View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3151_2D_high_28 (Length: 271)
Name: NF3151_2D_high_28
Description: NF3151_2D
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3151_2D_high_28 |
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| [»] chr3 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 225; Significance: 1e-124; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 19 - 271
Target Start/End: Original strand, 45552745 - 45552997
Alignment:
| Q |
19 |
agattggttgttcggaaaacttatacaatagtttatagtttatggtataggaaagtttggattggtttgtttaagtttcaacaacagccttacaacaaat |
118 |
Q |
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| T |
45552745 |
agattggttgttcggaaaacttatacaatagtttatagtttatggtataggaaagtttggattggtttgtttacgtttcaacaacagccttacaacaaat |
45552844 |
T |
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| Q |
119 |
gatgttttcggtatttttaagctgcaagatccgaacaacttttctccccaacgagggtatataacaggtaccaaatcttaaaagtttaagactccttcat |
218 |
Q |
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| T |
45552845 |
gatgtttttggtatttttaagctgcaagatcccaacaacttttctccccaatgagggtatataacaggtaccaaatcttaaaagattaagactccttcat |
45552944 |
T |
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| Q |
219 |
tgaggatggtcttatcctacattaaattagttttttggattataagtcatcat |
271 |
Q |
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| T |
45552945 |
tgaagatggtcttatcctccattaaattagttttttggattataagtcatcat |
45552997 |
T |
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