View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3151_1D_low_39 (Length: 235)
Name: NF3151_1D_low_39
Description: NF3151_1D
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3151_1D_low_39 |
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Alignment Details
Target: chr1 (Bit Score: 166; Significance: 6e-89; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 166; E-Value: 6e-89
Query Start/End: Original strand, 21 - 210
Target Start/End: Complemental strand, 39850847 - 39850658
Alignment:
| Q |
21 |
aagagtgactcttaatattcctcatgattatcttctgagccattgtaaatattgtctttttcacaaaaagtggcaaacattgctagtcatgattatcttt |
120 |
Q |
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| T |
39850847 |
aagagtgacttttaatattcgtcatgattatcttctgagccatcgtaaatattatctttttcacgaaaagtggcaaacattgctagtcatgattatcttt |
39850748 |
T |
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| Q |
121 |
tagtctattccattttgtaaattacaattattcttgttctagatataaaatataagatcaaagggtagagttgaaactttaaaattgtgt |
210 |
Q |
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| T |
39850747 |
tagtctattccattttgtaaattacaattattcttgttctagatataaaatataagatcaaagggtagagttaaaactttaaaattgtgt |
39850658 |
T |
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