattggtccctgt 147375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 178 - 226
Target Start/End: Complemental strand, 23613706 - 23613658
Alignment:
Q  178 ggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattg 226  Q
    ||||||||||||||||| ||| ||| ||| |||||||||||||||||||    
T  23613706 ggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattg 23613658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 228
Target Start/End: Original strand, 44967071 - 44967119
Alignment:
Q  180 cttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 228  Q
    ||||||||||||||| ||| ||| ||| |||||||||||||||||||||    
T  44967071 cttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggt 44967119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 176 - 228
Target Start/End: Complemental strand, 55867544 - 55867492
Alignment:
Q  176 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 228  Q
    ||||||||||||||||||| |||  || ||| |||||||||||||||||||||    
T  55867544 taggcttaaatatgtatttgatccctgcaattaggggtcgtttaaaaattggt 55867492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 177 - 228
Target Start/End: Original strand, 5368946 - 5368997
Alignment:
Q  177 aggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 228  Q
    |||||||||||||||||| ||| ||| ||| |||| ||||||||||||||||    
T  5368946 aggcttaaatatgtatttgatccttgcaattagggatcgtttaaaaattggt 5368997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 178 - 233
Target Start/End: Complemental strand, 5369295 - 5369240
Alignment:
Q  178 ggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctg 233  Q
    ||||||||||||||||| ||| || |||  ||||||||||||||||||||| ||||    
T  5369295 ggcttaaatatgtatttgatccttataagtaggggtcgtttaaaaattggtccctg 5369240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 177 - 228
Target Start/End: Complemental strand, 35028427 - 35028376
Alignment:
Q  177 aggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 228  Q
    |||||||||||||||||||||| ||| ||| ||||||  |||||||||||||    
T  35028427 aggcttaaatatgtatttcatccttgcaattaggggtattttaaaaattggt 35028376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 177 - 228
Target Start/End: Complemental strand, 53702227 - 53702176
Alignment:
Q  177 aggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 228  Q
    |||||||||||||||||||||| ||| ||| || ||| ||||||||||||||    
T  53702227 aggcttaaatatgtatttcatctttgcaattagaggttgtttaaaaattggt 53702176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 178 - 229
Target Start/End: Original strand, 55866111 - 55866162
Alignment:
Q  178 ggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggtt 229  Q
    |||||||||||||||||| ||  || ||| ||||||||||||||||||||||    
T  55866111 ggcttaaatatgtatttcgtccctgcaattaggggtcgtttaaaaattggtt 55866162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 234
Target Start/End: Complemental strand, 17356348 - 17356294
Alignment:
Q  180 cttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 234  Q
    ||||||||||||||||||| ||  ||| | ||||||||||||||||||| |||||    
T  17356348 cttaaatatgtatttcatccttccaattacgggtcgtttaaaaattggtccctgt 17356294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 234
Target Start/End: Original strand, 24411360 - 24411414
Alignment:
Q  180 cttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 234  Q
    ||||||||||||||||||| | | ||| |||||| |||||||||||||| |||||    
T  24411360 cttaaatatgtatttcatcctagcaattaggggtagtttaaaaattggtccctgt 24411414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 234
Target Start/End: Original strand, 37248238 - 37248292
Alignment:
Q  180 cttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 234  Q
    ||||||||||||||| | | ||| ||| ||||||||||||||||||||| |||||    
T  37248238 cttaaatatgtatttgaaccttgcaattaggggtcgtttaaaaattggtccctgt 37248292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 177 - 223
Target Start/End: Original strand, 53129505 - 53129551
Alignment:
Q  177 aggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaa 223  Q
    |||||||||||||||||| ||||||| ||| |||| |||||||||||    
T  53129505 aggcttaaatatgtattttatcattgcaattagggatcgtttaaaaa 53129551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 226
Target Start/End: Original strand, 53701814 - 53701860
Alignment:
Q  180 cttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattg 226  Q
    ||||||||| ||||||||| ||| ||| |||||||||||||||||||    
T  53701814 cttaaatatctatttcatccttgcaattaggggtcgtttaaaaattg 53701860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 226
Target Start/End: Complemental strand, 11108265 - 11108220
Alignment:
Q  181 ttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattg 226  Q
    |||||||||||||||||| ||| ||| |||| ||||||||||||||    
T  11108265 ttaaatatgtatttcatccttgcaattagggatcgtttaaaaattg 11108220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 234
Target Start/End: Original strand, 43155532 - 43155585
Alignment:
Q  181 ttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 234  Q
    |||||||||||||| ||| ||| ||| | ||||||||||||||||||| |||||    
T  43155532 ttaaatatgtatttgatccttgcaattaagggtcgtttaaaaattggtccctgt 43155585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 228
Target Start/End: Complemental strand, 16006219 - 16006171
Alignment:
Q  180 cttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 228  Q
    ||||||||||||||| ||  ||| ||| |||||||||||||||||||||    
T  16006219 cttaaatatgtatttgattcttgcaattaggggtcgtttaaaaattggt 16006171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 176 - 224
Target Start/End: Original strand, 34765378 - 34765426
Alignment:
Q  176 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaat 224  Q
    ||||||||||||||||||| ||| ||| ||| | |||||||||||||||    
T  34765378 taggcttaaatatgtattttatccttgcaattaagggtcgtttaaaaat 34765426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 176 - 228
Target Start/End: Original strand, 41582445 - 41582497
Alignment:
Q  176 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 228  Q
    ||||||| ||||||| |||||||  || ||||||||||| |||||||||||||    
T  41582445 taggctttaatatgtgtttcatccctgcaatcaggggtcatttaaaaattggt 41582497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 176 - 228
Target Start/End: Complemental strand, 52909683 - 52909631
Alignment:
Q  176 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 228  Q
    ||||||||||||||||||||||| ||| ||| | || || |||||||||||||    
T  52909683 taggcttaaatatgtatttcatccttgcaattatggatcatttaaaaattggt 52909631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 166 - 226
Target Start/End: Complemental strand, 54435537 - 54435477
Alignment:
Q  166 tcattctttctaggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattg 226  Q
    ||||| ||| |||||||||||||||||||| |  ||| ||| ||| |||||||||||||||    
T  54435537 tcattgtttttaggcttaaatatgtatttcgtgcttgcaattaggtgtcgtttaaaaattg 54435477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 45; Significance: 1e-16; HSPs: 41)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 176 - 232
Target Start/End: Original strand, 16388581 - 16388637
Alignment:
Q  176 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcct 232  Q
    ||||||||||||||||||||||| ||| ||| |||||||||||||||||||||||||    
T  16388581 taggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggttcct 16388637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 176 - 234
Target Start/End: Complemental strand, 23698674 - 23698616
Alignment:
Q  176 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 234  Q
    ||||||||||||||||||| ||| ||||||| ||||||||||||||||||||| |||||    
T  23698674 taggcttaaatatgtatttgatccttgtaattaggggtcgtttaaaaattggtccctgt 23698616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 176 - 234
Target Start/End: Complemental strand, 39072071 - 39072013
Alignment:
Q  176 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 234  Q
    ||||||||||||||||||||||| ||| ||||| ||||||||||||||||||| |||||    
T  39072071 taggcttaaatatgtatttcatccttgcaatcaagggtcgtttaaaaattggtccctgt 39072013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 167 - 228
Target Start/End: Original strand, 12198939 - 12199000
Alignment:
Q  167 cattctttctaggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 228  Q
    |||||||| ||||||||||||||||||| ||| ||| ||| |||||||||||||||||||||    
T  12198939 cattctttataggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggt 12199000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 167 - 228
Target Start/End: Original strand, 12443367 - 12443428
Alignment:
Q  167 cattctttctaggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 228  Q
    |||||||| ||||||||||||||||||| ||| ||| ||| |||||||||||||||||||||    
T  12443367 cattctttataggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggt 12443428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 173 - 234
Target Start/End: Original strand, 23663540 - 23663601
Alignment:
Q  173 ttctaggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 234  Q
    ||||||||||||||||| |||||||| ||| ||| ||||||||||||||||||||| |||||    
T  23663540 ttctaggcttaaatatgcatttcatccttgcaattaggggtcgtttaaaaattggtccctgt 23663601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 180 - 228
Target Start/End: Original strand, 9065667 - 9065715
Alignment:
Q  180 cttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 228  Q
    ||||||||||||||||||| ||||||| |||||||||||||||||||||    
T  9065667 cttaaatatgtatttcatctttgtaattaggggtcgtttaaaaattggt 9065715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 180 - 228
Target Start/End: Complemental strand, 34177396 - 34177348
Alignment:
Q  180 cttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 228  Q
    ||||||||||||||||||| ||||||| |||||||||||||||||||||    
T  34177396 cttaaatatgtatttcatctttgtaattaggggtcgtttaaaaattggt 34177348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 178 - 234
Target Start/End: Original strand, 39071676 - 39071732
Alignment:
Q  178 ggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 234  Q
    ||||||||||||||||||||| ||| ||| ||||||||||||||||||||| |||||    
T  39071676 ggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgt 39071732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 178 - 228
Target Start/End: Complemental strand, 4406088 - 4406038
Alignment:
Q  178 ggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 228  Q
    ||||||||||||||||||||| ||||||| |||||| ||||||||||||||    
T  4406088 ggcttaaatatgtatttcatccttgtaattaggggttgtttaaaaattggt 4406038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 176 - 230
Target Start/End: Complemental strand, 13186489 - 13186435
Alignment:
Q  176 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttc 230  Q
    ||||||||||||| ||||||||| ||| ||| |||||||||||||||||||||||    
T  13186489 taggcttaaatatatatttcatccttgcaattaggggtcgtttaaaaattggttc 13186435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 174 - 228
Target Start/End: Complemental strand, 23663946 - 23663892
Alignment:
Q  174 tctaggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 228  Q
    ||||||||||||||||||||| ||| ||| ||| |||||||||||||||||||||    
T  23663946 tctaggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggt 23663892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 176 - 226
Target Start/End: Original strand, 33357496 - 33357546
Alignment:
Q  176 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattg 226  Q
    ||||||||||||||||||||||| ||| ||| |||||||||||||||||||    
T  33357496 taggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattg 33357546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 177 - 230
Target Start/End: Original strand, 13186059 - 13186112
Alignment:
Q  177 aggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttc 230  Q
    |||||||||||||||||||||| ||| ||| |||| ||||||||||||||||||    
T  13186059 aggcttaaatatgtatttcatccttgcaattagggatcgtttaaaaattggttc 13186112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 177 - 234
Target Start/End: Complemental strand, 20386859 - 20386802
Alignment:
Q  177 aggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 234  Q
    |||||||||||||||||| ||| ||| ||| ||||||||||||||||||||| |||||    
T  20386859 aggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgt 20386802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 178 - 230
Target Start/End: Complemental strand, 16388954 - 16388902
Alignment:
Q  178 ggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttc 230  Q
    ||||||||||||||||||||| ||| ||| ||||||| |||||||||||||||    
T  16388954 ggcttaaatatgtatttcatccttgcaattaggggtcatttaaaaattggttc 16388902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 178 - 234
Target Start/End: Original strand, 20385568 - 20385624
Alignment:
Q  178 ggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 234  Q
    ||||||||||||||||| ||| ||| ||| ||||||||||||||||||||| |||||    
T  20385568 ggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgt 20385624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 178 - 234
Target Start/End: Complemental strand, 38956100 - 38956044
Alignment:
Q  178 ggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 234  Q
    ||||||||||||||||| ||| ||| ||| ||||||||||||||||||||| |||||    
T  38956100 ggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgt 38956044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 177 - 228
Target Start/End: Complemental strand, 4995085 - 4995034
Alignment:
Q  177 aggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 228  Q
    |||||||||||||||||||||| ||| ||| ||||||| |||||||||||||    
T  4995085 aggcttaaatatgtatttcatccttgcaattaggggtcatttaaaaattggt 4995034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 177 - 228
Target Start/End: Original strand, 8316652 - 8316703
Alignment:
Q  177 aggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 228  Q
    ||||||||||||| |||||||| ||| ||| |||||||||||||||||||||    
T  8316652 aggcttaaatatgcatttcatccttgcaattaggggtcgtttaaaaattggt 8316703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 177 - 228
Target Start/End: Complemental strand, 8317017 - 8316966
Alignment:
Q  177 aggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 228  Q
    |||||||||||||||||| ||| ||| ||| |||||||||||||||||||||    
T  8317017 aggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggt 8316966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 181 - 228
Target Start/End: Complemental strand, 38862988 - 38862941
Alignment:
Q  181 ttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 228  Q
    |||||||||||||||||| ||| ||| |||||||||||||||||||||    
T  38862988 ttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggt 38862941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 176 - 234
Target Start/End: Original strand, 1425051 - 1425109
Alignment:
Q  176 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 234  Q
    |||| |||||||||||||| ||| ||| ||| ||||||||||||||||||||| |||||    
T  1425051 taggtttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgt 1425109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 176 - 234
Target Start/End: Complemental strand, 12273283 - 12273225
Alignment:
Q  176 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 234  Q
    |||| |||||||||||||| ||| ||| ||| ||||||||||||||||||||| |||||    
T  12273283 taggtttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgt 12273225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 177 - 226
Target Start/End: Original strand, 31608526 - 31608575
Alignment:
Q  177 aggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattg 226  Q
    ||||||||| |||||||||||| ||||||| |||| ||||||||||||||    
T  31608526 aggcttaaacatgtatttcatccttgtaattagggatcgtttaaaaattg 31608575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 180 - 225
Target Start/End: Original strand, 40317966 - 40318011
Alignment:
Q  180 cttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaatt 225  Q
    ||||||||||||||||||| ||| ||| ||||||||||||||||||    
T  40317966 cttaaatatgtatttcatccttgcaattaggggtcgtttaaaaatt 40318011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 176 - 228
Target Start/End: Original strand, 35756582 - 35756633
Alignment:
Q  176 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 228  Q
    |||||||||||||||||||||||| || ||| ||||||| |||||||||||||    
T  35756582 taggcttaaatatgtatttcatca-tgcaattaggggtcatttaaaaattggt 35756633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 182 - 234
Target Start/End: Original strand, 36186105 - 36186157
Alignment:
Q  182 taaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 234  Q
    ||||||||||||||||| ||||||| ||||||| ||||||| ||||| |||||    
T  36186105 taaatatgtatttcatctttgtaattaggggtcttttaaaatttggtccctgt 36186157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 177 - 225
Target Start/End: Complemental strand, 40318393 - 40318345
Alignment:
Q  177 aggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaatt 225  Q
    |||||||||||||||||||||| ||| ||| |||||| |||||||||||    
T  40318393 aggcttaaatatgtatttcatccttgcaattaggggttgtttaaaaatt 40318345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 176 - 226
Target Start/End: Original strand, 4994655 - 4994705
Alignment:
Q  176 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattg 226  Q
    ||||||||||||||||||||||| ||| ||| |||| | ||||||||||||    
T  4994655 taggcttaaatatgtatttcatcgttgcaattagggattgtttaaaaattg 4994705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 178 - 228
Target Start/End: Complemental strand, 31608941 - 31608891
Alignment:
Q  178 ggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 228  Q
    |||||||||| |||||||||| ||| ||| | |||||||||||||||||||    
T  31608941 ggcttaaataagtatttcatccttgcaattaagggtcgtttaaaaattggt 31608891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 178 - 228
Target Start/End: Complemental strand, 34685685 - 34685635
Alignment:
Q  178 ggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 228  Q
    ||||||||||||||||| ||| ||| ||| |||| ||||||||||||||||    
T  34685685 ggcttaaatatgtattttatccttgcaattagggatcgtttaaaaattggt 34685635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 176 - 222
Target Start/End: Complemental strand, 36186494 - 36186448
Alignment:
Q  176 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaa 222  Q
    ||||||||||||||||||||||| ||| ||| | |||||||||||||    
T  36186494 taggcttaaatatgtatttcatccttgcaattaagggtcgtttaaaa 36186448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 178 - 228
Target Start/End: Complemental strand, 42803646 - 42803596
Alignment:
Q  178 ggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 228  Q
    ||||||||||||||||||||| ||| ||| ||  |||||||||||||||||    
T  42803646 ggcttaaatatgtatttcatccttgcaattagaagtcgtttaaaaattggt 42803596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 228
Target Start/End: Complemental strand, 1425448 - 1425399
Alignment:
Q  179 gcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 228  Q
    |||||||||| ||||| ||| ||||||| || ||||||||||||||||||    
T  1425448 gcttaaatatatatttgatccttgtaattagaggtcgtttaaaaattggt 1425399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 174 - 226
Target Start/End: Original strand, 7294098 - 7294149
Alignment:
Q  174 tctaggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattg 226  Q
    |||| |||||||||||||||||||| ||| ||| || ||||||||||||||||    
T  7294098 tctaagcttaaatatgtatttcatc-ttgcaattagaggtcgtttaaaaattg 7294149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 176 - 228
Target Start/End: Complemental strand, 7313435 - 7313383
Alignment:
Q  176 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 228  Q
    ||||||||||||||||||| |||  || ||  |||||||||||||||||||||    
T  7313435 taggcttaaatatgtatttgatccctgcaaataggggtcgtttaaaaattggt 7313383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 228
Target Start/End: Complemental strand, 12199332 - 12199284
Alignment:
Q  180 cttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 228  Q
    ||||||||||||||| ||| || |||| ||| |||||||||||||||||    
T  12199332 cttaaatatgtatttgatccttataattaggagtcgtttaaaaattggt 12199284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 228
Target Start/End: Original strand, 12272920 - 12272968
Alignment:
Q  180 cttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 228  Q
    ||||||||||||||| ||| ||| ||| |||| ||||||||||||||||    
T  12272920 cttaaatatgtatttgatccttgcaattagggatcgtttaaaaattggt 12272968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 228
Target Start/End: Complemental strand, 12443760 - 12443712
Alignment:
Q  180 cttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 228  Q
    ||||||||||||||| ||| || |||| ||| |||||||||||||||||    
T  12443760 cttaaatatgtatttgatccttataattaggagtcgtttaaaaattggt 12443712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 176 - 228
Target Start/End: Original strand, 34060487 - 34060539
Alignment:
Q  176 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 228  Q
    ||||||||||||||||||||||| ||| ||| |   |||||||||||||||||    
T  34060487 taggcttaaatatgtatttcatccttgcaattaaacgtcgtttaaaaattggt 34060539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 44; Significance: 4e-16; HSPs: 60)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 181 - 228
Target Start/End: Original strand, 46163033 - 46163080
Alignment:
Q  181 ttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 228  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||    
T  46163033 ttaaatatgtatttcatcattgtaattaggggtcgtttaaaaattggt 46163080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 168 - 226
Target Start/End: Original strand, 4960530 - 4960588
Alignment:
Q  168 attctttctaggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattg 226  Q
    |||||||||  |||||||||||||||||||||||| ||| |||||||||||||||||||    
T  4960530 attctttcttagcttaaatatgtatttcatcattgcaattaggggtcgtttaaaaattg 4960588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 176 - 234
Target Start/End: Complemental strand, 47999522 - 47999464
Alignment:
Q  176 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 234  Q
    ||||||||||||||||||| ||| ||||||| ||||||||||||||||||||| |||||    
T  47999522 taggcttaaatatgtatttgatccttgtaattaggggtcgtttaaaaattggtccctgt 47999464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 178 - 234
Target Start/End: Original strand, 6367562 - 6367618
Alignment:
Q  178 ggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 234  Q
    ||||||||||||||||||||| ||| ||| ||||||||||||||||||||| |||||    
T  6367562 ggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgt 6367618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 176 - 228
Target Start/End: Original strand, 19515817 - 19515869
Alignment:
Q  176 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 228  Q
    ||||||||||||||||||||||| ||| ||| |||||||||||||||||||||    
T  19515817 taggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggt 19515869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 176 - 228
Target Start/End: Complemental strand, 23209757 - 23209705
Alignment:
Q  176 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 228  Q
    ||||||||||||||||||||||| ||| ||| |||||||||||||||||||||    
T  23209757 taggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggt 23209705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 176 - 228
Target Start/End: Complemental strand, 30711757 - 30711705
Alignment:
Q  176 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 228  Q
    ||||||||||||||||||||||| ||| ||| |||||||||||||||||||||    
T  30711757 taggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggt 30711705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 176 - 228
Target Start/End: Original strand, 36694280 - 36694332
Alignment:
Q  176 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 228  Q
    ||||||||||||||||||||||| ||| ||| |||||||||||||||||||||    
T  36694280 taggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggt 36694332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 176 - 228
Target Start/End: Original strand, 36710381 - 36710433
Alignment:
Q  176 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 228  Q
    ||||||||||||||||||||||| ||| ||| |||||||||||||||||||||    
T  36710381 taggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggt 36710433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 177 - 228
Target Start/End: Original strand, 17661851 - 17661902
Alignment:
Q  177 aggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 228  Q
    |||||||||||||||||||||| ||| ||| |||||||||||||||||||||    
T  17661851 aggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggt 17661902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 177 - 232
Target Start/End: Complemental strand, 17662279 - 17662224
Alignment:
Q  177 aggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcct 232  Q
    |||||||||||||||||||||| ||| |||  ||||||||||||||||||||||||    
T  17662279 aggcttaaatatgtatttcatccttgcaatttggggtcgtttaaaaattggttcct 17662224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 176 - 226
Target Start/End: Complemental strand, 1841888 - 1841838
Alignment:
Q  176 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattg 226  Q
    |||| |||||||||||||||||| ||||||| |||||||||||||||||||    
T  1841888 taggtttaaatatgtatttcatccttgtaatgaggggtcgtttaaaaattg 1841838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 178 - 228
Target Start/End: Original strand, 24009575 - 24009625
Alignment:
Q  178 ggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 228  Q
    ||||||||||||||||||||| ||| ||| |||||||||||||||||||||    
T  24009575 ggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggt 24009625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 178 - 228
Target Start/End: Original strand, 34464449 - 34464499
Alignment:
Q  178 ggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 228  Q
    ||||||||||||||||||||| ||| ||| |||||||||||||||||||||    
T  34464449 ggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggt 34464499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 176 - 234
Target Start/End: Original strand, 35473629 - 35473687
Alignment:
Q  176 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 234  Q
    ||||||||||||||||||| ||| ||| ||| ||||||||||||||||||||| |||||    
T  35473629 taggcttaaatatgtatttaatccttgcaattaggggtcgtttaaaaattggtccctgt 35473687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 176 - 234
Target Start/End: Original strand, 37578190 - 37578248
Alignment:
Q  176 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 234  Q
    |||| |||||||||||||||||| ||| ||| ||||||||||||||||||||| |||||    
T  37578190 taggtttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgt 37578248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 176 - 234
Target Start/End: Complemental strand, 43759252 - 43759194
Alignment:
Q  176 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 234  Q
    ||||||||||||||||||||||| ||| ||| ||||||||||||||||| ||| |||||    
T  43759252 taggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaatcggtccctgt 43759194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 177 - 234
Target Start/End: Complemental strand, 6367991 - 6367934
Alignment:
Q  177 aggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 234  Q
    |||||||||||||||||||||| ||| ||| | ||||||||||||||||||| |||||    
T  6367991 aggcttaaatatgtatttcatccttgcaattaagggtcgtttaaaaattggtccctgt 6367934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 179 - 228
Target Start/End: Complemental strand, 13300331 - 13300282
Alignment:
Q  179 gcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 228  Q
    |||||||||||||||||||||||| ||| ||| |||||||||||||||||    
T  13300331 gcttaaatatgtatttcatcattgcaattaggcgtcgtttaaaaattggt 13300282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 177 - 234
Target Start/End: Original strand, 25647883 - 25647940
Alignment:
Q  177 aggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 234  Q
    |||||||||||||||||| ||| ||| ||| ||||||||||||||||||||| |||||    
T  25647883 aggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgt 25647940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 169 - 234
Target Start/End: Complemental strand, 26024829 - 26024764
Alignment:
Q  169 ttctttctaggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 234  Q
    |||||| | ||||||||||||||||| ||| ||| ||| ||||||||||||||||||||| |||||    
T  26024829 ttctttatgggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgt 26024764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 176 - 228
Target Start/End: Original strand, 5734008 - 5734060
Alignment:
Q  176 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 228  Q
    |||||||||||||||||||| || ||| ||| |||||||||||||||||||||    
T  5734008 taggcttaaatatgtatttcgtccttgcaattaggggtcgtttaaaaattggt 5734060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 176 - 228
Target Start/End: Complemental strand, 34464879 - 34464827
Alignment:
Q  176 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 228  Q
    ||||||||||||||||||||||| ||| ||| |||||| ||||||||||||||    
T  34464879 taggcttaaatatgtatttcatccttgcaattaggggttgtttaaaaattggt 34464827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 178 - 234
Target Start/End: Complemental strand, 34850493 - 34850437
Alignment:
Q  178 ggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 234  Q
    ||||||||||||||||| ||| ||| ||| ||||||||||||||||||||| |||||    
T  34850493 ggcttaaatatgtatttaatccttgcaattaggggtcgtttaaaaattggtccctgt 34850437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 176 - 228
Target Start/End: Original strand, 35152341 - 35152393
Alignment:
Q  176 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 228  Q
    ||||||||||||||||||||||| ||| ||| || ||||||||||||||||||    
T  35152341 taggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggt 35152393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 177 - 229
Target Start/End: Complemental strand, 37578621 - 37578569
Alignment:
Q  177 aggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggtt 229  Q
    |||||||||||||||||||||| ||| |||  |||||||||||||||||||||    
T  37578621 aggcttaaatatgtatttcatccttgcaattgggggtcgtttaaaaattggtt 37578569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 180 - 228
Target Start/End: Complemental strand, 40210796 - 40210748
Alignment:
Q  180 cttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 228  Q
    ||||||||||||||||||||||| ||| ||||| |||||||||||||||    
T  40210796 cttaaatatgtatttcatcattgcaattaggggccgtttaaaaattggt 40210748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 178 - 234
Target Start/End: Original strand, 40772507 - 40772563
Alignment:
Q  178 ggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 234  Q
    ||||||||||||||||||||| ||| ||| | ||||||||||||||||||| |||||    
T  40772507 ggcttaaatatgtatttcatccttgcaattatgggtcgtttaaaaattggtccctgt 40772563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 176 - 228
Target Start/End: Original strand, 41098731 - 41098783
Alignment:
Q  176 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 228  Q
    ||||||||||||||||||||||  ||| ||| |||||||||||||||||||||    
T  41098731 taggcttaaatatgtatttcattcttgcaattaggggtcgtttaaaaattggt 41098783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 176 - 234
Target Start/End: Complemental strand, 183622 - 183563
Alignment:
Q  176 taggcttaaatatgtatttcatcattgtaatca-ggggtcgtttaaaaattggttcctgt 234  Q
    ||||||||||||||||||| ||| ||||||| | |||||||||||||||||||| |||||    
T  183622 taggcttaaatatgtatttgatccttgtaattagggggtcgtttaaaaattggtccctgt 183563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 181 - 228
Target Start/End: Original strand, 40435348 - 40435395
Alignment:
Q  181 ttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 228  Q
    |||||||||||||||||| ||| ||| |||||||||||||||||||||    
T  40435348 ttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggt 40435395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 179 - 226
Target Start/End: Complemental strand, 48692441 - 48692394
Alignment:
Q  179 gcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattg 226  Q
    |||||||||||||||| ||||||||||| || ||||||||||||||||    
T  48692441 gcttaaatatgtatttgatcattgtaattagaggtcgtttaaaaattg 48692394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 178 - 228
Target Start/End: Complemental strand, 14879386 - 14879336
Alignment:
Q  178 ggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 228  Q
    ||||||||||| ||||||||||||| ||| |||| ||||||||||||||||    
T  14879386 ggcttaaatatatatttcatcattgcaattagggatcgtttaaaaattggt 14879336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 176 - 230
Target Start/End: Original strand, 19322890 - 19322944
Alignment:
Q  176 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttc 230  Q
    ||||||||||||||||||||||| || |||| | |||||||||||||||| ||||    
T  19322890 taggcttaaatatgtatttcatccttataattacgggtcgtttaaaaattcgttc 19322944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 179 - 225
Target Start/End: Complemental strand, 35152757 - 35152711
Alignment:
Q  179 gcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaatt 225  Q
    |||||||||||||||||||| ||| ||| ||||||||||||||||||    
T  35152757 gcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaatt 35152711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 178 - 228
Target Start/End: Original strand, 46899061 - 46899111
Alignment:
Q  178 ggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 228  Q
    |||||||||||||||||||||  || ||| |||||||||||||||||||||    
T  46899061 ggcttaaatatgtatttcatccatgcaattaggggtcgtttaaaaattggt 46899111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 177 - 226
Target Start/End: Complemental strand, 7231678 - 7231629
Alignment:
Q  177 aggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattg 226  Q
    |||||||||||||||||| ||| ||||||| ||| |||||||||||||||    
T  7231678 aggcttaaatatgtattttatccttgtaattaggagtcgtttaaaaattg 7231629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 176 - 225
Target Start/End: Original strand, 13914066 - 13914115
Alignment:
Q  176 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaatt 225  Q
    ||||||||||| ||||||||||| ||| ||| ||||||||||||||||||    
T  13914066 taggcttaaatgtgtatttcatccttgcaattaggggtcgtttaaaaatt 13914115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 181 - 234
Target Start/End: Complemental strand, 17692610 - 17692557
Alignment:
Q  181 ttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 234  Q
    |||||||||||||||||| ||| ||| ||||||||||||||||| ||| |||||    
T  17692610 ttaaatatgtatttcatccttgcaattaggggtcgtttaaaaatcggtccctgt 17692557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 177 - 226
Target Start/End: Original strand, 19017628 - 19017677
Alignment:
Q  177 aggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattg 226  Q
    |||||||||||||||||||||| ||| ||| |||||| ||||||||||||    
T  19017628 aggcttaaatatgtatttcatccttgcaattaggggttgtttaaaaattg 19017677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 177 - 234
Target Start/End: Complemental strand, 40772888 - 40772831
Alignment:
Q  177 aggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 234  Q
    |||||||||||||||||||||| ||| ||| ||||||||||| ||||| ||| |||||    
T  40772888 aggcttaaatatgtatttcatccttgcaattaggggtcgtttgaaaatcggtccctgt 40772831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 176 - 225
Target Start/End: Original strand, 42533022 - 42533071
Alignment:
Q  176 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaatt 225  Q
    |||| |||||||||||||||||| ||| ||| ||||||||||||||||||    
T  42533022 taggtttaaatatgtatttcatccttgcaattaggggtcgtttaaaaatt 42533071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 178 - 234
Target Start/End: Original strand, 183221 - 183277
Alignment:
Q  178 ggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 234  Q
    ||||||||||||||||| ||| ||  ||| ||||||||||||||||||||| |||||    
T  183221 ggcttaaatatgtatttgatccttacaattaggggtcgtttaaaaattggtccctgt 183277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 178 - 226
Target Start/End: Original strand, 30711327 - 30711375
Alignment:
Q  178 ggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattg 226  Q
    ||||||||||||||||||||| ||| ||| |||||| ||||||||||||    
T  30711327 ggcttaaatatgtatttcatccttgcaattaggggttgtttaaaaattg 30711375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 178 - 234
Target Start/End: Original strand, 34849011 - 34849067
Alignment:
Q  178 ggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 234  Q
    ||||||||||||||||| ||| ||| ||| ||||||| ||||||||||||| |||||    
T  34849011 ggcttaaatatgtatttaatccttgcaattaggggtcttttaaaaattggtccctgt 34849067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 176 - 228
Target Start/End: Complemental strand, 36694678 - 36694626
Alignment:
Q  176 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 228  Q
    ||||||||||||||||||||||| ||| ||| ||| || ||||||||||||||    
T  36694678 taggcttaaatatgtatttcatccttgcaattaggtgttgtttaaaaattggt 36694626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 176 - 228
Target Start/End: Complemental strand, 36710779 - 36710727
Alignment:
Q  176 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 228  Q
    ||||||||||||||||||||||| ||| ||| ||| || ||||||||||||||    
T  36710779 taggcttaaatatgtatttcatccttgcaattaggtgttgtttaaaaattggt 36710727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 228
Target Start/End: Original strand, 42248475 - 42248523
Alignment:
Q  180 cttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 228  Q
    ||||||||||||||||||| ||| ||| || ||||||||||||||||||    
T  42248475 cttaaatatgtatttcatccttgcaattagtggtcgtttaaaaattggt 42248523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 178 - 234
Target Start/End: Original strand, 47999123 - 47999179
Alignment:
Q  178 ggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 234  Q
    ||||||||||||||||| ||| ||| ||| |||| |||||||||||||||| |||||    
T  47999123 ggcttaaatatgtatttgatccttgcaattagggatcgtttaaaaattggtccctgt 47999179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 178 - 225
Target Start/End: Complemental strand, 6518224 - 6518177
Alignment:
Q  178 ggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaatt 225  Q
    ||||||||||| ||||||||| ||| ||| ||||||||||||||||||    
T  6518224 ggcttaaatatatatttcatccttgcaattaggggtcgtttaaaaatt 6518177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 177 - 228
Target Start/End: Complemental strand, 7821382 - 7821331
Alignment:
Q  177 aggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 228  Q
    ||||||||||||| |||||||||||| ||| |  ||||||||||||||||||    
T  7821382 aggcttaaatatgcatttcatcattgcaattaaaggtcgtttaaaaattggt 7821331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 177 - 228
Target Start/End: Original strand, 26024422 - 26024473
Alignment:
Q  177 aggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 228  Q
    |||||||||||||||||| ||  ||| ||| |||||||||||||||||||||    
T  26024422 aggcttaaatatgtatttgattcttgcaattaggggtcgtttaaaaattggt 26024473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 185 - 228
Target Start/End: Complemental strand, 49723147 - 49723104
Alignment:
Q  185 atatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 228  Q
    |||||||||||||| ||| ||| |||||||||||||||||||||    
T  49723147 atatgtatttcatccttgcaattaggggtcgtttaaaaattggt 49723104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 178 - 228
Target Start/End: Complemental strand, 32917688 - 32917638
Alignment:
Q  178 ggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 228  Q
    ||||||||||||||||||||  ||| ||| | |||||||||||||||||||    
T  32917688 ggcttaaatatgtatttcattcttgcaattaagggtcgtttaaaaattggt 32917638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 234
Target Start/End: Complemental strand, 1103890 - 1103833
Alignment:
Q  177 aggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 234  Q
    |||||||||||| ||||||||| ||| ||| |  |||||||||||||||||| |||||    
T  1103890 aggcttaaatatatatttcatccttgcaattaaaggtcgtttaaaaattggtccctgt 1103833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 230
Target Start/End: Complemental strand, 5735140 - 5735087
Alignment:
Q  177 aggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttc 230  Q
    ||||||||||||||||||||||  || ||| |||  ||||||||||||||||||    
T  5735140 aggcttaaatatgtatttcatccctgcaattaggaatcgtttaaaaattggttc 5735087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 234
Target Start/End: Original strand, 7820953 - 7821010
Alignment:
Q  177 aggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 234  Q
    |||||||||||||||||||||| ||| ||| ||||||| ||||| |||| || |||||    
T  7820953 aggcttaaatatgtatttcatccttgcaattaggggtcctttaataattagtccctgt 7821010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 228
Target Start/End: Complemental strand, 13914494 - 13914445
Alignment:
Q  179 gcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 228  Q
    |||||||||||||||||||| ||| ||| || ||| ||||||||||||||    
T  13914494 gcttaaatatgtatttcatccttgcaattagaggttgtttaaaaattggt 13914445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 176 - 228
Target Start/End: Complemental strand, 19018059 - 19018007
Alignment:
Q  176 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 228  Q
    ||||||||||||||||||| ||| ||| ||| |  ||||||||||||||||||    
T  19018059 taggcttaaatatgtattttatccttgcaattacaggtcgtttaaaaattggt 19018007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 177 - 225
Target Start/End: Complemental strand, 48779548 - 48779500
Alignment:
Q  177 aggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaatt 225  Q
    |||||||||||||||||||||| ||| ||| ||| |||| |||||||||    
T  48779548 aggcttaaatatgtatttcatccttgcaattaggagtcgcttaaaaatt 48779500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 46)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 176 - 234
Target Start/End: Complemental strand, 27397025 - 27396967
Alignment:
Q  176 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 234  Q
    ||||||||||||||||||||||| ||| ||| ||||||||||||||||||||| |||||    
T  27397025 taggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgt 27396967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 176 - 234
Target Start/End: Complemental strand, 28469438 - 28469380
Alignment:
Q  176 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 234  Q
    ||||||||||||||||||||||| ||| ||| ||||||||||||||||||||| |||||    
T  28469438 taggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgt 28469380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 176 - 226
Target Start/End: Complemental strand, 42731849 - 42731799
Alignment:
Q  176 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattg 226  Q
    ||||||||||||||||||||||| ||||||| |||||||||||||||||||    
T  42731849 taggcttaaatatgtatttcatccttgtaattaggggtcgtttaaaaattg 42731799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 176 - 230
Target Start/End: Complemental strand, 45011034 - 45010980
Alignment:
Q  176 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttc 230  Q
    ||||||||||||||||||||||| ||| ||| |||||||||||||||||||||||    
T  45011034 taggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggttc 45010980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 176 - 228
Target Start/End: Complemental strand, 5457337 - 5457285
Alignment:
Q  176 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 228  Q
    ||||||||||||||||||||||| ||| ||| |||||||||||||||||||||    
T  5457337 taggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggt 5457285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 177 - 228
Target Start/End: Complemental strand, 24389214 - 24389163
Alignment:
Q  177 aggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 228  Q
    |||||||||||||||||||||| ||| ||| |||||||||||||||||||||    
T  24389214 aggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggt 24389163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 177 - 228
Target Start/End: Original strand, 27396628 - 27396679
Alignment:
Q  177 aggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 228  Q
    |||||||||||||||||||||| ||||||| ||||| |||||||||||||||    
T  27396628 aggcttaaatatgtatttcatccttgtaattaggggccgtttaaaaattggt 27396679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 177 - 228
Target Start/End: Original strand, 28469009 - 28469060
Alignment:
Q  177 aggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 228  Q
    |||||||||||||||||||||| ||| ||| |||||||||||||||||||||    
T  28469009 aggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggt 28469060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 176 - 234
Target Start/End: Original strand, 48788801 - 48788859
Alignment:
Q  176 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 234  Q
    ||||||||||||||||||||||  ||| ||| ||||||||||||||||||||| |||||    
T  48788801 taggcttaaatatgtatttcattcttgcaattaggggtcgtttaaaaattggtccctgt 48788859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 177 - 234
Target Start/End: Original strand, 2640177 - 2640234
Alignment:
Q  177 aggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 234  Q
    |||||||||||||||||||||| ||  ||| ||||||||||||||||||||| |||||    
T  2640177 aggcttaaatatgtatttcatccttacaattaggggtcgtttaaaaattggtacctgt 2640234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 177 - 234
Target Start/End: Original strand, 6571012 - 6571069
Alignment:
Q  177 aggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 234  Q
    |||||||||||||||||| ||| ||| ||| ||||||||||||||||||||| |||||    
T  6571012 aggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgt 6571069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 177 - 234
Target Start/End: Original strand, 17102019 - 17102076
Alignment:
Q  177 aggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 234  Q
    |||||||||||||||||| ||| ||| ||| ||||||||||||||||||||| |||||    
T  17102019 aggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgt 17102076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 177 - 234
Target Start/End: Original strand, 19204488 - 19204545
Alignment:
Q  177 aggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 234  Q
    |||||||||||||||||| ||| ||| ||| ||||||||||||||||||||| |||||    
T  19204488 aggcttaaatatgtatttgatccttgaaattaggggtcgtttaaaaattggtccctgt 19204545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 179 - 228
Target Start/End: Complemental strand, 23181421 - 23181372
Alignment:
Q  179 gcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 228  Q
    |||||||||||||||||||||||| ||| |||||||||||||| ||||||    
T  23181421 gcttaaatatgtatttcatcattgcaattaggggtcgtttaaatattggt 23181372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 178 - 234
Target Start/End: Original strand, 10935794 - 10935850
Alignment:
Q  178 ggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 234  Q
    ||||||||| ||||||||||| ||| ||| ||||||||||||||||||||| |||||    
T  10935794 ggcttaaatgtgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgt 10935850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 176 - 228
Target Start/End: Complemental strand, 17102419 - 17102367
Alignment:
Q  176 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 228  Q
    ||||||||||||||||||| ||| ||| ||| |||||||||||||||||||||    
T  17102419 taggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggt 17102367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 179 - 234
Target Start/End: Original strand, 6253472 - 6253527
Alignment:
Q  179 gcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 234  Q
    |||||||||||||||| ||| ||| ||| ||||||||||||||||||||| |||||    
T  6253472 gcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgt 6253527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 177 - 228
Target Start/End: Complemental strand, 6253869 - 6253818
Alignment:
Q  177 aggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 228  Q
    |||||||||||||||||| ||| ||| ||| |||||||||||||||||||||    
T  6253869 aggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggt 6253818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 177 - 228
Target Start/End: Complemental strand, 10936223 - 10936172
Alignment:
Q  177 aggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 228  Q
    |||||||||||||||||||||| ||| ||| |||||| ||||||||||||||    
T  10936223 aggcttaaatatgtatttcatccttgcaattaggggttgtttaaaaattggt 10936172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 177 - 224
Target Start/End: Original strand, 32053142 - 32053189
Alignment:
Q  177 aggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaat 224  Q
    |||||||||||||||||||||| ||||||| | |||||||||||||||    
T  32053142 aggcttaaatatgtatttcatccttgtaattatgggtcgtttaaaaat 32053189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 181 - 232
Target Start/End: Complemental strand, 42020022 - 42019971
Alignment:
Q  181 ttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcct 232  Q
    |||||||||||||||||| ||| ||| |||||| ||||||||||||||||||    
T  42020022 ttaaatatgtatttcatccttgcaattaggggttgtttaaaaattggttcct 42019971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 176 - 234
Target Start/End: Complemental strand, 20426760 - 20426702
Alignment:
Q  176 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 234  Q
    |||||||||||||||||||||||  || ||| || |||||||||||||||||| |||||    
T  20426760 taggcttaaatatgtatttcatccctgcaattagaggtcgtttaaaaattggtccctgt 20426702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 176 - 234
Target Start/End: Original strand, 28105499 - 28105557
Alignment:
Q  176 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 234  Q
    ||||||||||||||||||||||| ||| ||| | |||||||||||||||| || |||||    
T  28105499 taggcttaaatatgtatttcatccttgcaattaagggtcgtttaaaaatttgtccctgt 28105557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 178 - 228
Target Start/End: Complemental strand, 40380112 - 40380062
Alignment:
Q  178 ggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 228  Q
    ||||||||||||||||||||| ||| ||| ||| |||||||||||||||||    
T  40380112 ggcttaaatatgtatttcatccttgcaattaggagtcgtttaaaaattggt 40380062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 178 - 228
Target Start/End: Original strand, 42362450 - 42362500
Alignment:
Q  178 ggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 228  Q
    ||||||||||||||||||||| ||| ||| ||| |||||||||||||||||    
T  42362450 ggcttaaatatgtatttcatccttgcaattaggtgtcgtttaaaaattggt 42362500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 178 - 228
Target Start/End: Original strand, 42731419 - 42731469
Alignment:
Q  178 ggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 228  Q
    ||||||||||||||| ||||| ||| ||| |||||||||||||||||||||    
T  42731419 ggcttaaatatgtatctcatccttgcaattaggggtcgtttaaaaattggt 42731469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 177 - 234
Target Start/End: Complemental strand, 22871706 - 22871649
Alignment:
Q  177 aggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 234  Q
    |||||||||||||||||| ||| ||| ||| ||||||| ||||||||||||| |||||    
T  22871706 aggcttaaatatgtatttgatccttgcaattaggggtcatttaaaaattggtccctgt 22871649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 181 - 234
Target Start/End: Complemental strand, 27992133 - 27992080
Alignment:
Q  181 ttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 234  Q
    |||||||||||||| ||| ||| ||| ||||||||||||||||||||| |||||    
T  27992133 ttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgt 27992080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 177 - 226
Target Start/End: Complemental strand, 29141605 - 29141556
Alignment:
Q  177 aggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattg 226  Q
    |||||||||||||||||||||| ||| ||| || ||||||||||||||||    
T  29141605 aggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattg 29141556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 177 - 234
Target Start/End: Original strand, 32298776 - 32298833
Alignment:
Q  177 aggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 234  Q
    |||||||||||||||||| ||| ||| ||| |||||||||||||||| |||| |||||    
T  32298776 aggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaactggtccctgt 32298833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 183 - 228
Target Start/End: Original strand, 40379774 - 40379819
Alignment:
Q  183 aaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 228  Q
    |||||||||||||||| ||| ||| |||||||||||||||||||||    
T  40379774 aaatatgtatttcatccttgcaattaggggtcgtttaaaaattggt 40379819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 179 - 228
Target Start/End: Original strand, 42019598 - 42019647
Alignment:
Q  179 gcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 228  Q
    |||||||||||||||||||| ||| ||| | |||||||||||||||||||    
T  42019598 gcttaaatatgtatttcatccttgcaattaagggtcgtttaaaaattggt 42019647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 178 - 234
Target Start/End: Complemental strand, 18670291 - 18670235
Alignment:
Q  178 ggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 234  Q
    ||||||||||||||||| ||| ||| ||| |||||||||||||||| |||| |||||    
T  18670291 ggcttaaatatgtatttaatccttgcaattaggggtcgtttaaaaaatggtccctgt 18670235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 228
Target Start/End: Original strand, 24388821 - 24388869
Alignment:
Q  180 cttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 228  Q
    ||||||||||||||||||| ||| ||| | |||||||||||||||||||    
T  24388821 cttaaatatgtatttcatccttgcaattatgggtcgtttaaaaattggt 24388869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 176 - 228
Target Start/End: Complemental strand, 29144412 - 29144360
Alignment:
Q  176 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 228  Q
    |||||||||||||||||||| ||  || ||| |||||||||||||||||||||    
T  29144412 taggcttaaatatgtatttcgtccctgcaattaggggtcgtttaaaaattggt 29144360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 178 - 226
Target Start/End: Complemental strand, 37657265 - 37657217
Alignment:
Q  178 ggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattg 226  Q
    ||||||||||||||||||||| ||| ||| |||| ||||||||||||||    
T  37657265 ggcttaaatatgtatttcatccttgcaattagggatcgtttaaaaattg 37657217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 178 - 234
Target Start/End: Original strand, 43123175 - 43123231
Alignment:
Q  178 ggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 234  Q
    |||||||||||||||||| ||  || ||| ||||||||||||||||||||| |||||    
T  43123175 ggcttaaatatgtatttcgtccctgcaattaggggtcgtttaaaaattggtccctgt 43123231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 179 - 234
Target Start/End: Complemental strand, 32299132 - 32299077
Alignment:
Q  179 gcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 234  Q
    |||||||||||||||| ||| ||| ||| ||| ||||||||||||||||| |||||    
T  32299132 gcttaaatatgtatttgatccttgcaattaggagtcgtttaaaaattggtccctgt 32299077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 178 - 227
Target Start/End: Complemental strand, 2640607 - 2640557
Alignment:
Q  178 ggcttaaat-atgtatttcatcattgtaatcaggggtcgtttaaaaattgg 227  Q
    ||||||||| |||||||||||| || |||| ||||||||||||||||||||    
T  2640607 ggcttaaattatgtatttcatccttataattaggggtcgtttaaaaattgg 2640557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 178 - 228
Target Start/End: Complemental strand, 13386175 - 13386125
Alignment:
Q  178 ggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 228  Q
    ||||||||||||||||| ||  ||| ||| |||||||||||||||||||||    
T  13386175 ggcttaaatatgtatttaatacttgcaattaggggtcgtttaaaaattggt 13386125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 176 - 226
Target Start/End: Complemental strand, 17886920 - 17886870
Alignment:
Q  176 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattg 226  Q
    ||||||||||||||||||||||| ||| ||| |||| || |||||||||||    
T  17886920 taggcttaaatatgtatttcatccttgcaattagggatcatttaaaaattg 17886870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 226
Target Start/End: Original strand, 27991738 - 27991787
Alignment:
Q  177 aggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattg 226  Q
    |||||||||||||||||| ||| ||| ||| |||||||||||| ||||||    
T  27991738 aggcttaaatatgtatttgatccttgcaattaggggtcgtttagaaattg 27991787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 230
Target Start/End: Original strand, 47945356 - 47945409
Alignment:
Q  177 aggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttc 230  Q
    ||||| |||||||||||||||| ||| |||  ||| ||||||||||||||||||    
T  47945356 aggctcaaatatgtatttcatcgttgcaattggggatcgtttaaaaattggttc 47945409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 230
Target Start/End: Original strand, 47950786 - 47950839
Alignment:
Q  177 aggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttc 230  Q
    ||||| |||||||||||||||| ||| |||  ||| ||||||||||||||||||    
T  47950786 aggctcaaatatgtatttcatcgttgcaattggggatcgtttaaaaattggttc 47950839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 170 - 234
Target Start/End: Original strand, 18086281 - 18086345
Alignment:
Q  170 tctttctaggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 234  Q
    ||||||||||||| ||||||| |||  || ||| ||| ||| ||||||||||||||||| |||||    
T  18086281 tctttctaggctttaatatgtgtttagtccttgcaattaggagtcgtttaaaaattggtccctgt 18086345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 176 - 228
Target Start/End: Complemental strand, 22828247 - 22828196
Alignment:
Q  176 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 228  Q
    |||||||||| |||| ||||||| ||||||| ||||||| |||||||||||||    
T  22828247 taggcttaaa-atgtgtttcatccttgtaattaggggtcatttaaaaattggt 22828196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 176 - 234
Target Start/End: Complemental strand, 30726189 - 30726131
Alignment:
Q  176 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 234  Q
    ||||||||||||||||||||||| ||| ||| ||||||||||||||||||||| |||||    
T  30726189 taggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgt 30726131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 176 - 234
Target Start/End: Complemental strand, 33647381 - 33647323
Alignment:
Q  176 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 234  Q
    ||||||||||||||||||||||| ||| ||| ||||||||||||||||||||| |||||    
T  33647381 taggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgt 33647323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 177 - 234
Target Start/End: Complemental strand, 3059685 - 3059628
Alignment:
Q  177 aggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 234  Q
    |||||||||||||||||||||| ||| ||| ||||||||||||||||||||| |||||    
T  3059685 aggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgt 3059628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 177 - 234
Target Start/End: Complemental strand, 33517963 - 33517906
Alignment:
Q  177 aggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 234  Q
    |||||||||||||||||||||| ||| ||| ||||||||||||||||||||| |||||    
T  33517963 aggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgt 33517906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 177 - 228
Target Start/End: Complemental strand, 11393233 - 11393182
Alignment:
Q  177 aggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 228  Q
    |||||||| ||||||||||||| ||||||| |||||||||||||||||||||    
T  11393233 aggcttaagtatgtatttcatctttgtaattaggggtcgtttaaaaattggt 11393182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 176 - 234
Target Start/End: Original strand, 30337447 - 30337505
Alignment:
Q  176 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 234  Q
    ||||||||||||||||||| ||| ||| ||| ||||||||||||||||||||| |||||    
T  30337447 taggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgt 30337505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 177 - 230
Target Start/End: Original strand, 17734195 - 17734248
Alignment:
Q  177 aggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttc 230  Q
    |||||||||||||||||| ||| ||| ||| |||||||||||||||||||||||    
T  17734195 aggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggttc 17734248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 177 - 234
Target Start/End: Complemental strand, 21628142 - 21628085
Alignment:
Q  177 aggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 234  Q
    |||||||||||||||||||||| ||| ||| |||||||| |||||||||||| |||||    
T  21628142 aggcttaaatatgtatttcatccttgcaattaggggtcgcttaaaaattggtccctgt 21628085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 173 - 226
Target Start/End: Complemental strand, 30804294 - 30804241
Alignment:
Q  173 ttctaggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattg 226  Q
    ||||||| |||||||||||||||||| ||| ||| |||||||||||||||||||    
T  30804294 ttctaggattaaatatgtatttcatccttgcaattaggggtcgtttaaaaattg 30804241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 181 - 234
Target Start/End: Original strand, 33517537 - 33517590
Alignment:
Q  181 ttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 234  Q
    |||||||||||||||||| ||||||| |||| |||||||||||||||| |||||    
T  33517537 ttaaatatgtatttcatccttgtaattagggatcgtttaaaaattggtccctgt 33517590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 176 - 228
Target Start/End: Complemental strand, 681158 - 681106
Alignment:
Q  176 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 228  Q
    ||||||||||||||||||| ||| ||| ||| |||||||||||||||||||||    
T  681158 taggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggt 681106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 176 - 228
Target Start/End: Complemental strand, 8090357 - 8090305
Alignment:
Q  176 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 228  Q
    |||||||||||||||||| |||| ||| ||| |||||||||||||||||||||    
T  8090357 taggcttaaatatgtattacatccttgcaattaggggtcgtttaaaaattggt 8090305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 175 - 234
Target Start/End: Original strand, 20651007 - 20651066
Alignment:
Q  175 ctaggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 234  Q
    |||||||||||||||||||| |||  || ||| |||| ||||||||||||||||||||||    
T  20651007 ctaggcttaaatatgtatttgatccctgcaattagggatcgtttaaaaattggttcctgt 20651066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 176 - 234
Target Start/End: Complemental strand, 12081066 - 12081008
Alignment:
Q  176 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 234  Q
    ||||||||||||||||||||||| ||| ||| ||| |||||||||||||| || |||||    
T  12081066 taggcttaaatatgtatttcatccttgcaattaggagtcgtttaaaaatttgtccctgt 12081008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 176 - 234
Target Start/End: Complemental strand, 13379912 - 13379854
Alignment:
Q  176 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 234  Q
    ||||||||||||||||||| |||  || ||| ||||||||||||||||||||| |||||    
T  13379912 taggcttaaatatgtatttgatccctgcaattaggggtcgtttaaaaattggtccctgt 13379854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 176 - 234
Target Start/End: Original strand, 26463177 - 26463235
Alignment:
Q  176 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 234  Q
    ||||||||||||||||||| |||  || ||| ||||||||||||||||||||| |||||    
T  26463177 taggcttaaatatgtatttgatccctgcaattaggggtcgtttaaaaattggtccctgt 26463235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 177 - 226
Target Start/End: Original strand, 21627712 - 21627761
Alignment:
Q  177 aggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattg 226  Q
    |||||||||||||||||||||| ||||||| | || ||||||||||||||    
T  21627712 aggcttaaatatgtatttcatccttgtaattaaggatcgtttaaaaattg 21627761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 228
Target Start/End: Original strand, 11434804 - 11434852
Alignment:
Q  180 cttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 228  Q
    ||||||||||||||||||| ||| ||| | |||||||||||||||||||    
T  11434804 cttaaatatgtatttcatccttgcaattaagggtcgtttaaaaattggt 11434852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 178 - 234
Target Start/End: Complemental strand, 30337846 - 30337790
Alignment:
Q  178 ggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 234  Q
    ||||||||||||||||| ||| ||| ||| ||||||| ||||||||||||| |||||    
T  30337846 ggcttaaatatgtatttgatccttgcaattaggggtcatttaaaaattggtccctgt 30337790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 177 - 228
Target Start/End: Original strand, 679865 - 679916
Alignment:
Q  177 aggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 228  Q
    |||||||||||||||||| ||| ||| ||| | |||||||||||||||||||    
T  679865 aggcttaaatatgtatttgatccttgcaattaagggtcgtttaaaaattggt 679916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 226
Target Start/End: Original strand, 12080638 - 12080684
Alignment:
Q  180 cttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattg 226  Q
    ||||||| ||||||||||| ||| ||| |||||||||||||||||||    
T  12080638 cttaaatttgtatttcatccttgcaattaggggtcgtttaaaaattg 12080684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 178 - 228
Target Start/End: Original strand, 15115339 - 15115389
Alignment:
Q  178 ggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 228  Q
    ||||||||||||||||||||| ||| ||| || | ||||||||||||||||    
T  15115339 ggcttaaatatgtatttcatccttgcaattagagatcgtttaaaaattggt 15115389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 178 - 228
Target Start/End: Complemental strand, 15116660 - 15116610
Alignment:
Q  178 ggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 228  Q
    ||||| |||||||||||| || ||| ||| |||||||||||||||||||||    
T  15116660 ggctttaatatgtatttcgtccttgcaattaggggtcgtttaaaaattggt 15116610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 181 - 227
Target Start/End: Original strand, 22617886 - 22617932
Alignment:
Q  181 ttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattgg 227  Q
    |||||||||||||||||| ||| ||| ||| ||||||||||||||||    
T  22617886 ttaaatatgtatttcatccttgcaattaggagtcgtttaaaaattgg 22617932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 176 - 228
Target Start/End: Complemental strand, 12408601 - 12408549
Alignment:
Q  176 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 228  Q
    ||||||||||||||||||||||| ||  ||| |||||| |||||||| |||||    
T  12408601 taggcttaaatatgtatttcatccttacaattaggggttgtttaaaagttggt 12408549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 178 - 234
Target Start/End: Complemental strand, 26464627 - 26464571
Alignment:
Q  178 ggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 234  Q
    |||||||||||||||||||||  || ||| ||||||| |||||||| |||| |||||    
T  26464627 ggcttaaatatgtatttcatccctgcaattaggggtcatttaaaaaatggtccctgt 26464571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0707 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0707
Description:

Target: scaffold0707; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 177 - 234
Target Start/End: Complemental strand, 6508 - 6451
Alignment:
Q  177 aggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 234  Q
    |||||||||||||||||||||| ||| ||| ||||||||||||||||||||| |||||    
T  6508 aggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgt 6451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 177 - 228
Target Start/End: Original strand, 3555249 - 3555300
Alignment:
Q  177 aggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 228  Q
    |||||||||||||||||||||| ||| ||| |||||||||||||||||||||    
T  3555249 aggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggt 3555300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 175 - 234
Target Start/End: Complemental strand, 11163454 - 11163395
Alignment:
Q  175 ctaggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 234  Q
    |||||||||||||||||||| ||| ||| ||| ||||||||||||||||||||| |||||    
T  11163454 ctaggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgt 11163395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 177 - 228
Target Start/End: Original strand, 34447812 - 34447863
Alignment:
Q  177 aggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 228  Q
    |||||||||||||||||||||| ||||||| ||||||| |||||||||||||    
T  34447812 aggcttaaatatgtatttcatccttgtaattaggggtcatttaaaaattggt 34447863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 177 - 228
Target Start/End: Complemental strand, 36755517 - 36755466
Alignment:
Q  177 aggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 228  Q
    |||||||||||||||||||||| ||| ||| |||||||||||||||||||||    
T  36755517 aggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggt 36755466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 177 - 228
Target Start/End: Complemental strand, 45556476 - 45556425
Alignment:
Q  177 aggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 228  Q
    |||||||||||||||||| ||| ||||||| |||||||||||||||||||||    
T  45556476 aggcttaaatatgtatttgatccttgtaattaggggtcgtttaaaaattggt 45556425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 176 - 226
Target Start/End: Complemental strand, 39423945 - 39423895
Alignment:
Q  176 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattg 226  Q
    ||||||||||||||||||||||| ||| ||| |||||||||||||||||||    
T  39423945 taggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattg 39423895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 177 - 230
Target Start/End: Complemental strand, 2318939 - 2318886
Alignment:
Q  177 aggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttc 230  Q
    |||||||||||||||||||||| ||  ||| |||||||||||||||||||||||    
T  2318939 aggcttaaatatgtatttcatccttccaattaggggtcgtttaaaaattggttc 2318886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 177 - 234
Target Start/End: Original strand, 15848087 - 15848144
Alignment:
Q  177 aggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 234  Q
    ||||||| |||||||||||||| ||| ||| ||||||||||||||||||||| |||||    
T  15848087 aggcttatatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgt 15848144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 176 - 229
Target Start/End: Complemental strand, 15848518 - 15848465
Alignment:
Q  176 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggtt 229  Q
    |||||||||||| |||||||||| ||| ||| ||||||||||||||||||||||    
T  15848518 taggcttaaataagtatttcatccttgcaattaggggtcgtttaaaaattggtt 15848465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 177 - 234
Target Start/End: Complemental strand, 16099453 - 16099396
Alignment:
Q  177 aggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 234  Q
    |||||||||||||||||| ||| ||| ||| ||||||||||||||||||||| |||||    
T  16099453 aggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgt 16099396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 177 - 234
Target Start/End: Complemental strand, 36382556 - 36382499
Alignment:
Q  177 aggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 234  Q
    |||||||||||||||||||||| ||| ||| | ||||||||||||||||||| |||||    
T  36382556 aggcttaaatatgtatttcatccttgcaattaagggtcgtttaaaaattggtccctgt 36382499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 177 - 234
Target Start/End: Original strand, 37895346 - 37895403
Alignment:
Q  177 aggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 234  Q
    |||||||||||||||||||||| ||| ||| | ||||||||||||||||||| |||||    
T  37895346 aggcttaaatatgtatttcatccttgcaattaagggtcgtttaaaaattggtccctgt 37895403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 174 - 234
Target Start/End: Original strand, 6657874 - 6657934
Alignment:
Q  174 tctaggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 234  Q
    ||||||||||||||||||||| ||| ||| |||  |||||||||||||||||||| |||||    
T  6657874 tctaggcttaaatatgtatttgatccttgcaatttggggtcgtttaaaaattggtccctgt 6657934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 178 - 234
Target Start/End: Complemental strand, 10713151 - 10713095
Alignment:
Q  178 ggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 234  Q
    ||||||||||||||||||||| ||| ||| | |||||||||||||||||||| ||||    
T  10713151 ggcttaaatatgtatttcatccttgcaattaagggtcgtttaaaaattggtttctgt 10713095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 181 - 228
Target Start/End: Original strand, 6588686 - 6588733
Alignment:
Q  181 ttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 228  Q
    |||||||||||||||||| ||| ||| |||||||||||||||||||||    
T  6588686 ttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggt 6588733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 179 - 230
Target Start/End: Original strand, 36755094 - 36755145
Alignment:
Q  179 gcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttc 230  Q
    |||||||||||||||||||| || |||| || ||||||||||||||||||||    
T  36755094 gcttaaatatgtatttcatctttataattagaggtcgtttaaaaattggttc 36755145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 170 - 228
Target Start/End: Complemental strand, 25231284 - 25231226
Alignment:
Q  170 tctttctaggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 228  Q
    ||||| ||||||||||||||||||| |||  || ||| |||||||||||||||||||||    
T  25231284 tctttataggcttaaatatgtatttaatccctgcaattaggggtcgtttaaaaattggt 25231226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 178 - 228
Target Start/End: Original strand, 39423515 - 39423565
Alignment:
Q  178 ggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 228  Q
    |||||||||| |||||||||| ||||||| | |||||||||||||||||||    
T  39423515 ggcttaaatacgtatttcatccttgtaattacgggtcgtttaaaaattggt 39423565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 176 - 234
Target Start/End: Complemental strand, 44045432 - 44045374
Alignment:
Q  176 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 234  Q
    ||||||||||||||||||| |||  || ||| ||||||||||||||||||||| |||||    
T  44045432 taggcttaaatatgtatttgatccctgcaattaggggtcgtttaaaaattggtccctgt 44045374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 182 - 228
Target Start/End: Original strand, 44713799 - 44713845
Alignment:
Q  182 taaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 228  Q
    ||||||||||||||||| ||||||| | |||||||||||||||||||    
T  44713799 taaatatgtatttcatccttgtaattaagggtcgtttaaaaattggt 44713845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 175 - 228
Target Start/End: Complemental strand, 34448226 - 34448173
Alignment:
Q  175 ctaggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 228  Q
    ||||||||||| |||||||||||| ||| ||| |||||| ||||||||||||||    
T  34448226 ctaggcttaaacatgtatttcatccttgcaattaggggttgtttaaaaattggt 34448173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 185 - 234
Target Start/End: Original strand, 39498317 - 39498366
Alignment:
Q  185 atatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 234  Q
    |||||||||| ||| ||||||| ||||||||||||||||||||| |||||    
T  39498317 atatgtatttgatccttgtaattaggggtcgtttaaaaattggtccctgt 39498366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 167 - 228
Target Start/End: Complemental strand, 39498718 - 39498657
Alignment:
Q  167 cattctttctaggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 228  Q
    |||| ||| ||||||||||||||||||| ||| ||| ||| |||| ||||||||||||||||    
T  39498718 cattttttttaggcttaaatatgtatttgatccttgcaattagggatcgtttaaaaattggt 39498657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 177 - 234
Target Start/End: Original strand, 45556111 - 45556168
Alignment:
Q  177 aggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 234  Q
    |||||||||||||||||| ||| ||| ||| |||| |||||||||||||||| |||||    
T  45556111 aggcttaaatatgtatttgatccttgcaattagggatcgtttaaaaattggtccctgt 45556168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 178 - 234
Target Start/End: Complemental strand, 6658275 - 6658219
Alignment:
Q  178 ggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 234  Q
    ||||||||||||||||| ||| ||| ||| || |||||||||||||||||| |||||    
T  6658275 ggcttaaatatgtatttgatccttgcaattagaggtcgtttaaaaattggtccctgt 6658219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 178 - 226
Target Start/End: Complemental strand, 21370630 - 21370582
Alignment:
Q  178 ggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattg 226  Q
    ||||||||||||||||||||| ||||||| |  ||||||||||||||||    
T  21370630 ggcttaaatatgtatttcatccttgtaattataggtcgtttaaaaattg 21370582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 178 - 234
Target Start/End: Original strand, 25230102 - 25230158
Alignment:
Q  178 ggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 234  Q
    ||||||||||||||||| |||  || ||| ||||||||||||||||||||| |||||    
T  25230102 ggcttaaatatgtatttaatccctgcaattaggggtcgtttaaaaattggtccctgt 25230158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 176 - 228
Target Start/End: Original strand, 36382159 - 36382211
Alignment:
Q  176 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 228  Q
    ||||||||| ||||||||||||| ||| ||| |||| ||||||||||||||||    
T  36382159 taggcttaagtatgtatttcatccttgcaattagggttcgtttaaaaattggt 36382211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 228
Target Start/End: Complemental strand, 36480144 - 36480096
Alignment:
Q  180 cttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 228  Q
    ||||||||||||||||||| ||| ||| | |||||||||||||||||||    
T  36480144 cttaaatatgtatttcatccttgcaattaagggtcgtttaaaaattggt 36480096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 178 - 228
Target Start/End: Complemental strand, 6307145 - 6307096
Alignment:
Q  178 ggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 228  Q
    ||||||||||||||||||||| ||| ||| || ||||||||||||||||||    
T  6307145 ggcttaaatatgtatttcatc-ttgcaattagtggtcgtttaaaaattggt 6307096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 178 - 228
Target Start/End: Complemental strand, 9076495 - 9076445
Alignment:
Q  178 ggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 228  Q
    ||||||||||||||||| ||  ||| ||| |||||||||||||||||||||    
T  9076495 ggcttaaatatgtattttattcttgcaattaggggtcgtttaaaaattggt 9076445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 178 - 228
Target Start/End: Original strand, 30729621 - 30729671
Alignment:
Q  178 ggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 228  Q
    ||||||||||||||||||||| ||| ||| ||  |||||||||||||||||    
T  30729621 ggcttaaatatgtatttcatccttgcaattagacgtcgtttaaaaattggt 30729671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 181 - 231
Target Start/End: Complemental strand, 37895772 - 37895722
Alignment:
Q  181 ttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcc 231  Q
    |||||||||||||||||| ||| ||| | |||||||||||||| |||||||    
T  37895772 ttaaatatgtatttcatccttgcaattatgggtcgtttaaaaaatggttcc 37895722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 176 - 234
Target Start/End: Complemental strand, 44714190 - 44714133
Alignment:
Q  176 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 234  Q
    ||||||||||||||| ||||||| ||| ||| |||||||||||||||||| || |||||    
T  44714190 taggcttaaatatgt-tttcatccttgcaattaggggtcgtttaaaaattagtccctgt 44714133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 234
Target Start/End: Complemental strand, 13692637 - 13692592
Alignment:
Q  189 gtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 234  Q
    |||||||||| ||| ||| ||||||||||||||||||||| |||||    
T  13692637 gtatttcatccttgcaattaggggtcgtttaaaaattggtccctgt 13692592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 228
Target Start/End: Original strand, 36479719 - 36479768
Alignment:
Q  180 cttaaatatgtatttcatcatt-gtaatcaggggtcgtttaaaaattggt 228  Q
    ||||||||||||||||||| || | ||| |||||||||||||||||||||    
T  36479719 cttaaatatgtatttcatcctttgcaattaggggtcgtttaaaaattggt 36479768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 234
Target Start/End: Original strand, 44044113 - 44044170
Alignment:
Q  177 aggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 234  Q
    |||||||||||||||||| |||  || ||| |||||| |||||||||||||| |||||    
T  44044113 aggcttaaatatgtatttgatccctgcaattaggggtggtttaaaaattggtccctgt 44044170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 228
Target Start/End: Original strand, 10712725 - 10712773
Alignment:
Q  180 cttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 228  Q
    ||||| ||||||||||||| ||| ||| |||| ||||||||||||||||    
T  10712725 cttaagtatgtatttcatccttgcaattagggttcgtttaaaaattggt 10712773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 178 - 234
Target Start/End: Original strand, 11163054 - 11163110
Alignment:
Q  178 ggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 234  Q
    ||||||||||||||||| ||| ||| ||| |  |||||||||||||||||| |||||    
T  11163054 ggcttaaatatgtatttgatctttgcaattaaaggtcgtttaaaaattggtccctgt 11163110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 178 - 234
Target Start/End: Original strand, 16099055 - 16099111
Alignment:
Q  178 ggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 234  Q
    ||||||||||||||||| ||  ||| ||| ||||||| ||||||||||||| |||||    
T  16099055 ggcttaaatatgtatttgattcttgcaattaggggtcatttaaaaattggtccctgt 16099111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 176 - 225
Target Start/End: Original strand, 14427 - 14476
Alignment:
Q  176 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaatt 225  Q
    ||||||||||||||||||||||||||| ||| ||| ||||||||||||||    
T  14427 taggcttaaatatgtatttcatcattgcaattaggagtcgtttaaaaatt 14476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 178 - 228
Target Start/End: Complemental strand, 14818 - 14768
Alignment:
Q  178 ggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 228  Q
    |||||||||||| |||||||| ||| ||| |||||||||||||||||||||    
T  14818 ggcttaaatatgaatttcatccttgcaattaggggtcgtttaaaaattggt 14768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 37; Significance: 0.000000000007; HSPs: 2)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 178 - 234
Target Start/End: Original strand, 68965 - 69021
Alignment:
Q  178 ggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 234  Q
    ||||||||||||||||||||| ||| ||| ||||||| ||||||||||||| |||||    
T  68965 ggcttaaatatgtatttcatccttgcaattaggggtcatttaaaaattggtccctgt 69021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 178 - 234
Target Start/End: Complemental strand, 69393 - 69337
Alignment:
Q  178 ggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 234  Q
    ||||||||||||||||||||| ||| ||| ||  ||||||||||||||||| |||||    
T  69393 ggcttaaatatgtatttcatccttgcaattagatgtcgtttaaaaattggtccctgt 69337  T

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Target: scaffold0007 (Bit Score: 37; Significance: 0.000000000007; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 177 - 233
Target Start/End: Complemental strand, 2170 - 2114
Alignment:
Q  177 aggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctg 233  Q
    |||||||||||||||||| ||| ||| ||| ||||||||||||||||||||| ||||    
T  2170 aggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctg 2114  T

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Target: scaffold0007; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 176 - 234
Target Start/End: Original strand, 1767 - 1825
Alignment:
Q  176 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 234  Q
    ||||||||||||||||||| ||| ||| ||| |||||||||| |||||||||| |||||    
T  1767 taggcttaaatatgtatttgatccttgcaattaggggtcgttaaaaaattggtccctgt 1825  T

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Target: scaffold0005 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 177 - 228
Target Start/End: Complemental strand, 37992 - 37941
Alignment:
Q  177 aggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggt 228  Q
    |||||||||||||||||||||| ||| ||| ||| |||||||||||||||||    
T  37992 aggcttaaatatgtatttcatccttgcaattaggagtcgtttaaaaattggt 37941  T

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Target: scaffold0020 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 176 - 234
Target Start/End: Original strand, 139670 - 139728
Alignment:
Q  176 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 234  Q
    |||| |||||||||||||| ||| ||| ||| ||||||||||||||||||||| |||||    
T  139670 taggattaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgt 139728  T

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Target: scaffold0020; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 234
Target Start/End: Complemental strand, 140066 - 140013
Alignment:
Q  181 ttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 234  Q
    |||||||||||||| ||| ||| ||| |||||| |||||||||||||| |||||    
T  140066 ttaaatatgtatttgatccttgcaattaggggttgtttaaaaattggtccctgt 140013  T

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Target: scaffold0775 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0775
Description:

Target: scaffold0775; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 176 - 226
Target Start/End: Original strand, 4960 - 5010
Alignment:
Q  176 taggcttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattg 226  Q
    |||||||||||||||||||||||  |  ||| |||||||||||||||||||    
T  4960 taggcttaaatatgtatttcatccctacaattaggggtcgtttaaaaattg 5010  T

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Target: scaffold0128 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 234
Target Start/End: Original strand, 19860 - 19913
Alignment:
Q  181 ttaaatatgtatttcatcattgtaatcaggggtcgtttaaaaattggttcctgt 234  Q
    ||||||||||||||| || ||| ||| | ||||||||||||||||||| |||||    
T  19860 ttaaatatgtatttcgtccttgcaattatgggtcgtttaaaaattggtccctgt 19913  T

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