View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3151_2D_low_1 (Length: 1320)

Name: NF3151_2D_low_1
Description: NF3151_2D
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3151_2D_low_1
NF3151_2D_low_1
[»] chr7 (51 HSPs)
chr7 (215-1299)||(12485854-12486933)
chr7 (215-1299)||(12507286-12508365)
chr7 (438-1299)||(12540236-12541093)
chr7 (215-460)||(12658172-12658417)
chr7 (14-214)||(18776683-18776883)
chr7 (216-412)||(12504963-12505159)
chr7 (14-214)||(29077205-29077404)
chr7 (14-211)||(8171460-8171656)
chr7 (216-412)||(12483533-12483729)
chr7 (14-214)||(12596207-12596404)
chr7 (14-215)||(20091196-20091398)
chr7 (14-215)||(10329326-10329527)
chr7 (14-214)||(23550988-23551188)
chr7 (14-214)||(10955469-10955671)
chr7 (51-214)||(26254015-26254178)
chr7 (14-214)||(19692079-19692279)
chr7 (14-214)||(38414793-38414993)
chr7 (14-214)||(24525599-24525802)
chr7 (14-214)||(48983756-48983961)
chr7 (18-214)||(47984885-47985083)
chr7 (34-214)||(28749715-28749895)
chr7 (14-215)||(25010418-25010612)
chr7 (14-212)||(8239670-8239869)
chr7 (33-132)||(9021799-9021898)
chr7 (52-132)||(33162338-33162418)
chr7 (30-133)||(2611260-2611363)
chr7 (33-125)||(23859077-23859169)
chr7 (30-133)||(7398452-7398555)
chr7 (1084-1212)||(12659034-12659162)
chr7 (41-132)||(6765680-6765771)
chr7 (30-125)||(36891579-36891674)
chr7 (41-133)||(23744808-23744900)
chr7 (30-125)||(12981327-12981422)
chr7 (30-133)||(27237421-27237524)
chr7 (146-208)||(40357303-40357365)
chr7 (833-957)||(12658793-12658917)
chr7 (34-125)||(20153206-20153297)
chr7 (33-131)||(36902924-36903022)
chr7 (292-351)||(12646526-12646585)
chr7 (840-957)||(12646986-12647103)
chr7 (1124-1299)||(11378395-11378570)
chr7 (30-133)||(12419493-12419596)
chr7 (46-132)||(21763586-21763672)
chr7 (30-126)||(18201138-18201234)
chr7 (1141-1208)||(12623246-12623313)
chr7 (1139-1278)||(12652648-12652787)
chr7 (30-118)||(9014782-9014863)
chr7 (1047-1292)||(12647189-12647428)
chr7 (31-109)||(38971255-38971333)
chr7 (76-132)||(9014177-9014233)
chr7 (264-324)||(12540059-12540119)
[»] chr6 (23 HSPs)
chr6 (14-214)||(13727317-13727517)
chr6 (14-214)||(21280533-21280733)
chr6 (14-214)||(21479482-21479683)
chr6 (14-214)||(27788608-27788806)
chr6 (14-213)||(33774105-33774305)
chr6 (19-214)||(20711638-20711833)
chr6 (14-215)||(17353942-17354143)
chr6 (14-214)||(30832443-30832642)
chr6 (14-133)||(19737691-19737810)
chr6 (14-215)||(24710913-24711117)
chr6 (14-200)||(28075771-28075960)
chr6 (34-212)||(1155767-1155947)
chr6 (52-214)||(27314097-27314259)
chr6 (14-133)||(34397845-34397964)
chr6 (1163-1299)||(14987374-14987510)
chr6 (14-200)||(235157-235343)
chr6 (30-126)||(2477590-2477686)
chr6 (30-126)||(6159442-6159538)
chr6 (30-121)||(21183686-21183777)
chr6 (30-125)||(20611794-20611889)
chr6 (31-109)||(4036953-4037031)
chr6 (47-132)||(30121783-30121868)
chr6 (155-200)||(19987277-19987322)
[»] chr2 (35 HSPs)
chr2 (14-214)||(4505878-4506078)
chr2 (14-215)||(3155201-3155402)
chr2 (14-211)||(6964991-6965186)
chr2 (14-215)||(12337364-12337566)
chr2 (14-214)||(8906996-8907197)
chr2 (14-214)||(29939781-29939980)
chr2 (18-215)||(26716116-26716314)
chr2 (14-214)||(3952990-3953188)
chr2 (14-214)||(7162768-7162967)
chr2 (14-214)||(27506659-27506858)
chr2 (14-211)||(10762488-10762683)
chr2 (14-214)||(24410420-24410623)
chr2 (18-214)||(9046017-9046213)
chr2 (56-210)||(40636164-40636317)
chr2 (46-211)||(34693991-34694155)
chr2 (46-211)||(34716403-34716567)
chr2 (56-208)||(5952642-5952791)
chr2 (30-133)||(16097008-16097111)
chr2 (101-214)||(1396617-1396730)
chr2 (32-133)||(24035544-24035645)
chr2 (30-131)||(38400798-38400899)
chr2 (30-133)||(13800543-13800647)
chr2 (30-133)||(12134039-12134142)
chr2 (30-133)||(21665699-21665802)
chr2 (30-133)||(28425709-28425812)
chr2 (30-133)||(7742132-7742236)
chr2 (86-198)||(8327674-8327785)
chr2 (30-132)||(16227368-16227470)
chr2 (30-198)||(11912691-11912859)
chr2 (30-99)||(37182670-37182739)
chr2 (36-104)||(22727530-22727598)
chr2 (53-132)||(42029168-42029247)
chr2 (92-133)||(22727456-22727497)
chr2 (76-132)||(11952588-11952643)
chr2 (86-125)||(10252472-10252511)
[»] chr3 (37 HSPs)
chr3 (14-214)||(54619121-54619321)
chr3 (14-214)||(38681011-38681211)
chr3 (14-214)||(27078486-27078687)
chr3 (14-214)||(27084283-27084484)
chr3 (14-214)||(47467672-47467872)
chr3 (14-215)||(36715941-36716143)
chr3 (14-214)||(21582759-21582960)
chr3 (14-219)||(8073252-8073455)
chr3 (14-215)||(34290553-34290754)
chr3 (14-214)||(42098789-42098989)
chr3 (14-213)||(3953816-3954014)
chr3 (18-210)||(37168359-37168551)
chr3 (14-215)||(43207156-43207355)
chr3 (14-210)||(44708465-44708660)
chr3 (14-211)||(53149235-53149432)
chr3 (14-214)||(53506802-53507002)
chr3 (14-202)||(18372467-18372658)
chr3 (14-214)||(50939152-50939351)
chr3 (34-211)||(36605973-36606149)
chr3 (25-214)||(50258542-50258731)
chr3 (14-214)||(54407073-54407275)
chr3 (14-176)||(9878644-9878805)
chr3 (16-97)||(29620423-29620504)
chr3 (30-133)||(54574826-54574929)
chr3 (35-125)||(28689368-28689458)
chr3 (30-125)||(8420330-8420425)
chr3 (14-200)||(48157127-48157302)
chr3 (30-125)||(32319162-32319257)
chr3 (152-214)||(29620364-29620426)
chr3 (35-132)||(49393099-49393195)
chr3 (30-132)||(25855426-25855527)
chr3 (47-133)||(26279563-26279649)
chr3 (146-215)||(48720428-48720497)
chr3 (70-121)||(23641329-23641380)
chr3 (30-132)||(789940-790042)
chr3 (73-133)||(42453451-42453511)
chr3 (30-133)||(52374660-52374763)
[»] chr5 (46 HSPs)
chr5 (14-202)||(34756293-34756481)
chr5 (14-214)||(36187795-36187994)
chr5 (14-214)||(27078996-27079197)
chr5 (14-214)||(15480006-15480204)
chr5 (14-214)||(38869279-38869478)
chr5 (14-211)||(30854314-30854511)
chr5 (14-214)||(16591990-16592189)
chr5 (14-210)||(19523184-19523380)
chr5 (14-209)||(2274875-2275070)
chr5 (14-214)||(16198709-16198909)
chr5 (14-200)||(9364276-9364462)
chr5 (14-213)||(28822253-28822457)
chr5 (34-214)||(31194528-31194706)
chr5 (14-214)||(16799240-16799442)
chr5 (29-214)||(22986473-22986658)
chr5 (14-200)||(27924067-27924253)
chr5 (14-215)||(7670909-7671119)
chr5 (18-128)||(40389537-40389647)
chr5 (27-133)||(23284058-23284164)
chr5 (34-214)||(31881348-31881528)
chr5 (51-200)||(7338021-7338170)
chr5 (32-133)||(36868872-36868973)
chr5 (30-132)||(14318382-14318484)
chr5 (33-133)||(2024638-2024738)
chr5 (30-125)||(2530901-2530996)
chr5 (30-133)||(34425904-34426007)
chr5 (33-125)||(26718953-26719045)
chr5 (33-125)||(26988697-26988789)
chr5 (30-133)||(1366522-1366625)
chr5 (30-133)||(33037781-33037884)
chr5 (30-132)||(2412089-2412191)
chr5 (31-125)||(24395741-24395835)
chr5 (32-133)||(10407464-10407565)
chr5 (1125-1212)||(3939701-3939788)
chr5 (38-125)||(10543682-10543769)
chr5 (30-133)||(11242314-11242417)
chr5 (30-133)||(40794323-40794426)
chr5 (41-131)||(22648734-22648824)
chr5 (30-132)||(41911614-41911716)
chr5 (86-133)||(606211-606258)
chr5 (149-200)||(40389467-40389518)
chr5 (30-110)||(15639644-15639724)
chr5 (146-214)||(23283943-23284011)
chr5 (292-364)||(3938851-3938923)
chr5 (42-126)||(17344969-17345053)
chr5 (89-133)||(27530543-27530587)
[»] chr8 (34 HSPs)
chr8 (14-214)||(2952137-2952339)
chr8 (14-211)||(30883314-30883512)
chr8 (14-214)||(3048435-3048635)
chr8 (14-214)||(45475802-45476001)
chr8 (14-211)||(13534609-13534804)
chr8 (14-211)||(13624149-13624344)
chr8 (14-214)||(23606548-23606747)
chr8 (14-214)||(23798179-23798379)
chr8 (14-214)||(42600767-42600967)
chr8 (14-202)||(5860672-5860862)
chr8 (14-214)||(37430076-37430276)
chr8 (14-214)||(41879166-41879364)
chr8 (14-215)||(10917376-10917576)
chr8 (30-133)||(7944521-7944624)
chr8 (30-125)||(8102913-8103008)
chr8 (30-133)||(5973106-5973209)
chr8 (30-133)||(11290185-11290288)
chr8 (30-132)||(39332405-39332507)
chr8 (30-110)||(5942697-5942777)
chr8 (30-133)||(15167414-15167517)
chr8 (30-124)||(5721560-5721654)
chr8 (30-133)||(41677172-41677276)
chr8 (30-125)||(15078759-15078854)
chr8 (30-125)||(25561502-25561595)
chr8 (35-133)||(34789861-34789959)
chr8 (38-133)||(8646215-8646309)
chr8 (146-214)||(20003728-20003796)
chr8 (53-132)||(30674403-30674482)
chr8 (30-132)||(14509983-14510084)
chr8 (87-132)||(9108551-9108596)
chr8 (53-126)||(23941097-23941170)
chr8 (86-125)||(34868184-34868223)
chr8 (33-132)||(34048705-34048806)
chr8 (72-102)||(5757123-5757153)
[»] chr1 (44 HSPs)
chr1 (14-214)||(44655737-44655936)
chr1 (14-214)||(14146296-14146495)
chr1 (14-215)||(5316676-5316876)
chr1 (14-214)||(23185423-23185622)
chr1 (14-215)||(5027545-5027747)
chr1 (14-214)||(17168952-17169151)
chr1 (14-214)||(6771787-6771989)
chr1 (14-211)||(50881426-50881621)
chr1 (14-215)||(3406414-3406615)
chr1 (14-215)||(3440205-3440406)
chr1 (14-214)||(4971536-4971735)
chr1 (14-214)||(27906646-27906834)
chr1 (18-208)||(16140055-16140244)
chr1 (14-215)||(19955713-19955913)
chr1 (14-214)||(9172940-9173140)
chr1 (14-214)||(9180922-9181122)
chr1 (14-214)||(40501707-40501907)
chr1 (14-197)||(41697072-41697254)
chr1 (14-199)||(1366812-1366995)
chr1 (16-133)||(27559635-27559752)
chr1 (39-215)||(21740851-21741029)
chr1 (14-198)||(51607374-51607557)
chr1 (41-214)||(6889634-6889805)
chr1 (41-214)||(6891480-6891651)
chr1 (53-214)||(22865378-22865538)
chr1 (14-211)||(13913401-13913599)
chr1 (30-132)||(38547035-38547137)
chr1 (14-198)||(44895648-44895827)
chr1 (35-133)||(38853539-38853637)
chr1 (30-133)||(39134720-39134824)
chr1 (30-133)||(45758506-45758609)
chr1 (1139-1299)||(15329348-15329508)
chr1 (32-133)||(5533326-5533428)
chr1 (146-208)||(34247154-34247216)
chr1 (43-125)||(35392295-35392376)
chr1 (30-132)||(26803960-26804059)
chr1 (30-133)||(50146308-50146411)
chr1 (30-125)||(43235774-43235871)
chr1 (30-126)||(33170771-33170867)
chr1 (70-133)||(17322621-17322684)
chr1 (30-132)||(6221690-6221791)
chr1 (33-133)||(10925951-10926052)
chr1 (306-367)||(52035084-52035145)
chr1 (180-217)||(52127457-52127494)
[»] chr4 (56 HSPs)
chr4 (14-202)||(38209520-38209708)
chr4 (14-210)||(47128977-47129172)
chr4 (18-217)||(54780771-54780971)
chr4 (14-214)||(34768492-34768691)
chr4 (14-215)||(32915375-32915576)
chr4 (17-200)||(43455463-43455645)
chr4 (14-214)||(32128574-32128774)
chr4 (14-214)||(34027569-34027768)
chr4 (14-198)||(37777156-37777340)
chr4 (14-214)||(10978890-10979092)
chr4 (14-210)||(1105522-1105717)
chr4 (21-214)||(2790659-2790851)
chr4 (14-217)||(10428113-10428322)
chr4 (14-214)||(55255259-55255447)
chr4 (14-214)||(48209230-48209436)
chr4 (14-214)||(5128758-5128959)
chr4 (14-214)||(54083160-54083359)
chr4 (14-215)||(16845011-16845211)
chr4 (14-214)||(19498494-19498691)
chr4 (14-217)||(40089506-40089717)
chr4 (14-215)||(37514649-37514849)
chr4 (14-123)||(13460197-13460306)
chr4 (14-214)||(16882313-16882512)
chr4 (14-202)||(35465097-35465283)
chr4 (14-211)||(35779248-35779442)
chr4 (56-214)||(17679432-17679589)
chr4 (14-200)||(38352197-38352372)
chr4 (52-211)||(51964736-51964897)
chr4 (30-199)||(52468292-52468459)
chr4 (51-214)||(16922245-16922409)
chr4 (14-133)||(24969427-24969536)
chr4 (30-112)||(4167910-4167992)
chr4 (70-133)||(51691913-51691976)
chr4 (78-214)||(23508427-23508564)
chr4 (14-83)||(23509846-23509915)
chr4 (30-126)||(27112036-27112132)
chr4 (30-126)||(36118463-36118559)
chr4 (60-133)||(9578662-9578736)
chr4 (36-126)||(36178684-36178774)
chr4 (53-133)||(39655252-39655332)
chr4 (30-133)||(10041998-10042101)
chr4 (30-133)||(24396940-24397043)
chr4 (30-126)||(2135326-2135422)
chr4 (31-199)||(39329325-39329492)
chr4 (30-124)||(37744916-37745011)
chr4 (38-133)||(36362869-36362964)
chr4 (30-126)||(45656181-45656277)
chr4 (30-119)||(40217238-40217327)
chr4 (146-214)||(24969718-24969786)
chr4 (143-198)||(2975358-2975413)
chr4 (159-214)||(13460305-13460360)
chr4 (89-132)||(24614018-24614061)
chr4 (91-133)||(30507120-30507162)
chr4 (74-118)||(29425187-29425231)
chr4 (76-123)||(15735142-15735189)
chr4 (165-214)||(9578575-9578624)
[»] scaffold0070 (1 HSPs)
scaffold0070 (14-214)||(1328-1527)
[»] scaffold0039 (1 HSPs)
scaffold0039 (14-215)||(106523-106724)
[»] scaffold1590 (1 HSPs)
scaffold1590 (30-133)||(257-360)
[»] scaffold0012 (1 HSPs)
scaffold0012 (30-125)||(206496-206591)
[»] scaffold0018 (1 HSPs)
scaffold0018 (30-126)||(173516-173612)
[»] scaffold0097 (1 HSPs)
scaffold0097 (30-126)||(38926-39022)
[»] scaffold0007 (1 HSPs)
scaffold0007 (31-133)||(230858-230960)
[»] scaffold0182 (1 HSPs)
scaffold0182 (32-132)||(23993-24093)
[»] scaffold0001 (2 HSPs)
scaffold0001 (75-214)||(183106-183244)
scaffold0001 (14-79)||(181904-181969)
[»] scaffold1320 (1 HSPs)
scaffold1320 (30-125)||(1355-1450)
[»] scaffold0022 (2 HSPs)
scaffold0022 (30-133)||(40086-40191)
scaffold0022 (30-133)||(138146-138251)
[»] scaffold0227 (2 HSPs)
scaffold0227 (87-132)||(16123-16168)
scaffold0227 (30-97)||(16028-16095)
[»] scaffold0003 (1 HSPs)
scaffold0003 (53-106)||(351360-351413)


Alignment Details
Target: chr7 (Bit Score: 958; Significance: 0; HSPs: 51)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 958; E-Value: 0
Query Start/End: Original strand, 215 - 1299
Target Start/End: Original strand, 12485854 - 12486933
Alignment:
Q  215 tgtctactctgtcatgctcacccgtgaccccacattgcccatccgaatgttccacctcaaatgtcgtacctccctgggatgtgatccacatgatatcaat 314  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| |||||||||||||||||||||||||    
T  12485854 tgtctactctgtcatgctcacccgtgaccccacattgcccatccgaatgttccacctcaaatgtggaacctccccgggatgtgatccacatgatatcaat 12485953  T
Q  315 cgatttgttcctgttgctgtcaaaaaaggaattgagaatctcatcttagattttactaacgctggtcacgattttctaatcagattaagtcctactttgt 414  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||    
T  12485954 cgatttgttcctgttgctgtcaaaaaaggaattgagaatctcatcttagattttactagcgctggtcaccattttctaatcagattaagtcctactttgt 12486053  T
Q  415 caagtgttttcaactgcggcaggaaccttgtggttcttaagttgaaaacaataatagtgagggttcttcctcaaatcgattttcccttgcttaaaactct 514  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12486054 caagtgttttcaactgcggcaggaaacttgtggttcttaagttgaaaacaataatagtgagggttcttcctcaaatcgattttcccttgcttaaaactct 12486153  T
Q  515 ccatttggaaaa-ggttgcgattctaagagattttaataagcttattgaggggtgtcccattctagaggagttggaaataccttatttactatgtaggtt 613  Q
    |||||||||||| |||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  12486154 ccatttggaaaaaggttgcgattctaagagattttaataagctaatcgaggggtgtcccattctagaggagttggaaataccttctttactatgtaggtt 12486253  T
Q  614 ttcgaaagatggtattggagagtttaaacacttgcccaatttggtcagagctaacatttctaaatttgttccaaaaagtattcaatttgcttggatttgc 713  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12486254 ttcgaaagatggtattggagagtttaaacacttgcccaatttggttagagctaacatttctaaatttgttccaaaaagtattcaatttgcttggatttgc 12486353  T
Q  714 aatgcaaagtttttgcgtttagaactggtatgactatcactacatatcactagctaaagttccattaagttgaaacttatttctaatgtttgtctttgta 813  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12486354 aatgcaaagtttttgcgtttagaactggtatgactatcactacatatcactagctaaagttccattaagttgaaacttatttctaatgtttgtctttgta 12486453  T
Q  814 acccacggagcagcatagcgagcatcaagttcacgcttttcataacttaactcacatggagcttatattcacatcaaattggcgtaccaaatggaagtgg 913  Q
    ||||||  ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12486454 acccacatagcggcatagcgagcatcaagttcacgcttttcataacttaactcacatggagcttatattcacatcaaattggcgtaccaaatggaagtgg 12486553  T
Q  914 ttgctagaaatgctgaagaattgccctaaacttcaaaatcttacccttcacaaggttgtacttatgtcaatgataataatttttttgtaactcgatctac 1013  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    | |||||    
T  12486554 ttgctagaaatgctgaagaattgccctaaacttcaaaatcttacccttcacaaggttgtacttatgtcaatgataataatttttttgta----gctctac 12486649  T
Q  1014 tttcaactaatttaannnnnnnnnccttctttttatgtggattttgacagctttatggacatggtattgatgaggatgattggaaggaaccagaaattat 1113  Q
    |||||||||||||||          ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12486650 tttcaactaatttaatttttttt--cttctttctatgtggattttgacagctttatggacatggtattgatgaggatgattggaaggaaccagaaattat 12486747  T
Q  1114 tccaaactgcttttcctctcaactaagaacatgctcgcttatagattacaaaggcatgaagtgtgagcttcagtttgcagagtatgttttgaagaatgcc 1213  Q
    |||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12486748 tccaaactgcctttcctctcaactaagaacatgctcgcttatatattacaaaggcatgaagtgtgagcttcagtttgcagagtatgttttgaagaatgcc 12486847  T
Q  1214 aacttactgcgcacgatgacaattagtgcctctccaggggatttaactttaaagcaccaaatgctaatggatttatctttgtgtcc 1299  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12486848 aacttactgcgcacgatgacaattagtgcctctccaggggatttaactttaaagcaccaaatgctaatggatttatctttgtgtcc 12486933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 954; E-Value: 0
Query Start/End: Original strand, 215 - 1299
Target Start/End: Original strand, 12507286 - 12508365
Alignment:
Q  215 tgtctactctgtcatgctcacccgtgaccccacattgcccatccgaatgttccacctcaaatgtcgtacctccctgggatgtgatccacatgatatcaat 314  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||    
T  12507286 tgtctactctgtcatgctcacccgtgaccccacattgcccatccgaatgttccacctcaaatgtggtacctccccgggatgtgatccacatgatatcaat 12507385  T
Q  315 cgatttgttcctgttgctgtcaaaaaaggaattgagaatctcatcttagattttactaacgctggtcacgattttctaatcagattaagtcctactttgt 414  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||    
T  12507386 cgatttgttcctgttgctgtcaaaaaaggaattgagaatctcatcttagattttactagcgctggtcactattttctaatcagattaagtcctactttgt 12507485  T
Q  415 caagtgttttcaactgcggcaggaaccttgtggttcttaagttgaaaacaataatagtgagggttcttcctcaaatcgattttcccttgcttaaaactct 514  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12507486 caagtgttttcaactgcggcaggaaacttgtggttcttaagttgaaaacaataatagtgagggttcttcctcaaatcgattttcccttgcttaaaactct 12507585  T
Q  515 ccatttggaaaa-ggttgcgattctaagagattttaataagcttattgaggggtgtcccattctagaggagttggaaataccttatttactatgtaggtt 613  Q
    |||||||||||| |||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  12507586 ccatttggaaaaaggttgcgattctaagagattttaataagctaatcgaggggtgtcccattctagaggagttggaaataccttctttactatgtaggtt 12507685  T
Q  614 ttcgaaagatggtattggagagtttaaacacttgcccaatttggtcagagctaacatttctaaatttgttccaaaaagtattcaatttgcttggatttgc 713  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12507686 ttcgaaagatggtattggagagtttaaacacttgcccaatttggttagagctaacatttctaaatttgttccaaaaagtattcaatttgcttggatttgc 12507785  T
Q  714 aatgcaaagtttttgcgtttagaactggtatgactatcactacatatcactagctaaagttccattaagttgaaacttatttctaatgtttgtctttgta 813  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12507786 aatgcaaagtttttgcgtttagaactggtatgactatcactacatatcactagctaaagttccattaagttgaaacttatttctaatgtttgtctttgta 12507885  T
Q  814 acccacggagcagcatagcgagcatcaagttcacgcttttcataacttaactcacatggagcttatattcacatcaaattggcgtaccaaatggaagtgg 913  Q
    ||||||  ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  12507886 acccacatagcggcatagcgagcatcaagttcacgcttttcataacttaactcacatggagcttatattcacatcaaattggcgtacctaatggaagtgg 12507985  T
Q  914 ttgctagaaatgctgaagaattgccctaaacttcaaaatcttacccttcacaaggttgtacttatgtcaatgataataatttttttgtaactcgatctac 1013  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    | |||||    
T  12507986 ttgctagaaatgctgaagaattgccctaaacttcaaaatcttacccttcacaaggttgtacttatgtcaatgataataatttttttgta----gctctac 12508081  T
Q  1014 tttcaactaatttaannnnnnnnnccttctttttatgtggattttgacagctttatggacatggtattgatgaggatgattggaaggaaccagaaattat 1113  Q
    |||||||||||||||          ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12508082 tttcaactaatttaatttttttt--cttctttctatgtggattttgacagctttatggacatggtattgatgaggatgattggaaggaaccagaaattat 12508179  T
Q  1114 tccaaactgcttttcctctcaactaagaacatgctcgcttatagattacaaaggcatgaagtgtgagcttcagtttgcagagtatgttttgaagaatgcc 1213  Q
    |||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12508180 tccaaactgcctttcctctcaactaagaacatgctcgcttatatattacaaaggcatgaagtgtgagcttcagtttgcagagtatgttttgaagaatgcc 12508279  T
Q  1214 aacttactgcgcacgatgacaattagtgcctctccaggggatttaactttaaagcaccaaatgctaatggatttatctttgtgtcc 1299  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12508280 aacttactgtgcacgatgacaattagtgcctctccaggggatttaactttaaagcaccaaatgctaatggatttatctttgtgtcc 12508365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 651; E-Value: 0
Query Start/End: Original strand, 438 - 1299
Target Start/End: Original strand, 12540236 - 12541093
Alignment:
Q  438 aaccttgtggttcttaagttgaaaacaataatagtgagggttcttcctcaaatcgattttcccttgcttaaaactctccatttggaaaaggttgcgattc 537  Q
    ||||||||||||||||||||||||||| || ||||||  | ||||||||||||| |||||||||| || ||||||||||||||| ||||||||   ||||    
T  12540236 aaccttgtggttcttaagttgaaaacattattagtgaccgatcttcctcaaatcaattttcccttactcaaaactctccatttgaaaaaggtttacattc 12540335  T
Q  538 taagagattttaataagcttattgaggggtgtcccattctagaggagttggaaatacc---ttatttactatgtaggttttcgaaagatggtattggaga 634  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |   || ||| |||| |||||||||||||||||||||||||||    
T  12540336 taagagattttaataagcttatcgaggggtgtcccattctagaggagttggaaataacaacttcttttctatttaggttttcgaaagatggtattggaga 12540435  T
Q  635 gtttaaacacttgcccaatttggtcagagctaacatttctaaatttgttccaaaaagtattcaatttgcttggatttgcaatgcaaagtttttgcgttta 734  Q
    |||||||||||   ||||||||||||||| ||||||||||||||||| |||| ||| | ||| ||||||||||||||||||||||||| |||||||||||    
T  12540436 gtttaaacact---ccaatttggtcagagttaacatttctaaatttggtccacaaaattttccatttgcttggatttgcaatgcaaagattttgcgttta 12540532  T
Q  735 gaactggtatgactatcactacatatcactagctaaagttccattaagttgaaacttatttctaatgtttgtctttgtaacccacggagcagcatagcga 834  Q
    ||||||||||||||||||||||  ||| ||||||||||||  ||||||||| |||||||||| ||||||||||||||||||||||| |||| | ||||||    
T  12540533 gaactggtatgactatcactactcatcgctagctaaagttatattaagttggaacttatttcaaatgtttgtctttgtaacccacgcagcaacgtagcga 12540632  T
Q  835 gcatcaagttcacgcttttcataacttaactcacatggagcttatattcacatcaaattggcgtaccaaatggaagtggttgctagaaatgctgaagaat 934  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12540633 ggatcaagttcacgcttttcataacttaactcacatggagcttatattcacatcaaattggcgtaccaaatggaagtggttgctagaaatgctgaagaat 12540732  T
Q  935 tgccctaaacttcaaaatcttacccttcacaaggttgtacttatgtcaatgataataatttttttgtaactcgatctactttcaactaatttaannnnnn 1034  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||          
T  12540733 tgccctaaacttcaaaatcttacccttcacaaggttgtacttatgtcaatgataataatttttttgtaactcgatctactttcaactaatttaatttttt 12540832  T
Q  1035 nnnccttctttttatgtggattttgacagctttatggacatggtattgatgaggatgattggaaggaaccagaaattattccaaactgcttttcctctca 1134  Q
         |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  12540833 t----ttctttttatgtggattttgacagctttatggacatggtattgatgaggatgattggaaggaaccagaaattattccaaactgcctttcctctca 12540928  T
Q  1135 actaagaacatgctcgcttatagattacaaaggcatgaagtgtgagcttcagtttgcagagtatgttttgaagaatgccaacttactgcgcacgatgaca 1234  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12540929 actaagaacatgctcgcttatatattacaaaggcatgaagtgtgagcttcagtttgcagagtatgttttgaagaatgccaacttactgcgcacgatgaca 12541028  T
Q  1235 attagtgcctctccaggggatttaactttaaagcaccaaatgctaatggatttatctttgtgtcc 1299  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12541029 attagtgcctctccaggggatttaactttaaagcaccaaatgctaatggatttatctttgtgtcc 12541093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 202; E-Value: 1e-109
Query Start/End: Original strand, 215 - 460
Target Start/End: Original strand, 12658172 - 12658417
Alignment:
Q  215 tgtctactctgtcatgctcacccgtgaccccacattgcccatccgaatgttccacctcaaatgtcgtacctccctgggatgtgatccacatgatatcaat 314  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| |||||||||||||||||||||||||    
T  12658172 tgtctactctgtcatgctcacccgtgaccccacattgcccatccgaatgttccacctcaaatgtggaacctccccgggatgtgatccacatgatatcaat 12658271  T
Q  315 cgatttgttcctgttgctgtcaaaaaaggaattgagaatctcatcttagattttactaacgctggtcacgattttctaatcagattaagtcctactttgt 414  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||  | || ||||||||||||||||||||||| |||||||||| |    
T  12658272 cgatttgttcctgttgctgtcaaaaaaggaattgagaatctcatcttagattttactggcactagtcacgattttctaatcagattaggtcctacttttt 12658371  T
Q  415 caagtgttttcaactgcggcaggaaccttgtggttcttaagttgaa 460  Q
    ||||||||||||||||||||||||| |||||||||||||| |||||    
T  12658372 caagtgttttcaactgcggcaggaatcttgtggttcttaaattgaa 12658417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 153; E-Value: 2e-80
Query Start/End: Original strand, 14 - 214
Target Start/End: Complemental strand, 18776883 - 18776683
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    |||||||||||||||||||| |||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  18776883 tttggtgttaggtgggggtttctcatgtatacggtagtcattttcacatctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatat 18776784  T
Q  114 aaatagaacattgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccct 213  Q
    ||||||||||||||||||||        |||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||    
T  18776783 aaatagaacattgctcttttaaaaaaaattatattttgattttatcactgacctcttttcatttccagagccgagcctccgaattctcagggacggccct 18776684  T
Q  214 g 214  Q
    |    
T  18776683 g 18776683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 141; E-Value: 3e-73
Query Start/End: Original strand, 216 - 412
Target Start/End: Original strand, 12504963 - 12505159
Alignment:
Q  216 gtctactctgtcatgctcacccgtgaccccacattgcccatccgaatgttccacctcaaatgtcgtacctccctgggatgtgatccacatgatatcaatc 315  Q
    |||||||| |||||||||| ||||||||||||||||||||||||| ||||||||||||||||| ||||||| | ||||||| |||| |||||||||||||    
T  12504963 gtctactcagtcatgctcatccgtgaccccacattgcccatccgattgttccacctcaaatgtggtacctcaccgggatgttatcctcatgatatcaatc 12505062  T
Q  316 gatttgttcctgttgctgtcaaaaaaggaattgagaatctcatcttagattttactaacgctggtcacgattttctaatcagattaagtcctacttt 412  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||   |||| ||||||||||||||||||||||| ||| ||||||    
T  12505063 gatttgttcctgttgctgtcaaaaaaggaattgagaatctcatcttagattttaccggcgctagtcacgattttctaatcagattaggtcttacttt 12505159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 141; E-Value: 3e-73
Query Start/End: Original strand, 14 - 214
Target Start/End: Original strand, 29077205 - 29077404
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||||||    
T  29077205 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctcttggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatat 29077304  T
Q  114 aaatagaacattgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccct 213  Q
    ||||||||||||||||||||         || ||||||||||||||||||||||||||||||| | ||||||||||||||||||||||| ||||||||||    
T  29077305 aaatagaacattgctcttttaaaaaaaa-tacgttttgattttatcactgacctcttttcattcccagagccgagcctccgaattctcagggacggccct 29077403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 138; E-Value: 2e-71
Query Start/End: Original strand, 14 - 211
Target Start/End: Complemental strand, 8171656 - 8171460
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  8171656 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcatctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatat 8171557  T
Q  114 aaatagaacattgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggcc 211  Q
    ||||||||||||||||||||         || | ||||||||||||||||||||||||||||| | ||||||||||||||||||||||| ||||||||    
T  8171556 aaatagaacattgctcttttaaaaaaaa-tacgctttgattttatcactgacctcttttcattcccagagccgagcctccgaattctcagggacggcc 8171460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 133; E-Value: 2e-68
Query Start/End: Original strand, 216 - 412
Target Start/End: Original strand, 12483533 - 12483729
Alignment:
Q  216 gtctactctgtcatgctcacccgtgaccccacattgcccatccgaatgttccacctcaaatgtcgtacctccctgggatgtgatccacatgatatcaatc 315  Q
    |||||||| |||||||||| |||||||||||||||||| |||||| |||||||||||| |||| ||||||| | ||||||| |||| |||||||||||||    
T  12483533 gtctactcagtcatgctcatccgtgaccccacattgcctatccgattgttccacctcatatgtggtacctctccgggatgttatcctcatgatatcaatc 12483632  T
Q  316 gatttgttcctgttgctgtcaaaaaaggaattgagaatctcatcttagattttactaacgctggtcacgattttctaatcagattaagtcctacttt 412  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||   |||| ||||||||||||||||||||||| ||| ||||||    
T  12483633 gatttgttcctgttgctgtcaaaaaaggaattgagaatctcatcttagattttaccggcgctagtcacgattttctaatcagattaggtcttacttt 12483729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 122; E-Value: 6e-62
Query Start/End: Original strand, 14 - 214
Target Start/End: Complemental strand, 12596404 - 12596207
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||| |||||||||    
T  12596404 tttggtgttaggtgggggttcctcatgcatacggtagtcattttcacctctgggtgtaccacatatatacggcaccttgtatttatctttaaaaaaatat 12596305  T
Q  114 aaatagaacattgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccct 213  Q
    ||||||||||| |||||||           | |||||||||||||||||| |||||||||||| | ||||||||||||||||||||||| ||||||||||    
T  12596304 aaatagaacatcgctctttaaaaaaaa---acgttttgattttatcactggcctcttttcattcccagagccgagcctccgaattctcagggacggccct 12596208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 115; E-Value: 9e-58
Query Start/End: Original strand, 14 - 215
Target Start/End: Complemental strand, 20091398 - 20091196
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||| |||||||||||||||||||||    
T  20091398 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaatat 20091299  T
Q  114 aaatagaacattg-ctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccc 212  Q
    ||||||| |||||  | ||||         || |||||||||||||||||| ||||||||||||   ||||||||||||||||||||| | |||||||||    
T  20091298 aaatagatcattgttttttttaaaaaaaaatacgttttgattttatcactggcctcttttcattctcagagccgagcctccgaattcttagggacggccc 20091199  T
Q  213 tgt 215  Q
    |||    
T  20091198 tgt 20091196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 114; E-Value: 4e-57
Query Start/End: Original strand, 14 - 215
Target Start/End: Complemental strand, 10329527 - 10329326
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    |||||||||| ||||||||| |||||||||||||||||||||||||||| ||||| | || ||||||||||||||||| |||||||||||||||||||||    
T  10329527 tttggtgttaagtgggggtttctcatgtatacggtagtcattttcacctttgggttttcctcatatatacggcaccttatatttatcttttaaaaaatat 10329428  T
Q  114 aaatagaacattgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccct 213  Q
    ||||||||||||||| ||||         || |||||||||||||||||| |||||||||||| | ||||||||||||||||||||| | | ||||||||    
T  10329427 aaatagaacattgcttttttttaaaaaaatacgttttgattttatcactggcctcttttcattcccagagccgagcctccgaattcttaggaacggccct 10329328  T
Q  214 gt 215  Q
    ||    
T  10329327 gt 10329326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 106; E-Value: 2e-52
Query Start/End: Original strand, 14 - 214
Target Start/End: Complemental strand, 23551188 - 23550988
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaa-aaaata 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||| | ||||||||||||||| |||||| |||||||||||||| ||||||    
T  23551188 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctttggatgtaccgcatatatacgacaccttatatttatcttttaaaaaaata 23551089  T
Q  113 taaatagaacattgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccc 212  Q
    |||||||| ||||||| ||||         ||||||||||||||||||||| ||||||||||||   ||||||||||||||||||||| | ||||| |||    
T  23551088 taaatagatcattgct-ttttttaaaaaaatatgttttgattttatcactggcctcttttcattctcagagccgagcctccgaattcttagggacgaccc 23550990  T
Q  213 tg 214  Q
    ||    
T  23550989 tg 23550988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 104; E-Value: 3e-51
Query Start/End: Original strand, 14 - 214
Target Start/End: Original strand, 10955469 - 10955671
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||| |||||||||||||||||||||    
T  10955469 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgagtgtaccgcatatatacggcaccttatatttatcttttaaaaaatat 10955568  T
Q  114 aaatagaacattgctcttttnnnnnnnnttatgt--tttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggcc 211  Q
    ||||||||||| ||||||||          |     |||||||| ||||||||||||| |||||| |  |||| |||||||||||||||||||||| |||    
T  10955569 aaatagaacatcgctcttttaaaaaaaaaaaaaaaatttgatttaatcactgacctctattcattccccgagctgagcctccgaattctcatggacagcc 10955668  T
Q  212 ctg 214  Q
    |||    
T  10955669 ctg 10955671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 104; E-Value: 3e-51
Query Start/End: Original strand, 51 - 214
Target Start/End: Original strand, 26254015 - 26254178
Alignment:
Q  51 tcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctcttttnnnnnnnnttatgtttt 150  Q
    ||||||||| || ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||         ||||||||    
T  26254015 tcattttcatctttgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctcttttaaaaaaaaatatgtttt 26254114  T
Q  151 gattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccctg 214  Q
    |||||||||||||||||||||||||| | | ||||||||||||||||||||| |||| ||||||    
T  26254115 gattttatcactgacctcttttcattcccaaagccgagcctccgaattctcagggacagccctg 26254178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 101; E-Value: 2e-49
Query Start/End: Original strand, 14 - 214
Target Start/End: Original strand, 19692079 - 19692279
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    |||||||||||| | ||||||||||||||||||  |||||||||||||| | ||| ||||||||||||| |||||||| |||||||||||||||||||||    
T  19692079 tttggtgttaggcgagggttcctcatgtatacgaaagtcattttcacctttaggtgtaccgcatatatatggcaccttatatttatcttttaaaaaatat 19692178  T
Q  114 aaatagaacattgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccct 213  Q
    ||||||||||||||||||||         || ||||||||||||||||||  | ||||||||||| |||||||||| |||||||||| | ||| ||||||    
T  19692179 aaatagaacattgctcttttaaaaaaaaatacgttttgattttatcactggacacttttcatttccagagccgagcttccgaattcttagggagggccct 19692278  T
Q  214 g 214  Q
    |    
T  19692279 g 19692279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 101; E-Value: 2e-49
Query Start/End: Original strand, 14 - 214
Target Start/End: Complemental strand, 38414993 - 38414793
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||| ||||| |||| |||||||||| |||||| ||||||||||||||||||||     
T  38414993 tttggtgttaggtgggggttcctcatgtatacagtagtcattttcacctttgggtgtaccacatatatacgtcaccttatatttatcttttaaaaaatac 38414894  T
Q  114 aaatagaacattgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccct 213  Q
    ||||||||| ||||||||||         || ||||||||||||| |||   ||||||||||||| |||| |||||||||||||||| | ||||| ||||    
T  38414893 aaatagaacgttgctcttttgcaaaaaaatacgttttgattttatgactagtctcttttcatttccagagtcgagcctccgaattcttagggacgaccct 38414794  T
Q  214 g 214  Q
    |    
T  38414793 g 38414793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 94; E-Value: 3e-45
Query Start/End: Original strand, 14 - 214
Target Start/End: Complemental strand, 24525802 - 24525599
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| | ||||| ||||||||||| |||||||||| |||||||||||||||||||||    
T  24525802 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacttttgggtgtaccgcatatacacggcaccttatatttatcttttaaaaaatat 24525703  T
Q  114 aaatagaacattgctctt---ttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggc 210  Q
    ||||||||||||| | ||              || |||||||||||||||| | |||||||||||| | ||||||||||||||||||||| | ||||| |    
T  24525702 aaatagaacattgtttttaaaaaaaaaaaaaatacgttttgattttatcacaggcctcttttcattcccagagccgagcctccgaattcttagggacgac 24525603  T
Q  211 cctg 214  Q
    ||||    
T  24525602 cctg 24525599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 94; E-Value: 3e-45
Query Start/End: Original strand, 14 - 214
Target Start/End: Complemental strand, 48983961 - 48983756
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||| ||||| ||||||||||||||| |||||| |||||||||||||||||||||    
T  48983961 tttggtgttaggtgggggttcctcatgtatacggtagttattttcacctttgggtgtaccgcatatatacgacaccttatatttatcttttaaaaaatat 48983862  T
Q  114 aaatagaacattgctctttt-----nnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacg 208  Q
    ||||||| ||||| | ||||              || ||||||||||||||| || ||||||||||||   ||||||||||||||||||||| | |||||    
T  48983861 aaatagatcattgttttttttaaaaaaaaaaaaatacgttttgattttatcattggcctcttttcattctcagagccgagcctccgaattcttagggacg 48983762  T
Q  209 gccctg 214  Q
    ||||||    
T  48983761 gccctg 48983756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 91; E-Value: 2e-43
Query Start/End: Original strand, 18 - 214
Target Start/End: Complemental strand, 47985083 - 47984885
Alignment:
Q  18 gtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaa-aaaatataaa 116  Q
    ||||||||||||||||||||||||||||||| ||||||||||||| ||||| |||||||||||||||||||||| ||||| |||||||| ||||||||||    
T  47985083 gtgttaggtgggggttcctcatgtatacggtggtcattttcacctttgggtgtaccgcatatatacggcaccttatatttttcttttaaaaaaatataaa 47984984  T
Q  117 tagaacattgctctttt-nnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccctg 214  Q
    |||||||||||| ||||           | |||||||||||||||||| | |||||||||| | |||||||||||  |||||||| | |||||||||||    
T  47984983 tagaacattgcttttttaaaaaaaaaacacgttttgattttatcactggcatcttttcattcccagagccgagccaacgaattcttagggacggccctg 47984885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 90; E-Value: 7e-43
Query Start/End: Original strand, 34 - 214
Target Start/End: Original strand, 28749715 - 28749895
Alignment:
Q  34 cctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctctttt 133  Q
    |||||||||||||||||| |||||||| |||| || ||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||    
T  28749715 cctcatgtatacggtagt-attttcacatctgagtgtaccgcatatatacggcaccttgtatttatcttttcaaaaatataaatagaatattgctctttt 28749813  T
Q  134 -nnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccctg 214  Q
              |||||||||||||||||| ||  ||||||||||| | ||||||||||||||||||| ||| |||||||||||    
T  28749814 gaaaaaaaaatatgttttgattttatcattggtctcttttcattcccagagccgagcctccgaattttcagggacggccctg 28749895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 83; E-Value: 1e-38
Query Start/End: Original strand, 14 - 215
Target Start/End: Original strand, 25010418 - 25010612
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatctttt--aaaaaat 111  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||          |||||| ||||||||||||  |||||||    
T  25010418 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctttgggtgtaccgc----------caccttatatttatcttttaaaaaaaat 25010507  T
Q  112 ataaatagaacattgc-tcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggc 210  Q
    ||||||||| |||||| | ||||         || |||||||||||||||||| |||||||||||||| ||||||||||||||||||||| | |||||||    
T  25010508 ataaatagatcattgcttttttttttaaaaaatacgttttgattttatcactggcctcttttcatttccagagccgagcctccgaattcttagggacggc 25010607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 82; E-Value: 4e-38
Query Start/End: Original strand, 14 - 212
Target Start/End: Original strand, 8239670 - 8239869
Alignment:
Q  14 tttggtgttaggtgg--gggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaat 111  Q
    |||||||||| ||||  ||||||||||| ||||||||| |||||||||| | ||||| |||| |||||||||||||| || ||||||| |||||||||||    
T  8239670 tttggtgttaagtggaggggttcctcatatatacggtaatcattttcacatttgggtgtaccacatatatacggcacattatatttattttttaaaaaat 8239769  T
Q  112 ataaatagaacattgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggcc 211  Q
    |||||||||||||| |||||||         || ||||| ||||||||| || |||||||||||||| |||||||||||||| |||||| | ||||||||    
T  8239770 ataaatagaacattactcttttaaaaaaaa-tacgttttcattttatcattggcctcttttcatttccagagccgagcctccaaattcttagggacggcc 8239868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 68; E-Value: 1e-29
Query Start/End: Original strand, 33 - 132
Target Start/End: Complemental strand, 9021898 - 9021799
Alignment:
Q  33 tcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctcttt 132  Q
    ||||||||||||||||||| |||||||||| ||||| ||||||||||||||||||| |||||||||||||||||||||| ||||||| | |||| |||||    
T  9021898 tcctcatgtatacggtagtgattttcacctttgggtgtaccgcatatatacggcacattgtatttatcttttaaaaaatttaaatagcaaattgttcttt 9021799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 65; E-Value: 6e-28
Query Start/End: Original strand, 52 - 132
Target Start/End: Complemental strand, 33162418 - 33162338
Alignment:
Q  52 cattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctcttt 132  Q
    ||||||||||| | ||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  33162418 cattttcacctttaggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagagcattgctcttt 33162338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 30 - 133
Target Start/End: Complemental strand, 2611363 - 2611260
Alignment:
Q  30 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctc 129  Q
    |||||||||||||||| || || |||||||||  || || ||||||||||||||| |||||||||||||||||||||||||| |||||||||||||| ||    
T  2611363 ggttcctcatgtatacagttgtgattttcaccattgtgtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatttaaatagaacattgttc 2611264  T
Q  130 tttt 133  Q
    ||||    
T  2611263 tttt 2611260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 61; E-Value: 2e-25
Query Start/End: Original strand, 33 - 125
Target Start/End: Original strand, 23859077 - 23859169
Alignment:
Q  33 tcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacatt 125  Q
    ||||||||||||||||||| ||||||| || ||||| || ||||||||||||| || |||||||||||||||||||||| |||||||||||||    
T  23859077 tcctcatgtatacggtagtaattttcatctttgggtgtatcgcatatatacggtacattgtatttatcttttaaaaaatttaaatagaacatt 23859169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 60; E-Value: 6e-25
Query Start/End: Original strand, 30 - 133
Target Start/End: Original strand, 7398452 - 7398555
Alignment:
Q  30 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctc 129  Q
    ||||||||||||||| |||||| |||||||||| | ||| || | |||||||| |||||||||||||||||||| ||||||| |||||||||||||| ||    
T  7398452 ggttcctcatgtatatggtagtgattttcacctttaggtgtatcacatatatatggcaccttgtatttatctttcaaaaaatttaaatagaacattgttc 7398551  T
Q  130 tttt 133  Q
    ||||    
T  7398552 tttt 7398555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 57; E-Value: 4e-23
Query Start/End: Original strand, 1084 - 1212
Target Start/End: Original strand, 12659034 - 12659162
Alignment:
Q  1084 tgaggatgattggaaggaaccagaaattattccaaactgcttttcctctcaactaagaacatgctcgcttatagattacaaaggcatgaagtgtgagctt 1183  Q
    |||||| |||||||||||||||| |||| |||| || ||| ||||||||||||| ||||||||||| |||| || | | | ||||| || || |||||||    
T  12659034 tgaggacgattggaaggaaccagcaattgttccgaaatgcatttcctctcaacttagaacatgctcacttaaagctcatagaggcaggacgtatgagctt 12659133  T
Q  1184 cagtttgcagagtatgttttgaagaatgc 1212  Q
    ||||||||||||||| || ||||||||||    
T  12659134 cagtttgcagagtatattatgaagaatgc 12659162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 41 - 132
Target Start/End: Complemental strand, 6765771 - 6765680
Alignment:
Q  41 tatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctcttt 132  Q
    ||||||||||| |||||||||| ||| | ||| || |||||||| |||||||||||||||||||||||||| |||||||||||||| |||||    
T  6765771 tatacggtagtgattttcacctttggatgtacggcttatatacgacaccttgtatttatcttttaaaaaatttaaatagaacattgttcttt 6765680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 30 - 125
Target Start/End: Original strand, 36891579 - 36891674
Alignment:
Q  30 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacatt 125  Q
    |||||||||||||||||||||| |||||||||| ||| | ||||| ||||||||  ||| ||||||| ||| ||||||||||||||||||||||||    
T  36891579 ggttcctcatgtatacggtagtgattttcacctttggatgtaccgaatatatacaacacattgtattcatcatttaaaaaatataaatagaacatt 36891674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 53; E-Value: 9e-21
Query Start/End: Original strand, 41 - 133
Target Start/End: Original strand, 23744808 - 23744900
Alignment:
Q  41 tatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctctttt 133  Q
    ||||||||||| ||||| | || | ||| |||||||||||| ||||||||||||||||||||||||||||| ||| |||||||||| ||||||    
T  23744808 tatacggtagtgatttttatctttaggtgtaccgcatatatgcggcaccttgtatttatcttttaaaaaatttaattagaacattgttctttt 23744900  T

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Target: chr7; HSP #33
Raw Score: 52; E-Value: 4e-20
Query Start/End: Original strand, 30 - 125
Target Start/End: Original strand, 12981327 - 12981422
Alignment:
Q  30 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacatt 125  Q
    |||||||||| ||||| ||||| |||||||||| || || |||||| |||||| || ||||||||||||||||||||||||  |||||||||||||    
T  12981327 ggttcctcatatatacagtagtgattttcacctttgtgtgtaccgcgtatatatggaaccttgtatttatcttttaaaaaaattaaatagaacatt 12981422  T

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Target: chr7; HSP #34
Raw Score: 52; E-Value: 4e-20
Query Start/End: Original strand, 30 - 133
Target Start/End: Complemental strand, 27237524 - 27237421
Alignment:
Q  30 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctc 129  Q
    ||||||||||||||||| |||| |||||||||| | | |  | | |||||||||  |||||||||||||||||||||||||| |||||||||||||| ||    
T  27237524 ggttcctcatgtatacgatagtgattttcacctttagattcatcacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaacattgttc 27237425  T
Q  130 tttt 133  Q
    ||||    
T  27237424 tttt 27237421  T

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Target: chr7; HSP #35
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 146 - 208
Target Start/End: Complemental strand, 40357365 - 40357303
Alignment:
Q  146 gttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacg 208  Q
    |||||||||||||||||||||| |||||||||| ||||||||||||||||||||||| |||||    
T  40357365 gttttgattttatcactgaccttttttcatttccagagccgagcctccgaattctcaaggacg 40357303  T

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Target: chr7; HSP #36
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 833 - 957
Target Start/End: Original strand, 12658793 - 12658917
Alignment:
Q  833 gagcatcaagttcacgcttttcataacttaactcacatggagcttatattcacatcaaattggcgtaccaaatggaagtggttgctagaaatgctgaaga 932  Q
    ||||| |||||||||  ||||||||||||||||  |||||||||||| ||    |||| |||| ||||||||||||||||| |||||||| ||||  |      
T  12658793 gagcaacaagttcacaattttcataacttaacttgcatggagcttatttttgggtcaagttggtgtaccaaatggaagtgggtgctagaattgcttgaac 12658892  T
Q  933 attgccctaaacttcaaaatcttac 957  Q
    |||||||||| ||||||||||||||    
T  12658893 attgccctaagcttcaaaatcttac 12658917  T

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Target: chr7; HSP #37
Raw Score: 48; E-Value: 9e-18
Query Start/End: Original strand, 34 - 125
Target Start/End: Original strand, 20153206 - 20153297
Alignment:
Q  34 cctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacatt 125  Q
    |||||||||||||| ||| ||||||| || ||||| || |||||||||||  ||| |||||||||||||||||||||| |||||| ||||||    
T  20153206 cctcatgtatacggcagtgattttcatctttgggtttatcgcatatatacaacactttgtatttatcttttaaaaaatttaaataaaacatt 20153297  T

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Target: chr7; HSP #38
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 33 - 131
Target Start/End: Complemental strand, 36903022 - 36902924
Alignment:
Q  33 tcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctctt 131  Q
    ||||||||||||| ||| | |||||||||| | ||| |||  |||||||||| || ||||||||||||| ||||||||| |||||||||||||| ||||    
T  36903022 tcctcatgtatacagtactgattttcacctttaggtgtacaacatatatacgacatcttgtatttatctattaaaaaatttaaatagaacattgttctt 36902924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 292 - 351
Target Start/End: Original strand, 12646526 - 12646585
Alignment:
Q  292 gatgtgatccacatgatatcaatcgatttgttcctgttgctgtcaaaaaaggaattgaga 351  Q
    |||| ||||||||||||||||||||||| ||||||||||||||  |||||||||||||||    
T  12646526 gatgcgatccacatgatatcaatcgattcgttcctgttgctgtggaaaaaggaattgaga 12646585  T

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Target: chr7; HSP #40
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 840 - 957
Target Start/End: Original strand, 12646986 - 12647103
Alignment:
Q  840 aagttcacgcttttcataacttaactcacatggagcttatattcacatcaaattggcgtaccaaatggaagtggttgctagaaatgctgaagaattgccc 939  Q
    |||||||| || ||||||||||||| |||||||||||| ||||  | ||||||||||  || |||||||||||| || ||||| ||||  |  |||| ||    
T  12646986 aagttcacactcttcataacttaacccacatggagcttgtatttgcgtcaaattggcagacgaaatggaagtggctggtagaagtgctcgaacattgtcc 12647085  T
Q  940 taaacttcaaaatcttac 957  Q
    ||| ||||||||||||||    
T  12647086 taagcttcaaaatcttac 12647103  T

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Target: chr7; HSP #41
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 1124 - 1299
Target Start/End: Original strand, 11378395 - 11378570
Alignment:
Q  1124 ttttcctctcaactaagaacatgctcgcttatagattacaaaggcatgaagtgtgagcttcagtttgcagagtatgttttgaagaatgccaacttactgc 1223  Q
    ||||| ||||| || | |||||| || ||||||| ||| ||||||||||| |||||  ||||||||||| | ||| ||||||||||||| ||  || |||    
T  11378395 ttttcatctcagcttaaaacatgttcccttataggttataaaggcatgaattgtgactttcagtttgcaaaatatattttgaagaatgcaaaagtattgc 11378494  T
Q  1224 gcacgatgacaattagtgcctctccaggggatttaactttaaagcaccaaatgctaatggatttatctttgtgtcc 1299  Q
      || |||||||| | ||||||||| | |||| |||   ||||||||||||| |||||  | ||| ||||||||||    
T  11378495 agacaatgacaatcaatgcctctcctgtggatataaacataaagcaccaaattctaatcaagttaactttgtgtcc 11378570  T

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Target: chr7; HSP #42
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 30 - 133
Target Start/End: Complemental strand, 12419596 - 12419493
Alignment:
Q  30 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctc 129  Q
    |||||||||||||| |  |||| ||||||| || ||| | || | || ||||| || || |||||||||||||||||||||| |||||||||||||| ||    
T  12419596 ggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacattgttc 12419497  T
Q  130 tttt 133  Q
    ||||    
T  12419496 tttt 12419493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 46 - 132
Target Start/End: Complemental strand, 21763672 - 21763586
Alignment:
Q  46 ggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctcttt 132  Q
    |||||| |||||||| | | ||| || ||||||||||||  || |||||||||||||||||||||| ||||||||||| || |||||    
T  21763672 ggtagtgattttcactttttggtgtatcgcatatatacgatactttgtatttatcttttaaaaaatttaaatagaacaatgttcttt 21763586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 30 - 126
Target Start/End: Original strand, 18201138 - 18201234
Alignment:
Q  30 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattg 126  Q
    |||||||||||| || ||||   |||||||||  | ||| |||| |||||||| |||| ||||||||||| ||||||||||| |||||||| |||||    
T  18201138 ggttcctcatgtgtaaggtaacgattttcacccttaggtgtaccacatatatatggcatcttgtatttatattttaaaaaatttaaatagatcattg 18201234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 1141 - 1208
Target Start/End: Complemental strand, 12623313 - 12623246
Alignment:
Q  1141 aacatgctcgcttatagattacaaaggcatgaagtgtgagcttcagtttgcagagtatgttttgaaga 1208  Q
    ||||||||||||||||| ||  ||||||||||||||||||||  |||||| ||||||  |||||||||    
T  12623313 aacatgctcgcttatagcttttaaaggcatgaagtgtgagctaaagtttgtagagtacattttgaaga 12623246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 1139 - 1278
Target Start/End: Original strand, 12652648 - 12652787
Alignment:
Q  1139 agaacatgctcgcttatagattacaaaggcatgaagtgtgagcttcagtttgcagagtatgttttgaagaatgccaacttactgcgcacgatgacaatta 1238  Q
    |||||||| || ||||||| ||| ||||| |||||||  ||| ||||||||||||||||  ||||||||||||| ||  |||| | ||| |||||||| |    
T  12652648 agaacatgttcacttataggttataaaggtatgaagtccgagtttcagtttgcagagtacattttgaagaatgcaaaagtactccacaccatgacaatca 12652747  T
Q  1239 gtgcctctccaggggatttaactttaaagcaccaaatgct 1278  Q
     ||| || ||||  ||| | | | ||||||||||||||||    
T  12652748 ctgcttcaccagttgatatcaatataaagcaccaaatgct 12652787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 30 - 118
Target Start/End: Complemental strand, 9014863 - 9014782
Alignment:
Q  30 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaata 118  Q
    |||| ||||||||||||||||| |||||||||| |||||       ||||||||| ||| |||||||||||||||| ||||| ||||||    
T  9014863 ggttactcatgtatacggtagtgattttcacctttgggt-------atatatacgacacattgtatttatcttttacaaaatttaaata 9014782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 1047 - 1292
Target Start/End: Original strand, 12647189 - 12647428
Alignment:
Q  1047 tatgtggattttgacagctttatggacatggtattgatgaggatgattggaaggaaccagaaattattccaaactgcttttcctctcaactaagaacatg 1146  Q
    |||||||||||| | ||||||||||| |||| | ||  |||||  |||||||| ||||| ||||| ||||| | ||| ||| ||||||||| ||||||||    
T  12647189 tatgtggattttaatagctttatggatatggaactggcgaggacaattggaagaaaccaaaaattgttccagaatgcatttactctcaacttagaacatg 12647288  T
Q  1147 ctcgcttatagattacaaaggcatgaagtgtgagcttcagtttgcagagtatgttttgaagaatgccaacttactgcgcacgatgacaattagtgcctct 1246  Q
     || |||| |  ||| |||||||       ||||||||| || ||| ||||| || | |||||||| ||  || ||||||| |||||||| | ||||||     
T  12647289 ttcacttacatcttataaaggca------atgagcttcaattcgcaaagtatattattaagaatgcaaaagtaatgcgcaccatgacaataattgcctcg 12647382  T
Q  1247 ccaggggatttaactttaaagcaccaaatgctaatggatttatctt 1292  Q
    || | |||| | | | |||||||||||||| ||||| | |||||||    
T  12647383 ccggtggatatgaatataaagcaccaaatgataatgaaattatctt 12647428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 31 - 109
Target Start/End: Original strand, 38971255 - 38971333
Alignment:
Q  31 gttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaa 109  Q
    ||||||| ||| ||||||||| |||||||| | | ||| ||   |||||||||| ||||||||||||||||||||||||    
T  38971255 gttcctcgtgtttacggtagtgattttcacatttaggtgtataacatatatacgacaccttgtatttatcttttaaaaa 38971333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 76 - 132
Target Start/End: Complemental strand, 9014233 - 9014177
Alignment:
Q  76 atatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctcttt 132  Q
    ||||||||  ||| |||||||||||||||||||||| |||||| ||||||| |||||    
T  9014233 atatatacaacacattgtatttatcttttaaaaaatttaaataaaacattgttcttt 9014177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 264 - 324
Target Start/End: Original strand, 12540059 - 12540119
Alignment:
Q  264 ttccacctcaaatgtcgtacctccctgggatgtgatccacatgatatcaatcgatttgttc 324  Q
    |||| |||||||||| || |||||| |||||| || ||||| |||||||||||||||||||    
T  12540059 ttccgcctcaaatgtggtgcctcccagggatgcgacccacaagatatcaatcgatttgttc 12540119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 161; Significance: 3e-85; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 161; E-Value: 3e-85
Query Start/End: Original strand, 14 - 214
Target Start/End: Complemental strand, 13727517 - 13727317
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  13727517 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatat 13727418  T
Q  114 aaatagaacattgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccct 213  Q
    ||||||||||||||||||||        |||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||| ||||||||||    
T  13727417 aaatagaacattgctcttttaaaaaaaattatgttttgattttatcactggcctcttttcatttccagagccgagcctccgaattctcagggacggccct 13727318  T
Q  214 g 214  Q
    |    
T  13727317 g 13727317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 153; E-Value: 2e-80
Query Start/End: Original strand, 14 - 214
Target Start/End: Original strand, 21280533 - 21280733
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    |||||||||||||||| ||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  21280533 tttggtgttaggtgggagttcctcatgtatacggtagtcatttttacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatat 21280632  T
Q  114 aaatagaacattgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccct 213  Q
    ||||||||||||||||||||        |||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||| ||||||||||    
T  21280633 aaatagaacattgctcttttaaaaaaaattatgttttgattttatcactggcctcttttcatttccagagccgagcctccgaattctcagggacggccct 21280732  T
Q  214 g 214  Q
    |    
T  21280733 g 21280733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 146; E-Value: 3e-76
Query Start/End: Original strand, 14 - 214
Target Start/End: Original strand, 21479482 - 21479683
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  21479482 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatat 21479581  T
Q  114 aaatagaacattgctctttt-nnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccc 212  Q
    ||||||||||||||||||||         |||||||||||||||||||||| |||||||||||||| |||||||||||||| ||||||||  ||||||||    
T  21479582 aaatagaacattgctcttttaaaaaaaaattatgttttgattttatcactggcctcttttcatttccagagccgagcctccaaattctcagagacggccc 21479681  T
Q  213 tg 214  Q
    ||    
T  21479682 tg 21479683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 129; E-Value: 4e-66
Query Start/End: Original strand, 14 - 214
Target Start/End: Complemental strand, 27788806 - 27788608
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||| |||||||||||||||||||||    
T  27788806 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaatat 27788707  T
Q  114 aaatagaacattgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccct 213  Q
    |||||||| |||||||||||         || |||||||||||||||||| |||||||||||| | ||||||||||||||||||||| | ||||||||||    
T  27788706 aaatagaaaattgctcttttaaaaaaa--tacgttttgattttatcactggcctcttttcattcccagagccgagcctccgaattcttagggacggccct 27788609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 129; E-Value: 4e-66
Query Start/End: Original strand, 14 - 213
Target Start/End: Original strand, 33774105 - 33774305
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| | ||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  33774105 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacatttgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatat 33774204  T
Q  114 aaatagaacattgctctttt-nnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccc 212  Q
    |||||||||||| |||||||         ||||||||||||||||| |||| |||||||||||||  ||||||||||||||||||||||| ||| |||||    
T  33774205 aaatagaacattactcttttaaaaaaaaattatgttttgattttattactggcctcttttcattttcagagccgagcctccgaattctcaaggatggccc 33774304  T
Q  213 t 213  Q
    |    
T  33774305 t 33774305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 124; E-Value: 4e-63
Query Start/End: Original strand, 19 - 214
Target Start/End: Complemental strand, 20711833 - 20711638
Alignment:
Q  19 tgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaata 118  Q
    |||||| ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||| ||||||||||||||||||||||||||    
T  20711833 tgttagatgggggttcctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaatataaata 20711734  T
Q  119 gaacattgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccctg 214  Q
    |||||||||||||||         || ||||||||||||| ||||||||||||||||| | ||| ||||||||||||||||||| ||||| |||||    
T  20711733 gaacattgctcttttaaaaaaaaatacgttttgattttatgactgacctcttttcattcccagaaccgagcctccgaattctcagggacgtccctg 20711638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 122; E-Value: 6e-62
Query Start/End: Original strand, 14 - 215
Target Start/End: Original strand, 17353942 - 17354143
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    ||||||||||||||||||||| ||||||||||| ||||||||||||| | ||||| ||||||||||||||| |||||| |||||||||||||||||||||    
T  17353942 tttggtgttaggtgggggttcatcatgtatacgatagtcattttcacatttgggtgtaccgcatatatacgacaccttatatttatcttttaaaaaatat 17354041  T
Q  114 aaatagaacattgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccct 213  Q
    ||||||||||||||| ||||         || ||||||||||||||||||||||||||||||| |||||| |||||||||||||||| | ||||||||||    
T  17354042 aaatagaacattgctttttttaaaaaaaatacgttttgattttatcactgacctcttttcattccaagagtcgagcctccgaattcttagggacggccct 17354141  T
Q  214 gt 215  Q
    ||    
T  17354142 gt 17354143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 109; E-Value: 3e-54
Query Start/End: Original strand, 14 - 214
Target Start/End: Complemental strand, 30832642 - 30832443
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    ||||||||||||||||||||||||||| |||||||||||||||||| |||||||| |||| ||||||||||||| ||||||||||| ||||||||||| |    
T  30832642 tttggtgttaggtgggggttcctcatgcatacggtagtcattttcatctctgggtgtaccacatatatacggcatcttgtatttattttttaaaaaatgt 30832543  T
Q  114 aaatagaacattgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccct 213  Q
    ||||||||||| || |||||         || |||||||||||||||||| |||||||||||| | |||||||||||| |||||||||| ||||||||||    
T  30832542 aaatagaacatcgcgctttttaaaaaaa-tacgttttgattttatcactggcctcttttcattcccagagccgagccttcgaattctcagggacggccct 30832444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 108; E-Value: 1e-53
Query Start/End: Original strand, 14 - 133
Target Start/End: Complemental strand, 19737810 - 19737691
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| |||||||||    
T  19737810 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctaggtgtaccgcatatatacggcaccttgtatttatctttaaaaaaatat 19737711  T
Q  114 aaatagaacattgctctttt 133  Q
    ||||||||||||||||||||    
T  19737710 aaatagaacattgctctttt 19737691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 107; E-Value: 5e-53
Query Start/End: Original strand, 14 - 215
Target Start/End: Complemental strand, 24711117 - 24710913
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| || |||| |||||||||||||||||||||||||||||||||||||||    
T  24711117 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgagtgtaccacatatatacggcaccttgtatttatcttttaaaaaatat 24711018  T
Q  114 aaatagaacattgctcttt---tnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggc 210  Q
    |||||||||||  ||||||              | ||||||||||||||||| ||||||||||||| |  |||| ||||||||||||||||| |||||||    
T  24711017 aaatagaacatcactctttaaaaaaaaaaaaaaacgttttgattttatcactaacctcttttcattccctgagctgagcctccgaattctcagggacggc 24710918  T
Q  211 cctgt 215  Q
    |||||    
T  24710917 cctgt 24710913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 100; E-Value: 8e-49
Query Start/End: Original strand, 14 - 200
Target Start/End: Original strand, 28075771 - 28075960
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| || ||||||||||||||||||| |||||||||||||||||||||    
T  28075771 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctttgggtgtatcgcatatatacggcaccttatatttatcttttaaaaaatat 28075870  T
Q  114 aaatagaacattgctcttt---tnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattct 200  Q
    ||||||||||||||| |||             || ||||||||||| |||||| |||||||||||| | |||||||||||||| ||||||    
T  28075871 aaatagaacattgctttttaaaataaaaaaaatacgttttgattttttcactggcctcttttcattcccagagccgagcctccaaattct 28075960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 90; E-Value: 7e-43
Query Start/End: Original strand, 34 - 212
Target Start/End: Complemental strand, 1155947 - 1155767
Alignment:
Q  34 cctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctcttt- 132  Q
    ||||||||||||||||||||||||||||||||| | ||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||     
T  1155947 cctcatgtatacggtagtcattttcacctctggatgtaccgcatatatatgacaccttgtatttatcttttaaaaaatataaatagaacattgctcttta 1155848  T
Q  133 -tnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccc 212  Q
              |||  |||||||||||||||||||||||||||||| | ||| |||||||||| |||| | | |||||||||    
T  1155847 aaaaaaaaaattactttttgattttatcactgacctcttttcattcctagaaccgagcctccaaatttttagggacggccc 1155767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 88; E-Value: 1e-41
Query Start/End: Original strand, 52 - 214
Target Start/End: Complemental strand, 27314259 - 27314097
Alignment:
Q  52 cattttcacctctgggtataccgcatatatacggcaccttgtatttatc-ttttaaaaaatataaatagaacattgctcttttnnnnnnnnttatgtttt 150  Q
    |||||||||||||| || ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||         || |||||    
T  27314259 cattttcacctctgagtgtaccgcatatatacggcaccttgtatttatctttttaaaaaatataaatagaacattgctcttttaaaaaaaa-tacgtttt 27314161  T
Q  151 gattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccctg 214  Q
    ||||||||||||| |||||||||||| | |||| |||||||||||||| ||| |||||||||||    
T  27314160 gattttatcactggcctcttttcattcccagagtcgagcctccgaattttcagggacggccctg 27314097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 84; E-Value: 3e-39
Query Start/End: Original strand, 14 - 133
Target Start/End: Original strand, 34397845 - 34397964
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    |||||||||| |||| |||||||||||| |||| |||||||||| |||| | ||| ||||||||||||||| ||||||||||||||||||||||||||||    
T  34397845 tttggtgttaagtggaggttcctcatgtttacgatagtcatttttacctttaggtgtaccgcatatatacgtcaccttgtatttatcttttaaaaaatat 34397944  T
Q  114 aaatagaacattgctctttt 133  Q
    ||||||||||||||||||||    
T  34397945 aaatagaacattgctctttt 34397964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 77; E-Value: 4e-35
Query Start/End: Original strand, 1163 - 1299
Target Start/End: Complemental strand, 14987510 - 14987374
Alignment:
Q  1163 aaaggcatgaagtgtgagcttcagtttgcagagtatgttttgaagaatgccaacttactgcgcacgatgacaattagtgcctctccaggggatttaactt 1262  Q
    ||||| ||||||||||||||||| |||||||| ||||||||||| ||||| ||||||| |||||| ||||||||||  |||||| | |  |||||||||     
T  14987510 aaaggtatgaagtgtgagcttcattttgcagaatatgttttgaacaatgcaaacttaccgcgcacaatgacaattaacgcctcttctgaagatttaacta 14987411  T
Q  1263 taaagcaccaaatgctaatggatttatctttgtgtcc 1299  Q
    ||||| |||||||||||||||||||||||||||||||    
T  14987410 taaagtaccaaatgctaatggatttatctttgtgtcc 14987374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 70; E-Value: 6e-31
Query Start/End: Original strand, 14 - 200
Target Start/End: Complemental strand, 235343 - 235157
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatac--ggcaccttgtatttatcttttaaaaaat 111  Q
    ||||||||| |||||||||| ||||||||||||||||||||||||| || ||||| ||| | ||||||||  |||||||| |||||||||||||||||||    
T  235343 tttggtgtt-ggtgggggtttctcatgtatacggtagtcattttcatctttgggtgtacggtatatatacccggcaccttatatttatcttttaaaaaat 235245  T
Q  112 ataaatagaacattgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattct 200  Q
    ||||||||| ||||||| ||||         || ||||||||||||||||||  |||||||||||   | |||||| ||||||||||||    
T  235244 ataaatagatcattgct-ttttaaaaaaaaatacgttttgattttatcactggtctcttttcattctcatagccgaacctccgaattct 235157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 57; E-Value: 4e-23
Query Start/End: Original strand, 30 - 126
Target Start/End: Complemental strand, 2477686 - 2477590
Alignment:
Q  30 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattg 126  Q
    |||||||||||||||||||||| |||||||| | | ||| || |||||||||| | |||||||||||||||||||||||||| ||||| ||||||||    
T  2477686 ggttcctcatgtatacggtagtgattttcacattttggtgtatcgcatatatatgtcaccttgtatttatcttttaaaaaatttaaattgaacattg 2477590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 57; E-Value: 4e-23
Query Start/End: Original strand, 30 - 126
Target Start/End: Original strand, 6159442 - 6159538
Alignment:
Q  30 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattg 126  Q
    ||||||| || ||||||||||| |||| ||||| ||  | ||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||    
T  6159442 ggttccttatatatacggtagtgatttccacctttgaatgtaccgcatatatacgacacattgtatttatcttttaaaaaatataaatagaacattg 6159538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 30 - 121
Target Start/End: Complemental strand, 21183777 - 21183686
Alignment:
Q  30 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaa 121  Q
    |||||||||||||||||||||| ||||||| || ||||| |||| ||||||||||  || |||||||||||||||||||||| |||||||||    
T  21183777 ggttcctcatgtatacggtagtgattttcaactttgggtgtaccacatatatacgctactttgtatttatcttttaaaaaatttaaatagaa 21183686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 52; E-Value: 4e-20
Query Start/End: Original strand, 30 - 125
Target Start/End: Original strand, 20611794 - 20611889
Alignment:
Q  30 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacatt 125  Q
    |||||||||||||||||||||| |||||||||| ||| | |  || ||||||||| ||||||||||||||| |||||||||| ||| |||||||||    
T  20611794 ggttcctcatgtatacggtagtgattttcacctttggatgtgtcgtatatatacgacaccttgtatttatcgtttaaaaaatttaagtagaacatt 20611889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 43; E-Value: 0.000000000000008
Query Start/End: Original strand, 31 - 109
Target Start/End: Original strand, 4036953 - 4037031
Alignment:
Q  31 gttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaa 109  Q
    ||||||||| ||||||||||| || || |||| ||||| ||||  |||||||||||||||||||||||||| |||||||    
T  4036953 gttcctcatatatacggtagtgatctttacctttgggtgtaccatatatatacggcaccttgtatttatctcttaaaaa 4037031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 47 - 132
Target Start/End: Original strand, 30121783 - 30121868
Alignment:
Q  47 gtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctcttt 132  Q
    ||||| |||||||||| ||| | || |||||||||| | |||||||||||||| ||||||||||| |||||| ||||||| |||||    
T  30121783 gtagtgattttcacctttggatgtatcgcatatatatgacaccttgtatttattttttaaaaaatttaaataaaacattgttcttt 30121868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 155 - 200
Target Start/End: Original strand, 19987277 - 19987322
Alignment:
Q  155 ttatcactgacctcttttcatttcaagagccgagcctccgaattct 200  Q
    ||||||||||||||||||||||   |||||||| ||||||||||||    
T  19987277 ttatcactgacctcttttcattctgagagccgatcctccgaattct 19987322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 157; Significance: 8e-83; HSPs: 35)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 157; E-Value: 8e-83
Query Start/End: Original strand, 14 - 214
Target Start/End: Original strand, 4505878 - 4506078
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  4505878 tttggtgttaggtgggggttcctcatgtatacggtagtcatttttacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatat 4505977  T
Q  114 aaatagaacattgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccct 213  Q
    ||||||||||||||||||||        |||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||| ||||||||||    
T  4505978 aaatagaacattgctcttttaaaaaaaattatgttttgattttatcactggcctcttttcatttccagagccgagcctccgaattctcagggacggccct 4506077  T
Q  214 g 214  Q
    |    
T  4506078 g 4506078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 150; E-Value: 1e-78
Query Start/End: Original strand, 14 - 215
Target Start/End: Original strand, 3155201 - 3155402
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||    
T  3155201 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctaggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatat 3155300  T
Q  114 aaatagaacattgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccct 213  Q
    ||||||||||||||||||||        ||||||||| ||||||||||||||||||||||||||  | ||||||||||||||||||||| ||||||||||    
T  3155301 aaatagaacattgctcttttaaaaaaaattatgttttaattttatcactgacctcttttcatttttaaagccgagcctccgaattctcagggacggccct 3155400  T
Q  214 gt 215  Q
    ||    
T  3155401 gt 3155402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 143; E-Value: 2e-74
Query Start/End: Original strand, 14 - 211
Target Start/End: Original strand, 6964991 - 6965186
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||    
T  6964991 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacggcactttgtatttatcttttaaaaaatat 6965090  T
Q  114 aaatagaacattgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggcc 211  Q
    ||||||||||||||||||||        |||  ||||||||||||||||| |||||||||||||| ||||||||||||||||||||||| ||||||||    
T  6965091 aaatagaacattgctcttttaaaaaaaatta--ttttgattttatcactggcctcttttcatttccagagccgagcctccgaattctcagggacggcc 6965186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 135; E-Value: 1e-69
Query Start/End: Original strand, 14 - 215
Target Start/End: Complemental strand, 12337566 - 12337364
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||| | ||||||||||||||||||||||||||||    
T  12337566 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccacatatatatgacaccttgtatttatcttttaaaaaatat 12337467  T
Q  114 aaatagaacattgctctttt-nnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccc 212  Q
    ||||||||||||||||||||         |||| ||||||||||||||||| |||||||||||||| |||||||||||| |||||||||| |||||||||    
T  12337466 aaatagaacattgctcttttaaaaaaaaattatattttgattttatcactggcctcttttcatttccagagccgagccttcgaattctcagggacggccc 12337367  T
Q  213 tgt 215  Q
    |||    
T  12337366 tgt 12337364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 130; E-Value: 1e-66
Query Start/End: Original strand, 14 - 214
Target Start/End: Complemental strand, 8907197 - 8906996
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    |||||||||||||||||||| ||||||||||||||||||||||| |||||||||| ||||||||||||||||| ||||||||||||||||||||||||||    
T  8907197 tttggtgttaggtgggggtttctcatgtatacggtagtcatttttacctctgggtgtaccgcatatatacggcgccttgtatttatcttttaaaaaatat 8907098  T
Q  114 aaatagaacattgctctttt-nnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccc 212  Q
    |||||||||||| |||||||         |||||||||||||||||||||| |||||||||||||  ||||||||||||||||||||||| | |||||||    
T  8907097 aaatagaacattactcttttaaaaaaaaattatgttttgattttatcactggcctcttttcattttcagagccgagcctccgaattctcaggaacggccc 8906998  T
Q  213 tg 214  Q
    ||    
T  8906997 tg 8906996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 121; E-Value: 2e-61
Query Start/End: Original strand, 14 - 214
Target Start/End: Complemental strand, 29939980 - 29939781
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||| ||||| ||||||||||||||| ||||||||||||||||| ||||||||||    
T  29939980 tttggtgttaggtggtggttcctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacgacaccttgtatttatcttgtaaaaaatat 29939881  T
Q  114 aaatagaacattgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccct 213  Q
    ||||||||||||||||||||         || ||||||||||||||||||||||||||| ||| | |||||||||||| |||||||||| |||||| |||    
T  29939880 aaatagaacattgctcttttaaaaaaaa-tacgttttgattttatcactgacctctttttattcccagagccgagccttcgaattctcagggacggtcct 29939782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 115; E-Value: 9e-58
Query Start/End: Original strand, 18 - 215
Target Start/End: Original strand, 26716116 - 26716314
Alignment:
Q  18 gtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatctttt-aaaaaatataaa 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||| |||||||| |||||||||||| ||||||||||||    
T  26716116 gtgttaggtgggggttcctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatatggcaccttatatttatcttttaaaaaaatataaa 26716215  T
Q  117 tagaacattgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccctgt 215  Q
    |||||||||||||||||         || ||||||||||||||||||||||||||||||| | | |||||||||  |||||||| | ||||||||||||    
T  26716216 tagaacattgctcttttaaaaaaaaatacgttttgattttatcactgacctcttttcattcccaaagccgagccaacgaattcttagggacggccctgt 26716314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 113; E-Value: 1e-56
Query Start/End: Original strand, 14 - 214
Target Start/End: Original strand, 3952990 - 3953188
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    ||||||||||||||||||||||||||| |||||||| |||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||    
T  3952990 tttggtgttaggtgggggttcctcatgcatacggtaatcattttcacctctgggtgtaccgcatgtatacggcaccttgtatttatcttttaaaaaatat 3953089  T
Q  114 aaatagaacattgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccct 213  Q
    ||||||||||| | |||||          ||  |||||||||||||||||||||||||||||||| | |||||||||||| |||||||| ||||| ||||    
T  3953090 aaatagaacatcggtcttt--aaaaaaaatacattttgattttatcactgacctcttttcatttccaaagccgagcctccaaattctcagggacgaccct 3953187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 105; E-Value: 8e-52
Query Start/End: Original strand, 14 - 214
Target Start/End: Original strand, 7162768 - 7162967
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    ||||||||||||| |||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  7162768 tttggtgttaggtaggggttcctcatatatacggtagtcattttcacctctgagtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 7162867  T
Q  114 aaatagaacattgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccct 213  Q
    ||||||||||| ||||||||          |  |||| |||||||||||| |||||||||||| |  |||| |||||| |||| ||||| ||||||||||    
T  7162868 aaatagaacatcgctcttttaaaaaaaa-gacattttaattttatcactggcctcttttcattccccgagctgagccttcgaaatctcagggacggccct 7162966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 105; E-Value: 8e-52
Query Start/End: Original strand, 14 - 214
Target Start/End: Complemental strand, 27506858 - 27506659
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    |||||||||||||||| ||||||||||||||| ||||||||||| |||| ||||| |||| ||||||||||||||||| |||||||||||||||||||||    
T  27506858 tttggtgttaggtgggagttcctcatgtatacagtagtcatttttacctttgggtgtaccacatatatacggcaccttatatttatcttttaaaaaatat 27506759  T
Q  114 aaatagaacattgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccct 213  Q
    ||||||| ||||||| ||||         || |||||||||||||||||| ||||||||||||   ||||||||||||||||||||| | ||||||||||    
T  27506758 aaatagatcattgct-tttttttaaaaaatacgttttgattttatcactggcctcttttcattctcagagccgagcctccgaattcttagggacggccct 27506660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 103; E-Value: 1e-50
Query Start/End: Original strand, 14 - 211
Target Start/End: Complemental strand, 10762683 - 10762488
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||| ||||||||| ||||||| |||||||||||||||||||||    
T  10762683 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctttgggtgtaccacatatataccgcaccttatatttatcttttaaaaaatat 10762584  T
Q  114 aaatagaacattgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggcc 211  Q
    |||||||||||||||||||           | ||||| |||||||||||| |||||||||||| | ||||| |||||||| |||||| | ||||||||    
T  10762583 aaatagaacattgctctttaaaaaaaaa--acgttttaattttatcactggcctcttttcattcccagagctgagcctccaaattcttagggacggcc 10762488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 101; E-Value: 2e-49
Query Start/End: Original strand, 14 - 214
Target Start/End: Original strand, 24410420 - 24410623
Alignment:
Q  14 tttggtgttaggtgggg-gttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaata 112  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||| ||||||||||||||||||||    
T  24410420 tttggtgttaggtggggggttcctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaata 24410519  T
Q  113 taaatagaacattgctcttt--tnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggc 210  Q
    |||||||||||||| | |||            || |||||||||||||||||| |||||||||||| | | | ||||||||||||||||| | |||||||    
T  24410520 taaatagaacattgttttttaaaaaaaaaaaatacgttttgattttatcactggcctcttttcattcccaaaaccgagcctccgaattcttagggacggc 24410619  T
Q  211 cctg 214  Q
    ||||    
T  24410620 cctg 24410623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 98; E-Value: 1e-47
Query Start/End: Original strand, 18 - 214
Target Start/End: Original strand, 9046017 - 9046213
Alignment:
Q  18 gtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatctttt-aaaaaatataaa 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||| |||||||||||| ||||||||||||    
T  9046017 gtgttaggtgggggttcctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaaatataaa 9046116  T
Q  117 tagaacattgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccctg 214  Q
    |||||||||| ||||||         || |||||||||||||||||| |||||||| ||| | ||||| |||||  ||||||||   |||||||||||    
T  9046117 tagaacattgttcttttaaaaacaa-tacgttttgattttatcactggcctcttttaattcccagagctgagccaacgaattctttgggacggccctg 9046213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 95; E-Value: 8e-46
Query Start/End: Original strand, 56 - 210
Target Start/End: Original strand, 40636164 - 40636317
Alignment:
Q  56 ttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctcttttnnnnnnnnttatgttttgattt 155  Q
    ||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||         |||||||||||||    
T  40636164 ttcacctctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatataaatagaacattgctcttttaaaaaaaa-tatgttttgattt 40636262  T
Q  156 tatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggc 210  Q
    |||||||| |||||||||||| | ||||| ||||||||||||||||| |||||||    
T  40636263 tatcactggcctcttttcattcccagagctgagcctccgaattctcagggacggc 40636317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 94; E-Value: 3e-45
Query Start/End: Original strand, 46 - 211
Target Start/End: Original strand, 34693991 - 34694155
Alignment:
Q  46 ggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctcttttnnnnnnnnttat 145  Q
    |||||||||||| |||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||         ||     
T  34693991 ggtagtcattttgacctctgggtgtaccacatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctcttttaaaaaaaa-tac 34694089  T
Q  146 gttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggcc 211  Q
    |||||||||||||||| | |||||||||||||| ||| |||| |||||||||||||| ||||||||    
T  34694090 gttttgattttatcacgggcctcttttcatttccagatccgaacctccgaattctcagggacggcc 34694155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 94; E-Value: 3e-45
Query Start/End: Original strand, 46 - 211
Target Start/End: Original strand, 34716403 - 34716567
Alignment:
Q  46 ggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctcttttnnnnnnnnttat 145  Q
    |||||||||||| |||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||         ||     
T  34716403 ggtagtcattttgacctctgggtgtaccacatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctcttttaaaaaaaa-tac 34716501  T
Q  146 gttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggcc 211  Q
    |||||||||||||||| | |||||||||||||| ||| |||| |||||||||||||| ||||||||    
T  34716502 gttttgattttatcacgggcctcttttcatttccagatccgaacctccgaattctcagggacggcc 34716567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 74; E-Value: 3e-33
Query Start/End: Original strand, 56 - 208
Target Start/End: Complemental strand, 5952791 - 5952642
Alignment:
Q  56 ttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctcttttnnnnnnnnttatgttttgattt 155  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||  ||||||| ||||||||||||||         || ||||||||||    
T  5952791 ttcacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaa--ataaatataacattgctcttttaaaaaaaa-tacgttttgattt 5952695  T
Q  156 tatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacg 208  Q
    ||||| || |||||||||||| | |||||||| |||||||||||||| |||||    
T  5952694 tatcattggcctcttttcattccgagagccgaacctccgaattctcagggacg 5952642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 72; E-Value: 4e-32
Query Start/End: Original strand, 30 - 133
Target Start/End: Original strand, 16097008 - 16097111
Alignment:
Q  30 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctc 129  Q
    ||||||||||||||| |||||| |||||||||| ||||| |||  ||||||||||||||||||||||||||||||||||||| |||||||||||||| ||    
T  16097008 ggttcctcatgtataaggtagtaattttcacctttgggtgtacatcatatatacggcaccttgtatttatcttttaaaaaatttaaatagaacattgttc 16097107  T
Q  130 tttt 133  Q
    ||||    
T  16097108 tttt 16097111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 70; E-Value: 6e-31
Query Start/End: Original strand, 101 - 214
Target Start/End: Complemental strand, 1396730 - 1396617
Alignment:
Q  101 ttttaaaaaatataaatagaacattgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattct 200  Q
    |||||||||||||||||||||||||||||||||        |||||||||||||||||||||| |||||||||||||| |||| ||||||||||||||||    
T  1396730 ttttaaaaaatataaatagaacattgctcttttaaaaaaaattatgttttgattttatcactggcctcttttcatttccagagtcgagcctccgaattct 1396631  T
Q  201 catggacggccctg 214  Q
    || ||| |||||||    
T  1396630 caaggaaggccctg 1396617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 66; E-Value: 2e-28
Query Start/End: Original strand, 32 - 133
Target Start/End: Complemental strand, 24035645 - 24035544
Alignment:
Q  32 ttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctctt 131  Q
    |||||||||||| ||||||| |||||||||| | ||| || ||||| ||||||||||||||||||||||||||||||||| |||||||||||||| ||||    
T  24035645 ttcctcatgtatgcggtagtgattttcacctttaggtgtatcgcatttatacggcaccttgtatttatcttttaaaaaatttaaatagaacattgttctt 24035546  T
Q  132 tt 133  Q
    ||    
T  24035545 tt 24035544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 62; E-Value: 4e-26
Query Start/End: Original strand, 30 - 131
Target Start/End: Original strand, 38400798 - 38400899
Alignment:
Q  30 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctc 129  Q
    |||||||||||||||||||||| |||||||||| ||  | || |||||||||| | |||||||||||||||||||||||||| |||||||||||||| ||    
T  38400798 ggttcctcatgtatacggtagtgattttcacctttgaatgtatcgcatatatatgacaccttgtatttatcttttaaaaaatttaaatagaacattgttc 38400897  T
Q  130 tt 131  Q
    ||    
T  38400898 tt 38400899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 57; E-Value: 4e-23
Query Start/End: Original strand, 30 - 133
Target Start/End: Complemental strand, 13800647 - 13800543
Alignment:
Q  30 ggttcctcatgtatacggtagtcattttcacctct-gggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgct 128  Q
    |||||||| ||||||  ||||| |||||||||| | |||| || ||||||||||||||||||| ||||||||||||||||||| |||||||||||||| |    
T  13800647 ggttcctcgtgtatatagtagtgattttcaccttttgggtgtatcgcatatatacggcaccttatatttatcttttaaaaaatttaaatagaacattgtt 13800548  T
Q  129 ctttt 133  Q
    |||||    
T  13800547 ctttt 13800543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 30 - 133
Target Start/End: Complemental strand, 12134142 - 12134039
Alignment:
Q  30 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctc 129  Q
    ||||||| |||||||||||||| |||||||| | ||||| || ||||||||||||| |||||||||||||||||||||   | |||||||||||||| ||    
T  12134142 ggttcctaatgtatacggtagtgattttcacttttgggtgtatcgcatatatacggtaccttgtatttatcttttaaattttttaaatagaacattgttc 12134043  T
Q  130 tttt 133  Q
    ||||    
T  12134042 tttt 12134039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 30 - 133
Target Start/End: Complemental strand, 21665802 - 21665699
Alignment:
Q  30 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctc 129  Q
    |||||||||||||||||||||| |||||||| | | | | || | |||||||||| |||| ||||||||||||||||||||| |||||||||||||| ||    
T  21665802 ggttcctcatgtatacggtagtgattttcacattttgatgtatcacatatatacgacaccgtgtatttatcttttaaaaaatttaaatagaacattgttc 21665703  T
Q  130 tttt 133  Q
    ||||    
T  21665702 tttt 21665699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 30 - 133
Target Start/End: Complemental strand, 28425812 - 28425709
Alignment:
Q  30 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctc 129  Q
    |||||||||| |||| |||||| |||||||| | ||||| ||| ||||||||||| |||||||||||||||||||||||  | |||||||||||||| ||    
T  28425812 ggttcctcatatatatggtagtgattttcacatttgggtgtactgcatatatacgacaccttgtatttatcttttaaaatttttaaatagaacattgttc 28425713  T
Q  130 tttt 133  Q
    ||||    
T  28425712 tttt 28425709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 30 - 133
Target Start/End: Complemental strand, 7742236 - 7742132
Alignment:
Q  30 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaa-aaaatataaatagaacattgct 128  Q
    ||||||||||| ||||| ||||  ||||||||| ||| | || |||||||||| | ||| ||||||||||||||||| |||||||||||||||||||| |    
T  7742236 ggttcctcatgcatacgatagtatttttcacctttggatgtaacgcatatatatgacacattgtatttatcttttaaaaaaatataaatagaacattgtt 7742137  T
Q  129 ctttt 133  Q
    |||||    
T  7742136 ctttt 7742132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 86 - 198
Target Start/End: Original strand, 8327674 - 8327785
Alignment:
Q  86 caccttgtatttatcttttaaaaaatataaatagaacattgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagcc 185  Q
    |||||| |||||||||||||||||||||||||||| ||||||| ||||        | | ||||||||||||||||||| ||||||||||||| ||| |     
T  8327674 caccttatatttatcttttaaaaaatataaatagatcattgcttttttaaaaaaaat-acgttttgattttatcactgatctcttttcatttccagaact 8327772  T
Q  186 gagcctccgaatt 198  Q
    |||||||||||||    
T  8327773 gagcctccgaatt 8327785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 30 - 132
Target Start/End: Complemental strand, 16227470 - 16227368
Alignment:
Q  30 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctc 129  Q
    ||||||| |||||||  ||||| ||||||| || | ||| || | |||||||||| |||||||||||||||||||||||||| ||||||||| |||| ||    
T  16227470 ggttccttatgtatatagtagtgattttcatctatcggtgtatcacatatatacgacaccttgtatttatcttttaaaaaatttaaatagaaaattgttc 16227371  T
Q  130 ttt 132  Q
    |||    
T  16227370 ttt 16227368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 30 - 198
Target Start/End: Complemental strand, 11912859 - 11912691
Alignment:
Q  30 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctc 129  Q
    ||||||| |||||||||||||| ||||||| || ||| | ||  ||||||||||||||| |||||||||| ||||   |||| |||||||||||||| ||    
T  11912859 ggttccttatgtatacggtagtgattttcatctttggatgtattgcatatatacggcactttgtatttatttttttttaaatttaaatagaacattgttc 11912760  T
Q  130 ttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaatt 198  Q
    |||          |||||||| ||||||| || ||  |||||||| ||  |||||||||||||||||||    
T  11912759 tttaaaaaaaatatatgtttttattttattacggatatcttttcacttatagagccgagcctccgaatt 11912691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 30 - 99
Target Start/End: Original strand, 37182670 - 37182739
Alignment:
Q  30 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttat 99  Q
    |||||||||||||||||||||| |||||||| | ||||| ||  ||||||||||| ||||||||||||||    
T  37182670 ggttcctcatgtatacggtagtgattttcacttttgggtgtattgcatatatacgacaccttgtatttat 37182739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 36 - 104
Target Start/End: Complemental strand, 22727598 - 22727530
Alignment:
Q  36 tcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatctttt 104  Q
    ||||||||| |||||| |||||||| | ||||| ||||||||||||||| ||| | |||||||||||||    
T  22727598 tcatgtatatggtagtgattttcacttttgggtgtaccgcatatatacgtcacatagtatttatctttt 22727530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 53 - 132
Target Start/End: Original strand, 42029168 - 42029247
Alignment:
Q  53 attttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctcttt 132  Q
    |||||||||| | ||| |||  ||| |||| | |||||| ||||||||||||||||||| |||||||||||||| |||||    
T  42029168 attttcacctttaggtgtacaacatgtatatgacaccttatatttatcttttaaaaaatttaaatagaacattgttcttt 42029247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 92 - 133
Target Start/End: Complemental strand, 22727497 - 22727456
Alignment:
Q  92 gtatttatcttttaaaaaatataaatagaacattgctctttt 133  Q
    |||||||||||||||||||| |||||||||||||| ||||||    
T  22727497 gtatttatcttttaaaaaatttaaatagaacattgttctttt 22727456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 76 - 132
Target Start/End: Complemental strand, 11952643 - 11952588
Alignment:
Q  76 atatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctcttt 132  Q
    ||||||||| ||| ||||||| |||||||||||||| |||||||||||||| |||||    
T  11952643 atatatacgacactttgtatt-atcttttaaaaaatttaaatagaacattgttcttt 11952588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 86 - 125
Target Start/End: Original strand, 10252472 - 10252511
Alignment:
Q  86 caccttgtatttatcttttaaaaaatataaatagaacatt 125  Q
    |||||||||||||||||||||||||| ||||| |||||||    
T  10252472 caccttgtatttatcttttaaaaaatttaaattgaacatt 10252511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 153; Significance: 2e-80; HSPs: 37)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 153; E-Value: 2e-80
Query Start/End: Original strand, 14 - 214
Target Start/End: Complemental strand, 54619321 - 54619121
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  54619321 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatat 54619222  T
Q  114 aaatagaacattgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccct 213  Q
    ||||||||||||||||||||        ||||||||||||||||||| || | |||||||||||| ||||||||||||||||||||||| ||||||||||    
T  54619221 aaatagaacattgctcttttaaaaaaaattatgttttgattttatcattggcttcttttcatttccagagccgagcctccgaattctcagggacggccct 54619122  T
Q  214 g 214  Q
    |    
T  54619121 g 54619121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 149; E-Value: 5e-78
Query Start/End: Original strand, 14 - 214
Target Start/End: Complemental strand, 38681211 - 38681011
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||| | ||||||||| ||||||||||||||||||||||||||||||||||    
T  38681211 tttggtgttaggtggggtttcctcatgtatacggtagtcattttcacctctggatgtaccgcatacatacggcaccttgtatttatcttttaaaaaatat 38681112  T
Q  114 aaatagaacattgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccct 213  Q
    ||||||||||||||||||||        |||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||| ||||||||||    
T  38681111 aaatagaacattgctcttttaaaaaaaattatgttttgattttatcactggcctcttttcatttccagagccgagcctccgaattctcagggacggccct 38681012  T
Q  214 g 214  Q
    |    
T  38681011 g 38681011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 142; E-Value: 7e-74
Query Start/End: Original strand, 14 - 214
Target Start/End: Complemental strand, 27078687 - 27078486
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    ||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  27078687 tttggtgttaggtaggggtttctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcactttgtatttatcttttaaaaaatat 27078588  T
Q  114 aaatagaacattgctctttt-nnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccc 212  Q
    ||||||||||||||| ||||         ||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||| |||||||||    
T  27078587 aaatagaacattgcttttttaaaaaaaaattatgttttgattttatcactgacctcttttcatttccagagccaagcctccgaattctcagggacggccc 27078488  T
Q  213 tg 214  Q
    ||    
T  27078487 tg 27078486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 142; E-Value: 7e-74
Query Start/End: Original strand, 14 - 214
Target Start/End: Complemental strand, 27084484 - 27084283
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    ||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  27084484 tttggtgttaggtaggggtttctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcactttgtatttatcttttaaaaaatat 27084385  T
Q  114 aaatagaacattgctctttt-nnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccc 212  Q
    ||||||||||||||| ||||         ||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||| |||||||||    
T  27084384 aaatagaacattgcttttttaaaaaaaaattatgttttgattttatcactgacctcttttcatttccagagccaagcctccgaattctcagggacggccc 27084285  T
Q  213 tg 214  Q
    ||    
T  27084284 tg 27084283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 137; E-Value: 7e-71
Query Start/End: Original strand, 14 - 214
Target Start/End: Original strand, 47467672 - 47467872
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||    
T  47467672 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtatcgcatatatacggcaccttgtatttatcttttaaaaaatat 47467771  T
Q  114 aaatagaacattgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccct 213  Q
    ||||||||||| |||||||           | ||||||||||||||||||||||||||||||| | ||||||||||||||||||||||| ||||||||||    
T  47467772 aaatagaacatcgctctttaaaaaaaaaacacgttttgattttatcactgacctcttttcattcccagagccgagcctccgaattctcagggacggccct 47467871  T
Q  214 g 214  Q
    |    
T  47467872 g 47467872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 135; E-Value: 1e-69
Query Start/End: Original strand, 14 - 215
Target Start/End: Complemental strand, 36716143 - 36715941
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    ||||||||||||||||||| ||||| ||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  36716143 tttggtgttaggtgggggtccctcacgtatacggtggtcgttttcacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatat 36716044  T
Q  114 aaatagaacattgctctttt-nnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccc 212  Q
    ||||||||||||||||||||         ||||||||| |||||||||||| |||||||||||||| ||||||||||||||||||||||| |||||||||    
T  36716043 aaatagaacattgctcttttaaataaaaattatgtttttattttatcactggcctcttttcatttccagagccgagcctccgaattctcagggacggccc 36715944  T
Q  213 tgt 215  Q
    |||    
T  36715943 tgt 36715941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 130; E-Value: 1e-66
Query Start/End: Original strand, 14 - 214
Target Start/End: Original strand, 21582759 - 21582960
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  21582759 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatat 21582858  T
Q  114 aaatagaacattgctctttt-nnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccc 212  Q
    ||||| ||||||| ||||||          || |||||||||||||||||| |||||||||||| | | ||||||||||||||||||||| |||||||||    
T  21582859 aaataaaacattgttcttttaaaaaaaaaatacgttttgattttatcactggcctcttttcattcccaaagccgagcctccgaattctcagggacggccc 21582958  T
Q  213 tg 214  Q
    ||    
T  21582959 tg 21582960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 126; E-Value: 2e-64
Query Start/End: Original strand, 14 - 219
Target Start/End: Complemental strand, 8073455 - 8073252
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    |||||||||| |||||| ||||||||||||||||||||||||||||| | ||||| ||||||||||||||| ||||||||||||||||||||||||||||    
T  8073455 tttggtgttatgtgggg-ttcctcatgtatacggtagtcattttcacttttgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatat 8073357  T
Q  114 aaatagaacattgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccct 213  Q
    |||||||||||| |||||||         || ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||    
T  8073356 aaatagaacattactcttttaaaaaaaa-tacgttttgattttatcactgacctcttttcatttccagagccgagcctccgaattctcagggacggccct 8073258  T
Q  214 gtgtct 219  Q
    | ||||    
T  8073257 gagtct 8073252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 126; E-Value: 2e-64
Query Start/End: Original strand, 14 - 215
Target Start/End: Complemental strand, 34290754 - 34290553
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||| ||||| |||||||||||||||||||||| |||||||||||||||||||||    
T  34290754 tttggtgttaggtgggggttcctcatatatacggtagtcattttcacctttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaatat 34290655  T
Q  114 aaatagaacattgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccct 213  Q
    ||||||||||||| | ||||         || |||||||||||||||||||| |||||||||| | ||||||||||||||||||||| | ||||||||||    
T  34290654 aaatagaacattgtttttttaaaaaaaaatacgttttgattttatcactgacttcttttcattcccagagccgagcctccgaattcttaaggacggccct 34290555  T
Q  214 gt 215  Q
    ||    
T  34290554 gt 34290553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 121; E-Value: 2e-61
Query Start/End: Original strand, 14 - 214
Target Start/End: Original strand, 42098789 - 42098989
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    |||||||||| || |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  42098789 tttggtgttaagtaggggttcctcatgtatacggtagtcattttcacctctgagtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 42098888  T
Q  114 aaatagaacattgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccct 213  Q
    ||||||||||| ||||||||          |  ||||||||||||||||| ||||||||||||||  |||| |||||| |||||||||| ||||||||||    
T  42098889 aaatagaacatcgctcttttaaaaaaaaagacattttgattttatcactggcctcttttcatttcccgagctgagccttcgaattctcagggacggccct 42098988  T
Q  214 g 214  Q
    |    
T  42098989 g 42098989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 120; E-Value: 9e-61
Query Start/End: Original strand, 14 - 213
Target Start/End: Complemental strand, 3954014 - 3953816
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    |||||||||||||||||||||||||||||||||||  |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  3954014 tttggtgttaggtgggggttcctcatgtatacggttttcattttcacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatat 3953915  T
Q  114 aaatagaacattgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccct 213  Q
    ||||||||||||| ||||||         ||  |||| |||||||||||| |||||||||||||| ||||| || |||||||||||||| ||||||||||    
T  3953914 aaatagaacattgttcttttaaaaaaaa-tacattttaattttatcactggcctcttttcatttccagagcggaacctccgaattctcagggacggccct 3953816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 117; E-Value: 6e-59
Query Start/End: Original strand, 18 - 210
Target Start/End: Original strand, 37168359 - 37168551
Alignment:
Q  18 gtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaat 117  Q
    |||||||||||| |||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||| |||||||||||||||||||||||||    
T  37168359 gtgttaggtgggagttcctcatgtatacggtagtcattttcacctttgggtataccacatatatacggcaccttatatttatcttttaaaaaatataaat 37168458  T
Q  118 agaacattgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggc 210  Q
    ||||||||| | ||||         || |||||||||||||||||| |||||||||||| | ||||||||||||||||||||| | |||||||    
T  37168459 agaacattgtttttttaaaaaaaaatacgttttgattttatcactggcctcttttcattcccagagccgagcctccgaattcttagggacggc 37168551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 110; E-Value: 9e-55
Query Start/End: Original strand, 14 - 215
Target Start/End: Complemental strand, 43207355 - 43207156
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||  | |||||||||||||||||||||| |||||||||||||||||||||    
T  43207355 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctttga-tgtaccgcatatatacggcaccttatatttatcttttaaaaaatat 43207257  T
Q  114 aaatagaacattgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccct 213  Q
    ||||||||||||||||||||         || ||||| | |||||||||| |||||||||||| | |||||||||||||| |||||| | ||||||||||    
T  43207256 aaatagaacattgctcttttaaaaaaaa-tacgtttttaatttatcactggcctcttttcattcccagagccgagcctccaaattcttagggacggccct 43207158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 109; E-Value: 3e-54
Query Start/End: Original strand, 14 - 210
Target Start/End: Original strand, 44708465 - 44708660
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||| |||||||||||||||| |||||||||||||||||||||    
T  44708465 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctttgggtgtaccggatatatacggcaccttatatttatcttttaaaaaatat 44708564  T
Q  114 aaatagaacattgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggc 210  Q
    |||||||||||| || ||||         || |||||||||||||||||| |||||||||||| | ||||  ||||||||||||||| | |||||||    
T  44708565 aaatagaacatttct-ttttttaaaaaaatacgttttgattttatcactggcctcttttcattcccagagttgagcctccgaattcttagggacggc 44708660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 106; E-Value: 2e-52
Query Start/End: Original strand, 14 - 211
Target Start/End: Complemental strand, 53149432 - 53149235
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    |||||||||||||||||||||||||||||||||||||||||||| | ||||| || ||||||||||||||||||||||||||||||||||||||||||||    
T  53149432 tttggtgttaggtgggggttcctcatgtatacggtagtcatttttatctctgagtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatat 53149333  T
Q  114 aaatagaacattgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggcc 211  Q
    ||||||||||| ||||||||          | ||||||||||||||||||  ||||||||||| |  || | |||||||||||||||||  |||||||    
T  53149332 aaatagaacatcgctcttttaaaaaaaaaaacgttttgattttatcactggtctcttttcattccccgaactgagcctccgaattctcagagacggcc 53149235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 106; E-Value: 2e-52
Query Start/End: Original strand, 14 - 214
Target Start/End: Complemental strand, 53507002 - 53506802
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||| ||||| |||||||||||||||| ||||| |||||||||||||||||||||    
T  53507002 tttggtgttaggtgggggtttctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacggtaccttatatttatcttttaaaaaatat 53506903  T
Q  114 aaatagaacattgctctttt-nnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccc 212  Q
    ||||||||||||| | ||||          ||||||||||||||||||||| ||||| |||||| | |||||||||||| |||||||| | |||||||||    
T  53506902 aaatagaacattgtttttttaaaaaaaaaatatgttttgattttatcactggcctctcttcattcccagagccgagccttcgaattctta-ggacggccc 53506804  T
Q  213 tg 214  Q
    ||    
T  53506803 tg 53506802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 104; E-Value: 3e-51
Query Start/End: Original strand, 14 - 202
Target Start/End: Original strand, 18372467 - 18372658
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgc----atatatacggcaccttgtatttatcttttaaaaa 109  Q
    ||||||||||| ||||| |||||||||||||||||||||||||||||||||| || ||||||    ||||||||| ||||||||||||||||||||||||    
T  18372467 tttggtgttagatggggattcctcatgtatacggtagtcattttcacctctgtgtgtaccgcgcgcatatatacgacaccttgtatttatcttttaaaaa 18372566  T
Q  110 atataaatagaacattgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctca 202  Q
    ||||||||||||||||||||||||         || ||||||||||||||||||||||||||||||| | || | ||||||||||||||||||    
T  18372567 atataaatagaacattgctcttttaaaaaaaa-tacgttttgattttatcactgacctcttttcattcccagtgtcgagcctccgaattctca 18372658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 101; E-Value: 2e-49
Query Start/End: Original strand, 14 - 214
Target Start/End: Complemental strand, 50939351 - 50939152
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    |||||||||||| ||||||||||||||||||||||||||||||| |||| ||||| ||||  |||||||||||||||| |||||||||||||||||||||    
T  50939351 tttggtgttaggcgggggttcctcatgtatacggtagtcatttttacctttgggtgtaccatatatatacggcaccttatatttatcttttaaaaaatat 50939252  T
Q  114 aaatagaacattgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccct 213  Q
    ||||||| ||||||| ||||         || |||||||||||||||||| ||||||||||||   ||||||||||| ||||||||| | ||||||||||    
T  50939251 aaatagatcattgct-ttttttaaaaaaatacgttttgattttatcactggcctcttttcattctcagagccgagcccccgaattcttagggacggccct 50939153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 99; E-Value: 3e-48
Query Start/End: Original strand, 34 - 211
Target Start/End: Original strand, 36605973 - 36606149
Alignment:
Q  34 cctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatc-ttttaaaaaatataaatagaacattgctcttt 132  Q
    |||||||||||||||||| ||||||| |||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |    
T  36605973 cctcatgtatacggtagt-attttcatctctgggtgtaccgcatatatacggcaccttgtatttatctttttaaaaaatataaatagaacattgctctat 36606071  T
Q  133 tnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggcc 211  Q
    |         || ||||||||||||||||||||||||||||||||| |||||||| |||||||||| ||| ||||||||    
T  36606072 taaaaaaaa-tacgttttgattttatcactgacctcttttcatttccagagccgaacctccgaattttcagggacggcc 36606149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 95; E-Value: 8e-46
Query Start/End: Original strand, 25 - 214
Target Start/End: Complemental strand, 50258731 - 50258542
Alignment:
Q  25 gtgggggttcctcatgtatacggtagtcattttcacc-tctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaaca 123  Q
    |||||||||||||||| ||||  |||||||||||||| || |||| ||||||||||||||| |||||||||||||| |||||||||||||||||||||||    
T  50258731 gtgggggttcctcatgcatacaatagtcattttcaccctccgggtgtaccgcatatatacgacaccttgtatttattttttaaaaaatataaatagaaca 50258632  T
Q  124 ttgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccctg 214  Q
    | ||||||||         |||||||||||||||||||||| |||||||| || | ||||||||||||||||||||||| | |||||||||    
T  50258631 tcgctctttttaaaaaaa-tatgttttgattttatcactgatctcttttcgttcccagagccgagcctccgaattctcaggaacggccctg 50258542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 94; E-Value: 3e-45
Query Start/End: Original strand, 14 - 214
Target Start/End: Complemental strand, 54407275 - 54407073
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    |||||||||||||||||||| || ||||||||||||||||||||||||| ||| | |||||||||||||||||||||| |||||||||||||||||||||    
T  54407275 tttggtgttaggtgggggttact-atgtatacggtagtcattttcacctttggatgtaccgcatatatacggcaccttatatttatcttttaaaaaatat 54407177  T
Q  114 aaatagaacattg---ctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggc 210  Q
    |||||||||||||    | ||||          | |||||||||||||||| | |||||||||||| | ||||||||||||||||||||| | |||||||    
T  54407176 aaatagaacattgttttttttttaaaaaaaaaaacgttttgattttatcaccggcctcttttcattcccagagccgagcctccgaattcttagggacggc 54407077  T
Q  211 cctg 214  Q
    ||||    
T  54407076 cctg 54407073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 87; E-Value: 5e-41
Query Start/End: Original strand, 14 - 176
Target Start/End: Complemental strand, 9878805 - 9878644
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    ||||| ||||| ||||||||||| ||||||||| ||||||||||||||| ||||| |||||||||||||| ||||||| |||||||||||||||||||||    
T  9878805 tttggcgttagatgggggttccttatgtatacgatagtcattttcacctttgggtgtaccgcatatatactgcaccttatatttatcttttaaaaaatat 9878706  T
Q  114 aaatagaacattgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatt 176  Q
    |||||||| |||||||||||         || |||| ||||||||||||||||||||||||||    
T  9878705 aaatagaatattgctcttttaaaaaaaa-tacgtttagattttatcactgacctcttttcatt 9878644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 78; E-Value: 1e-35
Query Start/End: Original strand, 16 - 97
Target Start/End: Complemental strand, 29620504 - 29620423
Alignment:
Q  16 tggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtattt 97  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  29620504 tggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctggatataccgcatatatacggcaccttgtattt 29620423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 60; E-Value: 6e-25
Query Start/End: Original strand, 30 - 133
Target Start/End: Complemental strand, 54574929 - 54574826
Alignment:
Q  30 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctc 129  Q
    ||||||||||||||| |||||| ||||| || | ||||| |||||||||||||||| ||||||||||||| |||| |||||| |||||||||||||| ||    
T  54574929 ggttcctcatgtatatggtagtgatttttacttttgggtgtaccgcatatatacggtaccttgtatttatattttgaaaaatttaaatagaacattgttc 54574830  T
Q  130 tttt 133  Q
    ||||    
T  54574829 tttt 54574826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 35 - 125
Target Start/End: Complemental strand, 28689458 - 28689368
Alignment:
Q  35 ctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacatt 125  Q
    ||||||||||||| ||| |||||||||| ||| |||| ||||||||||||||||||||||||||||||||  ||||| |||||||||||||    
T  28689458 ctcatgtatacggcagtgattttcacctttggatatatcgcatatatacggcaccttgtatttatctttttgaaaatttaaatagaacatt 28689368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 30 - 125
Target Start/End: Original strand, 8420330 - 8420425
Alignment:
Q  30 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacatt 125  Q
    |||||||| | ||||||| ||| |||||||| | ||||| |||  ||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  8420330 ggttcctcgtatatacggcagtgattttcacatttgggtgtacaacatatatacggcaccttgtatttatcttttaaaaaatttaaatagaacatt 8420425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 14 - 200
Target Start/End: Original strand, 48157127 - 48157302
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    |||| ||||| ||||||||||||||||||||| |||||||||||||||| ||||| ||||||          |||||| |||||||||||||||||||||    
T  48157127 tttgatgttaagtgggggttcctcatgtatacagtagtcattttcacctttgggtgtaccgc----------caccttatatttatcttttaaaaaatat 48157216  T
Q  114 aaatagaacattgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattct 200  Q
    ||||||| ||||||  ||||         | ||||||||||||||||||| |||||||| ||| |  || |||||||||||||||||    
T  48157217 aaatagatcattgc-attttttttaaaaatgtgttttgattttatcactggcctctttttattcccggaaccgagcctccgaattct 48157302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 52; E-Value: 4e-20
Query Start/End: Original strand, 30 - 125
Target Start/End: Complemental strand, 32319257 - 32319162
Alignment:
Q  30 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacatt 125  Q
    |||||||| | |||| | |||| |||||||||| ||||| ||||||||||||||  ||| |||||||||||||||||||||| |||||||||||||    
T  32319257 ggttcctcgtatataagatagtaattttcacctttgggtgtaccgcatatatacaacactttgtatttatcttttaaaaaatttaaatagaacatt 32319162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 152 - 214
Target Start/End: Complemental strand, 29620426 - 29620364
Alignment:
Q  152 attttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccctg 214  Q
    ||||||||||||||||||||||||| | ||||||||||||||||||||||| |||||||||||    
T  29620426 attttatcactgacctcttttcattcccagagccgagcctccgaattctcagggacggccctg 29620364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 50; E-Value: 6e-19
Query Start/End: Original strand, 35 - 132
Target Start/End: Original strand, 49393099 - 49393195
Alignment:
Q  35 ctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctcttt 132  Q
    ||||||||||||||||| ||||| |||| ||||| |||  |||||||||| | |||||||||||||||||||||||| |||| ||||||||| |||||    
T  49393099 ctcatgtatacggtagtaatttttacctttgggtgtaca-catatatacgacgccttgtatttatcttttaaaaaatttaaagagaacattgttcttt 49393195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 30 - 132
Target Start/End: Original strand, 25855426 - 25855527
Alignment:
Q  30 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctc 129  Q
    ||||| || ||||||||||||| ||||||| || |||||  ||  |||||||||| ||||||||||| |||||||||||||| |||||||||||||| ||    
T  25855426 ggttcttcgtgtatacggtagtgattttcaactttgggtgcactacatatatacgacaccttgtatt-atcttttaaaaaatttaaatagaacattgttc 25855524  T
Q  130 ttt 132  Q
    |||    
T  25855525 ttt 25855527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 47 - 133
Target Start/End: Original strand, 26279563 - 26279649
Alignment:
Q  47 gtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctctttt 133  Q
    ||||| ||||||| || ||||| ||  ||||||||||| |||||| ||||||||||||||||||| |||||||||||||| ||||||    
T  26279563 gtagtgattttcatctttgggtgtattgcatatatacgacaccttctatttatcttttaaaaaatttaaatagaacattgttctttt 26279649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 146 - 215
Target Start/End: Complemental strand, 48720497 - 48720428
Alignment:
Q  146 gttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccctgt 215  Q
    ||||||||||||||||| ||||||||||||| | |||||||||||||| |||||| | ||||||||||||    
T  48720497 gttttgattttatcacttacctcttttcattcccagagccgagcctcccaattcttagggacggccctgt 48720428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 70 - 121
Target Start/End: Complemental strand, 23641380 - 23641329
Alignment:
Q  70 taccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaa 121  Q
    ||||||||||||||| ||| ||||||||||||||||||||||||||||||||    
T  23641380 taccgcatatatacgacacattgtatttatcttttaaaaaatataaatagaa 23641329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 43; E-Value: 0.000000000000008
Query Start/End: Original strand, 30 - 132
Target Start/End: Original strand, 789940 - 790042
Alignment:
Q  30 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctc 129  Q
    ||||||||||||||| ||| || ||||| |||| ||||| |||  |||||||| | ||||||||||||||  |||||||||| ||||||||| |||| ||    
T  789940 ggttcctcatgtatatggtggtgatttttacctttgggtgtacaacatatatatgacaccttgtatttattgtttaaaaaatttaaatagaagattgttc 790039  T
Q  130 ttt 132  Q
    |||    
T  790040 ttt 790042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 73 - 133
Target Start/End: Original strand, 42453451 - 42453511
Alignment:
Q  73 cgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctctttt 133  Q
    |||||||||| | |||||||||||||||||||||||||| ||||| |||||||| ||||||    
T  42453451 cgcatatatatgacaccttgtatttatcttttaaaaaatttaaattgaacattgttctttt 42453511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 30 - 133
Target Start/End: Original strand, 52374660 - 52374763
Alignment:
Q  30 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctc 129  Q
    ||||| |||||||||||||||| |||||| ||| | | | || ||||| |||||| ||| |||||||||| |   ||||||| |||||||||||||| ||    
T  52374660 ggttcttcatgtatacggtagtgattttctcctttagatgtatcgcatctatacgacacattgtatttatttaaaaaaaaatttaaatagaacattgttc 52374759  T
Q  130 tttt 133  Q
    ||||    
T  52374760 tttt 52374763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 149; Significance: 5e-78; HSPs: 46)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 149; E-Value: 5e-78
Query Start/End: Original strand, 14 - 202
Target Start/End: Complemental strand, 34756481 - 34756293
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  34756481 tttgttgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatat 34756382  T
Q  114 aaatagaacattgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctca 202  Q
    ||||||||||||||||||||        |||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||    
T  34756381 aaatagaacattgctcttttaaaaaaaattatgttttgattttatcactggcctcttttcatttccagagccgagcctccgaattctca 34756293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 129; E-Value: 4e-66
Query Start/End: Original strand, 14 - 214
Target Start/End: Complemental strand, 36187994 - 36187795
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    ||||||||||||||| |||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||    
T  36187994 tttggtgttaggtggaggtttctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacggcaccttgtatttatattttaaaaaatat 36187895  T
Q  114 aaatagaacattgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccct 213  Q
    ||||||||||| ||||||||          | ||||||||||||||||||||||||||||||| | ||||||||||||||||||||||| ||||||||||    
T  36187894 aaatagaacatcgctcttttaaaaaaaa-aacgttttgattttatcactgacctcttttcattcccagagccgagcctccgaattctcagggacggccct 36187796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 126; E-Value: 2e-64
Query Start/End: Original strand, 14 - 214
Target Start/End: Original strand, 27078996 - 27079197
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||| | ||| ||||||||||||||||||||||||||||||||||||||||||||    
T  27078996 tttggtgttaggtgggggttcctcatgtatacagtagtcattttcacctttaggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatat 27079095  T
Q  114 aaatagaacattgctctttt-nnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccc 212  Q
    ||||||||||||||||||||          || |||||||||||||||||| ||||||||||||   ||||||||||||||||||||||| |||||||||    
T  27079096 aaatagaacattgctcttttaaaaaaaaaatacgttttgattttatcactggcctcttttcattctcagagccgagcctccgaattctcagggacggccc 27079195  T
Q  213 tg 214  Q
    ||    
T  27079196 tg 27079197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 125; E-Value: 1e-63
Query Start/End: Original strand, 14 - 214
Target Start/End: Complemental strand, 15480204 - 15480006
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||| || |||||||||||||||||||||||||    
T  15480204 tttggtgttaggtgggggttcctcatgcatacggtagtcattttcacctctgggtgtaccgcatatatacgacatcttgtatttatcttttaaaaaatat 15480105  T
Q  114 aaatagaacattgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccct 213  Q
    ||||||||||| | |||||          ||||||||||||||||||||| |||||||||||| | ||||||||||||||||||||||| ||||||||||    
T  15480104 aaatagaacatcggtcttt--aaaaaaaatatgttttgattttatcactggcctcttttcattcccagagccgagcctccgaattctcagggacggccct 15480007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 125; E-Value: 1e-63
Query Start/End: Original strand, 14 - 214
Target Start/End: Complemental strand, 38869478 - 38869279
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||| ||||| ||||||||||||||| |||||| |||||||||||||||||||||    
T  38869478 tttggtgttaggtgggggtttctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacgacaccttatatttatcttttaaaaaatat 38869379  T
Q  114 aaatagaacattgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccct 213  Q
    ||||||||||||||||||||         || ||||||||||||| ||||||||||||||||| | ||||||||||||||||||||| | ||||||||||    
T  38869378 aaatagaacattgctcttttaaaaaaaa-tacgttttgattttataactgacctcttttcattcccagagccgagcctccgaattcttagggacggccct 38869280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 122; E-Value: 6e-62
Query Start/End: Original strand, 14 - 211
Target Start/End: Original strand, 30854314 - 30854511
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||    
T  30854314 tttggtgttaggtgggggttcctcatgtatacgatagtcattttcacctctgagtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatat 30854413  T
Q  114 aaatagaacattgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggcc 211  Q
    ||||||||||||||||||||         || ||||| |||||||| ||||||| |||||||| | |||||||||||||| |||| ||| ||||||||    
T  30854414 aaatagaacattgctcttttaaaaaaaaatacgttttaattttatcgctgaccttttttcattcccagagccgagcctccaaattatcagggacggcc 30854511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 121; E-Value: 2e-61
Query Start/End: Original strand, 14 - 214
Target Start/End: Complemental strand, 16592189 - 16591990
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||| |||| ||||||||||||||| |||||||    
T  16592189 tttggtgttaggtgggggttcctcatatatacggtagtcattttcacctctgggtgtaccgcatatatacgacaccctgtatttatcttttagaaaatat 16592090  T
Q  114 aaatagaacattgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccct 213  Q
    ||||||||||||||||||||         |||||||||||||||||| || ||||||||||||   |||||||||||||| |||||||| ||||||||||    
T  16592089 aaatagaacattgctcttttaaaaaaaa-tatgttttgattttatcattggcctcttttcattctcagagccgagcctccaaattctcaaggacggccct 16591991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 121; E-Value: 2e-61
Query Start/End: Original strand, 14 - 210
Target Start/End: Original strand, 19523184 - 19523380
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  19523184 tttggtgttaggtgggggttcctcatgtatatggtagtcattttcacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatat 19523283  T
Q  114 aaatagaacattgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggc 210  Q
    ||||||||||  |||||||           | ||||||||||||||||||  ||||||||||| | ||||||||||||||||||||||| |||||||    
T  19523284 aaatagaacaccgctctttaaaaaaaaaacacgttttgattttatcactggtctcttttcattcccagagccgagcctccgaattctcagggacggc 19523380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 120; E-Value: 9e-61
Query Start/End: Original strand, 14 - 209
Target Start/End: Original strand, 2274875 - 2275070
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||| |||||||||||  |||||||||||||||||||||||||||    
T  2274875 tttggtgttaggtgggggttcctcgtgtatacggtagtcattttcacctctgggtgtactgcatatatacgataccttgtatttatcttttaaaaaatat 2274974  T
Q  114 aaatagaacattgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacgg 209  Q
    ||||||||||| ||||||||         || |||||||||||||||||| |||||||||||| | ||| ||||||||||||||||||| ||||||    
T  2274975 aaatagaacatcgctcttttaaaaaaaaatacgttttgattttatcactggcctcttttcattcccagaaccgagcctccgaattctcagggacgg 2275070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 117; E-Value: 6e-59
Query Start/End: Original strand, 14 - 214
Target Start/End: Complemental strand, 16198909 - 16198709
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| || |||||||||||| |||||| |||||||||||||||||||||    
T  16198909 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctttgggtgtatcgcatatatacgacaccttatatttatcttttaaaaaatat 16198810  T
Q  114 aaatagaacattgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccct 213  Q
    ||||||||||||||| |||          || |||||||||||||||||| |||||||||||| | ||||||||||||||||||||| | ||| ||||||    
T  16198809 aaatagaacattgctttttaaaaaaaaaatacgttttgattttatcactggcctcttttcattcccagagccgagcctccgaattcttagggaaggccct 16198710  T
Q  214 g 214  Q
    |    
T  16198709 g 16198709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 111; E-Value: 2e-55
Query Start/End: Original strand, 14 - 200
Target Start/End: Original strand, 9364276 - 9364462
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||| |||||||||||||||||||||    
T  9364276 tttgatgttaggtgggggttcctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaatat 9364375  T
Q  114 aaatagaacattgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattct 200  Q
    ||||||||||||||| ||           || |||||||||||||||||| |||||||||||| | ||||| |||||||||||||||    
T  9364376 aaatagaacattgcttttaaaaaaaaaaatacgttttgattttatcactggcctcttttcattcccagagctgagcctccgaattct 9364462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 109; E-Value: 3e-54
Query Start/End: Original strand, 14 - 213
Target Start/End: Complemental strand, 28822457 - 28822253
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||| ||||| |||||||||||||||||||||| |||||||||||||||||||||    
T  28822457 tttggtgttaggtgggggttcatcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaatat 28822358  T
Q  114 aaatagaacattgctctttt-----nnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacg 208  Q
    ||||||||||||||||||||              || ||||||||||||||||| ||||||||||||| | | |||||| |||||||||||| | |||||    
T  28822357 aaatagaacattgctcttttaaaaaaaaaaaaaatacgttttgattttatcactaacctcttttcattcccaaagccgaacctccgaattcttagggacg 28822258  T
Q  209 gccct 213  Q
    |||||    
T  28822257 gccct 28822253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 109; E-Value: 3e-54
Query Start/End: Original strand, 34 - 214
Target Start/End: Complemental strand, 31194706 - 31194528
Alignment:
Q  34 cctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctctttt 133  Q
    |||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31194706 cctcatgtatacggtagt-attttcacctctgggtttaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctctttt 31194608  T
Q  134 nnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccctg 214  Q
             || ||||||||||||||||||  ||||||||||| | ||||||||||||||||||| ||| |||||||||||    
T  31194607 aaaagaaa-tacgttttgattttatcactggtctcttttcattcccagagccgagcctccgaattttcagggacggccctg 31194528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 107; E-Value: 5e-53
Query Start/End: Original strand, 14 - 214
Target Start/End: Complemental strand, 16799442 - 16799240
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    |||||||||| ||||||||||||||||||||||||| |||||||||||| ||||| |||||||||||||||||||||| ||||||| |||||||||||||    
T  16799442 tttggtgttatgtgggggttcctcatgtatacggtaatcattttcacctttgggtgtaccgcatatatacggcaccttatatttattttttaaaaaatat 16799343  T
Q  114 aaatagaaca-ttgctctttt-nnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggcc 211  Q
    |||||||||| || |||||||          || |||||||||||||||||||| |||||||||| | ||||||||||||||||||||| | ||||||||    
T  16799342 aaatagaacatttactcttttaaaaaaaaaatacgttttgattttatcactgacatcttttcattcccagagccgagcctccgaattcttagggacggcc 16799243  T
Q  212 ctg 214  Q
    |||    
T  16799242 ctg 16799240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 106; E-Value: 2e-52
Query Start/End: Original strand, 29 - 214
Target Start/End: Complemental strand, 22986658 - 22986473
Alignment:
Q  29 gggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgct 128  Q
    ||||| |||||||||||||||||||||||||||| ||||| ||||||||||||||| ||| |||||||| ||||||||||||||| ||||||||||||||    
T  22986658 gggtttctcatgtatacggtagtcattttcacctatgggtgtaccgcatatatacgacactttgtatttgtcttttaaaaaatattaatagaacattgct 22986559  T
Q  129 cttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccctg 214  Q
    |||||        ||| |||||||||||||||||| ||||||||||||   ||||| ||||||||||||||||| |||||||||||    
T  22986558 cttttaaaaaaaattacgttttgattttatcactggcctcttttcattctcagagctgagcctccgaattctcacggacggccctg 22986473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 91; E-Value: 2e-43
Query Start/End: Original strand, 14 - 200
Target Start/End: Original strand, 27924067 - 27924253
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    |||||||||||| ||| ||||||||||||||||||||||||||| |||| ||| | |||||||||||||||||||||| |||||||||||||||||||||    
T  27924067 tttggtgttaggcgggcgttcctcatgtatacggtagtcatttttacctttggatgtaccgcatatatacggcaccttatatttatcttttaaaaaatat 27924166  T
Q  114 aaatagaacattgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattct 200  Q
    ||||||  ||||||| ||||         || |||||||||||||||||| ||||||||||||   |||| |||||| |||||||||    
T  27924167 aaataggtcattgcttttttttaaaaaaatacgttttgattttatcactggcctcttttcattctcagagtcgagcccccgaattct 27924253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 90; E-Value: 7e-43
Query Start/End: Original strand, 14 - 215
Target Start/End: Original strand, 7670909 - 7671119
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatctttt-aaaaaata 112  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||||| ||||| ||||| | |||||||||||||| |||||||||||| ||||||||    
T  7670909 tttggtgttaggtggggatacctcatgtatacggtagtcattttcacctttgggtgtaccgtaaatatacggcaccttatatttatcttttaaaaaaata 7671008  T
Q  113 taaatagaacattgctctttt--------nnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatg 204  Q
    |||||||||||||||| ||||                 || |||||||||||||||||| |||||||||||| | ||||||||||||||||||||| | |    
T  7671009 taaatagaacattgctttttttttttaaaaaaaaaaaatacgttttgattttatcactggcctcttttcattcccagagccgagcctccgaattcttaag 7671108  T
Q  205 gacggccctgt 215  Q
    |||||||||||    
T  7671109 gacggccctgt 7671119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 83; E-Value: 1e-38
Query Start/End: Original strand, 18 - 128
Target Start/End: Complemental strand, 40389647 - 40389537
Alignment:
Q  18 gtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaat 117  Q
    ||||||||||||||||||||||  ||||||||||||||||||||| ||| | ||||||||||||||| |||||| |||||||||||||||||||||||||    
T  40389647 gtgttaggtgggggttcctcataaatacggtagtcattttcacctttggatgtaccgcatatatacgacaccttatatttatcttttaaaaaatataaat 40389548  T
Q  118 agaacattgct 128  Q
    |||||||||||    
T  40389547 agaacattgct 40389537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 79; E-Value: 3e-36
Query Start/End: Original strand, 27 - 133
Target Start/End: Complemental strand, 23284164 - 23284058
Alignment:
Q  27 gggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattg 126  Q
    ||||||||||||||||||||||||||||||||| || ||||| ||||||||||||||| |||||||||||||   |||||||||||||||||||||||||    
T  23284164 gggggttcctcatgtatacggtagtcattttcatctttgggtgtaccgcatatatacgacaccttgtatttagtctttaaaaaatataaatagaacattg 23284065  T
Q  127 ctctttt 133  Q
    |||||||    
T  23284064 ctctttt 23284058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 78; E-Value: 1e-35
Query Start/End: Original strand, 34 - 214
Target Start/End: Complemental strand, 31881528 - 31881348
Alignment:
Q  34 cctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctctttt 133  Q
    |||||||||||||||||| ||||||| |||||| | | |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  31881528 cctcatgtatacggtagt-attttcatctctggatgttccgcatatatacggcaccgtgtatttatcttttaaaaaatataaatagaacattgctctttt 31881430  T
Q  134 -nnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccctg 214  Q
               | ||||||||||||| ||||||| ||||||||| | |||||||||||||  |||| ||| |||||||||||    
T  31881429 aaaaaaaaaaaacgttttgattttattactgaccacttttcattcccagagccgagcctctaaattttcagggacggccctg 31881348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 74; E-Value: 3e-33
Query Start/End: Original strand, 51 - 200
Target Start/End: Original strand, 7338021 - 7338170
Alignment:
Q  51 tcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctcttttnnnnnnnnttatgtttt 150  Q
    |||||||||||| | ||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||           | |||||    
T  7338021 tcattttcacctttaggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatataaatagaacattgctctttaaaaaaaaaaaacgtttt 7338120  T
Q  151 gattttatcactgacctcttttcatttcaagagccgagcctccgaattct 200  Q
    |||||||||  ||||||||||||||| | |||||||||||||| ||||||    
T  7338121 gattttatccttgacctcttttcattcctagagccgagcctccaaattct 7338170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 66; E-Value: 2e-28
Query Start/End: Original strand, 32 - 133
Target Start/End: Complemental strand, 36868973 - 36868872
Alignment:
Q  32 ttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctctt 131  Q
    |||||||||||||||||||| |||||||| | ||||| |||| |||||||||| |||||||||||||||||||||||||  |||||||||||||| ||||    
T  36868973 ttcctcatgtatacggtagtgattttcacatttgggtgtaccacatatatacgacaccttgtatttatcttttaaaaaaattaaatagaacattgttctt 36868874  T
Q  132 tt 133  Q
    ||    
T  36868873 tt 36868872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 30 - 132
Target Start/End: Complemental strand, 14318484 - 14318382
Alignment:
Q  30 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctc 129  Q
    |||||||||||||||||||||| |||||||  | ||| | || | |||||||||| |||||||||||||||||||||||||| |||||||||||||| ||    
T  14318484 ggttcctcatgtatacggtagtgattttcatttttggatgtatcacatatatacgacaccttgtatttatcttttaaaaaatttaaatagaacattgttc 14318385  T
Q  130 ttt 132  Q
    |||    
T  14318384 ttt 14318382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 57; E-Value: 4e-23
Query Start/End: Original strand, 33 - 133
Target Start/End: Complemental strand, 2024738 - 2024638
Alignment:
Q  33 tcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctcttt 132  Q
    |||||||||||| |||||| ||||||| || ||||| || | |||||||||||||| |||||||||||||| ||||||| |||||||||||||| |||||    
T  2024738 tcctcatgtatatggtagtgattttcatctttgggtgtatcacatatatacggcacattgtatttatctttaaaaaaatttaaatagaacattgttcttt 2024639  T
Q  133 t 133  Q
    |    
T  2024638 t 2024638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 30 - 125
Target Start/End: Complemental strand, 2530996 - 2530901
Alignment:
Q  30 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacatt 125  Q
    |||||||||||||||| ||||| |||||||||| ||| | ||||| ||||||||| ||| |||||||||||||||||||||  |||||||||||||    
T  2530996 ggttcctcatgtatacagtagtgattttcacctttggatgtaccgtatatatacgacacattgtatttatcttttaaaaaacttaaatagaacatt 2530901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 30 - 133
Target Start/End: Original strand, 34425904 - 34426007
Alignment:
Q  30 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctc 129  Q
    |||||||||||||||||||| | ||||| | || | ||| || | |||||||||||||||||||||||||||||||||||||  ||||||||||||| ||    
T  34425904 ggttcctcatgtatacggtaatgattttaatctttaggtgtatcacatatatacggcaccttgtatttatcttttaaaaaattgaaatagaacattgttc 34426003  T
Q  130 tttt 133  Q
    ||||    
T  34426004 tttt 34426007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 53; E-Value: 9e-21
Query Start/End: Original strand, 33 - 125
Target Start/End: Complemental strand, 26719045 - 26718953
Alignment:
Q  33 tcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacatt 125  Q
    ||||||||||| ||||||| |||||||||| || || || |||||||||||| ||| |||||||||||||||||||| | |||||||||||||    
T  26719045 tcctcatgtatgcggtagtgattttcacctttgagtgtatcgcatatatacgacactttgtatttatcttttaaaaattttaaatagaacatt 26718953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 53; E-Value: 9e-21
Query Start/End: Original strand, 33 - 125
Target Start/End: Complemental strand, 26988789 - 26988697
Alignment:
Q  33 tcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacatt 125  Q
    ||||||||||| ||||||| |||||||||| || || || |||||||||||| ||| |||||||||||||||||||| | |||||||||||||    
T  26988789 tcctcatgtatgcggtagtgattttcacctttgagtgtatcgcatatatacgacactttgtatttatcttttaaaaattttaaatagaacatt 26988697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 52; E-Value: 4e-20
Query Start/End: Original strand, 30 - 133
Target Start/End: Complemental strand, 1366625 - 1366522
Alignment:
Q  30 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctc 129  Q
    |||||||||| ||||||||||| |||||||| | | ||| || |||||||||||  || |||||||||||||| |||||||| |||||||||||||| ||    
T  1366625 ggttcctcatatatacggtagtgattttcacatttaggtgtatcgcatatataccacatcttgtatttatcttataaaaaatttaaatagaacattgttc 1366526  T
Q  130 tttt 133  Q
    ||||    
T  1366525 tttt 1366522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 52; E-Value: 4e-20
Query Start/End: Original strand, 30 - 133
Target Start/End: Original strand, 33037781 - 33037884
Alignment:
Q  30 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctc 129  Q
    |||||||||||||||||||| |  ||||||||| ||||| |||  ||||||||||  | ||||||||||||||||||||||| |||||| ||||||| ||    
T  33037781 ggttcctcatgtatacggtaatggttttcacctttgggtgtacaacatatatacgatatcttgtatttatcttttaaaaaatttaaataaaacattgttc 33037880  T
Q  130 tttt 133  Q
    ||||    
T  33037881 tttt 33037884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 30 - 132
Target Start/End: Original strand, 2412089 - 2412191
Alignment:
Q  30 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctc 129  Q
    |||||||||||||||| ||||| |||||||| | ||| |  | |||||||||||| ||| |||||||||| ||||||||||| |||||||||||||| ||    
T  2412089 ggttcctcatgtatacagtagtgattttcacatttggatgcatcgcatatatacgacactttgtatttattttttaaaaaatttaaatagaacattgttc 2412188  T
Q  130 ttt 132  Q
    |||    
T  2412189 ttt 2412191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 31 - 125
Target Start/End: Original strand, 24395741 - 24395835
Alignment:
Q  31 gttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacatt 125  Q
    ||||||||| |||||||| || |||||||||| ||| | ||  | ||||||||  |||||||||||||||||||||||||| |||||||||||||    
T  24395741 gttcctcatctatacggtggtgattttcacctttggatgtattgtatatatacaacaccttgtatttatcttttaaaaaatttaaatagaacatt 24395835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 32 - 133
Target Start/End: Original strand, 10407464 - 10407565
Alignment:
Q  32 ttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctctt 131  Q
    ||||||||| |||||||||| |||||||| | | | | |||  ||||| |||| |||||||| ||||||||||||||||| |||||||||||||| ||||    
T  10407464 ttcctcatgcatacggtagtaattttcacttttagatgtacaacatatgtacgacaccttgtgtttatcttttaaaaaatttaaatagaacattgttctt 10407563  T
Q  132 tt 133  Q
    ||    
T  10407564 tt 10407565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 1125 - 1212
Target Start/End: Original strand, 3939701 - 3939788
Alignment:
Q  1125 tttcctctcaactaagaacatgctcgcttatagattacaaaggcatgaagtgtgagcttcagtttgcagagtatgttttgaagaatgc 1212  Q
    |||| |||||| |||| |||||||||||||||| ||| |||||||  || |||||||||| |||||| |||||| |||||||||||||    
T  3939701 tttcttctcaattaaggacatgctcgcttataggttataaaggcagcaactgtgagcttctgtttgctgagtatattttgaagaatgc 3939788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 38 - 125
Target Start/End: Original strand, 10543682 - 10543769
Alignment:
Q  38 atgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacatt 125  Q
    |||||||||||||| |||||||||| ||| | || |||||||||||  |||||| ||||||||||||||||||| ||| | |||||||    
T  10543682 atgtatacggtagtgattttcacctttggatgtatcgcatatatacatcaccttatatttatcttttaaaaaatttaagtggaacatt 10543769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 30 - 133
Target Start/End: Complemental strand, 11242417 - 11242314
Alignment:
Q  30 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctc 129  Q
    |||||||||||||||||||||| |||| || || ||| | || | |||||||||  ||  |||||||||||||||||||||  |||||||||||||| ||    
T  11242417 ggttcctcatgtatacggtagtgatttccatctttggttgtatcacatatatacatcattttgtatttatcttttaaaaaaattaaatagaacattgttc 11242318  T
Q  130 tttt 133  Q
    ||||    
T  11242317 tttt 11242314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 30 - 133
Target Start/End: Complemental strand, 40794426 - 40794323
Alignment:
Q  30 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctc 129  Q
    |||| ||||||||||||||||| |||||||||| | ||| || |  |||| |||||| | |||||||| ||||||||||||| |||||| ||||||| ||    
T  40794426 ggtttctcatgtatacggtagtgattttcaccttttggtgtatcatatatttacggctctttgtatttgtcttttaaaaaatttaaataaaacattgttc 40794327  T
Q  130 tttt 133  Q
    ||||    
T  40794326 tttt 40794323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 43; E-Value: 0.000000000000008
Query Start/End: Original strand, 41 - 131
Target Start/End: Complemental strand, 22648824 - 22648734
Alignment:
Q  41 tatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctctt 131  Q
    ||||| ||||| ||| |||||| ||| | | || |||||||||| ||| |||||||||||||||||||||| |||||||||||||| ||||    
T  22648824 tatacagtagtgattgtcacctttggatgtgccacatatatacgacacattgtatttatcttttaaaaaatttaaatagaacattgttctt 22648734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 43; E-Value: 0.000000000000008
Query Start/End: Original strand, 30 - 132
Target Start/End: Complemental strand, 41911716 - 41911614
Alignment:
Q  30 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctc 129  Q
    |||||||||| |||||| |||| ||||| || | ||||| |||||| |||||||| |||||||||||| ||||||||||||  ||| | |||||||| ||    
T  41911716 ggttcctcatatatacgatagtgatttttacttttgggtgtaccgcttatatacgacaccttgtatttctcttttaaaaaaattaagttgaacattgttc 41911617  T
Q  130 ttt 132  Q
    |||    
T  41911616 ttt 41911614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 86 - 133
Target Start/End: Original strand, 606211 - 606258
Alignment:
Q  86 caccttgtatttatcttttaaaaaatataaatagaacattgctctttt 133  Q
    |||||||||||||||||||||||||| |||||||||||||| ||||||    
T  606211 caccttgtatttatcttttaaaaaatttaaatagaacattgttctttt 606258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 149 - 200
Target Start/End: Complemental strand, 40389518 - 40389467
Alignment:
Q  149 ttgattttatcactgacctcttttcatttcaagagccgagcctccgaattct 200  Q
    ||||||||||||||||| |||||||||| | |||||||||||||||||||||    
T  40389518 ttgattttatcactgacatcttttcattcccagagccgagcctccgaattct 40389467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 30 - 110
Target Start/End: Original strand, 15639644 - 15639724
Alignment:
Q  30 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaa 110  Q
    ||||||| |||||||||  ||| ||||||| || ||| | || |||||||||||| |||||||||||||||||| ||||||    
T  15639644 ggttccttatgtatacgacagtgattttcatctttggatgtatcgcatatatacgtcaccttgtatttatctttaaaaaaa 15639724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 146 - 214
Target Start/End: Complemental strand, 23284011 - 23283943
Alignment:
Q  146 gttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccctg 214  Q
    |||||||||||||||||| |||||||||||| | | | | ||||||| ||||||||| |||||||||||    
T  23284011 gttttgattttatcactggcctcttttcattcctaaaactgagcctctgaattctcagggacggccctg 23283943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 292 - 364
Target Start/End: Original strand, 3938851 - 3938923
Alignment:
Q  292 gatgtgatccacatgatatcaatcgatttgttcctgttgctgtcaaaaaaggaattgagaatctcatcttaga 364  Q
    ||||||||||| ||||||||||||||||  || |||||||||| |||  ||||||||| ||||| | ||||||    
T  3938851 gatgtgatccatatgatatcaatcgattcatttctgttgctgtaaaacgaggaattgataatcttaccttaga 3938923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 42 - 126
Target Start/End: Original strand, 17344969 - 17345053
Alignment:
Q  42 atacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattg 126  Q
    |||||||||| ||||| | || ||||| ||||||||||| | | || |||||||||||  | |||||||| ||||||||||||||    
T  17344969 atacggtagtaatttttatctttgggtgtaccgcatatacatgacatcttgtatttattatataaaaaatttaaatagaacattg 17345053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 89 - 133
Target Start/End: Original strand, 27530543 - 27530587
Alignment:
Q  89 cttgtatttatcttttaaaaaatataaatagaacattgctctttt 133  Q
    |||||||| |||||||||||||| |||||||||||||| ||||||    
T  27530543 cttgtattaatcttttaaaaaatttaaatagaacattgttctttt 27530587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 144; Significance: 4e-75; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 144; E-Value: 4e-75
Query Start/End: Original strand, 14 - 214
Target Start/End: Complemental strand, 2952339 - 2952137
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||| ||||||||||||||||||||||||    
T  2952339 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcatctctgggtgtaccgcatatatacggcactttgtatttatcttttaaaaaatat 2952240  T
Q  114 aaatagaacattgctctttt--nnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggcc 211  Q
    ||||||||||||||||||||          |||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||| ||||||||    
T  2952239 aaatagaacattgctctttttaaaaaaaaattatgttttgattttatcactggcctcttttcatttccagagccgagcctccgaattctcagggacggcc 2952140  T
Q  212 ctg 214  Q
    |||    
T  2952139 ctg 2952137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 143; E-Value: 2e-74
Query Start/End: Original strand, 14 - 211
Target Start/End: Original strand, 30883314 - 30883512
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||    
T  30883314 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacggcacattgtatttatcttttaaaaaatat 30883413  T
Q  114 aaatagaacattgctctttt-nnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggcc 211  Q
    ||||||||||||||||||||         |||||||||||||||||||||| |||||||||||||| ||||||||||||| ||||||||| ||||||||    
T  30883414 aaatagaacattgctcttttaaaaaaaaattatgttttgattttatcactggcctcttttcatttccagagccgagcctctgaattctcagggacggcc 30883512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 133; E-Value: 2e-68
Query Start/End: Original strand, 14 - 214
Target Start/End: Complemental strand, 3048635 - 3048435
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    |||||||||||||| ||||||||| ||||||||||||||||||||| |||| ||| ||||||||||||||||||||||||||||||||||||||||||||    
T  3048635 tttggtgttaggtgagggttcctcgtgtatacggtagtcattttcatctctaggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatat 3048536  T
Q  114 aaatagaacattgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccct 213  Q
    |||||| | |||||||||||        |||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||  |||||||||    
T  3048535 aaatagtatattgctcttttaaaaaaaattatgttttgattttatcactggcctcttttcatttccagagccgagcctccgaattctcagagacggccct 3048436  T
Q  214 g 214  Q
    |    
T  3048435 g 3048435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 133; E-Value: 2e-68
Query Start/End: Original strand, 14 - 214
Target Start/End: Original strand, 45475802 - 45476001
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  45475802 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctatgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatat 45475901  T
Q  114 aaatagaacattgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccct 213  Q
    ||||||||||||||||||||         || |||||||||||||||||| |||||||||||| |  |||||||||||||||||||||| ||| ||||||    
T  45475902 aaatagaacattgctcttttaaaaaaaa-tacgttttgattttatcactggcctcttttcattccccgagccgagcctccgaattctcagggatggccct 45476000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 130; E-Value: 1e-66
Query Start/End: Original strand, 14 - 211
Target Start/End: Complemental strand, 13534804 - 13534609
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||    
T  13534804 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacggca-cttgtatttatcttttaaaaaatat 13534706  T
Q  114 aaatagaacattgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggcc 211  Q
    ||||||||||||||||||||         || |||||||||||||||||| |||||||||||| | ||||||||||||||||||| ||| ||||||||    
T  13534705 aaatagaacattgctcttttaaaaaaaa-tacgttttgattttatcactggcctcttttcattcccagagccgagcctccgaattttcagggacggcc 13534609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 130; E-Value: 1e-66
Query Start/End: Original strand, 14 - 211
Target Start/End: Complemental strand, 13624344 - 13624149
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||    
T  13624344 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacggca-cttgtatttatcttttaaaaaatat 13624246  T
Q  114 aaatagaacattgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggcc 211  Q
    ||||||||||||||||||||         || |||||||||||||||||| |||||||||||| | ||||||||||||||||||| ||| ||||||||    
T  13624245 aaatagaacattgctcttttaaaaaaaa-tacgttttgattttatcactggcctcttttcattcccagagccgagcctccgaattttcagggacggcc 13624149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 125; E-Value: 1e-63
Query Start/End: Original strand, 14 - 214
Target Start/End: Complemental strand, 23606747 - 23606548
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||| ||||| |||||||||||||||||||||| |||||||||||||||||||||    
T  23606747 tttggtgttaggtgggggttcctcatgtatacggtagtcatttttacctttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaatat 23606648  T
Q  114 aaatagaacattgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccct 213  Q
    ||||||||||||||||||||         || ||||||||||||||||||  ||||||||||| | ||||||||||||||||||||| | ||||||||||    
T  23606647 aaatagaacattgctcttttaaaaaaaa-tacgttttgattttatcactggtctcttttcattcccagagccgagcctccgaattcttagggacggccct 23606549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 125; E-Value: 1e-63
Query Start/End: Original strand, 14 - 214
Target Start/End: Complemental strand, 23798379 - 23798179
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| | ||||| |||||||||||||||||||||| |||||||||||||||||||||    
T  23798379 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacttttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaatat 23798280  T
Q  114 aaatagaacattgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccct 213  Q
    |||||||||||||||||||          || ||||||||||||||| |||||||||||| || | ||||||||||||||||||||| | ||||||||||    
T  23798279 aaatagaacattgctctttaaaaaaaatatacgttttgattttatcattgacctcttttcgttcccagagccgagcctccgaattcttagggacggccct 23798180  T
Q  214 g 214  Q
    |    
T  23798179 g 23798179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 125; E-Value: 1e-63
Query Start/End: Original strand, 14 - 214
Target Start/End: Original strand, 42600767 - 42600967
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||| ||||||||||||||||| |||||||||||||||||||||    
T  42600767 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctttgggtgtaccacatatatacggcaccttatatttatcttttaaaaaatat 42600866  T
Q  114 aaatagaacattgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccct 213  Q
    ||||||| ||||||| ||||          | ||||||||||||||||||||||||||||||||  ||||||||||||||||||||| | ||||||||||    
T  42600867 aaatagatcattgcttttttaaaaaaaaaaacgttttgattttatcactgacctcttttcattttcagagccgagcctccgaattcttagggacggccct 42600966  T
Q  214 g 214  Q
    |    
T  42600967 g 42600967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 124; E-Value: 4e-63
Query Start/End: Original strand, 14 - 202
Target Start/End: Complemental strand, 5860862 - 5860672
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    ||||||||||||| |||||| |||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  5860862 tttggtgttaggttggggtttctcatgtatatggtagtcattttcacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatat 5860763  T
Q  114 aaatagaacattgctcttt--tnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctca 202  Q
    |||||||||||||||||||           ||||||||||||||||||| ||||||||||||||||| |||||||||||||| ||||||||    
T  5860762 aaatagaacattgctctttaaaaataaatattatgttttgattttatcattgacctcttttcatttccagagccgagcctccaaattctca 5860672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 121; E-Value: 2e-61
Query Start/End: Original strand, 14 - 214
Target Start/End: Complemental strand, 37430276 - 37430076
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    |||||||||| ||| ||||||||||||||||||||||||||||| |||||| ||| || |||||||||||||||||||||||||||||||||||||||||    
T  37430276 tttggtgttacgtgagggttcctcatgtatacggtagtcatttttacctctaggtgtaacgcatatatacggcaccttgtatttatcttttaaaaaatat 37430177  T
Q  114 aaatagaacattgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccct 213  Q
    ||||||||||| ||||||||          | |||||||||||||||||| |||||||||||| | ||||||||||||||||||||||| ||||||||||    
T  37430176 aaatagaacatcgctcttttaaaaaaaaaaacgttttgattttatcactggcctcttttcattcccagagccgagcctccgaattctcagggacggccct 37430077  T
Q  214 g 214  Q
    |    
T  37430076 g 37430076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 113; E-Value: 1e-56
Query Start/End: Original strand, 14 - 214
Target Start/End: Original strand, 41879166 - 41879364
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    |||||||||||||||||||| ||||||||| |||||||||||||||||| ||| | |||||||||||||||| |||||||||||||||||||||||||||    
T  41879166 tttggtgttaggtgggggtttctcatgtattcggtagtcattttcacctttggatgtaccgcatatatacggtaccttgtatttatcttttaaaaaatat 41879265  T
Q  114 aaatagaacattgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccct 213  Q
    ||||||||||||| ||||||         || ||||| ||||||||||| ||||||||||||| | |||||||||||| |||||||||| ||||||||||    
T  41879266 aaatagaacattgttcttttaaaaaaa--tacgttttaattttatcactaacctcttttcattcccagagccgagccttcgaattctcagggacggccct 41879363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 110; E-Value: 9e-55
Query Start/End: Original strand, 14 - 215
Target Start/End: Original strand, 10917376 - 10917576
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| |||||||||||||||||||||| |||||||||||||||||||||    
T  10917376 tttggtgttaggtgggggttcctcatgtataaggtagtcattttcacctttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaatat 10917475  T
Q  114 aaatagaacattgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccct 213  Q
    ||||||| ||||| | ||||         || |||||||||||||||||| ||||||||||||   ||||||||||||||||||||| | |||| |||||    
T  10917476 aaatagatcattg-ttttttttaaaaaaatacgttttgattttatcactggcctcttttcattctcagagccgagcctccgaattcttaaggacagccct 10917574  T
Q  214 gt 215  Q
    ||    
T  10917575 gt 10917576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 68; E-Value: 1e-29
Query Start/End: Original strand, 30 - 133
Target Start/End: Complemental strand, 7944624 - 7944521
Alignment:
Q  30 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctc 129  Q
    |||||||||||||||||||||| |||||||||| ||||| |||  ||||||||||||||||||||||||| ||||||||||| |||||| ||||||| ||    
T  7944624 ggttcctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacggcaccttgtatttattttttaaaaaatttaaataaaacattgttc 7944525  T
Q  130 tttt 133  Q
    ||||    
T  7944524 tttt 7944521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 30 - 125
Target Start/End: Original strand, 8102913 - 8103008
Alignment:
Q  30 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacatt 125  Q
    |||||||||||||||||||| | |||||||||| | ||| |||||||||||||| ||||||||||||||||||||||||||| |||||| ||||||    
T  8102913 ggttcctcatgtatacggtaatgattttcacctttaggtgtaccgcatatatactgcaccttgtatttatcttttaaaaaatttaaatataacatt 8103008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 60; E-Value: 6e-25
Query Start/End: Original strand, 30 - 133
Target Start/End: Complemental strand, 5973209 - 5973106
Alignment:
Q  30 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctc 129  Q
    |||||||| ||||||||||| | ||||||| || ||||| |||  |||||||||| |||||||||||||||||||||||||| |||||||||||||| ||    
T  5973209 ggttcctcgtgtatacggtaatgattttcatctatgggtgtacaacatatatacgacaccttgtatttatcttttaaaaaatttaaatagaacattgttc 5973110  T
Q  130 tttt 133  Q
    ||||    
T  5973109 tttt 5973106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 60; E-Value: 6e-25
Query Start/End: Original strand, 30 - 133
Target Start/End: Original strand, 11290185 - 11290288
Alignment:
Q  30 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctc 129  Q
    |||| ||||||||||||||||| |||||||||| || || |||  |||||||||| |||||||||||||||||||||||||| |||||| ||||||| ||    
T  11290185 ggttgctcatgtatacggtagtgattttcacctttgagtgtacaacatatatacgacaccttgtatttatcttttaaaaaatttaaataaaacattgttc 11290284  T
Q  130 tttt 133  Q
    ||||    
T  11290285 tttt 11290288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 30 - 132
Target Start/End: Complemental strand, 39332507 - 39332405
Alignment:
Q  30 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctc 129  Q
    |||||||||||||||||||||| |||||||||| ||| | |||||| |||||| | ||||||||||||||||||| |||||  |||||||||||||| ||    
T  39332507 ggttcctcatgtatacggtagtgattttcacctttggatgtaccgcttatatatgacaccttgtatttatctttttaaaaaattaaatagaacattgttc 39332408  T
Q  130 ttt 132  Q
    |||    
T  39332407 ttt 39332405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 57; E-Value: 4e-23
Query Start/End: Original strand, 30 - 110
Target Start/End: Original strand, 5942697 - 5942777
Alignment:
Q  30 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaa 110  Q
    |||||||||||||||||||||| |||||||||| ||||| ||||||| ||||||| || ||||||||||||||||||||||    
T  5942697 ggttcctcatgtatacggtagtgattttcacctttgggtgtaccgcacatatacgacatcttgtatttatcttttaaaaaa 5942777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 30 - 133
Target Start/End: Complemental strand, 15167517 - 15167414
Alignment:
Q  30 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctc 129  Q
    ||||||||||||||||| |||| |||||||| | ||||| || |||||||||||  ||| || ||||||||||||||||||| |||||||||||||| ||    
T  15167517 ggttcctcatgtatacgatagtgattttcacatttgggtgtatcgcatatatacaacactttatatttatcttttaaaaaatttaaatagaacattgttc 15167418  T
Q  130 tttt 133  Q
    ||||    
T  15167417 tttt 15167414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 55; E-Value: 6e-22
Query Start/End: Original strand, 30 - 124
Target Start/End: Original strand, 5721560 - 5721654
Alignment:
Q  30 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacat 124  Q
    ||||||||| |||||||||||| |||||||| | ||||| |||||  |||||| |||||||||||||||||||||||||||  ||||||||||||    
T  5721560 ggttcctcaggtatacggtagtgattttcacttttgggtgtaccgattatatagggcaccttgtatttatcttttaaaaaaattaaatagaacat 5721654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 53; E-Value: 9e-21
Query Start/End: Original strand, 30 - 133
Target Start/End: Complemental strand, 41677276 - 41677172
Alignment:
Q  30 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaa-aaaatataaatagaacattgct 128  Q
    |||||||||||||||| ||||| |||||||||| | | | || |||||||||||| || |||||||||||||||||| ||||| |||||||||||||| |    
T  41677276 ggttcctcatgtatacagtagtgattttcacctttagatgtatcgcatatatacgacatcttgtatttatcttttaaaaaaatttaaatagaacattgtt 41677177  T
Q  129 ctttt 133  Q
    |||||    
T  41677176 ctttt 41677172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 52; E-Value: 4e-20
Query Start/End: Original strand, 30 - 125
Target Start/End: Original strand, 15078759 - 15078854
Alignment:
Q  30 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacatt 125  Q
    ||||||||||||||||| |||| |||||||| | ||||| ||  |||||||||| ||||||| ||||||||||||||||| | |||||||||||||    
T  15078759 ggttcctcatgtatacgatagtgattttcacatttgggtgtatagcatatatacagcaccttatatttatcttttaaaaattttaaatagaacatt 15078854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 52; E-Value: 4e-20
Query Start/End: Original strand, 30 - 125
Target Start/End: Complemental strand, 25561595 - 25561502
Alignment:
Q  30 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacatt 125  Q
    |||||||||||||||||| ||| |||||||| | ||||| || |||||||||||||||||||||||||||| ||||||| || |||||||||||||    
T  25561595 ggttcctcatgtatacggcagtgattttcacatttgggt-tatcgcatatatacggcaccttgtatttatc-tttaaaagatttaaatagaacatt 25561502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 35 - 133
Target Start/End: Complemental strand, 34789959 - 34789861
Alignment:
Q  35 ctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctctttt 133  Q
    ||||||||||||||||| |||||||||| ||||| |||  |||||||||| || |||||||||||||||||| | || |||||||||||| | ||||||    
T  34789959 ctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacgacatcttgtatttatcttttaagagatttaaatagaacatcgttctttt 34789861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 48; E-Value: 9e-18
Query Start/End: Original strand, 38 - 133
Target Start/End: Original strand, 8646215 - 8646309
Alignment:
Q  38 atgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctctttt 133  Q
    |||||||||||||| |||||||| | || || ||  |||||||||||  ||||||||||||||||||||||||| |||||||||||||| ||||||    
T  8646215 atgtatacggtagtgattttcacatttgcgtgtat-gcatatatacgataccttgtatttatcttttaaaaaatttaaatagaacattgttctttt 8646309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 146 - 214
Target Start/End: Complemental strand, 20003796 - 20003728
Alignment:
Q  146 gttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccctg 214  Q
    |||||||||||||||||| |||||||||||| |  ||||||||||||| |||||||| |||||||||||    
T  20003796 gttttgattttatcactggcctcttttcattccccgagccgagcctccaaattctcagggacggccctg 20003728  T

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Target: chr8; HSP #28
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 53 - 132
Target Start/End: Complemental strand, 30674482 - 30674403
Alignment:
Q  53 attttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctcttt 132  Q
    |||||||||| || || || |||||||||||| |||||| |||||||||||||||| || |||||||||||||| |||||    
T  30674482 attttcacctttgagtgtatcgcatatatacgacaccttatatttatcttttaaaacatttaaatagaacattgttcttt 30674403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 30 - 132
Target Start/End: Complemental strand, 14510084 - 14509983
Alignment:
Q  30 ggttcctcatgtatacggtagtcatttt-cacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgct 128  Q
    |||| ||||||||||||||||| ||||| ||| | ||||| |||||  |||||||| |||||| ||||| ||||||||||||| ||||| |||||||| |    
T  14510084 ggttactcatgtatacggtagtgatttttcacatttgggtgtaccg--tatatacgacaccttatatttgtcttttaaaaaatttaaattgaacattgtt 14509987  T
Q  129 cttt 132  Q
    ||||    
T  14509986 cttt 14509983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 38; E-Value: 0.000000000008
Query Start/End: Original strand, 87 - 132
Target Start/End: Original strand, 9108551 - 9108596
Alignment:
Q  87 accttgtatttatcttttaaaaaatataaatagaacattgctcttt 132  Q
    ||||||||||||||||||||||||| |||||||||||||| |||||    
T  9108551 accttgtatttatcttttaaaaaatttaaatagaacattgttcttt 9108596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 38; E-Value: 0.000000000008
Query Start/End: Original strand, 53 - 126
Target Start/End: Complemental strand, 23941170 - 23941097
Alignment:
Q  53 attttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattg 126  Q
    ||||||| || ||||| || ||| |||||| | |||||||||||||||||||||||||| |||||| |||||||    
T  23941170 attttcatctttgggtgtatcgcttatatatgacaccttgtatttatcttttaaaaaatttaaataaaacattg 23941097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 86 - 125
Target Start/End: Complemental strand, 34868223 - 34868184
Alignment:
Q  86 caccttgtatttatcttttaaaaaatataaatagaacatt 125  Q
    |||||||||||||||||||||||||| |||||||||||||    
T  34868223 caccttgtatttatcttttaaaaaatttaaatagaacatt 34868184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 33 - 132
Target Start/End: Complemental strand, 34048806 - 34048705
Alignment:
Q  33 tcctcatgtatacggtagtcattttcacctctgggtatacc--gcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctct 130  Q
    ||||||||||||| ||||| ||||||| || ||||| || |    ||||||||| ||| |||||||||||||||||||  | |||||||||||||| |||    
T  34048806 tcctcatgtatacagtagtgattttcatctttgggtgtatcatatatatatacgacacattgtatttatcttttaaaatgtttaaatagaacattgttct 34048707  T
Q  131 tt 132  Q
    ||    
T  34048706 tt 34048705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 72 - 102
Target Start/End: Original strand, 5757123 - 5757153
Alignment:
Q  72 ccgcatatatacggcaccttgtatttatctt 102  Q
    |||||||||||||||||||||||||||||||    
T  5757123 ccgcatatatacggcaccttgtatttatctt 5757153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 144; Significance: 4e-75; HSPs: 44)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 144; E-Value: 4e-75
Query Start/End: Original strand, 14 - 214
Target Start/End: Original strand, 44655737 - 44655936
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||| ||||||||||||||||||||||||||||    
T  44655737 tttggtgttaggtgggggttcctcatgtatacggtagtcatttttacctctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatat 44655836  T
Q  114 aaatagaacattgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccct 213  Q
    ||||||||||||||||||||        ||||||||||||||||||||||  ||||||||||||| ||||||||||||||||||||||| ||||||||||    
T  44655837 aaatagaacattgctctttt-aaaaaaattatgttttgattttatcactggtctcttttcatttccagagccgagcctccgaattctcagggacggccct 44655935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 141; E-Value: 3e-73
Query Start/End: Original strand, 14 - 214
Target Start/End: Original strand, 14146296 - 14146495
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  14146296 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcatctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatat 14146395  T
Q  114 aaatagaacattgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccct 213  Q
    ||||||||||| ||||||||         || |||||||||||||||||| |||||||||||| ||||||||||||||||||||||||| ||||||||||    
T  14146396 aaatagaacatcgctcttttaaaaaaaa-tacgttttgattttatcactggcctcttttcattccaagagccgagcctccgaattctcagggacggccct 14146494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 134; E-Value: 4e-69
Query Start/End: Original strand, 14 - 215
Target Start/End: Original strand, 5316676 - 5316876
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  5316676 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatat 5316775  T
Q  114 aaatagaacattgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccct 213  Q
    ||||||||||||||||||||         || ||||||||||||||||||||||||||||||| | |  | ||||||||| |||||||| ||||||||||    
T  5316776 aaatagaacattgctcttttaaaaaaaa-tacgttttgattttatcactgacctcttttcattcctaaggtcgagcctccaaattctcagggacggccct 5316874  T
Q  214 gt 215  Q
    ||    
T  5316875 gt 5316876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 129; E-Value: 4e-66
Query Start/End: Original strand, 14 - 214
Target Start/End: Original strand, 23185423 - 23185622
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  23185423 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctatgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatat 23185522  T
Q  114 aaatagaacattgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccct 213  Q
    ||||||||||||||||||||         || |||||||||||||||||| |||||||||| | |  |||||||||||||||||||||| | ||||||||    
T  23185523 aaatagaacattgctcttttaaaaaaaa-tacgttttgattttatcactggcctcttttcaatcctcgagccgagcctccgaattctcaggaacggccct 23185621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 123; E-Value: 2e-62
Query Start/End: Original strand, 14 - 215
Target Start/End: Original strand, 5027545 - 5027747
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    |||||||||||||||||||||||||| |||| ||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  5027545 tttggtgttaggtgggggttcctcatctatatggtagtcattttcacctatgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatat 5027644  T
Q  114 aaatagaacattgctctttt-nnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccc 212  Q
    ||||||||||||||||||||          || |||||||||||||||||| |||||||||||| |  ||| |||||||||||||||||| |||||||||    
T  5027645 aaatagaacattgctcttttaaaaaaaaaatacgttttgattttatcactggcctcttttcattccccgagtcgagcctccgaattctcagggacggccc 5027744  T
Q  213 tgt 215  Q
    |||    
T  5027745 tgt 5027747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 121; E-Value: 2e-61
Query Start/End: Original strand, 14 - 214
Target Start/End: Original strand, 17168952 - 17169151
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    ||||||||||||| ||||||||||||||||| ||||||||||||||||| ||||| ||||||||||||||  |||||| |||||||||||||||||||||    
T  17168952 tttggtgttaggtaggggttcctcatgtatatggtagtcattttcacctttgggtgtaccgcatatatacaacaccttatatttatcttttaaaaaatat 17169051  T
Q  114 aaatagaacattgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccct 213  Q
    ||||||||||||||| ||||         || ||||||||||||||||||||||||||||||||| ||||||||||||||||||||| | ||||||||||    
T  17169052 aaatagaacattgct-ttttttaaaaaaatacgttttgattttatcactgacctcttttcatttccagagccgagcctccgaattcttagggacggccct 17169150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 120; E-Value: 9e-61
Query Start/End: Original strand, 14 - 214
Target Start/End: Original strand, 6771787 - 6771989
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    ||||||||||||||| |||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  6771787 tttggtgttaggtggaggttcctcgtgtatacggtagtcattttcacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatat 6771886  T
Q  114 aaatagaacattgctcttt--tnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggcc 211  Q
    ||||||||||| |||||||             | |||||||||||||||||| |||||||||||| | ||||||||||||||||||||||| ||||||||    
T  6771887 aaatagaacatcgctctttaaaaaaaaaaaacacgttttgattttatcactggcctcttttcattcccagagccgagcctccgaattctcagggacggcc 6771986  T
Q  212 ctg 214  Q
    |||    
T  6771987 ctg 6771989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 118; E-Value: 1e-59
Query Start/End: Original strand, 14 - 211
Target Start/End: Original strand, 50881426 - 50881621
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    ||||||||||||||| |||||||||||||||| |||||||||||||||||| | | ||||||||||||||| ||||||||||||||||||||||||||||    
T  50881426 tttggtgttaggtggaggttcctcatgtatactgtagtcattttcacctctagatgtaccgcatatatacgacaccttgtatttatcttttaaaaaatat 50881525  T
Q  114 aaatagaacattgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggcc 211  Q
    ||||||||||||||||||||         ||  |||| |||||||||||| |||||||||||||| ||||||||||||||||||||||| ||||||||    
T  50881526 aaatagaacattgctcttttaaaaaaa--tagattttaattttatcactggcctcttttcatttccagagccgagcctccgaattctcagggacggcc 50881621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 114; E-Value: 4e-57
Query Start/End: Original strand, 14 - 215
Target Start/End: Original strand, 3406414 - 3406615
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| | || ||| ||||||||||||||||||||||||||||||||||||||||    
T  3406414 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctccgagtgtactgcatatatacggcaccttgtatttatcttttaaaaaatat 3406513  T
Q  114 aaatagaacattgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccct 213  Q
    ||||||||||| ||||||||          | ||||| ||||||||||||||||||||||||| |  |||| |||||||| |||||||| |||| |||||    
T  3406514 aaatagaacatcgctcttttaaaaaaaaaaacgttttcattttatcactgacctcttttcattccccgagctgagcctccaaattctcagggacagccct 3406613  T
Q  214 gt 215  Q
    ||    
T  3406614 gt 3406615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 114; E-Value: 4e-57
Query Start/End: Original strand, 14 - 215
Target Start/End: Complemental strand, 3440406 - 3440205
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| | || ||| ||||||||||||||||||||||||||||||||||||||||    
T  3440406 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctccgagtgtactgcatatatacggcaccttgtatttatcttttaaaaaatat 3440307  T
Q  114 aaatagaacattgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccct 213  Q
    ||||||||||| ||||||||          | ||||| ||||||||||||||||||||||||| |  |||| |||||||| |||||||| |||| |||||    
T  3440306 aaatagaacatcgctcttttaaaaaaaaaaacgttttcattttatcactgacctcttttcattccccgagctgagcctccaaattctcagggacagccct 3440207  T
Q  214 gt 215  Q
    ||    
T  3440206 gt 3440205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 113; E-Value: 1e-56
Query Start/End: Original strand, 14 - 214
Target Start/End: Complemental strand, 4971735 - 4971536
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| | ||||| |||||||||||||||| |||||||||||||||||||||||||||    
T  4971735 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacttatgggtgtaccgcatatatacggtaccttgtatttatcttttaaaaaatat 4971636  T
Q  114 aaatagaacattgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccct 213  Q
    |||||||||||||||| |||         |||||||||||||||||||||  ||||||||||| |  || ||||||||| ||||||||| |||| |||||    
T  4971635 aaatagaacattgctc-tttaaaaaaaaatatgttttgattttatcactggtctcttttcattccccgaaccgagcctcagaattctcagggacagccct 4971537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 108; E-Value: 1e-53
Query Start/End: Original strand, 14 - 214
Target Start/End: Complemental strand, 27906834 - 27906646
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||              |||||||||||||||||||||||||||||||    
T  27906834 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgg------------cggcaccttgtatttatcttttaaaaaatat 27906747  T
Q  114 aaatagaacattgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccct 213  Q
    |||| |||||||||||||||        |||||||||||||||||||||| |||||||||||||  ||||||||||||||||||||||| ||||||||||    
T  27906746 aaatggaacattgctcttttaaaaaaaattatgttttgattttatcactggcctcttttcattttcagagccgagcctccgaattctcagggacggccct 27906647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 107; E-Value: 5e-53
Query Start/End: Original strand, 18 - 208
Target Start/End: Original strand, 16140055 - 16140244
Alignment:
Q  18 gtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaat 117  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||| ||| ||||||||||||||  ||||||||||||||||||||||||||||||||    
T  16140055 gtgttaggtggggattcctcatgtatacggtagtcattttcacctctaggtgtaccgcatatatacaacaccttgtatttatcttttaaaaaatataaat 16140154  T
Q  118 agaacattgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacg 208  Q
    |||||||  |||||||         || |||||||||||||||| | |||||||||||| | ||||||||||||||||||||||| |||||    
T  16140155 agaacatcactcttttaaaaaaaa-tacgttttgattttatcaccggcctcttttcattcccagagccgagcctccgaattctcagggacg 16140244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 106; E-Value: 2e-52
Query Start/End: Original strand, 14 - 215
Target Start/End: Original strand, 19955713 - 19955913
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||| ||||| |||||||||||||||| ||||| |||||||||||||||||||||    
T  19955713 tttggtgttaggtgggggttcctcatatatacggtagtcattttcacctttgggtgtaccgcatatatacggtaccttatatttatcttttaaaaaatat 19955812  T
Q  114 aaatagaacattgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccct 213  Q
    ||||||| ||||||| ||||         |  |||||||||||||||||| ||||||||||||   ||||||||||||||||||||| | |||| |||||    
T  19955813 aaatagatcattgct-ttttaaaaaaaaattcgttttgattttatcactggcctcttttcattctcagagccgagcctccgaattcttagggacagccct 19955911  T
Q  214 gt 215  Q
    ||    
T  19955912 gt 19955913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 105; E-Value: 8e-52
Query Start/End: Original strand, 14 - 214
Target Start/End: Complemental strand, 9173140 - 9172940
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||| | |||||||||||||||||||||| |||||||||||||||||||||    
T  9173140 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctttggatgtaccgcatatatacggcaccttatatttatcttttaaaaaatat 9173041  T
Q  114 aaatagaacattgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccct 213  Q
    ||||||||||||| | |||          ||  |||| | |||||||| | |||||||||||| | ||||||||||||||||||||| | ||||||||||    
T  9173040 aaatagaacattgttttttaaaacaaaaatacatttttaatttatcaccggcctcttttcattcccagagccgagcctccgaattcttagggacggccct 9172941  T
Q  214 g 214  Q
    |    
T  9172940 g 9172940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 105; E-Value: 8e-52
Query Start/End: Original strand, 14 - 214
Target Start/End: Complemental strand, 9181122 - 9180922
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||| | |||||||||||||||||||||| |||||||||||||||||||||    
T  9181122 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctttggatgtaccgcatatatacggcaccttatatttatcttttaaaaaatat 9181023  T
Q  114 aaatagaacattgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccct 213  Q
    ||||||||||||| | |||          ||  |||| | |||||||| | |||||||||||| | ||||||||||||||||||||| | ||||||||||    
T  9181022 aaatagaacattgttttttaaaacaaaaatacatttttaatttatcaccggcctcttttcattcccagagccgagcctccgaattcttagggacggccct 9180923  T
Q  214 g 214  Q
    |    
T  9180922 g 9180922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 105; E-Value: 8e-52
Query Start/End: Original strand, 14 - 214
Target Start/End: Complemental strand, 40501907 - 40501707
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    ||||||||||||||| ||||| |||||||||||||||||||||| |||| ||||| ||||||||||||||| |||||| |||||||||||||||||||||    
T  40501907 tttggtgttaggtggaggttcttcatgtatacggtagtcatttttacctttgggtgtaccgcatatatacgacaccttatatttatcttttaaaaaatat 40501808  T
Q  114 aaatagaacattgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccct 213  Q
    ||||||| |||| || ||||         || |||||||||||||||||||||||||||||||   |||| |||||||||||||||| | ||||||||||    
T  40501807 aaatagatcattactttttttttaaaaaatacgttttgattttatcactgacctcttttcattctcagagtcgagcctccgaattcttagggacggccct 40501708  T
Q  214 g 214  Q
    |    
T  40501707 g 40501707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 104; E-Value: 3e-51
Query Start/End: Original strand, 14 - 197
Target Start/End: Complemental strand, 41697254 - 41697072
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||| | ||| |||||||||||  || ||||||||||||||||||||||||    
T  41697254 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacttctggatgtactgcatatatacgatactttgtatttatcttttaaaaaatat 41697155  T
Q  114 aaatagaacattgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaat 197  Q
    ||||||||||| ||||||||         || ||||||||||||||||||||||||||||||| | |||||||||| |||||||    
T  41697154 aaatagaacatcgctcttttaaaaaaaa-tacgttttgattttatcactgacctcttttcattcccagagccgagcttccgaat 41697072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 99; E-Value: 3e-48
Query Start/End: Original strand, 14 - 199
Target Start/End: Complemental strand, 1366995 - 1366812
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| || ||||| |||||||||||||||||||||| |||||||||||||||||||||    
T  1366995 tttggtgttaggtgggggttcctcgtgtatacggtagtcattttcatctttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaatat 1366896  T
Q  114 aaatagaacattgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattc 199  Q
    ||||||||||||||||  ||         |||||||| | |||||||||| |||||||||||| | ||||| |||||||| |||||    
T  1366895 aaatagaacattgctc--ttaaaaaaaaatatgttttcaatttatcactggcctcttttcattcccagagctgagcctccaaattc 1366812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 98; E-Value: 1e-47
Query Start/End: Original strand, 16 - 133
Target Start/End: Original strand, 27559635 - 27559752
Alignment:
Q  16 tggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataa 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||| |||||| |||||||||||||||||||||||    
T  27559635 tggtgttaggtgggggttcctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacgacaccttatatttatcttttaaaaaatataa 27559734  T
Q  116 atagaacattgctctttt 133  Q
    ||||||||||||| ||||    
T  27559735 atagaacattgctttttt 27559752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 96; E-Value: 2e-46
Query Start/End: Original strand, 39 - 215
Target Start/End: Complemental strand, 21741029 - 21740851
Alignment:
Q  39 tgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctctttt--nnn 136  Q
    |||||| ||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||         
T  21741029 tgtatatggtagtcattttcacctctgggtgtatcgcatatatacggcaccttgtatttatcttttaaaaaatacaaatagaacattgctcttttaaaaa 21740930  T
Q  137 nnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccctgt 215  Q
          ||  ||||||||||||||||| ||||||||||||   ||||||||||||||||||||||| ||||||||||||    
T  21740929 aaaaaatacattttgattttatcactggcctcttttcattctcagagccgagcctccgaattctcaaggacggccctgt 21740851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 91; E-Value: 2e-43
Query Start/End: Original strand, 14 - 198
Target Start/End: Complemental strand, 51607557 - 51607374
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacgg-caccttgtatttatcttttaaaaaata 112  Q
    |||||| |||| |||| |||||||||||||||||||||||||||||| | ||||| |||||||||||||||| |||||| ||||||||||||||||||||    
T  51607557 tttggtattagatgggagttcctcatgtatacggtagtcattttcacgtttgggtgtaccgcatatatacggccaccttatatttatcttttaaaaaata 51607458  T
Q  113 taaatagaacattgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaatt 198  Q
    |||||| ||||||  | ||||         || ||||||||||||||||||||||||||||||| | |||||||||||||||||||    
T  51607457 taaataaaacatt--ttttttttaaaaaaatacgttttgattttatcactgacctcttttcattcccagagccgagcctccgaatt 51607374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 86; E-Value: 2e-40
Query Start/End: Original strand, 41 - 214
Target Start/End: Original strand, 6889634 - 6889805
Alignment:
Q  41 tatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctcttttnnnnnnn 140  Q
    ||||||| | |||||||||||||||| | |||||||||||||||  || ||||||||||||||||||||||||||||||||||||||||||||           
T  6889634 tatacggcaatcattttcacctctggatgtaccgcatatatacgatactttgtatttatcttttaaaaaatataaatagaacattgctcttttaaaaaaa 6889733  T
Q  141 nttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccctg 214  Q
      || |||||||||||||||||||||||||||||||   ||| ||||||||||||||| ||| |||||||||||    
T  6889734 --tacgttttgattttatcactgacctcttttcattctcagaaccgagcctccgaattttcaaggacggccctg 6889805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 86; E-Value: 2e-40
Query Start/End: Original strand, 41 - 214
Target Start/End: Original strand, 6891480 - 6891651
Alignment:
Q  41 tatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctcttttnnnnnnn 140  Q
    ||||||| | |||||||||||||||| | |||||||||||||||  || ||||||||||||||||||||||||||||||||||||||||||||           
T  6891480 tatacggcaatcattttcacctctggatgtaccgcatatatacgatactttgtatttatcttttaaaaaatataaatagaacattgctcttttaaaaaaa 6891579  T
Q  141 nttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccctg 214  Q
      || |||||||||||||||||||||||||||||||   ||| ||||||||||||||| ||| |||||||||||    
T  6891580 --tacgttttgattttatcactgacctcttttcattctcagaaccgagcctccgaattttcaaggacggccctg 6891651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 82; E-Value: 4e-38
Query Start/End: Original strand, 53 - 214
Target Start/End: Complemental strand, 22865538 - 22865378
Alignment:
Q  53 attttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctcttttnnnnnnnnttatgttttga 152  Q
    |||||||||| ||||| ||||| |||||||  ||| |||||||||||||||||||||||||||||||||||||||||||||         || |||||||    
T  22865538 attttcacctttgggtgtaccg-atatatagagcatcttgtatttatcttttaaaaaatataaatagaacattgctcttttgaaaaaaaatacgttttga 22865440  T
Q  153 ttttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccctg 214  Q
    |||||||| ||||||||||||||| | ||||||| ||||||||||||||| |||||||||||    
T  22865439 ttttatcattgacctcttttcattcccagagccgtgcctccgaattctcagggacggccctg 22865378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 81; E-Value: 2e-37
Query Start/End: Original strand, 14 - 211
Target Start/End: Complemental strand, 13913599 - 13913401
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatata--cggcaccttgtatttatcttttaaaaaat 111  Q
    |||||||||||||||||||| |||||||||||||||||||||||||| | | ||| |||||||||||||  ||||| ||| |||||||||||||||||||    
T  13913599 tttggtgttaggtgggggtttctcatgtatacggtagtcattttcacttttaggtgtaccgcatatatacccggcaacttatatttatcttttaaaaaat 13913500  T
Q  112 ataaatagaacattgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggcc 211  Q
    ||||||||| ||||||| ||||         ||  ||||||||||||||||| | ||||||||||   |||||| |||||||||||||| | ||||||||    
T  13913499 ataaatagatcattgct-tttttaaaaaaaatacattttgattttatcactggcatcttttcattctcagagccaagcctccgaattcttagggacggcc 13913401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 67; E-Value: 4e-29
Query Start/End: Original strand, 30 - 132
Target Start/End: Complemental strand, 38547137 - 38547035
Alignment:
Q  30 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctc 129  Q
    ||||||||||||||| | |||| |||||||| | ||||| |||| ||||||||||||||||||||||||||||||||||||| |||||||||||||| ||    
T  38547137 ggttcctcatgtatatgatagtgattttcacatttgggtgtaccacatatatacggcaccttgtatttatcttttaaaaaatttaaatagaacattgatc 38547038  T
Q  130 ttt 132  Q
    |||    
T  38547037 ttt 38547035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 63; E-Value: 1e-26
Query Start/End: Original strand, 14 - 198
Target Start/End: Original strand, 44895648 - 44895827
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||| ||||| ||||      |  || |||||| |||||||||||||||||||||    
T  44895648 tttggtgttaggtgggggttcctcatgtatacggtaatcattttcacctttgggtgtacc------acccgccaccttatatttatcttttaaaaaatat 44895741  T
Q  114 aaatagaacattgctctttt-nnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaatt 198  Q
    ||||||| ||||| | ||||          |||||||||||||| |||| |||||||||||||| | ||| |||| ||||||||||    
T  44895742 aaatagatcattgtttttttaaaaaaaaaatatgttttgattttttcaccgacctcttttcattcccagaaccgaacctccgaatt 44895827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 35 - 133
Target Start/End: Original strand, 38853539 - 38853637
Alignment:
Q  35 ctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctctttt 133  Q
    ||||||||||||||||| |||||||||| ||| |||||  |||||||||| ||||||||||||||| |||||||||| ||||||||||| || ||||||    
T  38853539 ctcatgtatacggtagtgattttcacctttggatatacaacatatatacgacaccttgtatttatcatttaaaaaatttaaatagaacactgttctttt 38853637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 57; E-Value: 4e-23
Query Start/End: Original strand, 30 - 133
Target Start/End: Complemental strand, 39134824 - 39134720
Alignment:
Q  30 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatc-ttttaaaaaatataaatagaacattgct 128  Q
    |||||||||||||||| ||||| ||| |||||| ||||| ||  |||||||||| |||||||||||||||| ||||||||||| |||||||||||||| |    
T  39134824 ggttcctcatgtatacagtagtgattatcacctttgggtgtattgcatatatacagcaccttgtatttatctttttaaaaaatttaaatagaacattgtt 39134725  T
Q  129 ctttt 133  Q
    |||||    
T  39134724 ctttt 39134720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 30 - 133
Target Start/End: Original strand, 45758506 - 45758609
Alignment:
Q  30 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctc 129  Q
    |||||||||||||||||||||| |||||||||| ||| | ||   |||||||||  ||||||| |||||||||||||||||| |||||||||||||| ||    
T  45758506 ggttcctcatgtatacggtagtgattttcacctttggatgtataacatatatacaacaccttgcatttatcttttaaaaaatttaaatagaacattgttc 45758605  T
Q  130 tttt 133  Q
    ||||    
T  45758606 tttt 45758609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 53; E-Value: 9e-21
Query Start/End: Original strand, 1139 - 1299
Target Start/End: Complemental strand, 15329508 - 15329348
Alignment:
Q  1139 agaacatgctcgcttatagattacaaaggcatgaagtgtgagcttcagtttgcagagtatgttttgaagaatgccaacttactgcgcacgatgacaatta 1238  Q
    |||||||||||| |||||| ||| ||||||||||| |||||||||||||||| ||||||| | |||||||| || ||  || ||| ||| |||| |||||    
T  15329508 agaacatgctcgattataggttataaaggcatgaaatgtgagcttcagtttgtagagtatatattgaagaacgcaaaagtattgcacaccatgaaaatta 15329409  T
Q  1239 gtgcctctccaggggatttaactttaaagcaccaaatgctaatggatttatctttgtgtcc 1299  Q
     ||||||||  | |||| ||| | | ||| |||||||||||||| | |||||| |||||||    
T  15329408 atgcctctctcgtggatataaatatgaagtaccaaatgctaatgaaattatctctgtgtcc 15329348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 32 - 133
Target Start/End: Original strand, 5533326 - 5533428
Alignment:
Q  32 ttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatctttt-aaaaaatataaatagaacattgctct 130  Q
    |||||||||||||||||||| |||||||||| ||  | |||  ||||||||||||||||||| |||||||||| ||||||| ||||||||| |||| |||    
T  5533326 ttcctcatgtatacggtagtgattttcacctttgattgtacatcatatatacggcaccttgtgtttatcttttaaaaaaatttaaatagaatattgttct 5533425  T
Q  131 ttt 133  Q
    |||    
T  5533426 ttt 5533428  T

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Target: chr1; HSP #34
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 146 - 208
Target Start/End: Original strand, 34247154 - 34247216
Alignment:
Q  146 gttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacg 208  Q
    |||||||||||||||||||||| |||||||||| ||||||||||||||||||||||| |||||    
T  34247154 gttttgattttatcactgaccttttttcatttccagagccgagcctccgaattctcaaggacg 34247216  T

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Target: chr1; HSP #35
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 43 - 125
Target Start/End: Original strand, 35392295 - 35392376
Alignment:
Q  43 tacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacatt 125  Q
    ||||||||| |||||||||| ||| |||||||||||||||||||||||||||||||||  ||||||||| |||||| ||||||    
T  35392295 tacggtagtgattttcacctttggatataccgcatatatacggcaccttgtatttatc-cttaaaaaatttaaataaaacatt 35392376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 48; E-Value: 9e-18
Query Start/End: Original strand, 30 - 132
Target Start/End: Original strand, 26803960 - 26804059
Alignment:
Q  30 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctc 129  Q
    |||| ||||||||||||||||| |||||||||| || ||||  |||||||||||| || ||||||||||||||||||||||| |||||| | ||||| ||    
T  26803960 ggtttctcatgtatacggtagtgattttcacct-tgtgtat--cgcatatatacgacatcttgtatttatcttttaaaaaatttaaatatagcattgttc 26804056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 48; E-Value: 9e-18
Query Start/End: Original strand, 30 - 133
Target Start/End: Original strand, 50146308 - 50146411
Alignment:
Q  30 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctc 129  Q
    ||||||||||||||| |||| | ||||| |||| ||||| || | |||||| ||||||||||| |||||||||| ||||| | |||||||||||||| ||    
T  50146308 ggttcctcatgtatagggtaatgatttttacctttgggtctatcacatatacacggcaccttgcatttatctttcaaaaagtttaaatagaacattgttc 50146407  T
Q  130 tttt 133  Q
    ||||    
T  50146408 tttt 50146411  T

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Target: chr1; HSP #38
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 30 - 125
Target Start/End: Complemental strand, 43235871 - 43235774
Alignment:
Q  30 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttt--taaaaaatataaatagaacatt 125  Q
    ||||||||||||||||| |||| |||||||||| ||||| |||  |||||||||| || |||||||||||||||   ||||||| |||||||||||||    
T  43235871 ggttcctcatgtatacgatagtgattttcacctttgggtgtacatcatatatacgacatcttgtatttatctttaaaaaaaaatttaaatagaacatt 43235774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 30 - 126
Target Start/End: Original strand, 33170771 - 33170867
Alignment:
Q  30 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattg 126  Q
    |||| ||||||||||||||||| |||||||||  | ||| ||||||||||||||  ||| |||||||||  ||||||||||| |||||| |||||||    
T  33170771 ggtttctcatgtatacggtagtgattttcaccatttggtgtaccgcatatatacaacacattgtatttacgttttaaaaaatttaaatataacattg 33170867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 70 - 133
Target Start/End: Complemental strand, 17322684 - 17322621
Alignment:
Q  70 taccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctctttt 133  Q
    |||||||||||||||  || |||||||||||||| |||||||||||||||||||||| ||||||    
T  17322684 taccgcatatatacgctacattgtatttatctttaaaaaaatataaatagaacattgttctttt 17322621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 43; E-Value: 0.000000000000008
Query Start/End: Original strand, 30 - 132
Target Start/End: Original strand, 6221690 - 6221791
Alignment:
Q  30 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctc 129  Q
    |||||||||| |||||| || | |||||||| | | | | |||||| |||||||||||| ||||||||||||||| |||||| |||||||||||||| ||    
T  6221690 ggttcctcatatatacgataatgattttcacattttgatgtaccgcttatatacggcacattgtatttatctttt-aaaaatttaaatagaacattgttc 6221788  T
Q  130 ttt 132  Q
    |||    
T  6221789 ttt 6221791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 38; E-Value: 0.000000000008
Query Start/End: Original strand, 33 - 133
Target Start/End: Complemental strand, 10926052 - 10925951
Alignment:
Q  33 tcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaa-atataaatagaacattgctctt 131  Q
    ||||||||||||||||||| ||||||| || ||| |  | | |||||||||||||| |||||||||| ||||||||| |  ||||||||| |||| ||||    
T  10926052 tcctcatgtatacggtagtgattttcatctttggatgcatctcatatatacggcacattgtatttattttttaaaaatacttaaatagaatattgttctt 10925953  T
Q  132 tt 133  Q
    ||    
T  10925952 tt 10925951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 306 - 367
Target Start/End: Original strand, 52035084 - 52035145
Alignment:
Q  306 gatatcaatcgatttgttcctgttgctgtcaaaaaaggaattgagaatctcatcttagattt 367  Q
    |||||||||||||||||||||||||||||  ||  |||| ||| || | |||||||||||||    
T  52035084 gatatcaatcgatttgttcctgttgctgttcaacgaggacttgtgagtttcatcttagattt 52035145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 180 - 217
Target Start/End: Complemental strand, 52127494 - 52127457
Alignment:
Q  180 agagccgagcctccgaattctcatggacggccctgtgt 217  Q
    ||||||||||||||||||||||| |||||| |||||||    
T  52127494 agagccgagcctccgaattctcagggacggtcctgtgt 52127457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 141; Significance: 3e-73; HSPs: 56)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 141; E-Value: 3e-73
Query Start/End: Original strand, 14 - 202
Target Start/End: Complemental strand, 38209708 - 38209520
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  38209708 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatat 38209609  T
Q  114 aaatagaacattgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctca 202  Q
    |||||||||||||||||||         |||| ||||||||||||||||| |||||||||||||| |||||||||||||| ||||||||    
T  38209608 aaatagaacattgctctttaaaaaaaaattatattttgattttatcactggcctcttttcatttccagagccgagcctccaaattctca 38209520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 133; E-Value: 2e-68
Query Start/End: Original strand, 14 - 210
Target Start/End: Original strand, 47128977 - 47129172
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  47128977 tttggtgttaggtgggggttcctcatgtatacggtagtcatttttacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatat 47129076  T
Q  114 aaatagaacattgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggc 210  Q
    ||||||||||||| ||||||         ||  ||||||||||||||||| |||||||||||||| ||||||||||||||||||||||| |||||||    
T  47129077 aaatagaacattgttcttttaaaaaaaa-tacattttgattttatcactggcctcttttcatttccagagccgagcctccgaattctcagggacggc 47129172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 133; E-Value: 2e-68
Query Start/End: Original strand, 18 - 217
Target Start/End: Original strand, 54780771 - 54780971
Alignment:
Q  18 gtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaat 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  54780771 gtgttaggtgggggttcctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaat 54780870  T
Q  118 agaacattgctctttt-nnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccctgtg 216  Q
    ||||||||||||||||          || |||||||||||||||||| |||||||||||| | |||||| |||||||||||||||| |||||||||||||    
T  54780871 agaacattgctcttttaaaaaaaaaatacgttttgattttatcactggcctcttttcattcccagagccaagcctccgaattctcagggacggccctgtg 54780970  T
Q  217 t 217  Q
    |    
T  54780971 t 54780971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 129; E-Value: 4e-66
Query Start/End: Original strand, 14 - 214
Target Start/End: Complemental strand, 34768691 - 34768492
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||    
T  34768691 tttggtgttaggtgggggttcctcatgtatacggtaatcattttcacctctgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaatat 34768592  T
Q  114 aaatagaacattgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccct 213  Q
    ||||||||||||||||||||         ||||||||||||||||||||  |||||||||||| | | ||||||||||||||||||||| ||||| ||||    
T  34768591 aaatagaacattgctcttttaaaaaaaa-tatgttttgattttatcactagcctcttttcattcccaaagccgagcctccgaattctcagggacgaccct 34768493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 126; E-Value: 2e-64
Query Start/End: Original strand, 14 - 215
Target Start/End: Original strand, 32915375 - 32915576
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    |||||||||||||||||||||||||||||||||||| ||||||| |||||||||| |||| |||||||||||||||||||||||||||||||||||||||    
T  32915375 tttggtgttaggtgggggttcctcatgtatacggtaatcatttttacctctgggtgtaccacatatatacggcaccttgtatttatcttttaaaaaatat 32915474  T
Q  114 aaatagaacattgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccct 213  Q
    ||||||||||| ||||||||            |||||||||||||||||| |||||||||||| | ||||||||||||||||||||||| ||||||||||    
T  32915475 aaatagaacatcgctcttttaaaaaaaaaaccgttttgattttatcactggcctcttttcattcccagagccgagcctccgaattctcagggacggccct 32915574  T
Q  214 gt 215  Q
    ||    
T  32915575 gt 32915576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 124; E-Value: 4e-63
Query Start/End: Original strand, 17 - 200
Target Start/End: Complemental strand, 43455645 - 43455463
Alignment:
Q  17 ggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaa 116  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||| ||||||||||||||||||||||||    
T  43455645 ggtgttaggtgggggttcctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaatataaa 43455546  T
Q  117 tagaacattgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattct 200  Q
    |||||||||||||||||         || ||||||||||||||||||||||||||||||| | |||| ||||||||||||||||    
T  43455545 tagaacattgctcttttaaaaataa-tacgttttgattttatcactgacctcttttcattcccagagtcgagcctccgaattct 43455463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 121; E-Value: 2e-61
Query Start/End: Original strand, 14 - 214
Target Start/End: Original strand, 32128574 - 32128774
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    |||||||||||||||||||| || ||||||||||||||||||||||||| ||||| ||||||||||||||| |||||| |||||||||||||||||||||    
T  32128574 tttggtgttaggtgggggtttcttatgtatacggtagtcattttcacctttgggtgtaccgcatatatacgacaccttatatttatcttttaaaaaatat 32128673  T
Q  114 aaatagaacattgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccct 213  Q
    ||||||||||||||||||||         || |||||||||||||||||||||| |||||||| | |||||||||||||| |||||| | ||||||||||    
T  32128674 aaatagaacattgctcttttaaaaaaaaatacgttttgattttatcactgaccttttttcattcccagagccgagcctccaaattcttagggacggccct 32128773  T
Q  214 g 214  Q
    |    
T  32128774 g 32128774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 121; E-Value: 2e-61
Query Start/End: Original strand, 14 - 214
Target Start/End: Original strand, 34027569 - 34027768
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||| ||||| ||||||||||||||| |||||| |||||||||||||||||||||    
T  34027569 tttggtgttaggtgggggttcctcatgtataccgtagtcattttcacctttgggtgtaccgcatatatacgacaccttatatttatcttttaaaaaatat 34027668  T
Q  114 aaatagaacattgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccct 213  Q
    ||||||||||||||| ||||         || |||||||||||||||||| |||||||||||| | ||||||||||||||||||||| | ||||||||||    
T  34027669 aaatagaacattgct-ttttttaaaaaaatacgttttgattttatcactggcctcttttcattcccagagccgagcctccgaattcttagggacggccct 34027767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 117; E-Value: 6e-59
Query Start/End: Original strand, 14 - 198
Target Start/End: Complemental strand, 37777340 - 37777156
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    ||||||||||| || |||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||| |||||||||||||||||||||    
T  37777340 tttggtgttagttgagggttcctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaatat 37777241  T
Q  114 aaatagaacattgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaatt 198  Q
    |||||||||||| || ||||         || ||||||||||||||||||||||||||||||| | |||||||||||||||||||    
T  37777240 aaatagaacattactttttttttaaaaaatacgttttgattttatcactgacctcttttcattcccagagccgagcctccgaatt 37777156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 116; E-Value: 2e-58
Query Start/End: Original strand, 14 - 214
Target Start/End: Original strand, 10978890 - 10979092
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||| ||||||||||||||||||||||||||||    
T  10978890 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacttctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatat 10978989  T
Q  114 aaatagaacattgctctttt--nnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggcc 211  Q
    ||||||||||||||||||||           || ||||||||||||||||| ||||||||||||| | |||||  | ||||||||||||||  |||||||    
T  10978990 aaatagaacattgctcttttaaaaaaaaaaatacgttttgattttatcactaacctcttttcattcccagagctaaacctccgaattctcagagacggcc 10979089  T
Q  212 ctg 214  Q
    |||    
T  10979090 ctg 10979092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 113; E-Value: 1e-56
Query Start/End: Original strand, 14 - 210
Target Start/End: Original strand, 1105522 - 1105717
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    |||||||||||||||||||| |||||||||| ||||||||||||||||||| ||| |||||||||||||||  |||||||||||||||||||||||||||    
T  1105522 tttggtgttaggtgggggttgctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgataccttgtatttatcttttaaaaaatat 1105621  T
Q  114 aaatagaacattgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggc 210  Q
    |||||||||||  |||||||         || ||||||||||||||||||||||||||||||| | ||||||||||||| ||||||||| |||||||    
T  1105622 aaatagaacatcactcttttaaaaaaaa-tacgttttgattttatcactgacctcttttcattcccagagccgagcctctgaattctcaaggacggc 1105717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 110; E-Value: 9e-55
Query Start/End: Original strand, 21 - 214
Target Start/End: Complemental strand, 2790851 - 2790659
Alignment:
Q  21 ttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaataga 120  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||| ||||| ||||||||||||||||||||||||||||    
T  2790851 ttaggtgggggttcctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacggtaccttatatttatcttttaaaaaatataaataga 2790752  T
Q  121 acattgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccctg 214  Q
    |||||| ||||||          ||||||||||||||||||||  ||||||||||| | ||||||||||||||||||||| |  ||||||||||    
T  2790751 acattgttcttttaaaaaaaa-aatgttttgattttatcactggtctcttttcattcccagagccgagcctccgaattcttagagacggccctg 2790659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 108; E-Value: 1e-53
Query Start/End: Original strand, 14 - 217
Target Start/End: Complemental strand, 10428322 - 10428113
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcac--------ctctgggtataccgcatatatacggcaccttgtatttatctttta 105  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||        |||||||| ||||||||||||||||||||||||||||||||||||    
T  10428322 tttggtgttaggtggaggttcctcatgtatacggtagtcattttcacaatttcacctctgggtgtaccgcatatatacggcaccttgtatttatctttta 10428223  T
Q  106 aaaaatataaatagaacattgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatgg 205  Q
    |||||||||||||||||||||  |||||         ||  ||||||||||| |||||||||||||||||| | ||||||||||||||||||||||  ||    
T  10428222 aaaaatataaatagaacattg--ctttttaaaaaaaataaattttgattttagcactgacctcttttcattcccagagccgagcctccgaattctcgagg 10428125  T
Q  206 acggccctgtgt 217  Q
    ||||||||||||    
T  10428124 acggccctgtgt 10428113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 108; E-Value: 1e-53
Query Start/End: Original strand, 14 - 214
Target Start/End: Original strand, 55255259 - 55255447
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||              |||||||||||||||||||||||||||||||    
T  55255259 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgg------------cggcaccttgtatttatcttttaaaaaatat 55255346  T
Q  114 aaatagaacattgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccct 213  Q
    |||| |||||||||||||||        |||||||||||||||||||||| |||||||||||||  ||||||||||||||||||||||| ||||||||||    
T  55255347 aaatggaacattgctcttttaaaaaaaattatgttttgattttatcactggcctcttttcattttcagagccgagcctccgaattctcagggacggccct 55255446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 107; E-Value: 5e-53
Query Start/End: Original strand, 14 - 214
Target Start/End: Original strand, 48209230 - 48209436
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    |||||||||||||||||||| |||||||||||||||||||| ||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  48209230 tttggtgttaggtgggggtttctcatgtatacggtagtcatattcacatctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatat 48209329  T
Q  114 aaatagaacattgctctttt-nnnnnnnnttatgttttgat-----tttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggac 207  Q
    ||||||||||||||||||||          || ||||||||     ||||||||||  ||||||||| | | ||||||||||||||||||||||| ||||    
T  48209330 aaatagaacattgctcttttaaaaaaaaaatacgttttgattttaatttatcactggtctcttttcactcccagagccgagcctccgaattctcagggac 48209429  T
Q  208 ggccctg 214  Q
    |||||||    
T  48209430 ggccctg 48209436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 106; E-Value: 2e-52
Query Start/End: Original strand, 14 - 214
Target Start/End: Complemental strand, 5128959 - 5128758
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||  || ||||||||||||||||||||||||||||||||||||||||    
T  5128959 tttggtgttaggtggaggttcctcatgtatacggtagtcattttcacctctgggtgcactgcatatatacggcaccttgtatttatcttttaaaaaatat 5128860  T
Q  114 aaatagaacattgctcttttnnnnnnnnttatgtttt-gattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccc 212  Q
    |||||||| || |||||| |          | ||||| ||||||||||||| |||||||||||| | |||||||||||||  |||||||| |||||||||    
T  5128859 aaatagaatatcgctcttctaaaaaaaaaaacgttttagattttatcactggcctcttttcattcccagagccgagcctctaaattctcagggacggccc 5128760  T
Q  213 tg 214  Q
    ||    
T  5128759 tg 5128758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 105; E-Value: 8e-52
Query Start/End: Original strand, 14 - 214
Target Start/End: Complemental strand, 54083359 - 54083160
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    ||||||||||||| |||||||||||||||||||||||||||||| | || ||||| |||||||||||||||||||||| |||||||||||||||||||||    
T  54083359 tttggtgttaggtaggggttcctcatgtatacggtagtcatttttatctttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaatat 54083260  T
Q  114 aaatagaacattgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccct 213  Q
    ||||||| ||||| | ||||         || |||||||||||||||||||||||||||||||   ||||||||||||||||||| | | ||||||||||    
T  54083259 aaatagatcattg-ttttttttaaaaaaatacgttttgattttatcactgacctcttttcattctcagagccgagcctccgaatttttagggacggccct 54083161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 103; E-Value: 1e-50
Query Start/End: Original strand, 14 - 215
Target Start/End: Original strand, 16845011 - 16845211
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatctttt-aaaaaata 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||  ||||| |||  |||||||||| |||||| |||||||||||| ||||||||    
T  16845011 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcaccgttgggtgtactacatatatacgacaccttatatttatcttttaaaaaaata 16845110  T
Q  113 taaatagaacattgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccc 212  Q
    |||||||||||||||||||||         || ||||||||||||||||||  || |||||||||| ||||||||||||||||||||| | |||||||||    
T  16845111 taaatagaacattgctcttttaaaaaaaa-tacgttttgattttatcactg-gcttttttcatttccagagccgagcctccgaattcttagggacggccc 16845208  T
Q  213 tgt 215  Q
    |||    
T  16845209 tgt 16845211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 102; E-Value: 5e-50
Query Start/End: Original strand, 14 - 214
Target Start/End: Original strand, 19498494 - 19498691
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||| ||| | ||||||||||  |||||||||| |||||||||||||||||||||    
T  19498494 tttggtgttaggtgggggttcctcatgtatacagtagtcattttcacctttggctgtaccgcatat--acggcaccttatatttatcttttaaaaaatat 19498591  T
Q  114 aaatagaacattgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccct 213  Q
    ||||||||||||||||||||         || ||||||||||||||| || ||| |||||||| | ||||||||||||||||||||| |  |||||||||    
T  19498592 aaatagaacattgctcttttaaacaaaa-tacgttttgattttatcattggcctgttttcattcctagagccgagcctccgaattcttagtgacggccct 19498690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 101; E-Value: 2e-49
Query Start/End: Original strand, 14 - 217
Target Start/End: Original strand, 40089506 - 40089717
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaa------ 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||| | |||||||||||||||||||||| |||||||||||||||          
T  40089506 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctttggatgtaccgcatatatacggcaccttatatttatcttttaaaaatata 40089605  T
Q  108 ---aaatataaatagaacattgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatg 204  Q
       ||||||||||| ||||||||| ||||         || |||||||||||||||||||| |||||||||| ||||||||||||||||||||||| | |    
T  40089606 aataaatataaataaaacattgct-tttttaaaaaaaatacgttttgattttatcactgacttcttttcattccaagagccgagcctccgaattcttagg 40089704  T
Q  205 gacggccctgtgt 217  Q
    |||| ||||||||    
T  40089705 gacgaccctgtgt 40089717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 100; E-Value: 8e-49
Query Start/End: Original strand, 14 - 215
Target Start/End: Original strand, 37514649 - 37514849
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    ||||||||||||||||| ||| |||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||    
T  37514649 tttggtgttaggtggggattcttcatgtatacggtagtcattttcacctctgagtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatat 37514748  T
Q  114 aaatagaacattgctcttt-tnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccc 212  Q
    ||||||||||| |||||||           || |||||||||||||||||| |||||||||||| |    || |||||||| |||||||| |||||||||    
T  37514749 aaatagaacatcgctctttaaaaaaaaaaatacgttttgattttatcactggcctcttttcattcc--ccgctgagcctccaaattctcagggacggccc 37514846  T
Q  213 tgt 215  Q
    |||    
T  37514847 tgt 37514849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 98; E-Value: 1e-47
Query Start/End: Original strand, 14 - 123
Target Start/End: Original strand, 13460197 - 13460306
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  13460197 tttggtgttaggtgggggttccttatgtatacggtagtcattttcacatctgggtataccgcatatatacgacaccttgtatttatcttttaaaaaatat 13460296  T
Q  114 aaatagaaca 123  Q
    ||||||||||    
T  13460297 aaatagaaca 13460306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 93; E-Value: 1e-44
Query Start/End: Original strand, 14 - 214
Target Start/End: Complemental strand, 16882512 - 16882313
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    |||||||||||||| ||||||| |||  ||||||||||||||||||||| | ||| ||||| ||||| |||||||||| ||||||||||||||||| |||    
T  16882512 tttggtgttaggtgagggttccccatacatacggtagtcattttcaccttttggtgtaccgtatatacacggcaccttatatttatcttttaaaaagtat 16882413  T
Q  114 aaatagaacattgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccct 213  Q
    ||||||||||||| | ||||         || |||||||||||||||||||| |||||||||| | ||||||||||||||||||||| | ||||||||||    
T  16882412 aaatagaacattg-ttttttttaaaaaaatacgttttgattttatcactgacttcttttcattcctagagccgagcctccgaattcttagggacggccct 16882314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 93; E-Value: 1e-44
Query Start/End: Original strand, 14 - 202
Target Start/End: Original strand, 35465097 - 35465283
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    ||||||||||||||||| |||||||||||||||||||| |||||||| | | ||| |||||||||||||| ||||||| |||||||||| ||||||||||    
T  35465097 tttggtgttaggtggggattcctcatgtatacggtagttattttcacttttaggtgtaccgcatatatac-gcaccttttatttatcttgtaaaaaatat 35465195  T
Q  114 aaatagaacattgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctca 202  Q
    ||||| ||||||| ||||||         |||||||||||||||||||||||||||||||||| | |||  ||||||||||||||||||    
T  35465196 aaatataacattgttcttttaaaaaaaa-tatgttttgattttatcactgacctcttttcattcccagaatcgagcctccgaattctca 35465283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 90; E-Value: 7e-43
Query Start/End: Original strand, 14 - 211
Target Start/End: Complemental strand, 35779442 - 35779248
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    |||| |||||||||  |||||||||||||||||||| |||||||||||| ||||| ||||||||||||||| ||||||||||||||||||||||||||||    
T  35779442 tttgatgttaggtgaaggttcctcatgtatacggtaatcattttcacctttgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatat 35779343  T
Q  114 aaatagaacattgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggcc 211  Q
     ||||||||||||||||||          || |||||||||||||||||  |||||||||||| |  ||| ||| |||||||||||||| ||||||||    
T  35779342 -aatagaacattgctcttt--aaaaaaaatacgttttgattttatcactagcctcttttcattcctcgagtcgaacctccgaattctcaaggacggcc 35779248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 87; E-Value: 5e-41
Query Start/End: Original strand, 56 - 214
Target Start/End: Original strand, 17679432 - 17679589
Alignment:
Q  56 ttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctcttttnnnnnnnnttatgttttgattt 155  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||         || ||||||||||    
T  17679432 ttcacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaatattgctcttttaaaaaaaa-tacgttttgattt 17679530  T
Q  156 tatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccctg 214  Q
    ||||||||  ||||||||||| | ||| |||||||||||||||||||  ||||||||||    
T  17679531 tatcactggtctcttttcattcccagaaccgagcctccgaattctcagagacggccctg 17679589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 76; E-Value: 2e-34
Query Start/End: Original strand, 14 - 200
Target Start/End: Complemental strand, 38352372 - 38352197
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||| ||||| ||||||          |||||| |||||||||||||||||||||    
T  38352372 tttggtgttaggtgggggttcctcatgtacacggtagtcattttcacctttgggtgtaccgc----------caccttatatttatcttttaaaaaatat 38352283  T
Q  114 aaatagaacattgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattct 200  Q
    ||||||| |||| || ||||         || ||||||||||||||||||| ||||||||||| | |||||||||||||||||||||    
T  38352282 aaatagatcattact-ttttaaaaaaaaatacgttttgattttatcactgatctcttttcattcccagagccgagcctccgaattct 38352197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 69; E-Value: 3e-30
Query Start/End: Original strand, 52 - 211
Target Start/End: Original strand, 51964736 - 51964897
Alignment:
Q  52 cattttcacctctgggtataccgcatatatacggcaccttgtatttatctttt---aaaaaatataaatagaacattgctcttttnnnnnnnnttatgtt 148  Q
    ||||||||||||||||| || ||||||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||         || |||    
T  51964736 cattttcacctctgggtgtatcgcatatatacggcaccttgtatttatctttttaaaaaaaatataaatagaacattgctcttttaaaaaaaa-tacgtt 51964834  T
Q  149 ttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggcc 211  Q
    ||||||||||||  | |||||||||||| | ||||||||| ||||||||| ||| ||| ||||    
T  51964835 ttgattttatcatcggcctcttttcattcccagagccgagtctccgaattttcaaggatggcc 51964897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 66; E-Value: 2e-28
Query Start/End: Original strand, 30 - 199
Target Start/End: Original strand, 52468292 - 52468459
Alignment:
Q  30 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctc 129  Q
    ||||||||||| |||||||||| |||||||||| ||| | ||   ||||||||||||||||||||||||||||||||||||| |||||||||||||| ||    
T  52468292 ggttcctcatgcatacggtagtgattttcacctttggatgtataacatatatacggcaccttgtatttatcttttaaaaaatttaaatagaacattgttc 52468391  T
Q  130 ttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattc 199  Q
    ||||         || ||||| ||||||| || ||||||||||||  |  ||||||||||||||||||||    
T  52468392 ttttaaaaaaa--tacgtttttattttattacagacctcttttcacctacagagccgagcctccgaattc 52468459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 65; E-Value: 6e-28
Query Start/End: Original strand, 51 - 214
Target Start/End: Complemental strand, 16922409 - 16922245
Alignment:
Q  51 tcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctctttt-nnnnnnnnttatgttt 149  Q
    |||||||||||| |||| |||| ||||||||||| ||| || |||||||||||||||||||||||||||||||||||||||||           | ||||    
T  16922409 tcattttcacctttggggatactgcatatatacgacactttatatttatcttttaaaaaatataaatagaacattgctcttttaaaaataaaaaacgttt 16922310  T
Q  150 tgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccctg 214  Q
    ||||||||||||||  ||||||||||| | | || ||||||||| |||||||| |||||||||||    
T  16922309 tgattttatcactggtctcttttcattcccaaagtcgagcctccaaattctcagggacggccctg 16922245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 65; E-Value: 6e-28
Query Start/End: Original strand, 14 - 133
Target Start/End: Original strand, 24969427 - 24969536
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||          |||||| |||||||||||||||||||||    
T  24969427 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctttgggtgtaccgc----------caccttatatttatcttttaaaaaatat 24969516  T
Q  114 aaatagaacattgctctttt 133  Q
    ||||||| ||||||| ||||    
T  24969517 aaatagatcattgctttttt 24969536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 63; E-Value: 1e-26
Query Start/End: Original strand, 30 - 112
Target Start/End: Complemental strand, 4167992 - 4167910
Alignment:
Q  30 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaata 112  Q
    ||||||||||||||| |||||| |||||||||| ||||| || ||||||||||||||||||||||||||||||||||||||||    
T  4167992 ggttcctcatgtataaggtagtgattttcacctttgggtgtatcgcatatatacggcaccttgtatttatcttttaaaaaata 4167910  T

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Target: chr4; HSP #33
Raw Score: 60; E-Value: 6e-25
Query Start/End: Original strand, 70 - 133
Target Start/End: Complemental strand, 51691976 - 51691913
Alignment:
Q  70 taccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctctttt 133  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  51691976 taccgcatatatacggcaccttgtatttatcttttaaaaaatttaaatagaacattgctctttt 51691913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 58; E-Value: 9e-24
Query Start/End: Original strand, 78 - 214
Target Start/End: Complemental strand, 23508564 - 23508427
Alignment:
Q  78 atatacggcaccttgtatttatcttttaaaaaat-ataaatagaacattgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatt 176  Q
    ||||||| |||||||||||||||||||||||||| |||||||||||||||||| ||          ||  ||||||||||||||||| ||||||||||||    
T  23508564 atatacgacaccttgtatttatcttttaaaaaattataaatagaacattgctcattaaaaaaaaaatacattttgattttatcactggcctcttttcatt 23508465  T
Q  177 tcaagagccgagcctccgaattctcatggacggccctg 214  Q
     | | ||||||||||||||||| |||||||||| ||||    
T  23508464 cccaaagccgagcctccgaattttcatggacggtcctg 23508427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 58; E-Value: 9e-24
Query Start/End: Original strand, 14 - 83
Target Start/End: Complemental strand, 23509915 - 23509846
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatac 83  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||| ||| ||||||||||||||    
T  23509915 tttggtgttaggtgggggttcctcatgtctacggtagtcattttcacctctaggtgtaccgcatatatac 23509846  T

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Target: chr4; HSP #36
Raw Score: 57; E-Value: 4e-23
Query Start/End: Original strand, 30 - 126
Target Start/End: Original strand, 27112036 - 27112132
Alignment:
Q  30 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattg 126  Q
    |||||||||||||||||||||| |||||||| | | ||| || |||||||||| | |||||||||||||||||||||||||| ||||| ||||||||    
T  27112036 ggttcctcatgtatacggtagtgattttcacattttggtgtatcgcatatatatgtcaccttgtatttatcttttaaaaaatttaaattgaacattg 27112132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 57; E-Value: 4e-23
Query Start/End: Original strand, 30 - 126
Target Start/End: Complemental strand, 36118559 - 36118463
Alignment:
Q  30 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattg 126  Q
    |||| ||||||||||||||||| |||||||  | ||||| || | |||||||||| |||||||||||||||||||||||||| ||||||||||||||    
T  36118559 ggttactcatgtatacggtagtgattttcatatttgggtgtatcacatatatacgacaccttgtatttatcttttaaaaaatttaaatagaacattg 36118463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 55; E-Value: 6e-22
Query Start/End: Original strand, 60 - 133
Target Start/End: Complemental strand, 9578736 - 9578662
Alignment:
Q  60 cctctgggtataccgcatatatacggc-accttgtatttatcttttaaaaaatataaatagaacattgctctttt 133  Q
    ||||||| | ||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  9578736 cctctggatgtaccgcatatatatggctaccttgtatttatcttttaaaaaatataaatagaacattgctctttt 9578662  T

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Target: chr4; HSP #39
Raw Score: 55; E-Value: 6e-22
Query Start/End: Original strand, 36 - 126
Target Start/End: Original strand, 36178684 - 36178774
Alignment:
Q  36 tcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattg 126  Q
    ||||||||| |||||| |||||||| | ||||| || |||||||||||| |||||||||||||||||||||| ||| ||||||||||||||    
T  36178684 tcatgtataaggtagtgattttcacatttgggtgtatcgcatatatacgacaccttgtatttatcttttaaataatttaaatagaacattg 36178774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 53; E-Value: 9e-21
Query Start/End: Original strand, 53 - 133
Target Start/End: Complemental strand, 39655332 - 39655252
Alignment:
Q  53 attttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctctttt 133  Q
    |||||||||| ||||| |||||||||||| ||| || |||||||||||||||||||||| |||||||||||||| ||||||    
T  39655332 attttcacctttgggtgtaccgcatatatgcggaactttgtatttatcttttaaaaaatttaaatagaacattgttctttt 39655252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 52; E-Value: 4e-20
Query Start/End: Original strand, 30 - 133
Target Start/End: Complemental strand, 10042101 - 10041998
Alignment:
Q  30 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctc 129  Q
    |||||||| ||||||||||||| |||||||| | | ||| || | |||| |||||||||||||||||||| |||| |||||| |||||||||||||| ||    
T  10042101 ggttcctcctgtatacggtagtgattttcacatttaggtgtatcacatacatacggcaccttgtatttatttttttaaaaatttaaatagaacattgttc 10042002  T
Q  130 tttt 133  Q
    ||||    
T  10042001 tttt 10041998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 52; E-Value: 4e-20
Query Start/End: Original strand, 30 - 133
Target Start/End: Original strand, 24396940 - 24397043
Alignment:
Q  30 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctc 129  Q
    ||||||||||||||||| |||| |||||||||| || || || | ||||||||| ||||||| ||||||||||||||||||| |||||| || |||| ||    
T  24396940 ggttcctcatgtatacgatagtgattttcacctttgagtgtatcacatatatactgcaccttatatttatcttttaaaaaatttaaataaaatattgttc 24397039  T
Q  130 tttt 133  Q
    ||||    
T  24397040 tttt 24397043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 30 - 126
Target Start/End: Complemental strand, 2135422 - 2135326
Alignment:
Q  30 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattg 126  Q
    |||||||||| |||||| |||| || || |||| ||| | || |||||||||||| |||||||||||||||||||||||||| ||||||||| ||||    
T  2135422 ggttcctcatatatacgatagtgatgtttacctttggatgtatcgcatatatacgacaccttgtatttatcttttaaaaaatttaaatagaatattg 2135326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 31 - 199
Target Start/End: Complemental strand, 39329492 - 39329325
Alignment:
Q  31 gttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctct 130  Q
    ||||||| |||||||||||   ||||||| || ||||| || | |||||||||  |||||||||||||||||||||||||| |||| ||||||||| |||    
T  39329492 gttcctcctgtatacggtatggattttcatctttgggtgtatcacatatatacaacaccttgtatttatcttttaaaaaatttaaagagaacattgttct 39329393  T
Q  131 tttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattc 199  Q
    |||         |||||||| ||||||| || |||||||||||| ||  ||| |||||||||| |||||    
T  39329392 tttaaaaaaaa-tatgtttttattttattacggacctcttttcacttacagaaccgagcctccaaattc 39329325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 48; E-Value: 9e-18
Query Start/End: Original strand, 30 - 124
Target Start/End: Complemental strand, 37745011 - 37744916
Alignment:
Q  30 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaa-aaaatataaatagaacat 124  Q
    ||||||||| |||||||||||| |||||||||| ||| | || ||||||||| || |||||| |||||||||||||| ||||| ||||||||||||    
T  37745011 ggttcctcaagtatacggtagtgattttcacctttggatgtatcgcatatatgcgacaccttatatttatcttttaaaaaaatttaaatagaacat 37744916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 38 - 133
Target Start/End: Complemental strand, 36362964 - 36362869
Alignment:
Q  38 atgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctctttt 133  Q
    ||||||| |||||| |||| ||| | ||||| ||  ||||||||||||||| |||||||||||||||||||||| |||| ||| ||||| ||||||    
T  36362964 atgtatatggtagtgatttccacatttgggtgtattgcatatatacggcactttgtatttatcttttaaaaaatttaaacagagcattgttctttt 36362869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 30 - 126
Target Start/End: Original strand, 45656181 - 45656277
Alignment:
Q  30 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattg 126  Q
    ||||| ||||||||||| | || |||||||| | ||| | || |||||||||| | ||||||| |||||||||||||||||| |||||| |||||||    
T  45656181 ggttcgtcatgtatacgttcgtgattttcacatttggatttatcgcatatatatgacaccttgcatttatcttttaaaaaatttaaataaaacattg 45656277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 38; E-Value: 0.000000000008
Query Start/End: Original strand, 30 - 119
Target Start/End: Original strand, 40217238 - 40217327
Alignment:
Q  30 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatag 119  Q
    |||| |||||||||| | || | ||||||| || ||| | || |||||||||||| |||||| ||||||||||||||||||| |||||||    
T  40217238 ggttactcatgtatatgctaatgattttcatctttggatgtatcgcatatatacgacaccttatatttatcttttaaaaaatttaaatag 40217327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 146 - 214
Target Start/End: Original strand, 24969718 - 24969786
Alignment:
Q  146 gttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccctg 214  Q
    |||||| ||||||||||  |||||||||||| | |||| |||||||||||||||| | |||||||||||    
T  24969718 gttttgtttttatcactagcctcttttcattcccagagtcgagcctccgaattcttagggacggccctg 24969786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 143 - 198
Target Start/End: Complemental strand, 2975413 - 2975358
Alignment:
Q  143 tatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaatt 198  Q
    |||||||||||||||||| ||||||||||||||||  |||||||||| | ||||||    
T  2975413 tatgttttgattttatcattgacctcttttcattttcagagccgagcattcgaatt 2975358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 159 - 214
Target Start/End: Original strand, 13460305 - 13460360
Alignment:
Q  159 cactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccctg 214  Q
    |||||||||||||| ||| | |||| |||||||||||||||||| |||||||||||    
T  13460305 cactgacctctttttattcccagagtcgagcctccgaattctcaaggacggccctg 13460360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 89 - 132
Target Start/End: Original strand, 24614018 - 24614061
Alignment:
Q  89 cttgtatttatcttttaaaaaatataaatagaacattgctcttt 132  Q
    ||||||||||||||||||||||| |||||||||||||| |||||    
T  24614018 cttgtatttatcttttaaaaaatttaaatagaacattgttcttt 24614061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 91 - 133
Target Start/End: Complemental strand, 30507162 - 30507120
Alignment:
Q  91 tgtatttatcttttaaaaaatataaatagaacattgctctttt 133  Q
    ||||||||||||||||||||| |||||||||||||| ||||||    
T  30507162 tgtatttatcttttaaaaaatttaaatagaacattgttctttt 30507120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 74 - 118
Target Start/End: Complemental strand, 29425231 - 29425187
Alignment:
Q  74 gcatatatacggcaccttgtatttatcttttaaaaaatataaata 118  Q
    |||||||||||||||||| ||||||| ||||||||||| ||||||    
T  29425231 gcatatatacggcaccttatatttattttttaaaaaatttaaata 29425187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 76 - 123
Target Start/End: Original strand, 15735142 - 15735189
Alignment:
Q  76 atatatacggcaccttgtatttatcttttaaaaaatataaatagaaca 123  Q
    ||||||||| |  ||||||||||||||||||||||| |||||||||||    
T  15735142 atatatacgacgtcttgtatttatcttttaaaaaatttaaatagaaca 15735189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 165 - 214
Target Start/End: Complemental strand, 9578624 - 9578575
Alignment:
Q  165 cctcttttcatttcaagagccgagcctccgaattctcatggacggccctg 214  Q
    |||||||||| | | |||| |||||||||||||||||| |||||||||||    
T  9578624 cctcttttcactcccagagtcgagcctccgaattctcaaggacggccctg 9578575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 137; Significance: 7e-71; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 137; E-Value: 7e-71
Query Start/End: Original strand, 14 - 214
Target Start/End: Original strand, 1328 - 1527
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| |||||||||||||||||||||||||    
T  1328 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcatctctgggtgtaccgcatatatacggcagcttgtatttatcttttaaaaaatat 1427  T
Q  114 aaatagaacattgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccct 213  Q
    |||||||||| |||||||||         || ||||||||||||||||||||||||||||||| | ||||||||||||||||||||||| ||||||||||    
T  1428 aaatagaacagtgctcttttaaaaaaaa-tacgttttgattttatcactgacctcttttcattcccagagccgagcctccgaattctcagggacggccct 1526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 126; Significance: 2e-64; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 126; E-Value: 2e-64
Query Start/End: Original strand, 14 - 215
Target Start/End: Original strand, 106523 - 106724
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||| |||||| |||||||||||||||||||||    
T  106523 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacgacaccttatatttatcttttaaaaaatat 106622  T
Q  114 aaatagaacattgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccct 213  Q
    ||||||||||||| ||||||         || |||||||||||||||||| |||||||||||| | |||||||||||||| |||||| | ||||||||||    
T  106623 aaatagaacattgttcttttaaaaaaaaatacgttttgattttatcactggcctcttttcattcccagagccgagcctccaaattcttagggacggccct 106722  T
Q  214 gt 215  Q
    ||    
T  106723 gt 106724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1590 (Bit Score: 72; Significance: 4e-32; HSPs: 1)
Name: scaffold1590
Description:

Target: scaffold1590; HSP #1
Raw Score: 72; E-Value: 4e-32
Query Start/End: Original strand, 30 - 133
Target Start/End: Complemental strand, 360 - 257
Alignment:
Q  30 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctc 129  Q
    ||||| |||||||||||||||| |||||||| | ||||| ||||||||||||||| |||||||||||||||||||||||||| |||||||||||||| ||    
T  360 ggttcatcatgtatacggtagtgattttcacatttgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatttaaatagaacattgttc 261  T
Q  130 tttt 133  Q
    ||||    
T  260 tttt 257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 68; Significance: 1e-29; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 68; E-Value: 1e-29
Query Start/End: Original strand, 30 - 125
Target Start/End: Complemental strand, 206591 - 206496
Alignment:
Q  30 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacatt 125  Q
    |||||||||||||||||||||| |||||||||  ||||| ||||||||||||||| |||||||||||||||||||| ||||| |||||||||||||    
T  206591 ggttcctcatgtatacggtagtgattttcaccattgggtgtaccgcatatatacgacaccttgtatttatcttttacaaaatttaaatagaacatt 206496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 65; Significance: 6e-28; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 65; E-Value: 6e-28
Query Start/End: Original strand, 30 - 126
Target Start/End: Complemental strand, 173612 - 173516
Alignment:
Q  30 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattg 126  Q
    ||||||||| |||||||||||| ||||| |||| ||||| || ||||||||||||| ||||||||||||||||||||||||| ||||||||||||||    
T  173612 ggttcctcacgtatacggtagtgatttttacctttgggtgtatcgcatatatacggtaccttgtatttatcttttaaaaaatttaaatagaacattg 173516  T

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Target: scaffold0097 (Bit Score: 61; Significance: 2e-25; HSPs: 1)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 61; E-Value: 2e-25
Query Start/End: Original strand, 30 - 126
Target Start/End: Original strand, 38926 - 39022
Alignment:
Q  30 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattg 126  Q
    |||||||||| ||||||||||| |||||||| | || || || |||||||||||| |||||||||||||||||||||||||| ||||||||||||||    
T  38926 ggttcctcatatatacggtagtgattttcacatttgtgtgtatcgcatatatacgacaccttgtatttatcttttaaaaaatttaaatagaacattg 39022  T

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Target: scaffold0007 (Bit Score: 59; Significance: 2e-24; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 31 - 133
Target Start/End: Complemental strand, 230960 - 230858
Alignment:
Q  31 gttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctct 130  Q
    |||||||||||||| |||||| |||||||||| |||||||| |||||||||||  ||||||  ||||||||||||| |||| |||||||||||||| |||    
T  230960 gttcctcatgtataaggtagtgattttcacctttgggtatatcgcatatatacaacaccttaaatttatcttttaacaaatttaaatagaacattgttct 230861  T
Q  131 ttt 133  Q
    |||    
T  230860 ttt 230858  T

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Target: scaffold0182 (Bit Score: 57; Significance: 4e-23; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 57; E-Value: 4e-23
Query Start/End: Original strand, 32 - 132
Target Start/End: Complemental strand, 24093 - 23993
Alignment:
Q  32 ttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctctt 131  Q
    ||||| ||| |||||||| | |||||||| | ||||| ||||||||||||||| |||||||||||||||||||||||||| ||||||||| |||| ||||    
T  24093 ttccttatgcatacggtaatgattttcacttttgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatttaaatagaatattgttctt 23994  T
Q  132 t 132  Q
    |    
T  23993 t 23993  T

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Target: scaffold0001 (Bit Score: 56; Significance: 1e-22; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 75 - 214
Target Start/End: Original strand, 183106 - 183244
Alignment:
Q  75 catatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttca 174  Q
    ||||||||||  || |||||||||||||||||||||||||||||||||||  |||||||        | | ||||| |||||||||||| ||||||||||    
T  183106 catatatacgatactttgtatttatcttttaaaaaatataaatagaacatctctcttttaaaaaaaat-acgttttaattttatcactggcctcttttca 183204  T
Q  175 tttcaagagccgagcctccgaattctcatggacggccctg 214  Q
    || | ||||||||||||| ||||| ||| |||||||||||    
T  183205 ttcccagagccgagcctctgaattttcagggacggccctg 183244  T

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Target: scaffold0001; HSP #2
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 14 - 79
Target Start/End: Original strand, 181904 - 181969
Alignment:
Q  14 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatat 79  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||| | ||||||||||    
T  181904 tttggtgttagatgggggttcctcatgtatacggtagtcattttcacctctggatgtaccgcatat 181969  T

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Target: scaffold1320 (Bit Score: 52; Significance: 4e-20; HSPs: 1)
Name: scaffold1320
Description:

Target: scaffold1320; HSP #1
Raw Score: 52; E-Value: 4e-20
Query Start/End: Original strand, 30 - 125
Target Start/End: Original strand, 1355 - 1450
Alignment:
Q  30 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacatt 125  Q
    ||||||||||||||||| |||| |||||||| | ||||| ||  |||||||||| ||||||| ||||||||||||||||| | |||||||||||||    
T  1355 ggttcctcatgtatacgatagtgattttcacatttgggtgtatagcatatatacagcaccttatatttatcttttaaaaattttaaatagaacatt 1450  T

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Target: scaffold0022 (Bit Score: 47; Significance: 3e-17; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 30 - 133
Target Start/End: Original strand, 40086 - 40191
Alignment:
Q  30 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaata--taaatagaacattgc 127  Q
    |||| |||||||||||| | || ||||||||||  |||| |||  |||| ||||||||||||||||||||||||||||||| |  ||||||||||||||     
T  40086 ggttgctcatgtatacgattgtgattttcaccttagggtgtacaacataaatacggcaccttgtatttatcttttaaaaaaaaattaaatagaacattgt 40185  T
Q  128 tctttt 133  Q
    ||||||    
T  40186 tctttt 40191  T

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Target: scaffold0022; HSP #2
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 30 - 133
Target Start/End: Original strand, 138146 - 138251
Alignment:
Q  30 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaata--taaatagaacattgc 127  Q
    |||| |||||||||||| | || ||||||||||  |||| |||  |||| ||||||||||||||||||||||||||||||| |  ||||||||||||||     
T  138146 ggttgctcatgtatacgattgtgattttcaccttagggtgtacaacataaatacggcaccttgtatttatcttttaaaaaaaaattaaatagaacattgt 138245  T
Q  128 tctttt 133  Q
    ||||||    
T  138246 tctttt 138251  T

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Target: scaffold0227 (Bit Score: 38; Significance: 0.000000000008; HSPs: 2)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 38; E-Value: 0.000000000008
Query Start/End: Original strand, 87 - 132
Target Start/End: Original strand, 16123 - 16168
Alignment:
Q  87 accttgtatttatcttttaaaaaatataaatagaacattgctcttt 132  Q
    ||||||||||||||||||||||||| ||||||||||||| ||||||    
T  16123 accttgtatttatcttttaaaaaatttaaatagaacatttctcttt 16168  T

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Target: scaffold0227; HSP #2
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 30 - 97
Target Start/End: Original strand, 16028 - 16095
Alignment:
Q  30 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtattt 97  Q
    |||| ||||||||||||||||| ||||||| || ||| | ||||||||| ||||| || |||||||||    
T  16028 ggtttctcatgtatacggtagtgattttcatctttggatgtaccgcatacatacgacatcttgtattt 16095  T

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Target: scaffold0003 (Bit Score: 34; Significance: 0.000000002; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 53 - 106
Target Start/End: Complemental strand, 351413 - 351360
Alignment:
Q  53 attttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaa 106  Q
    |||||||||| ||||| |||  |||||||||| |||||||||||||||||||||    
T  351413 attttcacctttgggtgtacaacatatatacgacaccttgtatttatcttttaa 351360  T

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