View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3151_1D_low_55 (Length: 209)
Name: NF3151_1D_low_55
Description: NF3151_1D
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3151_1D_low_55 |
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Alignment Details
Target: chr4 (Bit Score: 145; Significance: 2e-76; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 34 - 206
Target Start/End: Original strand, 41263566 - 41263738
Alignment:
| Q |
34 |
caaaatgtaacgtataatataataaaaatgatcaattatattttttcttttcttacatgagaaagaggaaaaaacataaaagagatccataaaatatcaa |
133 |
Q |
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| T |
41263566 |
caaaatgtaacgtataatataataaaaatgatcaattatattttttcttttcttacatgagaaagaggaaaaaacataaaagagatccataaaacatcaa |
41263665 |
T |
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| Q |
134 |
ccataaacttaggaaagctcacgacaacgtacatgtaatcgaataatagattttaaacctctaactccaaact |
206 |
Q |
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| T |
41263666 |
ctataaatttaggaaagcttacgataacgtacatgtaatcgaataatagattttaaatctctaactcctaact |
41263738 |
T |
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