View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3151_2D_low_86 (Length: 228)

Name: NF3151_2D_low_86
Description: NF3151_2D
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3151_2D_low_86
NF3151_2D_low_86
[»] chr4 (42 HSPs)
chr4 (20-228)||(631334-631541)
chr4 (20-226)||(17048690-17048895)
chr4 (20-161)||(20160452-20160593)
chr4 (20-161)||(20157776-20157917)
chr4 (20-161)||(20163230-20163371)
chr4 (20-155)||(14954773-14954908)
chr4 (20-156)||(10712244-10712380)
chr4 (20-156)||(10926014-10926150)
chr4 (20-161)||(15224426-15224567)
chr4 (21-155)||(5757512-5757647)
chr4 (21-155)||(9555919-9556054)
chr4 (21-155)||(12487074-12487209)
chr4 (21-155)||(14758009-14758144)
chr4 (21-155)||(33741769-33741904)
chr4 (21-155)||(4561907-4562042)
chr4 (20-156)||(37018300-37018436)
chr4 (20-96)||(3484804-3484880)
chr4 (21-96)||(17809723-17809798)
chr4 (69-155)||(25689292-25689378)
chr4 (20-106)||(14548469-14548555)
chr4 (20-156)||(35812632-35812776)
chr4 (20-74)||(15042323-15042377)
chr4 (20-74)||(15112047-15112101)
chr4 (20-74)||(25090443-25090497)
chr4 (20-96)||(13592535-13592611)
chr4 (21-96)||(16997294-16997369)
chr4 (76-155)||(27533400-27533479)
chr4 (22-65)||(27533457-27533500)
chr4 (20-65)||(25689349-25689394)
chr4 (36-74)||(3484793-3484831)
chr4 (20-73)||(42874589-42874642)
chr4 (108-155)||(17807517-17807564)
chr4 (36-74)||(13592584-13592622)
chr4 (190-224)||(33185518-33185552)
chr4 (191-224)||(13592740-13592773)
chr4 (191-224)||(15042429-15042462)
chr4 (191-224)||(15111962-15111995)
chr4 (191-224)||(16997197-16997230)
chr4 (191-224)||(25090357-25090390)
chr4 (186-226)||(10712193-10712233)
chr4 (186-226)||(10925963-10926003)
chr4 (20-76)||(14650409-14650465)
[»] chr3 (62 HSPs)
chr3 (20-228)||(16795829-16796036)
chr3 (20-170)||(12852891-12853041)
chr3 (20-161)||(14665037-14665178)
chr3 (20-161)||(14668193-14668334)
chr3 (20-161)||(15464486-15464627)
chr3 (23-161)||(12339088-12339225)
chr3 (20-161)||(16750922-16751063)
chr3 (20-155)||(15964337-15964472)
chr3 (20-155)||(15968261-15968396)
chr3 (20-155)||(15972185-15972320)
chr3 (20-155)||(37440218-37440353)
chr3 (20-161)||(8489768-8489906)
chr3 (20-161)||(19774954-19775095)
chr3 (21-155)||(11069460-11069595)
chr3 (21-155)||(14498717-14498852)
chr3 (21-155)||(22321056-22321191)
chr3 (21-155)||(22336111-22336246)
chr3 (21-155)||(27410226-27410361)
chr3 (21-155)||(28949114-28949249)
chr3 (21-155)||(55022257-55022392)
chr3 (20-161)||(4589494-4589635)
chr3 (25-155)||(4107985-4108116)
chr3 (25-155)||(4111837-4111968)
chr3 (21-155)||(7109088-7109223)
chr3 (21-155)||(7113023-7113158)
chr3 (21-155)||(15616766-15616901)
chr3 (20-161)||(17317709-17317850)
chr3 (21-155)||(11166111-11166246)
chr3 (20-96)||(5222774-5222850)
chr3 (20-161)||(14670449-14670598)
chr3 (20-161)||(14681971-14682120)
chr3 (20-91)||(46821903-46821974)
chr3 (20-96)||(18700869-18700945)
chr3 (20-156)||(10543014-10543158)
chr3 (24-74)||(13543678-13543728)
chr3 (23-96)||(2842664-2842737)
chr3 (20-74)||(35353360-35353414)
chr3 (20-96)||(14441077-14441153)
chr3 (20-72)||(42353679-42353731)
chr3 (20-67)||(12120173-12120220)
chr3 (36-166)||(14440973-14441104)
chr3 (20-67)||(38962291-38962338)
chr3 (20-74)||(10562478-10562532)
chr3 (20-73)||(5214723-5214776)
chr3 (36-97)||(13520978-13521039)
chr3 (76-155)||(30065372-30065452)
chr3 (20-96)||(43890179-43890255)
chr3 (29-74)||(19884816-19884861)
chr3 (20-65)||(44269408-44269453)
chr3 (20-63)||(30065432-30065475)
chr3 (119-155)||(5220536-5220572)
chr3 (36-88)||(15565319-15565371)
chr3 (190-224)||(5214582-5214616)
chr3 (186-224)||(14670382-14670420)
chr3 (36-74)||(15565300-15565338)
chr3 (36-74)||(18700918-18700956)
chr3 (191-224)||(2842801-2842834)
chr3 (191-224)||(5214614-5214647)
chr3 (191-224)||(31414905-31414938)
chr3 (191-224)||(35353274-35353307)
chr3 (191-224)||(44269340-44269373)
chr3 (57-113)||(14067289-14067345)
[»] scaffold0165 (2 HSPs)
scaffold0165 (20-228)||(3049-3256)
scaffold0165 (20-228)||(7112-7319)
[»] scaffold0124 (1 HSPs)
scaffold0124 (20-224)||(25177-25379)
[»] chr7 (49 HSPs)
chr7 (20-222)||(18301625-18301826)
chr7 (20-155)||(20487186-20487321)
chr7 (21-161)||(13919077-13919217)
chr7 (20-161)||(12705240-12705381)
chr7 (20-164)||(25927822-25927968)
chr7 (20-155)||(45170612-45170747)
chr7 (20-161)||(2530735-2530876)
chr7 (20-161)||(2832778-2832919)
chr7 (20-161)||(15083555-15083696)
chr7 (21-161)||(1859406-1859546)
chr7 (20-161)||(39721625-39721766)
chr7 (20-161)||(18425044-18425185)
chr7 (20-161)||(26291756-26291897)
chr7 (21-155)||(71349-71484)
chr7 (21-155)||(75458-75593)
chr7 (21-155)||(16907793-16907928)
chr7 (21-155)||(18282755-18282890)
chr7 (21-155)||(32498-32633)
chr7 (21-155)||(12718057-12718192)
chr7 (21-155)||(12722968-12723103)
chr7 (21-155)||(16113630-16113765)
chr7 (21-155)||(16116783-16116918)
chr7 (21-155)||(18278792-18278927)
chr7 (20-96)||(24274799-24274875)
chr7 (76-161)||(7519677-7519762)
chr7 (20-156)||(16585087-16585231)
chr7 (20-95)||(16579257-16579332)
chr7 (20-95)||(16586330-16586405)
chr7 (24-96)||(14257924-14257996)
chr7 (20-80)||(16461500-16461560)
chr7 (20-96)||(20585203-20585279)
chr7 (20-81)||(15605873-15605934)
chr7 (100-155)||(12714353-12714408)
chr7 (36-156)||(14257823-14257951)
chr7 (20-67)||(15082324-15082370)
chr7 (20-74)||(14183819-14183873)
chr7 (36-74)||(14933118-14933156)
chr7 (36-74)||(15356553-15356591)
chr7 (36-74)||(15360667-15360705)
chr7 (36-74)||(24274788-24274826)
chr7 (20-74)||(32300804-32300858)
chr7 (20-73)||(12466473-12466526)
chr7 (99-156)||(32300747-32300804)
chr7 (36-74)||(20585192-20585230)
chr7 (191-224)||(14933278-14933311)
chr7 (191-224)||(15356713-15356746)
chr7 (191-224)||(15360827-15360860)
chr7 (191-224)||(15360871-15360904)
chr7 (191-224)||(38479733-38479766)
[»] scaffold0484 (1 HSPs)
scaffold0484 (20-228)||(178-385)
[»] chr1 (29 HSPs)
chr1 (20-224)||(48602804-48603006)
chr1 (20-224)||(22131461-22131663)
chr1 (20-161)||(41781879-41782020)
chr1 (20-160)||(41388600-41388740)
chr1 (20-155)||(1925735-1925870)
chr1 (20-155)||(20924749-20924884)
chr1 (20-153)||(33796911-33797044)
chr1 (20-161)||(39244500-39244641)
chr1 (20-161)||(39248055-39248196)
chr1 (21-156)||(16376040-16376176)
chr1 (21-155)||(1010112-1010247)
chr1 (21-155)||(52638930-52639065)
chr1 (20-161)||(20229588-20229729)
chr1 (20-161)||(21406740-21406881)
chr1 (24-167)||(23967332-23967483)
chr1 (20-96)||(42911818-42911894)
chr1 (20-96)||(14238695-14238775)
chr1 (20-74)||(19675542-19675596)
chr1 (26-96)||(48519948-48520018)
chr1 (20-74)||(20241618-20241672)
chr1 (36-74)||(14238748-14238786)
chr1 (36-74)||(42911807-42911845)
chr1 (186-224)||(48519682-48519720)
chr1 (190-226)||(4597165-4597201)
chr1 (36-96)||(48519915-48519975)
chr1 (190-224)||(48519786-48519820)
chr1 (191-224)||(42911721-42911754)
chr1 (191-224)||(48519818-48519851)
chr1 (191-224)||(51274834-51274867)
[»] scaffold0142 (1 HSPs)
scaffold0142 (20-224)||(8171-8373)
[»] chr8 (26 HSPs)
chr8 (20-224)||(44385227-44385430)
chr8 (20-161)||(21828620-21828761)
chr8 (20-156)||(18863251-18863387)
chr8 (20-155)||(30940683-30940818)
chr8 (20-161)||(23913655-23913796)
chr8 (20-161)||(21386717-21386858)
chr8 (20-161)||(14398429-14398568)
chr8 (20-161)||(21410309-21410450)
chr8 (20-161)||(21804801-21804942)
chr8 (21-155)||(21973163-21973298)
chr8 (21-155)||(21977254-21977389)
chr8 (21-155)||(22111320-22111455)
chr8 (21-155)||(43251200-43251335)
chr8 (20-142)||(16413760-16413882)
chr8 (20-96)||(32121453-32121529)
chr8 (20-96)||(42819107-42819183)
chr8 (36-166)||(5760107-5760237)
chr8 (26-96)||(18833091-18833161)
chr8 (36-74)||(32121442-32121480)
chr8 (20-76)||(19929978-19930034)
chr8 (177-224)||(18832974-18833020)
chr8 (36-74)||(37515200-37515238)
chr8 (36-74)||(42819156-42819194)
chr8 (191-224)||(42819247-42819280)
chr8 (186-226)||(21828790-21828830)
chr8 (186-226)||(30940924-30940964)
[»] scaffold0575 (1 HSPs)
scaffold0575 (20-161)||(6472-6613)
[»] scaffold0031 (1 HSPs)
scaffold0031 (20-161)||(36692-36833)
[»] chr6 (51 HSPs)
chr6 (20-161)||(22074567-22074708)
chr6 (20-161)||(23414289-23414430)
chr6 (20-146)||(2076871-2076997)
chr6 (20-161)||(1643894-1644035)
chr6 (20-161)||(31478565-31478706)
chr6 (21-155)||(11566251-11566386)
chr6 (21-155)||(12619424-12619559)
chr6 (21-155)||(22862335-22862470)
chr6 (21-155)||(23394457-23394592)
chr6 (21-155)||(8243222-8243357)
chr6 (20-155)||(14471603-14471738)
chr6 (21-155)||(23989309-23989444)
chr6 (20-161)||(16623738-16623879)
chr6 (36-155)||(16759626-16759746)
chr6 (21-155)||(19869978-19870114)
chr6 (62-156)||(27556065-27556159)
chr6 (69-155)||(22948506-22948592)
chr6 (69-155)||(22952462-22952548)
chr6 (69-155)||(23870950-23871036)
chr6 (69-155)||(23874906-23874992)
chr6 (20-74)||(34963069-34963123)
chr6 (20-149)||(22805370-22805507)
chr6 (20-156)||(19774060-19774204)
chr6 (20-87)||(23538235-23538302)
chr6 (20-74)||(23992126-23992180)
chr6 (20-73)||(17105354-17105407)
chr6 (24-96)||(17742851-17742923)
chr6 (20-96)||(19656621-19656697)
chr6 (20-79)||(27126606-27126665)
chr6 (20-95)||(15705936-15706011)
chr6 (76-155)||(18918013-18918092)
chr6 (31-88)||(16759727-16759784)
chr6 (21-70)||(27416508-27416557)
chr6 (20-74)||(7825435-7825489)
chr6 (20-65)||(22948563-22948608)
chr6 (20-65)||(22952519-22952564)
chr6 (20-65)||(23871007-23871052)
chr6 (20-65)||(23874963-23875008)
chr6 (36-161)||(19656762-19656888)
chr6 (36-95)||(15705985-15706044)
chr6 (172-225)||(17742613-17742665)
chr6 (53-106)||(19656746-19656799)
chr6 (36-96)||(17742818-17742878)
chr6 (20-59)||(18917990-18918029)
chr6 (190-228)||(17105122-17105160)
chr6 (36-74)||(17742807-17742845)
chr6 (36-74)||(19656695-19656733)
chr6 (36-73)||(23538216-23538253)
chr6 (20-49)||(27556159-27556188)
chr6 (36-96)||(20182380-20182440)
chr6 (36-96)||(22153551-22153611)
[»] chr5 (19 HSPs)
chr5 (20-161)||(11230505-11230646)
chr5 (20-153)||(18355609-18355742)
chr5 (20-161)||(11220107-11220248)
chr5 (20-161)||(11224693-11224834)
chr5 (20-161)||(11228516-11228657)
chr5 (21-155)||(40724198-40724332)
chr5 (21-156)||(20295235-20295371)
chr5 (20-161)||(10752576-10752715)
chr5 (20-161)||(15237416-15237556)
chr5 (20-141)||(11226546-11226667)
chr5 (69-169)||(22108009-22108109)
chr5 (69-161)||(20911531-20911623)
chr5 (69-161)||(24767898-24767990)
chr5 (69-155)||(19473315-19473401)
chr5 (20-73)||(22107993-22108046)
chr5 (20-65)||(19473299-19473344)
chr5 (20-64)||(20911515-20911559)
chr5 (20-74)||(33896117-33896171)
chr5 (25-65)||(24767887-24767927)
[»] chr2 (28 HSPs)
chr2 (20-161)||(1282772-1282913)
chr2 (20-161)||(9784394-9784535)
chr2 (20-161)||(31344522-31344662)
chr2 (20-155)||(41531586-41531721)
chr2 (20-155)||(30345597-30345732)
chr2 (21-155)||(24629061-24629196)
chr2 (21-155)||(27380014-27380149)
chr2 (21-155)||(27384060-27384195)
chr2 (21-155)||(27601181-27601316)
chr2 (21-155)||(10102235-10102370)
chr2 (21-155)||(24648744-24648879)
chr2 (20-96)||(32215396-32215472)
chr2 (20-113)||(12902097-12902190)
chr2 (20-96)||(17306255-17306331)
chr2 (20-67)||(38967084-38967131)
chr2 (20-74)||(28653710-28653764)
chr2 (21-74)||(24514976-24515029)
chr2 (20-67)||(24367446-24367493)
chr2 (26-96)||(36838972-36839042)
chr2 (36-74)||(32215445-32215483)
chr2 (36-74)||(17306244-17306282)
chr2 (186-219)||(357661-357694)
chr2 (191-224)||(7672749-7672782)
chr2 (191-224)||(17306158-17306191)
chr2 (191-224)||(24866069-24866102)
chr2 (191-224)||(28653817-28653850)
chr2 (191-224)||(36838875-36838908)
chr2 (186-226)||(1282703-1282743)
[»] scaffold0141 (2 HSPs)
scaffold0141 (20-155)||(14693-14828)
scaffold0141 (186-226)||(14934-14974)
[»] scaffold0601 (2 HSPs)
scaffold0601 (40-182)||(8090-8231)
scaffold0601 (20-96)||(8037-8113)
[»] scaffold0016 (1 HSPs)
scaffold0016 (20-153)||(208194-208327)
[»] scaffold0012 (1 HSPs)
scaffold0012 (20-153)||(189983-190116)
[»] scaffold1852 (1 HSPs)
scaffold1852 (20-156)||(97-234)
[»] scaffold0200 (1 HSPs)
scaffold0200 (20-161)||(11354-11495)
[»] scaffold0109 (3 HSPs)
scaffold0109 (20-161)||(36570-36711)
scaffold0109 (24-96)||(1063-1135)
scaffold0109 (36-74)||(1108-1146)
[»] scaffold0013 (1 HSPs)
scaffold0013 (20-156)||(73900-74036)
[»] scaffold0372 (1 HSPs)
scaffold0372 (21-155)||(5681-5816)
[»] scaffold0349 (1 HSPs)
scaffold0349 (21-155)||(11811-11946)
[»] scaffold0157 (1 HSPs)
scaffold0157 (21-155)||(33268-33403)
[»] scaffold0061 (3 HSPs)
scaffold0061 (21-155)||(67883-68018)
scaffold0061 (20-96)||(19613-19689)
scaffold0061 (37-74)||(19663-19700)
[»] scaffold0293 (1 HSPs)
scaffold0293 (20-164)||(20785-20933)
[»] scaffold0029 (3 HSPs)
scaffold0029 (20-155)||(66105-66240)
scaffold0029 (20-155)||(62189-62324)
scaffold0029 (21-161)||(79925-80066)
[»] scaffold0028 (1 HSPs)
scaffold0028 (21-155)||(59301-59436)
[»] scaffold0486 (2 HSPs)
scaffold0486 (20-161)||(9235-9377)
scaffold0486 (20-79)||(8201-8260)
[»] scaffold0525 (1 HSPs)
scaffold0525 (20-113)||(4450-4543)
[»] scaffold0494 (2 HSPs)
scaffold0494 (20-96)||(12705-12781)
scaffold0494 (36-74)||(12754-12792)
[»] scaffold0278 (2 HSPs)
scaffold0278 (36-165)||(7137-7274)
scaffold0278 (23-96)||(7247-7317)
[»] scaffold0205 (3 HSPs)
scaffold0205 (20-96)||(29261-29337)
scaffold0205 (36-74)||(29250-29288)
scaffold0205 (191-224)||(29075-29108)
[»] scaffold0023 (2 HSPs)
scaffold0023 (20-96)||(18059-18135)
scaffold0023 (36-74)||(18108-18146)
[»] scaffold0546 (2 HSPs)
scaffold0546 (24-96)||(10666-10738)
scaffold0546 (36-74)||(10655-10693)
[»] scaffold0166 (2 HSPs)
scaffold0166 (69-161)||(10395-10487)
scaffold0166 (25-65)||(10384-10424)
[»] scaffold0019 (1 HSPs)
scaffold0019 (20-74)||(28798-28852)
[»] scaffold0207 (6 HSPs)
scaffold0207 (23-96)||(15544-15617)
scaffold0207 (36-88)||(15689-15741)
scaffold0207 (36-96)||(15590-15650)
scaffold0207 (36-96)||(15656-15716)
scaffold0207 (36-96)||(15623-15683)
scaffold0207 (36-88)||(15722-15774)
[»] scaffold1662 (2 HSPs)
scaffold1662 (20-96)||(629-705)
scaffold1662 (36-74)||(678-716)
[»] scaffold0292 (2 HSPs)
scaffold0292 (36-156)||(4329-4449)
scaffold0292 (20-96)||(4422-4498)
[»] scaffold0203 (2 HSPs)
scaffold0203 (20-96)||(19270-19346)
scaffold0203 (36-74)||(19319-19357)
[»] scaffold0452 (1 HSPs)
scaffold0452 (20-95)||(13913-13988)
[»] scaffold0032 (1 HSPs)
scaffold0032 (20-96)||(63450-63526)
[»] scaffold0301 (1 HSPs)
scaffold0301 (20-74)||(10706-10760)
[»] scaffold0111 (5 HSPs)
scaffold0111 (20-96)||(20010-20086)
scaffold0111 (24-65)||(7093-7134)
scaffold0111 (24-65)||(14212-14253)
scaffold0111 (36-74)||(20059-20097)
scaffold0111 (191-224)||(20150-20183)
[»] scaffold0058 (2 HSPs)
scaffold0058 (24-96)||(832-904)
scaffold0058 (186-224)||(1016-1054)
[»] scaffold0040 (1 HSPs)
scaffold0040 (20-74)||(102305-102359)
[»] scaffold0034 (1 HSPs)
scaffold0034 (20-74)||(116619-116673)
[»] scaffold0003 (1 HSPs)
scaffold0003 (20-70)||(70804-70854)
[»] scaffold1633 (1 HSPs)
scaffold1633 (23-95)||(37-109)
[»] scaffold0096 (1 HSPs)
scaffold0096 (186-224)||(13269-13307)
[»] scaffold0074 (1 HSPs)
scaffold0074 (100-161)||(51314-51375)
[»] scaffold0299 (1 HSPs)
scaffold0299 (20-60)||(6426-6466)
[»] scaffold0073 (1 HSPs)
scaffold0073 (20-76)||(56610-56666)
[»] scaffold0863 (1 HSPs)
scaffold0863 (191-224)||(637-670)
[»] scaffold0359 (1 HSPs)
scaffold0359 (23-76)||(15154-15207)
[»] scaffold0077 (1 HSPs)
scaffold0077 (51-95)||(20943-20987)
[»] scaffold0005 (1 HSPs)
scaffold0005 (20-76)||(166827-166883)


Alignment Details
Target: chr4 (Bit Score: 169; Significance: 9e-91; HSPs: 42)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 169; E-Value: 9e-91
Query Start/End: Original strand, 20 - 228
Target Start/End: Original strand, 631334 - 631541
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttactgagttgtattctactcatat 119  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||| |    
T  631334 ttgtcgagtcaaagtcattgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttgctgagttgtattctacccatgt 631433  T
Q  120 gttgttaaagaagtacctatgaagattatacgatgttcatgacgttgtcaaagttgcttatgacgattgctatgttgtttatgatattgattctgatgtt 219  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||| ||| || |||||||    
T  631434 gttgttaaagaagtacctatgaagattatacgatgttcatgacgttgtc-aagttgcttatgacgattgctatgttggttatgatgttgtttgtgatgtt 631532  T
Q  220 gttatatga 228  Q
    |||||||||    
T  631533 gttatatga 631541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 159; E-Value: 8e-85
Query Start/End: Original strand, 20 - 226
Target Start/End: Original strand, 17048690 - 17048895
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttactgagttgtattctactcatat 119  Q
    ||||||| |||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||| |||||||||||| ||| ||| |    
T  17048690 ttgtcgattcaaagtcgttgttgatgaattatcatccacgagttgttaagttgttaacgaattatcatctatgagttgctgagttgtattatacccatgt 17048789  T
Q  120 gttgttaaagaagtacctatgaagattatacgatgttcatgacgttgtcaaagttgcttatgacgattgctatgttgtttatgatattgattctgatgtt 219  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||| || |||||||    
T  17048790 gttgttaaagaagtacctatgaagattatacgatgttcatgacgttgtcaaa-ttgcttatgacgattgctatgttgtttatggtattgtttgtgatgtt 17048888  T
Q  220 gttatat 226  Q
    |||||||    
T  17048889 gttatat 17048895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 20 - 161
Target Start/End: Original strand, 20160452 - 20160593
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttactgagttgtattctactcatat 119  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||   ||||||| |||||| ||| |    
T  20160452 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttgatgaattatcatctatgaattgtcgagttgtcttctacccatgt 20160551  T
Q  120 gttgttaaagaagtacctatgaagattatacgatgttcatga 161  Q
    ||||||||||||||||||||||||||||||||||||| ||||    
T  20160552 gttgttaaagaagtacctatgaagattatacgatgtttatga 20160593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 20 - 161
Target Start/End: Original strand, 20157776 - 20157917
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttactgagttgtattctactcatat 119  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||   ||||||| |||||| ||| |    
T  20157776 ttgtcgagtcaaactcgttgttgatgaattatcatccatgagttgttaagttgttgatgaattatcatctatgagttgtcgagttgtcttctacccatgt 20157875  T
Q  120 gttgttaaagaagtacctatgaagattatacgatgttcatga 161  Q
    ||||||||| ||||||||||||||||||||||||||| ||||    
T  20157876 gttgttaaataagtacctatgaagattatacgatgtttatga 20157917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 20 - 161
Target Start/End: Original strand, 20163230 - 20163371
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttactgagttgtattctactcatat 119  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||   | ||||| ||||||  || |    
T  20163230 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttgatgaattatcatctatgagttgtcgggttgtcttctacctatgt 20163329  T
Q  120 gttgttaaagaagtacctatgaagattatacgatgttcatga 161  Q
    ||||||||||||||||||||||||||||||||||||| ||||    
T  20163330 gttgttaaagaagtacctatgaagattatacgatgtttatga 20163371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 20 - 155
Target Start/End: Original strand, 14954773 - 14954908
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttactgagttgtattctactcatat 119  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||| ||||   ||||||| |||||| ||| |    
T  14954773 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatctataagttgtcgagttgtcttctacccatgt 14954872  T
Q  120 gttgttaaagaagtacctatgaagattatacgatgt 155  Q
    ||||||||||||||||||| ||||||||||||||||    
T  14954873 gttgttaaagaagtacctacgaagattatacgatgt 14954908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 20 - 156
Target Start/End: Complemental strand, 10712380 - 10712244
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttactgagttgtattctactcatat 119  Q
    |||||||||||| ||||||||||||||||||||||||| |||||||||||||||  |||||||||||||||||||||   ||||||| || ||| ||| |    
T  10712380 ttgtcgagtcaaggtcgttgttgatgaattatcatccacgagttgttaagttgtcgatgaattatcatctatgagttgtcgagttgtcttttacccatgt 10712281  T
Q  120 gttgttaaagaagtacctatgaagattatacgatgtt 156  Q
    |||||||||||||||||||||||||||||||||||||    
T  10712280 gttgttaaagaagtacctatgaagattatacgatgtt 10712244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 20 - 156
Target Start/End: Complemental strand, 10926150 - 10926014
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttactgagttgtattctactcatat 119  Q
    |||||||||||| ||||||||||||||||||||||||| |||||||||||||||  |||||||||||||||||||||   ||||||| || ||| ||| |    
T  10926150 ttgtcgagtcaaggtcgttgttgatgaattatcatccacgagttgttaagttgtcgatgaattatcatctatgagttgtcgagttgtcttttacccatgt 10926051  T
Q  120 gttgttaaagaagtacctatgaagattatacgatgtt 156  Q
    |||||||||||||||||||||||||||||||||||||    
T  10926050 gttgttaaagaagtacctatgaagattatacgatgtt 10926014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 20 - 161
Target Start/End: Complemental strand, 15224567 - 15224426
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttactgagttgtattctactcatat 119  Q
    |||||||||||| |||| ||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||   ||||||| ||||||  || |    
T  15224567 ttgtcgagtcaaggtcgctgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatctatgagttgtcgagttgtcttctacctatgt 15224468  T
Q  120 gttgttaaagaagtacctatgaagattatacgatgttcatga 161  Q
    ||||||||||||||||||| ||||||||||||||||| ||||    
T  15224467 gttgttaaagaagtacctacgaagattatacgatgtttatga 15224426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 21 - 155
Target Start/End: Original strand, 5757512 - 5757647
Alignment:
Q  21 tgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttact-gagttgtattctactcatat 119  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||  ||||||||||||| |||||||  | ||||||| |||||| ||| |    
T  5757512 tgtcgagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatccatgagtttgtcgagttgtgttctacccatgt 5757611  T
Q  120 gttgttaaagaagtacctatgaagattatacgatgt 155  Q
    ||||||||||||||||||| ||||||||||||||||    
T  5757612 gttgttaaagaagtacctacgaagattatacgatgt 5757647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 21 - 155
Target Start/End: Complemental strand, 9556054 - 9555919
Alignment:
Q  21 tgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttact-gagttgtattctactcatat 119  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||  ||||||||||||| |||||||  | ||||||| |||||| ||| |    
T  9556054 tgtcgagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatccatgagtttgtcgagttgtgttctacccatgt 9555955  T
Q  120 gttgttaaagaagtacctatgaagattatacgatgt 155  Q
    ||||||||||||||||||| ||||||||||||||||    
T  9555954 gttgttaaagaagtacctacgaagattatacgatgt 9555919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 21 - 155
Target Start/End: Complemental strand, 12487209 - 12487074
Alignment:
Q  21 tgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttact-gagttgtattctactcatat 119  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||  ||||||||||||| |||||||  | ||||||| |||||| ||| |    
T  12487209 tgtcgagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatccatgagtttgtcgagttgtgttctacccatgt 12487110  T
Q  120 gttgttaaagaagtacctatgaagattatacgatgt 155  Q
    ||||||||||||||||||| ||||||||||||||||    
T  12487109 gttgttaaagaagtacctacgaagattatacgatgt 12487074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 21 - 155
Target Start/End: Original strand, 14758009 - 14758144
Alignment:
Q  21 tgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttact-gagttgtattctactcatat 119  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||  ||||||||||||| |||||||  | ||||||| |||||| ||| |    
T  14758009 tgtcgagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatccatgagtttgtcgagttgtgttctacccatgt 14758108  T
Q  120 gttgttaaagaagtacctatgaagattatacgatgt 155  Q
    ||||||||||||||||||| ||||||||||||||||    
T  14758109 gttgttaaagaagtacctacgaagattatacgatgt 14758144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 21 - 155
Target Start/End: Complemental strand, 33741904 - 33741769
Alignment:
Q  21 tgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttact-gagttgtattctactcatat 119  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||  ||||||||||||| |||||||  | ||||||| |||||| ||| |    
T  33741904 tgtcgagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatccatgagtttgtcgagttgtgttctacccatgt 33741805  T
Q  120 gttgttaaagaagtacctatgaagattatacgatgt 155  Q
    ||||||||||||||||||| ||||||||||||||||    
T  33741804 gttgttaaagaagtacctacgaagattatacgatgt 33741769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 21 - 155
Target Start/End: Original strand, 4561907 - 4562042
Alignment:
Q  21 tgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttact-gagttgtattctactcatat 119  Q
    ||||||||||| ||||||||||||||||||||||||||||||||| |||||||  ||||||||||||| |||||||  | ||||||| |||||| ||| |    
T  4561907 tgtcgagtcaaggtcgttgttgatgaattatcatccatgagttgtcaagttgtcgatgaattatcatccatgagtttgtcgagttgtgttctacccatgt 4562006  T
Q  120 gttgttaaagaagtacctatgaagattatacgatgt 155  Q
    ||||||||||||||||||| || |||||||||||||    
T  4562007 gttgttaaagaagtacctacgaggattatacgatgt 4562042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 20 - 156
Target Start/End: Complemental strand, 37018436 - 37018300
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttactgagttgtattctactcatat 119  Q
    ||||||||||||||||||||||||||| || |||||||||||||||||||||||| |||| || ||||| || ||||  |||||||| |||||  ||  |    
T  37018436 ttgtcgagtcaaagtcgttgttgatgagttgtcatccatgagttgttaagttgttgatgagttgtcatccataagttgttgagttgtcttctatccacgt 37018337  T
Q  120 gttgttaaagaagtacctatgaagattatacgatgtt 156  Q
    |||||| | ||||||| ||||||||||||| ||||||    
T  37018336 gttgttcatgaagtacttatgaagattatatgatgtt 37018300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 20 - 96
Target Start/End: Complemental strand, 3484880 - 3484804
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagtt 96  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||  |||||||||||| |||||||    
T  3484880 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagctgttaagttgttgttgaattatcatccatgagtt 3484804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 21 - 96
Target Start/End: Complemental strand, 17809798 - 17809723
Alignment:
Q  21 tgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagtt 96  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||  ||||||||||||| |||||||    
T  17809798 tgtcgagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatccatgagtt 17809723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 69 - 155
Target Start/End: Complemental strand, 25689378 - 25689292
Alignment:
Q  69 gttgttaatgaattatcatctatgagttactgagttgtattctactcatatgttgttaaagaagtacctatgaagattatacgatgt 155  Q
    |||||| |||||||||||||||||||||   ||||||| |||||| ||| |||||||||||||||||||| ||||||||||||||||    
T  25689378 gttgttgatgaattatcatctatgagttgtcgagttgtcttctacccatgtgttgttaaagaagtacctacgaagattatacgatgt 25689292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 20 - 106
Target Start/End: Complemental strand, 14548555 - 14548469
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttactgagttgt 106  Q
    ||||||||||||||||||||||||||| || |||||| ||||||||||||||||| |||| || ||||| ||||||| || ||||||    
T  14548555 ttgtcgagtcaaagtcgttgttgatgagttgtcatccttgagttgttaagttgttgatgagttgtcatccatgagttgctaagttgt 14548469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 20 - 156
Target Start/End: Original strand, 35812632 - 35812776
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatg--------agttactgagttgtattct 111  Q
    ||||||||||||||||||||||||||| |  |||||||||||||||||||||||| |||| || ||||| |||        ||||  |||||||| ||||    
T  35812632 ttgtcgagtcaaagtcgttgttgatgagtcgtcatccatgagttgttaagttgttgatgagttgtcatccatgaattgttaagttgttgagttgtcttct 35812731  T
Q  112 actcatatgttgttaaagaagtacctatgaagattatacgatgtt 156  Q
    |  ||| ||||||||| ||||| | ||||||||||||| ||||||    
T  35812732 atccatgtgttgttaatgaagtgcttatgaagattatatgatgtt 35812776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 20 - 74
Target Start/End: Original strand, 15042323 - 15042377
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgtt 74  Q
    ||||||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  15042323 ttgtcgagtcaaagtcgttgttgatgagttgtcatccatgagttgttaagttgtt 15042377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 20 - 74
Target Start/End: Complemental strand, 15112101 - 15112047
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgtt 74  Q
    ||||||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  15112101 ttgtcgagtcaaagtcgttgttgatgagttgtcatccatgagttgttaagttgtt 15112047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 20 - 74
Target Start/End: Complemental strand, 25090497 - 25090443
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgtt 74  Q
    ||||||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  25090497 ttgtcgagtcaaagtcgttgttgatgagttgtcatccatgagttgttaagttgtt 25090443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 20 - 96
Target Start/End: Original strand, 13592535 - 13592611
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagtt 96  Q
    |||| |||||||||||||||||||||| |  |||||||||||||||||||||||| |||| || ||||| |||||||    
T  13592535 ttgttgagtcaaagtcgttgttgatgagtcgtcatccatgagttgttaagttgttgatgagttgtcatccatgagtt 13592611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 21 - 96
Target Start/End: Complemental strand, 16997369 - 16997294
Alignment:
Q  21 tgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagtt 96  Q
    ||||||||||||||||||||| |||| || |||||||||||||||||||||||| |||| ||  |||| |||||||    
T  16997369 tgtcgagtcaaagtcgttgttaatgagttgtcatccatgagttgttaagttgttgatgagttgacatccatgagtt 16997294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 76 - 155
Target Start/End: Complemental strand, 27533479 - 27533400
Alignment:
Q  76 atgaattatcatctatgagttactgagttgtattctactcatatgttgttaaagaagtacctatgaagattatacgatgt 155  Q
    ||||||||||||| |||||||   ||||||  |||||| ||| |||||||||||||||||||| ||||||||||||||||    
T  27533479 atgaattatcatccatgagttgtcgagttgcgttctacccatgtgttgttaaagaagtacctacgaagattatacgatgt 27533400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 22 - 65
Target Start/End: Complemental strand, 27533500 - 27533457
Alignment:
Q  22 gtcgagtcaaagtcgttgttgatgaattatcatccatgagttgt 65  Q
    ||||||||||||||||||| ||||||||||||||||||||||||    
T  27533500 gtcgagtcaaagtcgttgtcgatgaattatcatccatgagttgt 27533457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 20 - 65
Target Start/End: Complemental strand, 25689394 - 25689349
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgt 65  Q
    |||||||||||| ||||||||||||||||||||||| |||||||||    
T  25689394 ttgtcgagtcaaggtcgttgttgatgaattatcatctatgagttgt 25689349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 36 - 74
Target Start/End: Complemental strand, 3484831 - 3484793
Alignment:
Q  36 gttgttgatgaattatcatccatgagttgttaagttgtt 74  Q
    ||||||| |||||||||||||||||||||||||||||||    
T  3484831 gttgttgttgaattatcatccatgagttgttaagttgtt 3484793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 73
Target Start/End: Complemental strand, 42874642 - 42874589
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgt 73  Q
    ||||||| ||||||||||||||||||| || |||| ||||||||||| ||||||    
T  42874642 ttgtcgaatcaaagtcgttgttgatgagttgtcattcatgagttgttgagttgt 42874589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 108 - 155
Target Start/End: Complemental strand, 17807564 - 17807517
Alignment:
Q  108 ttctactcatatgttgttaaagaagtacctatgaagattatacgatgt 155  Q
    |||||| ||| |||||||||||||||||||| ||||||| ||||||||    
T  17807564 ttctacccatgtgttgttaaagaagtacctacgaagattttacgatgt 17807517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 74
Target Start/End: Original strand, 13592584 - 13592622
Alignment:
Q  36 gttgttgatgaattatcatccatgagttgttaagttgtt 74  Q
    ||||||||||| || ||||||||||||||||||||||||    
T  13592584 gttgttgatgagttgtcatccatgagttgttaagttgtt 13592622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 224
Target Start/End: Complemental strand, 33185552 - 33185518
Alignment:
Q  190 tatgttgtttatgatattgattctgatgttgttat 224  Q
    |||||||||||||||||||||| ||||||||||||    
T  33185552 tatgttgtttatgatattgattatgatgttgttat 33185518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 191 - 224
Target Start/End: Original strand, 13592740 - 13592773
Alignment:
Q  191 atgttgtttatgatattgattctgatgttgttat 224  Q
    ||||||||||||||||||||| ||||||||||||    
T  13592740 atgttgtttatgatattgattatgatgttgttat 13592773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 191 - 224
Target Start/End: Original strand, 15042429 - 15042462
Alignment:
Q  191 atgttgtttatgatattgattctgatgttgttat 224  Q
    ||||||||||||||||||||| ||||||||||||    
T  15042429 atgttgtttatgatattgattatgatgttgttat 15042462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 191 - 224
Target Start/End: Complemental strand, 15111995 - 15111962
Alignment:
Q  191 atgttgtttatgatattgattctgatgttgttat 224  Q
    ||||||||||||||||||||| ||||||||||||    
T  15111995 atgttgtttatgatattgattatgatgttgttat 15111962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 191 - 224
Target Start/End: Complemental strand, 16997230 - 16997197
Alignment:
Q  191 atgttgtttatgatattgattctgatgttgttat 224  Q
    ||||||||||||||||||||| ||||||||||||    
T  16997230 atgttgtttatgatattgattatgatgttgttat 16997197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 191 - 224
Target Start/End: Complemental strand, 25090390 - 25090357
Alignment:
Q  191 atgttgtttatgatattgattctgatgttgttat 224  Q
    ||||||||||||||||||||| ||||||||||||    
T  25090390 atgttgtttatgatattgattatgatgttgttat 25090357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 226
Target Start/End: Complemental strand, 10712233 - 10712193
Alignment:
Q  186 ttgctatgttgtttatgatattgattctgatgttgttatat 226  Q
    ||||||||||||||| |||||||||| |||| |||||||||    
T  10712233 ttgctatgttgtttaagatattgattatgatattgttatat 10712193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 226
Target Start/End: Complemental strand, 10926003 - 10925963
Alignment:
Q  186 ttgctatgttgtttatgatattgattctgatgttgttatat 226  Q
    ||||||||||||||| |||||||||| |||| |||||||||    
T  10926003 ttgctatgttgtttaagatattgattatgatattgttatat 10925963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 76
Target Start/End: Complemental strand, 14650465 - 14650409
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaa 76  Q
    ||||||||||||||||||||| ||| | || | ||||||| ||||| ||||||||||    
T  14650465 ttgtcgagtcaaagtcgttgtcgataagtttttatccatgcgttgtcaagttgttaa 14650409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 169; Significance: 9e-91; HSPs: 62)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 169; E-Value: 9e-91
Query Start/End: Original strand, 20 - 228
Target Start/End: Complemental strand, 16796036 - 16795829
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttactgagttgtattctactcatat 119  Q
    ||||| |||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||| |    
T  16796036 ttgtctagtcgaagtcgttgttgatgaattatcatccatgagttgttaagttattaatgaattatcatctatgagttgctgagttgtattctactcatgt 16795937  T
Q  120 gttgttaaagaagtacctatgaagattatacgatgttcatgacgttgtcaaagttgcttatgacgattgctatgttgtttatgatattgattctgatgtt 219  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||| || |||||||    
T  16795936 gttgttaaagaagtacctatgaagattatacgatgttcatgacgttgtc-aagttgcttatgacgattgctatgttgtttatgatgttgtttgtgatgtt 16795838  T
Q  220 gttatatga 228  Q
    |||||||||    
T  16795837 gttatatga 16795829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 20 - 170
Target Start/End: Original strand, 12852891 - 12853041
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttactgagttgtattctactcatat 119  Q
    |||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| || |||||| |||||| ||| |    
T  12852891 ttgtcgagtcaaagttattgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctttgagtttcttagttgtcttctacccatgt 12852990  T
Q  120 gttgttaaagaagtacctatgaagattatacgatgttcatgacgttgtcaa 170  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  12852991 gttgttaaagaagtacctatgaagattatacgatgttcatgacgtggtcaa 12853041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 20 - 161
Target Start/End: Complemental strand, 14665178 - 14665037
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttactgagttgtattctactcatat 119  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||   ||||||| |||||| ||| |    
T  14665178 ttgtcgagtcaaagtcgttgttgatgaattatcattcatgagttgttaagttgttgatgaattatcatctatgagttgtcgagttgtcttctacccatgt 14665079  T
Q  120 gttgttaaagaagtacctatgaagattatacgatgttcatga 161  Q
    ||||||||||||||||||||||||||||||||||||| ||||    
T  14665078 gttgttaaagaagtacctatgaagattatacgatgtttatga 14665037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 20 - 161
Target Start/End: Complemental strand, 14668334 - 14668193
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttactgagttgtattctactcatat 119  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||   ||||| | |||||| ||| |    
T  14668334 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttgatgaattatcatctatgagttgtcgagttatcttctacccatgt 14668235  T
Q  120 gttgttaaagaagtacctatgaagattatacgatgttcatga 161  Q
    ||||||||||||||||||||||||||||||||||||| ||||    
T  14668234 gttgttaaagaagtacctatgaagattatacgatgtttatga 14668193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 20 - 161
Target Start/End: Complemental strand, 15464627 - 15464486
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttactgagttgtattctactcatat 119  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||   ||||||| |||||| ||| |    
T  15464627 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttgatgaattatcatctacgagttgtcgagttgtcttctacccatgt 15464528  T
Q  120 gttgttaaagaagtacctatgaagattatacgatgttcatga 161  Q
    ||||||||||||||||||||||||||||||||||||| ||||    
T  15464527 gttgttaaagaagtacctatgaagattatacgatgtttatga 15464486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 23 - 161
Target Start/End: Complemental strand, 12339225 - 12339088
Alignment:
Q  23 tcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttactgagttgtattctactcatatgtt 122  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||  |||||||| |||||| ||| ||||    
T  12339225 tcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttgatgaattatcatctatgagttgttgagttgtcttctac-catgtgtt 12339127  T
Q  123 gttaaagaagtacctatgaagattatacgatgttcatga 161  Q
    |||||||||||||||||||||||| ||||||||| ||||    
T  12339126 gttaaagaagtacctatgaagattttacgatgtttatga 12339088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 20 - 161
Target Start/End: Original strand, 16750922 - 16751063
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttactgagttgtattctactcatat 119  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||  | |||||| ||||||  || |    
T  16750922 ttgtcgagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcaatgaattatcatctatgagttgttaagttgtcttctacctatgt 16751021  T
Q  120 gttgttaaagaagtacctatgaagattatacgatgttcatga 161  Q
    ||||||||||||||||||| ||||||||||||||||||||||    
T  16751022 gttgttaaagaagtacctacgaagattatacgatgttcatga 16751063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 20 - 155
Target Start/End: Complemental strand, 15964472 - 15964337
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttactgagttgtattctactcatat 119  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||   ||||||| |||||| ||| |    
T  15964472 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatctatgagttgtcgagttgtcttctacccatgt 15964373  T
Q  120 gttgttaaagaagtacctatgaagattatacgatgt 155  Q
    ||||||||||||||||||| ||||||||||||||||    
T  15964372 gttgttaaagaagtacctacgaagattatacgatgt 15964337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 20 - 155
Target Start/End: Complemental strand, 15968396 - 15968261
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttactgagttgtattctactcatat 119  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||   ||||||| |||||| ||| |    
T  15968396 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatctatgagttgtcgagttgtcttctacccatgt 15968297  T
Q  120 gttgttaaagaagtacctatgaagattatacgatgt 155  Q
    ||||||||||||||||||| ||||||||||||||||    
T  15968296 gttgttaaagaagtacctacgaagattatacgatgt 15968261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 20 - 155
Target Start/End: Complemental strand, 15972320 - 15972185
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttactgagttgtattctactcatat 119  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||   ||||||| |||||| ||| |    
T  15972320 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatctatgagttgtcgagttgtcttctacccatgt 15972221  T
Q  120 gttgttaaagaagtacctatgaagattatacgatgt 155  Q
    ||||||||||||||||||| ||||||||||||||||    
T  15972220 gttgttaaagaagtacctacgaagattatacgatgt 15972185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 20 - 155
Target Start/End: Original strand, 37440218 - 37440353
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttactgagttgtattctactcatat 119  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||   ||||||| |||||| ||| |    
T  37440218 ttgtcgagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatctatgagttgtcgagttgtcttctacccatgt 37440317  T
Q  120 gttgttaaagaagtacctatgaagattatacgatgt 155  Q
    ||||||||||||||||||||||||||||||||||||    
T  37440318 gttgttaaagaagtacctatgaagattatacgatgt 37440353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 20 - 161
Target Start/End: Original strand, 8489768 - 8489906
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttactgagttgtattctactcatat 119  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||   |||||||||||||||||||||   ||||||| |||||| ||| |    
T  8489768 ttgtcgagtcaaagtcgttgttgatgaattttcatccatgagttgttaagttg---atgaattatcatctatgagttgtcgagttgtcttctacccatgt 8489864  T
Q  120 gttgttaaagaagtacctatgaagattatacgatgttcatga 161  Q
    ||||||||||||||||||||||||||||||||||||| ||||    
T  8489865 gttgttaaagaagtacctatgaagattatacgatgtttatga 8489906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 20 - 161
Target Start/End: Complemental strand, 19775095 - 19774954
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttactgagttgtattctactcatat 119  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||   ||||||| ||||||  || |    
T  19775095 ttgtcgagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatctatgagttgtcgagttgtcttctacctatgt 19774996  T
Q  120 gttgttaaagaagtacctatgaagattatacgatgttcatga 161  Q
    ||||||||||||||||||| ||||||||||||||||| ||||    
T  19774995 gttgttaaagaagtacctacgaagattatacgatgtttatga 19774954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 21 - 155
Target Start/End: Complemental strand, 11069595 - 11069460
Alignment:
Q  21 tgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttact-gagttgtattctactcatat 119  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||  ||||||||||||| |||||||  | ||||||| |||||| ||| |    
T  11069595 tgtcgagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatccatgagtttgtcgagttgtgttctacccatgt 11069496  T
Q  120 gttgttaaagaagtacctatgaagattatacgatgt 155  Q
    ||||||||||||||||||| ||||||||||||||||    
T  11069495 gttgttaaagaagtacctacgaagattatacgatgt 11069460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 21 - 155
Target Start/End: Complemental strand, 14498852 - 14498717
Alignment:
Q  21 tgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttact-gagttgtattctactcatat 119  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||  ||||||||||||| |||||||  | ||||||| |||||| ||| |    
T  14498852 tgtcgagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatccatgagtttgtcgagttgtgttctacccatgt 14498753  T
Q  120 gttgttaaagaagtacctatgaagattatacgatgt 155  Q
    ||||||||||||||||||| ||||||||||||||||    
T  14498752 gttgttaaagaagtacctacgaagattatacgatgt 14498717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 21 - 155
Target Start/End: Complemental strand, 22321191 - 22321056
Alignment:
Q  21 tgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttact-gagttgtattctactcatat 119  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||  ||||||||||||| |||||||  | ||||||| |||||| ||| |    
T  22321191 tgtcgagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatccatgagtttgtcgagttgtgttctacccatgt 22321092  T
Q  120 gttgttaaagaagtacctatgaagattatacgatgt 155  Q
    ||||||||||||||||||| ||||||||||||||||    
T  22321091 gttgttaaagaagtacctacgaagattatacgatgt 22321056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 21 - 155
Target Start/End: Complemental strand, 22336246 - 22336111
Alignment:
Q  21 tgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttact-gagttgtattctactcatat 119  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||  ||||||||||||| |||||||  | ||||||| |||||| ||| |    
T  22336246 tgtcgagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatccatgagtttgtcgagttgtgttctacccatgt 22336147  T
Q  120 gttgttaaagaagtacctatgaagattatacgatgt 155  Q
    ||||||||||||||||||| ||||||||||||||||    
T  22336146 gttgttaaagaagtacctacgaagattatacgatgt 22336111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 21 - 155
Target Start/End: Original strand, 27410226 - 27410361
Alignment:
Q  21 tgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttact-gagttgtattctactcatat 119  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||  ||||||||||||| |||||||  | ||||||| |||||| ||| |    
T  27410226 tgtcgagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatccatgagtttgtcgagttgtgttctacccatgt 27410325  T
Q  120 gttgttaaagaagtacctatgaagattatacgatgt 155  Q
    ||||||||||||||||||| ||||||||||||||||    
T  27410326 gttgttaaagaagtacctacgaagattatacgatgt 27410361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 21 - 155
Target Start/End: Complemental strand, 28949249 - 28949114
Alignment:
Q  21 tgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttact-gagttgtattctactcatat 119  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||  ||||||||||||| |||||||  | ||||||| |||||| ||| |    
T  28949249 tgtcgagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatccatgagtttgtcgagttgtgttctacccatgt 28949150  T
Q  120 gttgttaaagaagtacctatgaagattatacgatgt 155  Q
    ||||||||||||||||||| ||||||||||||||||    
T  28949149 gttgttaaagaagtacctacgaagattatacgatgt 28949114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 21 - 155
Target Start/End: Complemental strand, 55022392 - 55022257
Alignment:
Q  21 tgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttact-gagttgtattctactcatat 119  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||  ||||||||||||| |||||||  | |||||||||||||| ||| |    
T  55022392 tgtcgagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatccatgagtttgtcgagttgtattctacccatgt 55022293  T
Q  120 gttgttaaagaagtacctatgaagattatacgatgt 155  Q
    ||||||||||||||||||| ||||||| ||||||||    
T  55022292 gttgttaaagaagtacctacgaagattgtacgatgt 55022257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 20 - 161
Target Start/End: Original strand, 4589494 - 4589635
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttactgagttgtattctactcatat 119  Q
    ||||||||||||||| |||||||||||||||||||| |||||||||||||||||  |||||||||||||||||||||   ||||||| ||||||  || |    
T  4589494 ttgtcgagtcaaagttgttgttgatgaattatcatctatgagttgttaagttgtcgatgaattatcatctatgagttgtcgagttgtcttctacctatgt 4589593  T
Q  120 gttgttaaagaagtacctatgaagattatacgatgttcatga 161  Q
    ||||||||||||||||||| |||| |||||||||||| ||||    
T  4589594 gttgttaaagaagtacctacgaaggttatacgatgtttatga 4589635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 25 - 155
Target Start/End: Original strand, 4107985 - 4108116
Alignment:
Q  25 gagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttact-gagttgtattctactcatatgttg 123  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||  ||||||||||||| |||||||  | ||||||| |||||| ||| |||||    
T  4107985 gagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatccatgagtttgtcgagttgtcttctacccatgtgttg 4108084  T
Q  124 ttaaagaagtacctatgaagattatacgatgt 155  Q
    ||||||||||||||| ||||||||||||||||    
T  4108085 ttaaagaagtacctacgaagattatacgatgt 4108116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 25 - 155
Target Start/End: Original strand, 4111837 - 4111968
Alignment:
Q  25 gagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttact-gagttgtattctactcatatgttg 123  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||  ||||||||||||| |||||||  | ||||||| |||||| ||| |||||    
T  4111837 gagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatccatgagtttgtcgagttgtcttctacccatgtgttg 4111936  T
Q  124 ttaaagaagtacctatgaagattatacgatgt 155  Q
    ||||||||||||||| ||||||||||||||||    
T  4111937 ttaaagaagtacctacgaagattatacgatgt 4111968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 21 - 155
Target Start/End: Complemental strand, 7109223 - 7109088
Alignment:
Q  21 tgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttact-gagttgtattctactcatat 119  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||  ||||||||||||| |||||||  | ||||||| ||||||  || |    
T  7109223 tgtcgagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatccatgagtttgtcgagttgtgttctacctatgt 7109124  T
Q  120 gttgttaaagaagtacctatgaagattatacgatgt 155  Q
    ||||||||||||||||||| ||||||||||||||||    
T  7109123 gttgttaaagaagtacctacgaagattatacgatgt 7109088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 21 - 155
Target Start/End: Complemental strand, 7113158 - 7113023
Alignment:
Q  21 tgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttact-gagttgtattctactcatat 119  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||  ||||||||||||| |||||||  | ||||||| ||||||  || |    
T  7113158 tgtcgagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatccatgagtttgtcgagttgtgttctacctatgt 7113059  T
Q  120 gttgttaaagaagtacctatgaagattatacgatgt 155  Q
    ||||||||||||||||||| ||||||||||||||||    
T  7113058 gttgttaaagaagtacctacgaagattatacgatgt 7113023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 21 - 155
Target Start/End: Complemental strand, 15616901 - 15616766
Alignment:
Q  21 tgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttact-gagttgtattctactcatat 119  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||  ||||||||||||| |||||||  | ||||| | |||||| ||| |    
T  15616901 tgtcgagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatccatgagtttgtcgagttatgttctacccatgt 15616802  T
Q  120 gttgttaaagaagtacctatgaagattatacgatgt 155  Q
    ||||||||||||||||||| ||||||||||||||||    
T  15616801 gttgttaaagaagtacctacgaagattatacgatgt 15616766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 20 - 161
Target Start/End: Original strand, 17317709 - 17317850
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttactgagttgtattctactcatat 119  Q
    |||||||||||| |||||||||||||||||||||||||||| ||||||||| ||  |||||||||||||||||||||   ||||||| ||||||  ||||    
T  17317709 ttgtcgagtcaaggtcgttgttgatgaattatcatccatgaattgttaagtcgtcgatgaattatcatctatgagttgtcgagttgtcttctacctatat 17317808  T
Q  120 gttgttaaagaagtacctatgaagattatacgatgttcatga 161  Q
    ||||||||||||||||| | ||| ||||||||||||| ||||    
T  17317809 gttgttaaagaagtaccaacgaatattatacgatgtttatga 17317850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 21 - 155
Target Start/End: Original strand, 11166111 - 11166246
Alignment:
Q  21 tgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttact-gagttgtattctactcatat 119  Q
    |||||| |||| |||||||||||||||||||||||||||||||||||||||||  ||||||||||||| |||||||  | ||||||| |||||| ||| |    
T  11166111 tgtcgattcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatccatgagtttgtcgagttgtgttctacccatgt 11166210  T
Q  120 gttgttaaagaagtacctatgaagattatacgatgt 155  Q
    |||||||||||||||||||  |||||||||||||||    
T  11166211 gttgttaaagaagtacctacaaagattatacgatgt 11166246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 20 - 96
Target Start/End: Complemental strand, 5222850 - 5222774
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagtt 96  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  5222850 ttgtcgagtcaaagtcgttgttgataaattatcatccatgagttgttaagttgttgatgaattatcatctatgagtt 5222774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 20 - 161
Target Start/End: Complemental strand, 14670598 - 14670449
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatcta--------tgagttactgagttgtattct 111  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||| | || || ||||| |        ||||||  |||||||| |||     
T  14670598 ttgtcgagtcaaagtcgttgttgatgaattgtcatccatgagttgttaagttgttgacgagttgtcatccatgagttgttgagttgttgagttgtcttca 14670499  T
Q  112 actcatatgttgttaaagaagtacctatgaagattatacgatgttcatga 161  Q
    || ||| ||||||||||||||||||||||||||||||| |||||| ||||    
T  14670498 acccatgtgttgttaaagaagtacctatgaagattatatgatgtttatga 14670449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 20 - 161
Target Start/End: Complemental strand, 14682120 - 14681971
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatg--------agttactgagttgtattct 111  Q
    |||||||||||||||||||||||||||||| |||| ||||||||||||||||||| |  | || ||||| |||        ||||  |||||||| ||||    
T  14682120 ttgtcgagtcaaagtcgttgttgatgaattgtcatgcatgagttgttaagttgttgacaagttgtcatccatgagttgttaagttgttgagttgtcttct 14682021  T
Q  112 actcatatgttgttaaagaagtacctatgaagattatacgatgttcatga 161  Q
    || ||| ||||||||||||||||||||||||||||||| |||||| ||||    
T  14682020 acccatgtgttgttaaagaagtacctatgaagattatatgatgtttatga 14681971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 20 - 91
Target Start/End: Complemental strand, 46821974 - 46821903
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctat 91  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| |||||    
T  46821974 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttattgagttatcttctat 46821903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 20 - 96
Target Start/End: Original strand, 18700869 - 18700945
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagtt 96  Q
    ||||||||||||||||||||||||||| || |||||||||||||||||||||||| |||| || ||||| |||||||    
T  18700869 ttgtcgagtcaaagtcgttgttgatgagttgtcatccatgagttgttaagttgttgatgagttgtcatccatgagtt 18700945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 20 - 156
Target Start/End: Original strand, 10543014 - 10543158
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatga---gtta-----ctgagttgtattct 111  Q
    ||||||||||||||||||||||||||| || |||||||||||||||||||||||| |||| || ||||| | ||   ||||      |||||||| ||||    
T  10543014 ttgtcgagtcaaagtcgttgttgatgagttgtcatccatgagttgttaagttgttgatgagttgtcatccacgattcgttaaattgttgagttgtcttct 10543113  T
Q  112 actcatatgttgttaaagaagtacctatgaagattatacgatgtt 156  Q
    || ||| ||||||||| ||||| | ||||||||||||| ||||||    
T  10543114 acccatgtgttgttaatgaagtgcttatgaagattatatgatgtt 10543158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 24 - 74
Target Start/End: Complemental strand, 13543728 - 13543678
Alignment:
Q  24 cgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgtt 74  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13543728 cgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgtt 13543678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 23 - 96
Target Start/End: Original strand, 2842664 - 2842737
Alignment:
Q  23 tcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagtt 96  Q
    |||||||||||||||||||||||| || |||||||||||||||||||||||| |||| || ||||| |||||||    
T  2842664 tcgagtcaaagtcgttgttgatgagttgtcatccatgagttgttaagttgttgatgagttgtcatccatgagtt 2842737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 20 - 74
Target Start/End: Complemental strand, 35353414 - 35353360
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgtt 74  Q
    ||||||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  35353414 ttgtcgagtcaaagtcgttgttgatgagttgtcatccatgagttgttaagttgtt 35353360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 20 - 96
Target Start/End: Complemental strand, 14441153 - 14441077
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagtt 96  Q
    ||||||||||||||||||||| ||||| || | ||||||||| |||||||||||| ||||||| ||||| |||||||    
T  14441153 ttgtcgagtcaaagtcgttgtcgatgagttgttatccatgagctgttaagttgttgatgaattgtcatccatgagtt 14441077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 20 - 72
Target Start/End: Original strand, 42353679 - 42353731
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttg 72  Q
    ||||||||||||||||||||||||||| || ||||||||||||||||||||||    
T  42353679 ttgtcgagtcaaagtcgttgttgatgagttgtcatccatgagttgttaagttg 42353731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 20 - 67
Target Start/End: Original strand, 12120173 - 12120220
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgtta 67  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||    
T  12120173 ttgttgagtcaaagtcgttgttgatgaattatcatccatgagttgtta 12120220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 36 - 166
Target Start/End: Complemental strand, 14441104 - 14440973
Alignment:
Q  36 gttgttgatgaattatcatccatgagttgttaagttgttaatgaattatc-atctatgagttactgagttgtattctactcatatgttgttaaagaagta 134  Q
    |||||||||||||| |||||||||||||||||||||||| ||   |  || ||| |||||||  |||||||| |||||  ||| |||||||||  ||||     
T  14441104 gttgttgatgaattgtcatccatgagttgttaagttgttgatttgtcttctatccatgagttgttgagttgtcttctatccatgtgttgttaataaagtg 14441005  T
Q  135 cctatgaagattatacgatgttcatgacgttg 166  Q
    | |||||||||||||||||||| |||| ||||    
T  14441004 cttatgaagattatacgatgtttatgatgttg 14440973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 20 - 67
Target Start/End: Original strand, 38962291 - 38962338
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgtta 67  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||    
T  38962291 ttgtcgagtcaaagtcgttgttgatgaattatcattcatgagttgtta 38962338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 20 - 74
Target Start/End: Complemental strand, 10562532 - 10562478
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgtt 74  Q
    ||||||||||||||||||||||||||| || ||||||||||||| ||||||||||    
T  10562532 ttgtcgagtcaaagtcgttgttgatgagttgtcatccatgagttattaagttgtt 10562478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 20 - 73
Target Start/End: Complemental strand, 5214776 - 5214723
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgt 73  Q
    ||||||||||||||||||||||||||| || ||||||||||||| |||||||||    
T  5214776 ttgtcgagtcaaagtcgttgttgatgagttgtcatccatgagttattaagttgt 5214723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 36 - 97
Target Start/End: Original strand, 13520978 - 13521039
Alignment:
Q  36 gttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagtta 97  Q
    |||||||||||||| |||||||||||||||||||||||| |||| || ||||| ||||||||    
T  13520978 gttgttgatgaattttcatccatgagttgttaagttgttgatgagttgtcatccatgagtta 13521039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 76 - 155
Target Start/End: Complemental strand, 30065452 - 30065372
Alignment:
Q  76 atgaattatcatctatgagttact-gagttgtattctactcatatgttgttaaagaagtacctatgaagattatacgatgt 155  Q
    ||||||||||||| |||||||  | |||| || |||||| ||| |||||||||||||||||||| ||||||||||||||||    
T  30065452 atgaattatcatccatgagtttgtcgagtggtgttctacccatgtgttgttaaagaagtacctacgaagattatacgatgt 30065372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 20 - 96
Target Start/End: Original strand, 43890179 - 43890255
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagtt 96  Q
    ||||||||||||||||||||||||||| || |||||||||  ||||||||||||| | || || ||||| |||||||    
T  43890179 ttgtcgagtcaaagtcgttgttgatgagttgtcatccatggattgttaagttgttgacgagttgtcatccatgagtt 43890255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 29 - 74
Target Start/End: Original strand, 19884816 - 19884861
Alignment:
Q  29 caaagtcgttgttgatgaattatcatccatgagttgttaagttgtt 74  Q
    |||||||||||||||||| || ||||||||||||||||||||||||    
T  19884816 caaagtcgttgttgatgagttgtcatccatgagttgttaagttgtt 19884861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 20 - 65
Target Start/End: Complemental strand, 44269453 - 44269408
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgt 65  Q
    ||||||||||||||||||||||||||| || |||||||||||||||    
T  44269453 ttgtcgagtcaaagtcgttgttgatgagttgtcatccatgagttgt 44269408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 63
Target Start/End: Complemental strand, 30065475 - 30065432
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagtt 63  Q
    |||||||||||| |||||||| ||||||||||||||||||||||    
T  30065475 ttgtcgagtcaaggtcgttgtcgatgaattatcatccatgagtt 30065432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 155
Target Start/End: Complemental strand, 5220572 - 5220536
Alignment:
Q  119 tgttgttaaagaagtacctatgaagattatacgatgt 155  Q
    ||||||||||||||||||||||||||||||| |||||    
T  5220572 tgttgttaaagaagtacctatgaagattatatgatgt 5220536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 36 - 88
Target Start/End: Complemental strand, 15565371 - 15565319
Alignment:
Q  36 gttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatc 88  Q
    |||||||||||||| |||||| |||||||||| |||||| ||||||| |||||    
T  15565371 gttgttgatgaattgtcatccgtgagttgttaggttgttgatgaattgtcatc 15565319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 224
Target Start/End: Complemental strand, 5214616 - 5214582
Alignment:
Q  190 tatgttgtttatgatattgattctgatgttgttat 224  Q
    |||||||||||||||||||||| ||||||||||||    
T  5214616 tatgttgtttatgatattgattatgatgttgttat 5214582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 224
Target Start/End: Complemental strand, 14670420 - 14670382
Alignment:
Q  186 ttgctatgttgtttatgatattgattctgatgttgttat 224  Q
    |||||||||||||||||||||||||| |||| |||||||    
T  14670420 ttgctatgttgtttatgatattgattatgatattgttat 14670382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 74
Target Start/End: Complemental strand, 15565338 - 15565300
Alignment:
Q  36 gttgttgatgaattatcatccatgagttgttaagttgtt 74  Q
    |||||||||||||| ||||||| ||||||||||||||||    
T  15565338 gttgttgatgaattgtcatccacgagttgttaagttgtt 15565300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 74
Target Start/End: Original strand, 18700918 - 18700956
Alignment:
Q  36 gttgttgatgaattatcatccatgagttgttaagttgtt 74  Q
    ||||||||||| || ||||||||||||||||||||||||    
T  18700918 gttgttgatgagttgtcatccatgagttgttaagttgtt 18700956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 191 - 224
Target Start/End: Original strand, 2842801 - 2842834
Alignment:
Q  191 atgttgtttatgatattgattctgatgttgttat 224  Q
    ||||||||||||||||||||| ||||||||||||    
T  2842801 atgttgtttatgatattgattatgatgttgttat 2842834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 191 - 224
Target Start/End: Complemental strand, 5214647 - 5214614
Alignment:
Q  191 atgttgtttatgatattgattctgatgttgttat 224  Q
    ||||||||||||||||||||| ||||||||||||    
T  5214647 atgttgtttatgatattgattatgatgttgttat 5214614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 191 - 224
Target Start/End: Complemental strand, 31414938 - 31414905
Alignment:
Q  191 atgttgtttatgatattgattctgatgttgttat 224  Q
    ||||||||||||||||||||| ||||||||||||    
T  31414938 atgttgtttatgatattgattatgatgttgttat 31414905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 191 - 224
Target Start/End: Complemental strand, 35353307 - 35353274
Alignment:
Q  191 atgttgtttatgatattgattctgatgttgttat 224  Q
    ||||||||||||||||||||| ||||||||||||    
T  35353307 atgttgtttatgatattgattatgatgttgttat 35353274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 191 - 224
Target Start/End: Complemental strand, 44269373 - 44269340
Alignment:
Q  191 atgttgtttatgatattgattctgatgttgttat 224  Q
    ||||||||||||||||||||| ||||||||||||    
T  44269373 atgttgtttatgatattgattatgatgttgttat 44269340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 57 - 113
Target Start/End: Original strand, 14067289 - 14067345
Alignment:
Q  57 atgagttgttaagttgttaatgaattatcatctatgagttactgagttgtattctac 113  Q
    |||||||||||||||||  ||||||||||||| |||||||   ||||||| ||||||    
T  14067289 atgagttgttaagttgtcgatgaattatcatccatgagttgtcgagttgtgttctac 14067345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165 (Bit Score: 165; Significance: 2e-88; HSPs: 2)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 20 - 228
Target Start/End: Complemental strand, 3256 - 3049
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttactgagttgtattctactcatat 119  Q
    |||||||||||||||||||||||||||||||||||||||| |||| ||||||||||| ||||||||||||||||||| |||||||||||||||| ||| |    
T  3256 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgtgttgctaagttgttaacgaattatcatctatgagttgctgagttgtattctacccatgt 3157  T
Q  120 gttgttaaagaagtacctatgaagattatacgatgttcatgacgttgtcaaagttgcttatgacgattgctatgttgtttatgatattgattctgatgtt 219  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||| || |||||||    
T  3156 gttgttaaagaagtacctatgaagattatacgatgttcatgacgttgtc-aagttgcttaggacgattgctatgttgtttatgatattgtttgtgatgtt 3058  T
Q  220 gttatatga 228  Q
    |||||||||    
T  3057 gttatatga 3049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165; HSP #2
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 20 - 228
Target Start/End: Complemental strand, 7319 - 7112
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttactgagttgtattctactcatat 119  Q
    |||||||||||||||||||||||||||||||||||||||| |||| ||||||||||| ||||||||||||||||||| |||||||||||||||| ||| |    
T  7319 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgtgttgctaagttgttaacgaattatcatctatgagttgctgagttgtattctacccatgt 7220  T
Q  120 gttgttaaagaagtacctatgaagattatacgatgttcatgacgttgtcaaagttgcttatgacgattgctatgttgtttatgatattgattctgatgtt 219  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||| || |||||||    
T  7219 gttgttaaagaagtacctatgaagattatacgatgttcatgacgttgtc-aagttgcttaggacgattgctatgttgtttatgatattgtttgtgatgtt 7121  T
Q  220 gttatatga 228  Q
    |||||||||    
T  7120 gttatatga 7112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 165; Significance: 2e-88; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 20 - 224
Target Start/End: Original strand, 25177 - 25379
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttactgagttgtattctactcatat 119  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||| ||| |    
T  25177 ttgtcgagtcaaagtcattgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctacgagttgctgagttgtattctacccatgt 25276  T
Q  120 gttgttaaagaagtacctatgaagattatacgatgttcatgacgttgtcaaagttgcttatgacgattgctatgttgtttatgatattgattctgatgtt 219  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| |||||||    
T  25277 gttgttaaagaagtacctatgaagattatacgatgttcatgacgttgtc-aagttgc-tatgacgattgctatgttgtttatgatattgattgtgatgtt 25374  T
Q  220 gttat 224  Q
    |||||    
T  25375 gttat 25379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 163; Significance: 3e-87; HSPs: 49)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 163; E-Value: 3e-87
Query Start/End: Original strand, 20 - 222
Target Start/End: Complemental strand, 18301826 - 18301625
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttactgagttgtattctactcatat 119  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||| |    
T  18301826 ttgtcgagtcaaagtcattgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttgctgagttgtattctacccatgt 18301727  T
Q  120 gttgttaaagaagtacctatgaagattatacgatgttcatgacgttgtcaaagttgcttatgacgattgctatgttgtttatgatattgattctgatgtt 219  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||  ||||||||||||| |||||||||||||||||||||||||||| |||||||    
T  18301726 gttgttaaagaagtacctatgaagattacacgatgttcatgacgttgt-taagttgcttatgatgattgctatgttgtttatgatattgattgtgatgtt 18301628  T
Q  220 gtt 222  Q
    |||    
T  18301627 gtt 18301625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 20 - 155
Target Start/End: Complemental strand, 20487321 - 20487186
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttactgagttgtattctactcatat 119  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||  |||||||| |||||| ||| |    
T  20487321 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttgatgaattatcatctatgagttgttgagttgtcttctacccatgt 20487222  T
Q  120 gttgttaaagaagtacctatgaagattatacgatgt 155  Q
    |||||||||||||||||||||||||||||| |||||    
T  20487221 gttgttaaagaagtacctatgaagattatatgatgt 20487186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 21 - 161
Target Start/End: Original strand, 13919077 - 13919217
Alignment:
Q  21 tgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttactgagttgtattctactcatatg 120  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||   ||||||| |||||| ||| ||    
T  13919077 tgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatctatgagttgtcgagttgtcttctacccatgtg 13919176  T
Q  121 ttgttaaagaagtacctatgaagattatacgatgttcatga 161  Q
    |||||||||||||||||||||||||||||||||||| ||||    
T  13919177 ttgttaaagaagtacctatgaagattatacgatgtttatga 13919217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 20 - 161
Target Start/End: Original strand, 12705240 - 12705381
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttactgagttgtattctactcatat 119  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||   ||||||| |||||| ||| |    
T  12705240 ttgtcgagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatctatgagttgtcgagttgtcttctacccatgt 12705339  T
Q  120 gttgttaaagaagtacctatgaagattatacgatgttcatga 161  Q
    ||||||||||||||||||||||||||||||||||||| ||||    
T  12705340 gttgttaaagaagtacctatgaagattatacgatgtttatga 12705381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 20 - 164
Target Start/End: Original strand, 25927822 - 25927968
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgtta--atgaattatcatctatgagttactgagttgtattctactcat 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||   |||||||||||||||||||||  |||||||| |||||| |||    
T  25927822 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagtttttttgatgaattatcatctatgagttgttgagttgtcttctacccat 25927921  T
Q  118 atgttgttaaagaagtacctatgaagattatacgatgttcatgacgt 164  Q
     ||||||||||||||||||||||||||||||| |||||| |||||||    
T  25927922 gtgttgttaaagaagtacctatgaagattatatgatgtttatgacgt 25927968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 20 - 155
Target Start/End: Original strand, 45170612 - 45170747
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttactgagttgtattctactcatat 119  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||   ||||||| |||||| ||| |    
T  45170612 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatctatgagttgtcgagttgttttctacccatgt 45170711  T
Q  120 gttgttaaagaagtacctatgaagattatacgatgt 155  Q
    ||||||||||||||||||| ||||||||||||||||    
T  45170712 gttgttaaagaagtacctacgaagattatacgatgt 45170747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 20 - 161
Target Start/End: Original strand, 2530735 - 2530876
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttactgagttgtattctactcatat 119  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||| |||||   ||||||| |||||| ||| |    
T  2530735 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgaattgttaagttgttgatgaattatcatctaagagttgtcgagttgtcttctacccatgt 2530834  T
Q  120 gttgttaaagaagtacctatgaagattatacgatgttcatga 161  Q
    ||||||||||||||||| ||||||||||||||||||| ||||    
T  2530835 gttgttaaagaagtacccatgaagattatacgatgtttatga 2530876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 20 - 161
Target Start/End: Original strand, 2832778 - 2832919
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttactgagttgtattctactcatat 119  Q
    ||||| ||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||   ||||||| ||||||  || |    
T  2832778 ttgtcaagtcaaagtcgttgttgatgaattatcatccatgatttgttaagttgttgatgaattatcatctatgagttgtcgagttgtcttctacctatgt 2832877  T
Q  120 gttgttaaagaagtacctatgaagattatacgatgttcatga 161  Q
    ||||||||||||||||||||||||||||||||||||| ||||    
T  2832878 gttgttaaagaagtacctatgaagattatacgatgtttatga 2832919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 20 - 161
Target Start/End: Complemental strand, 15083696 - 15083555
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttactgagttgtattctactcatat 119  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||  ||||| |||||||||||||||   ||||||| |||||| ||| |    
T  15083696 ttgtcgagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaaatatcatctatgagttgtcgagttgtcttctacccatgt 15083597  T
Q  120 gttgttaaagaagtacctatgaagattatacgatgttcatga 161  Q
    ||||||||||||||||||||||||||||||||||||| ||||    
T  15083596 gttgttaaagaagtacctatgaagattatacgatgtttatga 15083555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 21 - 161
Target Start/End: Original strand, 1859406 - 1859546
Alignment:
Q  21 tgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttactgagttgtattctactcatatg 120  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||| |||||   ||||||| |||||| ||| ||    
T  1859406 tgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatctacgagttgtcgagttgttttctacccatgtg 1859505  T
Q  121 ttgttaaagaagtacctatgaagattatacgatgttcatga 161  Q
    ||||||||||||||||||||||| |||||||||||| ||||    
T  1859506 ttgttaaagaagtacctatgaaggttatacgatgtttatga 1859546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 20 - 161
Target Start/End: Complemental strand, 39721766 - 39721625
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttactgagttgtattctactcatat 119  Q
    |||||||||||| ||||||||| |||||||||||||||||||||||||||||||  ||||||||||||| |||||||   ||||||| |||||| ||| |    
T  39721766 ttgtcgagtcaaggtcgttgttaatgaattatcatccatgagttgttaagttgtcgatgaattatcatccatgagttgtcgagttgtcttctacccatgt 39721667  T
Q  120 gttgttaaagaagtacctatgaagattatacgatgttcatga 161  Q
    ||||||||||||||||||||||||||||||||||||| ||||    
T  39721666 gttgttaaagaagtacctatgaagattatacgatgtttatga 39721625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 20 - 161
Target Start/End: Complemental strand, 18425185 - 18425044
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttactgagttgtattctactcatat 119  Q
    |||||||||||| |||||||||||||| ||||||||||||||||||||||||||  |||||||||||||||||||||   ||||||| ||||||  || |    
T  18425185 ttgtcgagtcaaggtcgttgttgatgagttatcatccatgagttgttaagttgtcgatgaattatcatctatgagttgtcgagttgtcttctacctatgt 18425086  T
Q  120 gttgttaaagaagtacctatgaagattatacgatgttcatga 161  Q
    ||||||||||||||||||| ||||||||||||||||| ||||    
T  18425085 gttgttaaagaagtacctacgaagattatacgatgtttatga 18425044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 20 - 161
Target Start/End: Complemental strand, 26291897 - 26291756
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttactgagttgtattctactcatat 119  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||   ||||||| ||| ||  || |    
T  26291897 ttgtcgagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatctatgagttgtcgagttgtcttccacctatgt 26291798  T
Q  120 gttgttaaagaagtacctatgaagattatacgatgttcatga 161  Q
    ||||||||||||||||||| ||||||||||||||||| ||||    
T  26291797 gttgttaaagaagtacctacgaagattatacgatgtttatga 26291756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 21 - 155
Target Start/End: Original strand, 71349 - 71484
Alignment:
Q  21 tgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttact-gagttgtattctactcatat 119  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||  ||||||||||||| |||||||  | ||||||| |||||| ||| |    
T  71349 tgtcgagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatccatgagtttgtcgagttgtgttctacccatgt 71448  T
Q  120 gttgttaaagaagtacctatgaagattatacgatgt 155  Q
    ||||||||||||||||||| ||||||||||||||||    
T  71449 gttgttaaagaagtacctacgaagattatacgatgt 71484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 21 - 155
Target Start/End: Original strand, 75458 - 75593
Alignment:
Q  21 tgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttact-gagttgtattctactcatat 119  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||  ||||||||||||| |||||||  | ||||||| |||||| ||| |    
T  75458 tgtcgagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatccatgagtttgtcgagttgtgttctacccatgt 75557  T
Q  120 gttgttaaagaagtacctatgaagattatacgatgt 155  Q
    ||||||||||||||||||| ||||||||||||||||    
T  75558 gttgttaaagaagtacctacgaagattatacgatgt 75593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 21 - 155
Target Start/End: Original strand, 16907793 - 16907928
Alignment:
Q  21 tgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttact-gagttgtattctactcatat 119  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||  ||||||||||||| |||||||  | ||||||| |||||| ||| |    
T  16907793 tgtcgagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatccatgagtttgtcgagttgtgttctacccatgt 16907892  T
Q  120 gttgttaaagaagtacctatgaagattatacgatgt 155  Q
    ||||||||||||||||||| ||||||||||||||||    
T  16907893 gttgttaaagaagtacctacgaagattatacgatgt 16907928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 21 - 155
Target Start/End: Complemental strand, 18282890 - 18282755
Alignment:
Q  21 tgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttact-gagttgtattctactcatat 119  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||  ||||||||||||| |||||||  | ||||||| |||||| ||| |    
T  18282890 tgtcgagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatccatgagtttgtcgagttgtgttctacccatgt 18282791  T
Q  120 gttgttaaagaagtacctatgaagattatacgatgt 155  Q
    ||||||||||||||||||| ||||||||||||||||    
T  18282790 gttgttaaagaagtacctacgaagattatacgatgt 18282755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 21 - 155
Target Start/End: Complemental strand, 32633 - 32498
Alignment:
Q  21 tgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttact-gagttgtattctactcatat 119  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||  ||||||||||||| |||||||  | ||||||| ||||||  || |    
T  32633 tgtcgagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatccatgagtttgtcgagttgtgttctacctatgt 32534  T
Q  120 gttgttaaagaagtacctatgaagattatacgatgt 155  Q
    ||||||||||||||||||| ||||||||||||||||    
T  32533 gttgttaaagaagtacctacgaagattatacgatgt 32498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 21 - 155
Target Start/End: Complemental strand, 12718192 - 12718057
Alignment:
Q  21 tgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttact-gagttgtattctactcatat 119  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||  ||||||||||||| |||||||  | ||||||| |||||| ||| |    
T  12718192 tgtcgagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatccatgagtttgtcgagttgtgttctacccatgt 12718093  T
Q  120 gttgttaaagaagtacctatgaagattatacgatgt 155  Q
     |||||||||||||||||| ||||||||||||||||    
T  12718092 attgttaaagaagtacctacgaagattatacgatgt 12718057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 21 - 155
Target Start/End: Complemental strand, 12723103 - 12722968
Alignment:
Q  21 tgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttact-gagttgtattctactcatat 119  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||  ||||||||||||| |||||||  | ||||||| |||||| ||| |    
T  12723103 tgtcgagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatccatgagtttgtcgagttgtgttctacccatgt 12723004  T
Q  120 gttgttaaagaagtacctatgaagattatacgatgt 155  Q
     |||||||||||||||||| ||||||||||||||||    
T  12723003 attgttaaagaagtacctacgaagattatacgatgt 12722968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 21 - 155
Target Start/End: Complemental strand, 16113765 - 16113630
Alignment:
Q  21 tgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttact-gagttgtattctactcatat 119  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||  ||||||||||||| |||||||  | ||||||| ||||||  || |    
T  16113765 tgtcgagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatccatgagtttgtcgagttgtgttctacctatgt 16113666  T
Q  120 gttgttaaagaagtacctatgaagattatacgatgt 155  Q
    ||||||||||||||||||| ||||||||||||||||    
T  16113665 gttgttaaagaagtacctacgaagattatacgatgt 16113630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 21 - 155
Target Start/End: Complemental strand, 16116918 - 16116783
Alignment:
Q  21 tgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttact-gagttgtattctactcatat 119  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||  ||||||||||||| |||||||  | ||||||| ||||||  || |    
T  16116918 tgtcgagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatccatgagtttgtcgagttgtgttctacctatgt 16116819  T
Q  120 gttgttaaagaagtacctatgaagattatacgatgt 155  Q
    ||||||||||||||||||| ||||||||||||||||    
T  16116818 gttgttaaagaagtacctacgaagattatacgatgt 16116783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 21 - 155
Target Start/End: Complemental strand, 18278927 - 18278792
Alignment:
Q  21 tgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttact-gagttgtattctactcatat 119  Q
    |||| |||||| |||||||||||||||||||||||||||||||||||||||||  ||||||||||||| |||||||  | ||||||| |||||| ||| |    
T  18278927 tgtcaagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatccatgagtttgtcgagttgtgttctacccatgt 18278828  T
Q  120 gttgttaaagaagtacctatgaagattatacgatgt 155  Q
    ||||||||||||||||||| ||||||||||||||||    
T  18278827 gttgttaaagaagtacctacgaagattatacgatgt 18278792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 20 - 96
Target Start/End: Complemental strand, 24274875 - 24274799
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagtt 96  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||| |||||||    
T  24274875 ttgtcgagtcaaagtcgttgttgaggaattatcatccatgagttgttaagttgttgatgaattatcatccatgagtt 24274799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 76 - 161
Target Start/End: Original strand, 7519677 - 7519762
Alignment:
Q  76 atgaattatcatctatgagttactgagttgtattctactcatatgttgttaaagaagtacctatgaagattatacgatgttcatga 161  Q
    |||||||||||||||||||||   ||||||| |||||| ||| |||||||||||||||||||||||||||||||||||||| ||||    
T  7519677 atgaattatcatctatgagttgtcgagttgtcttctacccatgtgttgttaaagaagtacctatgaagattatacgatgtttatga 7519762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 20 - 156
Target Start/End: Complemental strand, 16585231 - 16585087
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatg--------agttactgagttgtattct 111  Q
    ||||||||||||||||||||||||||| || |||||||||||||||||||||||| |||| || ||||| |||        ||||  |||||||| ||||    
T  16585231 ttgtcgagtcaaagtcgttgttgatgagttgtcatccatgagttgttaagttgttgatgagttgtcatccatgagtcgttaagttgttgagttgtcttct 16585132  T
Q  112 actcatatgttgttaaagaagtacctatgaagattatacgatgtt 156  Q
    || ||| ||||||||| ||||| | ||||||||||||| ||||||    
T  16585131 acccatgtgttgttaatgaagtgcttatgaagattatatgatgtt 16585087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 20 - 95
Target Start/End: Complemental strand, 16579332 - 16579257
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagt 95  Q
    ||||||||||||||||||||||||||| || |||||||||||||||||||||||| |||| || ||||| ||||||    
T  16579332 ttgtcgagtcaaagtcgttgttgatgagttgtcatccatgagttgttaagttgttgatgagttgtcatccatgagt 16579257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 20 - 95
Target Start/End: Original strand, 16586330 - 16586405
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagt 95  Q
    ||||||||||||||||||||||||||| || |||||||||||||||||||||||| |||| || ||||| ||||||    
T  16586330 ttgtcgagtcaaagtcgttgttgatgagttgtcatccatgagttgttaagttgttgatgagttgtcatccatgagt 16586405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 24 - 96
Target Start/End: Complemental strand, 14257996 - 14257924
Alignment:
Q  24 cgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagtt 96  Q
    ||||||||||||||||||||||| || |||||||||||||||||||||||| | ||||| ||||| |||||||    
T  14257996 cgagtcaaagtcgttgttgatgagttgtcatccatgagttgttaagttgttgaggaattgtcatccatgagtt 14257924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 20 - 80
Target Start/End: Original strand, 16461500 - 16461560
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaa 80  Q
    |||| |||||||||||||||||||||| || ||||||||||||||||||||||||||||||    
T  16461500 ttgttgagtcaaagtcgttgttgatgagttgtcatccatgagttgttaagttgttaatgaa 16461560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 20 - 96
Target Start/End: Complemental strand, 20585279 - 20585203
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagtt 96  Q
    |||||||||||||||| |||||||||| || |||||||||||||||||||||||| |||| || ||||| |||||||    
T  20585279 ttgtcgagtcaaagtcattgttgatgagttgtcatccatgagttgttaagttgttgatgagttgtcatccatgagtt 20585203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 20 - 81
Target Start/End: Original strand, 15605873 - 15605934
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaat 81  Q
    ||||||||||||| |||||||||||||||||||||||||||||| || ||||||| ||||||    
T  15605873 ttgtcgagtcaaattcgttgttgatgaattatcatccatgagtttttgagttgttgatgaat 15605934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 100 - 155
Target Start/End: Complemental strand, 12714408 - 12714353
Alignment:
Q  100 gagttgtattctactcatatgttgttaaagaagtacctatgaagattatacgatgt 155  Q
    ||||||| |||||| ||| |||||||||||||||||||| ||||||||||||||||    
T  12714408 gagttgtgttctacccatgtgttgttaaagaagtacctacgaagattatacgatgt 12714353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 36 - 156
Target Start/End: Complemental strand, 14257951 - 14257823
Alignment:
Q  36 gttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatg--------agttactgagttgtattctactcatatgttgttaa 127  Q
    |||||||| ||||| |||||||||||||||||||||||| | ||||| ||||| |||        ||||  |||||||| |||||| ||| |||||||||    
T  14257951 gttgttgaggaattgtcatccatgagttgttaagttgttgacgaattgtcatccatgagttgttaagttgttgagttgtcttctacccatgtgttgttaa 14257852  T
Q  128 agaagtacctatgaagattatacgatgtt 156  Q
     ||||| | ||||||||||||| ||||||    
T  14257851 tgaagtgcttatgaagattatatgatgtt 14257823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 20 - 67
Target Start/End: Original strand, 15082324 - 15082370
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgtta 67  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||    
T  15082324 ttgtcgagtcaaagtcgttgt-gatgaattatcatccatgagttgtta 15082370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 20 - 74
Target Start/End: Original strand, 14183819 - 14183873
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgtt 74  Q
    ||||||||||||||||||| ||||| | || ||||||||||||||||||||||||    
T  14183819 ttgtcgagtcaaagtcgtttttgattagttgtcatccatgagttgttaagttgtt 14183873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 36 - 74
Target Start/End: Original strand, 14933118 - 14933156
Alignment:
Q  36 gttgttgatgaattatcatccatgagttgttaagttgtt 74  Q
    |||||||||||||||||||||||||||||||||||||||    
T  14933118 gttgttgatgaattatcatccatgagttgttaagttgtt 14933156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 36 - 74
Target Start/End: Original strand, 15356553 - 15356591
Alignment:
Q  36 gttgttgatgaattatcatccatgagttgttaagttgtt 74  Q
    |||||||||||||||||||||||||||||||||||||||    
T  15356553 gttgttgatgaattatcatccatgagttgttaagttgtt 15356591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 36 - 74
Target Start/End: Original strand, 15360667 - 15360705
Alignment:
Q  36 gttgttgatgaattatcatccatgagttgttaagttgtt 74  Q
    |||||||||||||||||||||||||||||||||||||||    
T  15360667 gttgttgatgaattatcatccatgagttgttaagttgtt 15360705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 36 - 74
Target Start/End: Complemental strand, 24274826 - 24274788
Alignment:
Q  36 gttgttgatgaattatcatccatgagttgttaagttgtt 74  Q
    |||||||||||||||||||||||||||||||||||||||    
T  24274826 gttgttgatgaattatcatccatgagttgttaagttgtt 24274788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 20 - 74
Target Start/End: Complemental strand, 32300858 - 32300804
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgtt 74  Q
    |||| |||||||||||||||||||||| || |||||||||||| |||||||||||    
T  32300858 ttgttgagtcaaagtcgttgttgatgagttgtcatccatgagtcgttaagttgtt 32300804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 20 - 73
Target Start/End: Original strand, 12466473 - 12466526
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgt 73  Q
    ||||||| |||||||| |||||||||| || |||||||||||||||||||||||    
T  12466473 ttgtcgaatcaaagtcattgttgatgagttgtcatccatgagttgttaagttgt 12466526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 99 - 156
Target Start/End: Complemental strand, 32300804 - 32300747
Alignment:
Q  99 tgagttgtattctactcatatgttgttaaagaagtacctatgaagattatacgatgtt 156  Q
    |||||||| |||||| ||| ||||||||| ||||| | ||||||||||||||||||||    
T  32300804 tgagttgtcttctacccatgtgttgttaatgaagtgcttatgaagattatacgatgtt 32300747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 74
Target Start/End: Complemental strand, 20585230 - 20585192
Alignment:
Q  36 gttgttgatgaattatcatccatgagttgttaagttgtt 74  Q
    ||||||||||| || ||||||||||||||||||||||||    
T  20585230 gttgttgatgagttgtcatccatgagttgttaagttgtt 20585192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 191 - 224
Target Start/End: Original strand, 14933278 - 14933311
Alignment:
Q  191 atgttgtttatgatattgattctgatgttgttat 224  Q
    ||||||||||||||||||||| ||||||||||||    
T  14933278 atgttgtttatgatattgattatgatgttgttat 14933311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 191 - 224
Target Start/End: Original strand, 15356713 - 15356746
Alignment:
Q  191 atgttgtttatgatattgattctgatgttgttat 224  Q
    ||||||||||||||||||||| ||||||||||||    
T  15356713 atgttgtttatgatattgattatgatgttgttat 15356746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 191 - 224
Target Start/End: Original strand, 15360827 - 15360860
Alignment:
Q  191 atgttgtttatgatattgattctgatgttgttat 224  Q
    ||||||||||||||||||||| ||||||||||||    
T  15360827 atgttgtttatgatattgattatgatgttgttat 15360860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 191 - 224
Target Start/End: Original strand, 15360871 - 15360904
Alignment:
Q  191 atgttgtttatgatattgattctgatgttgttat 224  Q
    ||||||||||||||||||||| ||||||||||||    
T  15360871 atgttgtttatgatattgattatgatgttgttat 15360904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 191 - 224
Target Start/End: Complemental strand, 38479766 - 38479733
Alignment:
Q  191 atgttgtttatgatattgattctgatgttgttat 224  Q
    ||||||||||||||||||||| ||||||||||||    
T  38479766 atgttgtttatgatattgattatgatgttgttat 38479733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0484 (Bit Score: 161; Significance: 5e-86; HSPs: 1)
Name: scaffold0484
Description:

Target: scaffold0484; HSP #1
Raw Score: 161; E-Value: 5e-86
Query Start/End: Original strand, 20 - 228
Target Start/End: Complemental strand, 385 - 178
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttactgagttgtattctactcatat 119  Q
    ||||| |||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||| |||||||| ||| |    
T  385 ttgtcaagtcaatgtcgttgttgatgaattatcatccatgagttgtcaagttgttaatgaattatcatctatgagttgctgagttttattctacccatgt 286  T
Q  120 gttgttaaagaagtacctatgaagattatacgatgttcatgacgttgtcaaagttgcttatgacgattgctatgttgtttatgatattgattctgatgtt 219  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||| |||||||||||||||||||| |||||||    
T  285 gttgttaaagaagtacctatgaagattatacgatgttcatgatgttgtc-aagttgcttatgacgattgctttgttgtttatgatattgattgtgatgtt 187  T
Q  220 gttatatga 228  Q
    |||||||||    
T  186 gttatatga 178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 157; Significance: 1e-83; HSPs: 29)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 20 - 224
Target Start/End: Complemental strand, 48603006 - 48602804
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttactgagttgtattctactcatat 119  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||| |||||| ||| |    
T  48603006 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagctgttaatgaattatcatctatgagttgctgagttgtcttctacccatgt 48602907  T
Q  120 gttgttaaagaagtacctatgaagattatacgatgttcatgacgttgtcaaagttgcttatgacgattgctatgttgtttatgatattgattctgatgtt 219  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| | |||||||||||||||||||||||||| |||||||    
T  48602906 gttgttaaagaagtacctatgaagattatacgatgttcatgacgttgtc-aagttgcttatgatg-ttgctatgttgtttatgatattgattgtgatgtt 48602809  T
Q  220 gttat 224  Q
     ||||    
T  48602808 attat 48602804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 149; E-Value: 7e-79
Query Start/End: Original strand, 20 - 224
Target Start/End: Original strand, 22131461 - 22131663
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttactgagttgtattctactcatat 119  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||  |||| |||  ||||| ||| |    
T  22131461 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttgatgaattatcatctatgagttgttgagctgtcatctacccatgt 22131560  T
Q  120 gttgttaaagaagtacctatgaagattatacgatgttcatgacgttgtcaaagttgcttatgacgattgctatgttgtttatgatattgattctgatgtt 219  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| | |||||||||||||||||||||||||| |||||||    
T  22131561 gttgttaaagaagtacctatgaagattatacgatgttcatgacgttgtc-aagttgcttatgatg-ttgctatgttgtttatgatattgattatgatgtt 22131658  T
Q  220 gttat 224  Q
    |||||    
T  22131659 gttat 22131663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 20 - 161
Target Start/End: Original strand, 41781879 - 41782020
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttactgagttgtattctactcatat 119  Q
    ||||||||||||||  ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||  |||||||| |||||| ||| |    
T  41781879 ttgtcgagtcaaagctgttgttgatgaattatcatccatgagttgttaagttgttgatgaattatcatctatgagttgttgagttgtcttctacccatgt 41781978  T
Q  120 gttgttaaagaagtacctatgaagattatacgatgttcatga 161  Q
    |||||||||||||||||||||||||||||| |||||| ||||    
T  41781979 gttgttaaagaagtacctatgaagattatatgatgtttatga 41782020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 20 - 160
Target Start/End: Original strand, 41388600 - 41388740
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttactgagttgtattctactcatat 119  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||   ||||||| ||||||  || |    
T  41388600 ttgtcgagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatctatgagttgtcgagttgtcttctacctatgt 41388699  T
Q  120 gttgttaaagaagtacctatgaagattatacgatgttcatg 160  Q
    ||||||||||||||||||| |||||||||||||||||||||    
T  41388700 gttgttaaagaagtacctacgaagattatacgatgttcatg 41388740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 20 - 155
Target Start/End: Original strand, 1925735 - 1925870
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttactgagttgtattctactcatat 119  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||   ||||||| |||||| ||| |    
T  1925735 ttgtcgagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatctatgagttgtcgagttgtcttctacccatgt 1925834  T
Q  120 gttgttaaagaagtacctatgaagattatacgatgt 155  Q
    ||||||||||||||||||| ||||||||||||||||    
T  1925835 gttgttaaagaagtacctacgaagattatacgatgt 1925870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 20 - 155
Target Start/End: Original strand, 20924749 - 20924884
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttactgagttgtattctactcatat 119  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||   ||||||| |||||| ||| |    
T  20924749 ttgtcgagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatctatgagttgtcgagttgtcttctacccatgt 20924848  T
Q  120 gttgttaaagaagtacctatgaagattatacgatgt 155  Q
    ||||||||||||||||||| ||||||||||||||||    
T  20924849 gttgttaaagaagtacctacgaagattatacgatgt 20924884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 20 - 153
Target Start/End: Complemental strand, 33797044 - 33796911
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttactgagttgtattctactcatat 119  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||   ||||||| ||| || ||| |    
T  33797044 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttgataaattatcatctatgagttgtcgagttgtcttccacccatgt 33796945  T
Q  120 gttgttaaagaagtacctatgaagattatacgat 153  Q
    ||| ||||||||||||||||||||||||||||||    
T  33796944 gttattaaagaagtacctatgaagattatacgat 33796911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 20 - 161
Target Start/End: Original strand, 39244500 - 39244641
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttactgagttgtattctactcatat 119  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||    ||||||| ||||||  || |    
T  39244500 ttgtcgagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatctatgagtcgtcgagttgtcttctacctatgt 39244599  T
Q  120 gttgttaaagaagtacctatgaagattatacgatgttcatga 161  Q
    ||||||||||||||||||| ||||||||||||||||| ||||    
T  39244600 gttgttaaagaagtacctacgaagattatacgatgtttatga 39244641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 20 - 161
Target Start/End: Original strand, 39248055 - 39248196
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttactgagttgtattctactcatat 119  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||    ||||||| ||||||  || |    
T  39248055 ttgtcgagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatctatgagtcgtcgagttgtcttctacctatgt 39248154  T
Q  120 gttgttaaagaagtacctatgaagattatacgatgttcatga 161  Q
    ||||||||||||||||||| ||||||||||||||||| ||||    
T  39248155 gttgttaaagaagtacctacgaagattatacgatgtttatga 39248196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 21 - 156
Target Start/End: Original strand, 16376040 - 16376176
Alignment:
Q  21 tgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttact-gagttgtattctactcatat 119  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||  ||||||||||||| |||||||  | ||||||| |||||| ||| |    
T  16376040 tgtcgagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatccatgagtttgtcgagttgtgttctacccatgt 16376139  T
Q  120 gttgttaaagaagtacctatgaagattatacgatgtt 156  Q
    ||||||||||||||||||| |||||||||||||||||    
T  16376140 gttgttaaagaagtacctacgaagattatacgatgtt 16376176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 21 - 155
Target Start/End: Complemental strand, 1010247 - 1010112
Alignment:
Q  21 tgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttact-gagttgtattctactcatat 119  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||  ||||||||||||| |||||||  | ||||||| |||||| ||| |    
T  1010247 tgtcgagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatccatgagtttgtcgagttgtgttctacccatgt 1010148  T
Q  120 gttgttaaagaagtacctatgaagattatacgatgt 155  Q
    ||||||||||||||||||| ||||||||||||||||    
T  1010147 gttgttaaagaagtacctacgaagattatacgatgt 1010112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 21 - 155
Target Start/End: Complemental strand, 52639065 - 52638930
Alignment:
Q  21 tgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttact-gagttgtattctactcatat 119  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||  ||||||||||||| |||||||  | ||||||| |||||| ||| |    
T  52639065 tgtcgagtcaatgtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatccatgagtttgtcgagttgtgttctacccatgt 52638966  T
Q  120 gttgttaaagaagtacctatgaagattatacgatgt 155  Q
    ||||||||||||||||||| ||||||||||||||||    
T  52638965 gttgttaaagaagtacctacgaagattatacgatgt 52638930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 20 - 161
Target Start/End: Original strand, 20229588 - 20229729
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttactgagttgtattctactcatat 119  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||   ||||||| |||  |  || |    
T  20229588 ttgtcgagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatctatgagttgtcgagttgtcttccgcctatgt 20229687  T
Q  120 gttgttaaagaagtacctatgaagattatacgatgttcatga 161  Q
    ||||||||||||||||||| ||||||||||||||||| ||||    
T  20229688 gttgttaaagaagtacctacgaagattatacgatgtttatga 20229729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 20 - 161
Target Start/End: Complemental strand, 21406881 - 21406740
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttactgagttgtattctactcatat 119  Q
    ||||||||| || |||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||| |   ||||||| ||||||  || |    
T  21406881 ttgtcgagttaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatctatgagctgtcgagttgtcttctacctatgt 21406782  T
Q  120 gttgttaaagaagtacctatgaagattatacgatgttcatga 161  Q
    ||||||||||||||||||| ||||||||||||||||| ||||    
T  21406781 gttgttaaagaagtacctacgaagattatacgatgtttatga 21406740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 24 - 167
Target Start/End: Complemental strand, 23967483 - 23967332
Alignment:
Q  24 cgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagtt--------actgagttgtattctactc 115  Q
    ||||||||||||||||||||||| || ||||||||||||||||||||||||  |||||| ||||| |||||||          |||||||| ||||||      
T  23967483 cgagtcaaagtcgttgttgatgagttgtcatccatgagttgttaagttgttgctgaattgtcatccatgagttgttaagtagttgagttgtcttctacat 23967384  T
Q  116 atatgttgttaaagaagtacctatgaagattatacgatgttcatgacgttgt 167  Q
    || ||||||||| ||||||| |||||||||||||||||||| |||| |||||    
T  23967383 atgtgttgttaatgaagtacttatgaagattatacgatgtttatgatgttgt 23967332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 20 - 96
Target Start/End: Complemental strand, 42911894 - 42911818
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagtt 96  Q
    ||||||||||||||||||||||||||| || |||||||||||||||||||||||| ||||||| ||||| |||||||    
T  42911894 ttgtcgagtcaaagtcgttgttgatgagttgtcatccatgagttgttaagttgttgatgaattgtcatccatgagtt 42911818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 20 - 96
Target Start/End: Original strand, 14238695 - 14238775
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattat----catccatgagttgttaagttgttaatgaattatcatctatgagtt 96  Q
    ||||||||||||||||||||||||||||||||    ||||||||||||||||||||||| ||||||||||||| |||||||    
T  14238695 ttgtcgagtcaaagtcgttgttgatgaattatatatcatccatgagttgttaagttgttgatgaattatcatccatgagtt 14238775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 20 - 74
Target Start/End: Complemental strand, 19675596 - 19675542
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgtt 74  Q
    ||||||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  19675596 ttgtcgagtcaaagtcgttgttgatgagttgtcatccatgagttgttaagttgtt 19675542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 26 - 96
Target Start/End: Complemental strand, 48520018 - 48519948
Alignment:
Q  26 agtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagtt 96  Q
    ||||||||| ||||||||||| || |||||||||||||||||||||||| ||||||| ||||| |||||||    
T  48520018 agtcaaagttgttgttgatgagttgtcatccatgagttgttaagttgttgatgaattgtcatccatgagtt 48519948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 20 - 74
Target Start/End: Complemental strand, 20241672 - 20241618
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgtt 74  Q
    ||||||||||||||||||||||||||| || || |||||||||||||||||||||    
T  20241672 ttgtcgagtcaaagtcgttgttgatgagttgtcgtccatgagttgttaagttgtt 20241618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 36 - 74
Target Start/End: Original strand, 14238748 - 14238786
Alignment:
Q  36 gttgttgatgaattatcatccatgagttgttaagttgtt 74  Q
    |||||||||||||||||||||||||||||||||||||||    
T  14238748 gttgttgatgaattatcatccatgagttgttaagttgtt 14238786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 36 - 74
Target Start/End: Complemental strand, 42911845 - 42911807
Alignment:
Q  36 gttgttgatgaattatcatccatgagttgttaagttgtt 74  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  42911845 gttgttgatgaattgtcatccatgagttgttaagttgtt 42911807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 186 - 224
Target Start/End: Complemental strand, 48519720 - 48519682
Alignment:
Q  186 ttgctatgttgtttatgatattgattctgatgttgttat 224  Q
    |||||||||||||||||||||||||| ||||||||||||    
T  48519720 ttgctatgttgtttatgatattgattatgatgttgttat 48519682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 190 - 226
Target Start/End: Original strand, 4597165 - 4597201
Alignment:
Q  190 tatgttgtttatgatattgattctgatgttgttatat 226  Q
    |||||||||||||||||||||| ||||||||||||||    
T  4597165 tatgttgtttatgatattgattatgatgttgttatat 4597201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 36 - 96
Target Start/End: Complemental strand, 48519975 - 48519915
Alignment:
Q  36 gttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagtt 96  Q
    |||||||||||||| ||||||||||||||||| |||||| | || || ||||| |||||||    
T  48519975 gttgttgatgaattgtcatccatgagttgttaggttgttgacgagttgtcatccatgagtt 48519915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 224
Target Start/End: Complemental strand, 48519820 - 48519786
Alignment:
Q  190 tatgttgtttatgatattgattctgatgttgttat 224  Q
    |||||||||||||||||||||| ||||||||||||    
T  48519820 tatgttgtttatgatattgattatgatgttgttat 48519786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 191 - 224
Target Start/End: Complemental strand, 42911754 - 42911721
Alignment:
Q  191 atgttgtttatgatattgattctgatgttgttat 224  Q
    ||||||||||||||||||||| ||||||||||||    
T  42911754 atgttgtttatgatattgattatgatgttgttat 42911721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 191 - 224
Target Start/End: Complemental strand, 48519851 - 48519818
Alignment:
Q  191 atgttgtttatgatattgattctgatgttgttat 224  Q
    ||||||||||||||||||||| ||||||||||||    
T  48519851 atgttgtttatgatattgattatgatgttgttat 48519818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 191 - 224
Target Start/End: Original strand, 51274834 - 51274867
Alignment:
Q  191 atgttgtttatgatattgattctgatgttgttat 224  Q
    ||||||||||||||||||||| ||||||||||||    
T  51274834 atgttgtttatgatattgattatgatgttgttat 51274867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0142 (Bit Score: 149; Significance: 7e-79; HSPs: 1)
Name: scaffold0142
Description:

Target: scaffold0142; HSP #1
Raw Score: 149; E-Value: 7e-79
Query Start/End: Original strand, 20 - 224
Target Start/End: Original strand, 8171 - 8373
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttactgagttgtattctactcatat 119  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| || |||||| |||||| ||| |    
T  8171 ttgtcgagtcaaagtcattgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctttgagttgctaagttgtcttctacccatgt 8270  T
Q  120 gttgttaaagaagtacctatgaagattatacgatgttcatgacgttgtcaaagttgcttatgacgattgctatgttgtttatgatattgattctgatgtt 219  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| | |||||||||||||||||||||||||| |||||||    
T  8271 gttgttaaagaagtacctatgaagattatacgatgttcatgacgttgtc-aagttgcttatgatg-ttgctatgttgtttatgatattgattatgatgtt 8368  T
Q  220 gttat 224  Q
     ||||    
T  8369 attat 8373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 122; Significance: 1e-62; HSPs: 26)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 20 - 224
Target Start/End: Original strand, 44385227 - 44385430
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttactgagttgtattctactcatat 119  Q
    ||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||  |||||||| |||||| ||| |    
T  44385227 ttgtcaagtcaaagtcgttgttgatgaattatcattcatgagttgttaagttgttaatgaattatcatctatgtgttgttgagttgtcttctacccatgt 44385326  T
Q  120 gttgttaaa-gaagtacctatgaagattatacgatgttcatgacgttgtcaaagttgcttatgacgattgctatgttgtttatgatattgattctgatgt 218  Q
    ||| ||||| | ||||||||||||||||||||||||||||||| |||||| ||||||||||||| | ||| |||||||||||||||||||||| ||||||    
T  44385327 gttattaaagggagtacctatgaagattatacgatgttcatgatgttgtc-aagttgcttatgatg-ttgttatgttgtttatgatattgattatgatgt 44385424  T
Q  219 tgttat 224  Q
    | ||||    
T  44385425 ttttat 44385430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 20 - 161
Target Start/End: Original strand, 21828620 - 21828761
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttactgagttgtattctactcatat 119  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||   ||||||| |||||| ||| |    
T  21828620 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatctatgagttgtcgagttgtcttctacccatgt 21828719  T
Q  120 gttgttaaagaagtacctatgaagattatacgatgttcatga 161  Q
    ||||||||||||||||||||||||||||||||||||| ||||    
T  21828720 gttgttaaagaagtacctatgaagattatacgatgtttatga 21828761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 20 - 156
Target Start/End: Original strand, 18863251 - 18863387
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttactgagttgtattctactcatat 119  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||   ||||||| |||||| ||| |    
T  18863251 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatctatgagttgtcgagttgtcttctacccatgt 18863350  T
Q  120 gttgttaaagaagtacctatgaagattatacgatgtt 156  Q
    |||||||||||||||||||||||||||||||||||||    
T  18863351 gttgttaaagaagtacctatgaagattatacgatgtt 18863387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 20 - 155
Target Start/End: Original strand, 30940683 - 30940818
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttactgagttgtattctactcatat 119  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||   ||||||| |||||| ||| |    
T  30940683 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatctatgagttgtcgagttgtcttctacccatgt 30940782  T
Q  120 gttgttaaagaagtacctatgaagattatacgatgt 155  Q
    ||||||||||||||||||| ||||||||||||||||    
T  30940783 gttgttaaagaagtacctacgaagattatacgatgt 30940818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 20 - 161
Target Start/End: Complemental strand, 23913796 - 23913655
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttactgagttgtattctactcatat 119  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||  | | |||| |||||| ||| |    
T  23913796 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttgatgaattatcatctatgagttgttaatttgtcttctacccatgt 23913697  T
Q  120 gttgttaaagaagtacctatgaagattatacgatgttcatga 161  Q
    |||||||||||||||||||||||||||| | |||||| ||||    
T  23913696 gttgttaaagaagtacctatgaagattacatgatgtttatga 23913655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 20 - 161
Target Start/End: Complemental strand, 21386858 - 21386717
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttactgagttgtattctactcatat 119  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| ||||||   ||||||| |||||| ||| |    
T  21386858 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttgataaattatcatctttgagttgtcgagttgtcttctacccatgt 21386759  T
Q  120 gttgttaaagaagtacctatgaagattatacgatgttcatga 161  Q
    |||||||||||||||| ||| |||||||||||||||| ||||    
T  21386758 gttgttaaagaagtacttataaagattatacgatgtttatga 21386717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 20 - 161
Target Start/End: Original strand, 14398429 - 14398568
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttactgagttgtattctactcatat 119  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||  ||||||   ||||||| |||||| ||| |    
T  14398429 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgaattgttaagttgttgatgaattatcatc--tgagttgtcgagttgttttctacccatgt 14398526  T
Q  120 gttgttaaagaagtacctatgaagattatacgatgttcatga 161  Q
    |||||||||||||||| |||||||||||||||||||| ||||    
T  14398527 gttgttaaagaagtacatatgaagattatacgatgtttatga 14398568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 20 - 161
Target Start/End: Complemental strand, 21410450 - 21410309
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttactgagttgtattctactcatat 119  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||  |||| ||||||||||||||||   ||||||| |||||| ||| |    
T  21410450 ttgtcgagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgatttatcatctatgagttgtcgagttgtcttctacccatgt 21410351  T
Q  120 gttgttaaagaagtacctatgaagattatacgatgttcatga 161  Q
    |||||||||||||||||||||| ||||||| |||||| ||||    
T  21410350 gttgttaaagaagtacctatgacgattatatgatgtttatga 21410309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 20 - 161
Target Start/End: Complemental strand, 21804942 - 21804801
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttactgagttgtattctactcatat 119  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||  |||| ||||||||||||||||   ||||||| |||||| ||| |    
T  21804942 ttgtcgagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgatttatcatctatgagttgtcgagttgtcttctacccatgt 21804843  T
Q  120 gttgttaaagaagtacctatgaagattatacgatgttcatga 161  Q
    |||||||||||||||||||||| ||||||| |||||| ||||    
T  21804842 gttgttaaagaagtacctatgacgattatatgatgtttatga 21804801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 21 - 155
Target Start/End: Original strand, 21973163 - 21973298
Alignment:
Q  21 tgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttact-gagttgtattctactcatat 119  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||  ||||||||||||| |||||||  | ||||||| |||||| ||| |    
T  21973163 tgtcgagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatccatgagtttgtcgagttgtgttctacccatgt 21973262  T
Q  120 gttgttaaagaagtacctatgaagattatacgatgt 155  Q
    |||||| |||||||||||||||||||||||||||||    
T  21973263 gttgttgaagaagtacctatgaagattatacgatgt 21973298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 21 - 155
Target Start/End: Original strand, 21977254 - 21977389
Alignment:
Q  21 tgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttact-gagttgtattctactcatat 119  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||  ||||||||||||| |||||||  | ||||||| |||||| ||| |    
T  21977254 tgtcgagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatccatgagtttgtcgagttgtgttctacccatgt 21977353  T
Q  120 gttgttaaagaagtacctatgaagattatacgatgt 155  Q
    |||||| |||||||||||||||||||||||||||||    
T  21977354 gttgttgaagaagtacctatgaagattatacgatgt 21977389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 21 - 155
Target Start/End: Complemental strand, 22111455 - 22111320
Alignment:
Q  21 tgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttact-gagttgtattctactcatat 119  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||  ||||||||||||| |||||||  | ||||| | |||||| ||| |    
T  22111455 tgtcgagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatccatgagtttgtcgagttatgttctacccatgt 22111356  T
Q  120 gttgttaaagaagtacctatgaagattatacgatgt 155  Q
    ||||||||||||||||||| ||||||||||||||||    
T  22111355 gttgttaaagaagtacctacgaagattatacgatgt 22111320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 21 - 155
Target Start/End: Complemental strand, 43251335 - 43251200
Alignment:
Q  21 tgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttact-gagttgtattctactcatat 119  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||  ||||||||||||| |||||||  | ||||||| |||||| ||| |    
T  43251335 tgtcgagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatccatgagtttgtcgagttgtgttctacccatgt 43251236  T
Q  120 gttgttaaagaagtacctatgaagattatacgatgt 155  Q
    ||||||||||||||||||| ||||||| ||||||||    
T  43251235 gttgttaaagaagtacctacgaagattgtacgatgt 43251200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 20 - 142
Target Start/End: Original strand, 16413760 - 16413882
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttactgagttgtattctactcatat 119  Q
    ||||||||||||||||||||||||||||||||||| |||||||| |||||||||| ||||||||||||| |||||||  | |||||| |||||  ||| |    
T  16413760 ttgtcgagtcaaagtcgttgttgatgaattatcatacatgagttattaagttgttgatgaattatcatccatgagttgttaagttgtcttctatccatgt 16413859  T
Q  120 gttgttaaagaagtacctatgaa 142  Q
    || ||||| ||||||| ||||||    
T  16413860 gtagttaatgaagtacttatgaa 16413882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 20 - 96
Target Start/End: Complemental strand, 32121529 - 32121453
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagtt 96  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||| |||||||    
T  32121529 ttgtcgagtcaaagtcgttgttgaggaattatcatccatgagttgttaagttgttgatgaattatcatccatgagtt 32121453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 20 - 96
Target Start/End: Original strand, 42819107 - 42819183
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagtt 96  Q
    |||||||||| |||| ||||||||||| || |||||||||||||||||||||||| |||| || ||||| |||||||    
T  42819107 ttgtcgagtccaagttgttgttgatgagttgtcatccatgagttgttaagttgttgatgagttgtcatccatgagtt 42819183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 36 - 166
Target Start/End: Complemental strand, 5760237 - 5760107
Alignment:
Q  36 gttgttgatgaattatcatccatgagttgttaagttgttaatgaattatc----atctatgagttactgagttgtattctactcatatgttgttaaagaa 131  Q
    |||||||||||||| |||||||||||||||||||||||   ||| |||||    ||| |||||||  | |||||| |||||  ||| ||||||||| |||    
T  5760237 gttgttgatgaattgtcatccatgagttgttaagttgt---tgagttatcttctatccatgagtt-gttagttgtcttctatccatgtgttgttaatgaa 5760142  T
Q  132 gtacctatgaagattatacgatgttcatgacgttg 166  Q
    || | |||||||||||||||||||| |||| ||||    
T  5760141 gtgcttatgaagattatacgatgtttatgatgttg 5760107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 26 - 96
Target Start/End: Complemental strand, 18833161 - 18833091
Alignment:
Q  26 agtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagtt 96  Q
    ||||||||| ||||||||||| || |||||||||||||||||||||||| | || || ||||| |||||||    
T  18833161 agtcaaagttgttgttgatgagttgtcatccatgagttgttaagttgttgacgagttgtcatccatgagtt 18833091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 36 - 74
Target Start/End: Complemental strand, 32121480 - 32121442
Alignment:
Q  36 gttgttgatgaattatcatccatgagttgttaagttgtt 74  Q
    |||||||||||||||||||||||||||||||||||||||    
T  32121480 gttgttgatgaattatcatccatgagttgttaagttgtt 32121442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 76
Target Start/End: Original strand, 19929978 - 19930034
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaa 76  Q
    |||||||||||||||||||||| || | || | ||||||||||||| ||||||||||    
T  19929978 ttgtcgagtcaaagtcgttgttaataagttgttatccatgagttgtcaagttgttaa 19930034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 224
Target Start/End: Complemental strand, 18833020 - 18832974
Alignment:
Q  177 ttatgacgattgctatgttgtttatgatattgattctgatgttgttat 224  Q
    |||||||| ||| |||||||||||||||||||||| ||||||||||||    
T  18833020 ttatgacg-ttgttatgttgtttatgatattgattatgatgttgttat 18832974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 74
Target Start/End: Complemental strand, 37515238 - 37515200
Alignment:
Q  36 gttgttgatgaattatcatccatgagttgttaagttgtt 74  Q
    |||||||||||||| |||| |||||||||||||||||||    
T  37515238 gttgttgatgaattgtcattcatgagttgttaagttgtt 37515200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 74
Target Start/End: Original strand, 42819156 - 42819194
Alignment:
Q  36 gttgttgatgaattatcatccatgagttgttaagttgtt 74  Q
    ||||||||||| || ||||||||||||||||||||||||    
T  42819156 gttgttgatgagttgtcatccatgagttgttaagttgtt 42819194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 191 - 224
Target Start/End: Original strand, 42819247 - 42819280
Alignment:
Q  191 atgttgtttatgatattgattctgatgttgttat 224  Q
    ||||||||||||||||||||| ||||||||||||    
T  42819247 atgttgtttatgatattgattatgatgttgttat 42819280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 226
Target Start/End: Original strand, 21828790 - 21828830
Alignment:
Q  186 ttgctatgttgtttatgatattgattctgatgttgttatat 226  Q
    ||||||||||||||| |||||||||| |||| |||||||||    
T  21828790 ttgctatgttgtttaagatattgattatgatattgttatat 21828830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 226
Target Start/End: Original strand, 30940924 - 30940964
Alignment:
Q  186 ttgctatgttgtttatgatattgattctgatgttgttatat 226  Q
    ||||||||||||||| |||||||||| |||| |||||||||    
T  30940924 ttgctatgttgtttaagatattgattatgatattgttatat 30940964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0575 (Bit Score: 110; Significance: 1e-55; HSPs: 1)
Name: scaffold0575
Description:

Target: scaffold0575; HSP #1
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 20 - 161
Target Start/End: Original strand, 6472 - 6613
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttactgagttgtattctactcatat 119  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||  |||||||| |||||| ||| |    
T  6472 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttgatgaattatcatctatgagttgttgagttgtcttctacccatgt 6571  T
Q  120 gttgttaaagaagtacctatgaagattatacgatgttcatga 161  Q
    |||||||||||||||||||||||||||||| |||||| ||||    
T  6572 gttgttaaagaagtacctatgaagattatatgatgtttatga 6613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 110; Significance: 1e-55; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 20 - 161
Target Start/End: Original strand, 36692 - 36833
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttactgagttgtattctactcatat 119  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||  |||||||| |||||| ||| |    
T  36692 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttgatgaattatcatctatgagttgttgagttgtcttctacccatgt 36791  T
Q  120 gttgttaaagaagtacctatgaagattatacgatgttcatga 161  Q
    |||||||||||||||||||||||||||||| |||||| ||||    
T  36792 gttgttaaagaagtacctatgaagattatatgatgtttatga 36833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 106; Significance: 3e-53; HSPs: 51)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 20 - 161
Target Start/End: Original strand, 22074567 - 22074708
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttactgagttgtattctactcatat 119  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||   ||||| | |||||| ||| |    
T  22074567 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttgatgaattatcatctatgagttgtcgagttatcttctacccatgt 22074666  T
Q  120 gttgttaaagaagtacctatgaagattatacgatgttcatga 161  Q
    ||||||||||||||||||||||||||||||||||||| ||||    
T  22074667 gttgttaaagaagtacctatgaagattatacgatgtttatga 22074708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 20 - 161
Target Start/End: Complemental strand, 23414430 - 23414289
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttactgagttgtattctactcatat 119  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||   ||||||| |||||| ||| |    
T  23414430 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatctatgagttgtcgagttgtcttctacccatgt 23414331  T
Q  120 gttgttaaagaagtacctatgaagattatacgatgttcatga 161  Q
    ||||||||||||||||||||||||||||||||||||| ||||    
T  23414330 gttgttaaagaagtacctatgaagattatacgatgtttatga 23414289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 20 - 146
Target Start/End: Complemental strand, 2076997 - 2076871
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttactgagttgtattctactcatat 119  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||  |||||||| |||||| ||| |    
T  2076997 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatctatgagttgttgagttgtcttctacccatgt 2076898  T
Q  120 gttgttaaagaagtacctatgaagatt 146  Q
    |||||||||||||||||||||||||||    
T  2076897 gttgttaaagaagtacctatgaagatt 2076871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 20 - 161
Target Start/End: Complemental strand, 1644035 - 1643894
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttactgagttgtattctactcatat 119  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||   ||||||| ||| ||  || |    
T  1644035 ttgtcgagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatctatgagttgtcgagttgtcttccacctatgt 1643936  T
Q  120 gttgttaaagaagtacctatgaagattatacgatgttcatga 161  Q
    ||||||||||||||||||| ||||||||||||||||| ||||    
T  1643935 gttgttaaagaagtacctacgaagattatacgatgtttatga 1643894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 20 - 161
Target Start/End: Original strand, 31478565 - 31478706
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttactgagttgtattctactcatat 119  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||   ||||||| ||||||  || |    
T  31478565 ttgtcgagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatctatgagttgtcgagttgtcttctacctatgt 31478664  T
Q  120 gttgttaaagaagtacctatgaagattatacgatgttcatga 161  Q
    |||||||||||||||| || ||||||||||||||||| ||||    
T  31478665 gttgttaaagaagtacatacgaagattatacgatgtttatga 31478706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 21 - 155
Target Start/End: Complemental strand, 11566386 - 11566251
Alignment:
Q  21 tgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttact-gagttgtattctactcatat 119  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||  ||||||||||||| |||||||  | ||||||| |||||| ||| |    
T  11566386 tgtcgagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatccatgagtttgtcgagttgtgttctacccatgt 11566287  T
Q  120 gttgttaaagaagtacctatgaagattatacgatgt 155  Q
    ||||||||||||||||||| ||||||||||||||||    
T  11566286 gttgttaaagaagtacctacgaagattatacgatgt 11566251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 21 - 155
Target Start/End: Original strand, 12619424 - 12619559
Alignment:
Q  21 tgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttact-gagttgtattctactcatat 119  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||  ||||||||||||| |||||||  | ||||||| |||||| ||| |    
T  12619424 tgtcgagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatccatgagtttgtcgagttgtgttctacccatgt 12619523  T
Q  120 gttgttaaagaagtacctatgaagattatacgatgt 155  Q
    ||||||||||||||||||| ||||||||||||||||    
T  12619524 gttgttaaagaagtacctacgaagattatacgatgt 12619559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 21 - 155
Target Start/End: Complemental strand, 22862470 - 22862335
Alignment:
Q  21 tgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttact-gagttgtattctactcatat 119  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||  ||||||||||||| |||||||  | ||||||| |||||| ||| |    
T  22862470 tgtcgagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatccatgagtttgtcgagttgtgttctacccatgt 22862371  T
Q  120 gttgttaaagaagtacctatgaagattatacgatgt 155  Q
    ||||||||||||||||||| ||||||||||||||||    
T  22862370 gttgttaaagaagtacctacgaagattatacgatgt 22862335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 21 - 155
Target Start/End: Complemental strand, 23394592 - 23394457
Alignment:
Q  21 tgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttact-gagttgtattctactcatat 119  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||  ||||||||||||| |||||||  | ||||||| |||||| ||| |    
T  23394592 tgtcgagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatccatgagtttgtcgagttgtgttctacccatgt 23394493  T
Q  120 gttgttaaagaagtacctatgaagattatacgatgt 155  Q
    ||||||||||||||||||| ||||||||||||||||    
T  23394492 gttgttaaagaagtacctacgaagattatacgatgt 23394457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 21 - 155
Target Start/End: Complemental strand, 8243357 - 8243222
Alignment:
Q  21 tgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttact-gagttgtattctactcatat 119  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||  ||||||||||||| |||||||  | ||||||| |||||| ||| |    
T  8243357 tgtcgagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatccatgagtttgtcgagttgtgttctacccatgt 8243258  T
Q  120 gttgttaaagaagtacctatgaagattatacgatgt 155  Q
    ||||||||||||||||||| ||||||| ||||||||    
T  8243257 gttgttaaagaagtacctacgaagattttacgatgt 8243222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 20 - 155
Target Start/End: Complemental strand, 14471738 - 14471603
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttactgagttgtattctactcatat 119  Q
    |||||||||||||||||||||||||||| ||||||| |||||||||||||||||  ||||||||||||| ||||||    ||||||| |||||| ||| |    
T  14471738 ttgtcgagtcaaagtcgttgttgatgaactatcatctatgagttgttaagttgtcgatgaattatcatccatgagtcgtcgagttgtgttctacccatgt 14471639  T
Q  120 gttgttaaagaagtacctatgaagattatacgatgt 155  Q
    ||||||||||||||||||| ||||||||||||||||    
T  14471638 gttgttaaagaagtacctacgaagattatacgatgt 14471603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 21 - 155
Target Start/End: Complemental strand, 23989444 - 23989309
Alignment:
Q  21 tgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttact-gagttgtattctactcatat 119  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||  ||||||||||||| |||||||  | ||||||| |||||| ||| |    
T  23989444 tgtcgagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatccatgagtttgtcgagttgtgttctacccatgt 23989345  T
Q  120 gttgttaaagaagtacctatgaagattatacgatgt 155  Q
    ||||||||||||||||||  ||||||||||||||||    
T  23989344 gttgttaaagaagtacctgcgaagattatacgatgt 23989309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 20 - 161
Target Start/End: Complemental strand, 16623879 - 16623738
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttactgagttgtattctactcatat 119  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||    ||||||| ||||||  || |    
T  16623879 ttgtcgagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatctatgagtcgtcgagttgtcttctacctatgt 16623780  T
Q  120 gttgttaaagaagtacctatgaagattatacgatgttcatga 161  Q
    ||||||||| ||||||||| ||| ||||||||||||| ||||    
T  16623779 gttgttaaaaaagtacctacgaaaattatacgatgtttatga 16623738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 36 - 155
Target Start/End: Complemental strand, 16759746 - 16759626
Alignment:
Q  36 gttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttact-gagttgtattctactcatatgttgttaaagaagta 134  Q
    ||||| ||||||||||||||||| ||||||||||||||  ||||||||||||| |||||||  | ||||||| |||||| ||| ||||||||||||||||    
T  16759746 gttgtcgatgaattatcatccattagttgttaagttgtcgatgaattatcatccatgagtttgtcgagttgtgttctacccatgtgttgttaaagaagta 16759647  T
Q  135 cctatgaagattatacgatgt 155  Q
    |||| ||||||||||||||||    
T  16759646 cctacgaagattatacgatgt 16759626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 21 - 155
Target Start/End: Complemental strand, 19870114 - 19869978
Alignment:
Q  21 tgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttact-gagttgtattct-actcata 118  Q
    ||||||||||| ||||||||||||||||||||||||| |||||||||||||||  ||||||||||||| |||||||  | ||||| | || | || |||     
T  19870114 tgtcgagtcaaggtcgttgttgatgaattatcatccacgagttgttaagttgtcgatgaattatcatccatgagtttgtcgagttatgttataacccatg 19870015  T
Q  119 tgttgttaaagaagtacctatgaagattatacgatgt 155  Q
    |||||||||||||||||||| ||||||||||||||||    
T  19870014 tgttgttaaagaagtacctacgaagattatacgatgt 19869978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 62 - 156
Target Start/End: Complemental strand, 27556159 - 27556065
Alignment:
Q  62 ttgttaagttgttaatgaattatcatctatgagttactgagttgtattctactcatatgttgttaaagaagtacctatgaagattatacgatgtt 156  Q
    ||||||||||| | |||||||||||||||||||||   ||||||| |||||| ||| ||||||||||||||||||||||||||||||||||||||    
T  27556159 ttgttaagttgatgatgaattatcatctatgagttgtcgagttgttttctacccatgtgttgttaaagaagtacctatgaagattatacgatgtt 27556065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 69 - 155
Target Start/End: Complemental strand, 22948592 - 22948506
Alignment:
Q  69 gttgttaatgaattatcatctatgagttactgagttgtattctactcatatgttgttaaagaagtacctatgaagattatacgatgt 155  Q
    |||||| |||||||||||||||||||||   ||||||| |||||| ||| |||||||||||||||||||| ||||||||||||||||    
T  22948592 gttgttgatgaattatcatctatgagttgtcgagttgtcttctacccatgtgttgttaaagaagtacctacgaagattatacgatgt 22948506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 69 - 155
Target Start/End: Complemental strand, 22952548 - 22952462
Alignment:
Q  69 gttgttaatgaattatcatctatgagttactgagttgtattctactcatatgttgttaaagaagtacctatgaagattatacgatgt 155  Q
    |||||| |||||||||||||||||||||   ||||||| |||||| ||| |||||||||||||||||||| ||||||||||||||||    
T  22952548 gttgttgatgaattatcatctatgagttgtcgagttgtcttctacccatgtgttgttaaagaagtacctacgaagattatacgatgt 22952462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 69 - 155
Target Start/End: Complemental strand, 23871036 - 23870950
Alignment:
Q  69 gttgttaatgaattatcatctatgagttactgagttgtattctactcatatgttgttaaagaagtacctatgaagattatacgatgt 155  Q
    |||||| |||||||||||||||||||||   ||||||| |||||| ||| |||||||||||||||||||| ||||||||||||||||    
T  23871036 gttgttgatgaattatcatctatgagttgtcgagttgtcttctacccatgtgttgttaaagaagtacctacgaagattatacgatgt 23870950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 69 - 155
Target Start/End: Complemental strand, 23874992 - 23874906
Alignment:
Q  69 gttgttaatgaattatcatctatgagttactgagttgtattctactcatatgttgttaaagaagtacctatgaagattatacgatgt 155  Q
    |||||| |||||||||||||||||||||   ||||||| |||||| ||| |||||||||||||||||||| ||||||||||||||||    
T  23874992 gttgttgatgaattatcatctatgagttgtcgagttgtcttctacccatgtgttgttaaagaagtacctacgaagattatacgatgt 23874906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 20 - 74
Target Start/End: Complemental strand, 34963123 - 34963069
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgtt 74  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34963123 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgtt 34963069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 20 - 149
Target Start/End: Complemental strand, 22805507 - 22805370
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatg--------agttactgagttgtattct 111  Q
    ||||||||||||||||||||||||||| || |||||||||||||||||||||||| |||| || ||||| |||        ||||  |||||||| ||||    
T  22805507 ttgtcgagtcaaagtcgttgttgatgagttgtcatccatgagttgttaagttgttgatgagttgtcatccatgagtcgttaagttgttgagttgtcttct 22805408  T
Q  112 actcatatgttgttaaagaagtacctatgaagattata 149  Q
    || ||| ||||||||| ||||| | |||||||||||||    
T  22805407 acccatgtgttgttaatgaagtgcttatgaagattata 22805370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 20 - 156
Target Start/End: Original strand, 19774060 - 19774204
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatg--------agttactgagttgtattct 111  Q
    ||||||||||||||||||||||||||| || |||||||||||||||||||||||| | || || ||||| |||        ||||  |||||||| ||||    
T  19774060 ttgtcgagtcaaagtcgttgttgatgacttgtcatccatgagttgttaagttgttgacgagttgtcatccatgagttgttaagttgttgagttgtcttct 19774159  T
Q  112 actcatatgttgttaaagaagtacctatgaagattatacgatgtt 156  Q
    || ||| ||||||||| ||||| | ||||||||||||| ||||||    
T  19774160 acccatgtgttgttaatgaagtgcttatgaagattatatgatgtt 19774204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 20 - 87
Target Start/End: Complemental strand, 23538302 - 23538235
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcat 87  Q
    ||||| ||||||| |||||||||||||||||||||||| |||||||||||||||| ||||||||||||    
T  23538302 ttgtctagtcaaattcgttgttgatgaattatcatccaagagttgttaagttgttgatgaattatcat 23538235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 20 - 74
Target Start/End: Complemental strand, 23992180 - 23992126
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgtt 74  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  23992180 ttgtcgattcaaagtcgttgttgatgaattatcatccatgagttgttaagttgtt 23992126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 20 - 73
Target Start/End: Complemental strand, 17105407 - 17105354
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgt 73  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  17105407 ttgtcgagtcaaagtcgttgttgatgaattgtcatccatgagttgttaagttgt 17105354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 24 - 96
Target Start/End: Complemental strand, 17742923 - 17742851
Alignment:
Q  24 cgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagtt 96  Q
    ||||||||||||||||||||||| || |||||||||||||||||||||||| |||||||  |||| |||||||    
T  17742923 cgagtcaaagtcgttgttgatgagttgtcatccatgagttgttaagttgttgatgaattgacatccatgagtt 17742851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 20 - 96
Target Start/End: Original strand, 19656621 - 19656697
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagtt 96  Q
    ||||||||||||||||||||| ||||| || |||||||||||||||||||||| | ||||||| ||||| |||||||    
T  19656621 ttgtcgagtcaaagtcgttgtcgatgagttgtcatccatgagttgttaagttgatgatgaattctcatccatgagtt 19656697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 20 - 79
Target Start/End: Original strand, 27126606 - 27126665
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatga 79  Q
    ||||||||||||||||||||||||||| || |||||||||||||||||||||||| ||||    
T  27126606 ttgtcgagtcaaagtcgttgttgatgagttgtcatccatgagttgttaagttgttgatga 27126665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 20 - 95
Target Start/End: Original strand, 15705936 - 15706011
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagt 95  Q
    ||||| ||||||| ||||||||||||| || |||||||||||||||||||||||| |||| || ||||| ||||||    
T  15705936 ttgtcaagtcaaattcgttgttgatgagttgtcatccatgagttgttaagttgttgatgagttgtcatccatgagt 15706011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 76 - 155
Target Start/End: Original strand, 18918013 - 18918092
Alignment:
Q  76 atgaattatcatctatgagttactgagttgtattctactcatatgttgttaaagaagtacctatgaagattatacgatgt 155  Q
    ||||||||||||| ||| || |  ||||||| |||||| ||| |||||||||||||||||||| ||||||||||||||||    
T  18918013 atgaattatcatccatgggtgatcgagttgtgttctacccatgtgttgttaaagaagtacctacgaagattatacgatgt 18918092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 31 - 88
Target Start/End: Complemental strand, 16759784 - 16759727
Alignment:
Q  31 aagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatc 88  Q
    |||||||||||||||||||||||||||| || |||||||||||  |||||||||||||    
T  16759784 aagtcgttgttgatgaattatcatccattagctgttaagttgtcgatgaattatcatc 16759727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 21 - 70
Target Start/End: Original strand, 27416508 - 27416557
Alignment:
Q  21 tgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagt 70  Q
    ||||||||| ||||||||||||||||||||||||| ||||||||||||||    
T  27416508 tgtcgagtcgaagtcgttgttgatgaattatcatctatgagttgttaagt 27416557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 20 - 74
Target Start/End: Complemental strand, 7825489 - 7825435
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgtt 74  Q
    ||||||| ||||||||||||||||||| || ||||||| ||||||||||||||||    
T  7825489 ttgtcgaatcaaagtcgttgttgatgagttgtcatccacgagttgttaagttgtt 7825435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 20 - 65
Target Start/End: Complemental strand, 22948608 - 22948563
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgt 65  Q
    |||||||||||| ||||||||||||||||||||||| |||||||||    
T  22948608 ttgtcgagtcaaggtcgttgttgatgaattatcatctatgagttgt 22948563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 20 - 65
Target Start/End: Complemental strand, 22952564 - 22952519
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgt 65  Q
    |||||||||||| ||||||||||||||||||||||| |||||||||    
T  22952564 ttgtcgagtcaaggtcgttgttgatgaattatcatctatgagttgt 22952519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 20 - 65
Target Start/End: Complemental strand, 23871052 - 23871007
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgt 65  Q
    |||||||||||| ||||||||||||||||||||||| |||||||||    
T  23871052 ttgtcgagtcaaggtcgttgttgatgaattatcatctatgagttgt 23871007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 20 - 65
Target Start/End: Complemental strand, 23875008 - 23874963
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgt 65  Q
    |||||||||||| ||||||||||||||||||||||| |||||||||    
T  23875008 ttgtcgagtcaaggtcgttgttgatgaattatcatctatgagttgt 23874963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 36 - 161
Target Start/End: Original strand, 19656762 - 19656888
Alignment:
Q  36 gttgttgatgaattatcatccatgagttgttaagttgttaa--tgaattatcatctatgagttactgagttgtattctactcatatgttgttaaagaagt 133  Q
    |||||||||||||| |||||||||||||| ||||||||| |  ||  || | ||| |||||||  |||||||| |||||   || ||||||||| |||||    
T  19656762 gttgttgatgaattgtcatccatgagttgctaagttgttgagttgtcttct-atccatgagttgttgagttgtcttctatctatgtgttgttaatgaagt 19656860  T
Q  134 acctatgaagattatacgatgttcatga 161  Q
     | |||||||||||||||||||| ||||    
T  19656861 gcttatgaagattatacgatgtttatga 19656888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 95
Target Start/End: Original strand, 15705985 - 15706044
Alignment:
Q  36 gttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagt 95  Q
    ||||||||||| || |||||||||||| ||||||||||| |||| || ||||||||||||    
T  15705985 gttgttgatgagttgtcatccatgagtggttaagttgttgatgagttgtcatctatgagt 15706044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 225
Target Start/End: Complemental strand, 17742665 - 17742613
Alignment:
Q  172 gttgcttatgacgattgctatgttgtttatgatattgattctgatgttgttata 225  Q
    |||| |||||||| ||| |||||||||||||||||||||| |||||||||||||    
T  17742665 gttgattatgacg-ttgttatgttgtttatgatattgattatgatgttgttata 17742613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 53 - 106
Target Start/End: Original strand, 19656746 - 19656799
Alignment:
Q  53 atccatgagttgttaagttgttaatgaattatcatctatgagttactgagttgt 106  Q
    |||||||||||||||||||||| ||||||| ||||| ||||||| || ||||||    
T  19656746 atccatgagttgttaagttgttgatgaattgtcatccatgagttgctaagttgt 19656799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 36 - 96
Target Start/End: Complemental strand, 17742878 - 17742818
Alignment:
Q  36 gttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagtt 96  Q
    ||||||||||||||  |||||||||||||| |||||||| ||||||| || || |||||||    
T  17742878 gttgttgatgaattgacatccatgagttgtaaagttgttgatgaattgtcctccatgagtt 17742818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 59
Target Start/End: Original strand, 18917990 - 18918029
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatg 59  Q
    |||| ||||||||||||||| |||||||||||||||||||    
T  18917990 ttgttgagtcaaagtcgttggtgatgaattatcatccatg 18918029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 228
Target Start/End: Complemental strand, 17105160 - 17105122
Alignment:
Q  190 tatgttgtttatgatattgattctgatgttgttatatga 228  Q
    |||||||||||||||||||||| |||||||||| |||||    
T  17105160 tatgttgtttatgatattgattatgatgttgttttatga 17105122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 74
Target Start/End: Complemental strand, 17742845 - 17742807
Alignment:
Q  36 gttgttgatgaattatcatccatgagttgttaagttgtt 74  Q
    |||||||||||||| || |||||||||||||||||||||    
T  17742845 gttgttgatgaattgtcctccatgagttgttaagttgtt 17742807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 74
Target Start/End: Original strand, 19656695 - 19656733
Alignment:
Q  36 gttgttgatgaattatcatccatgagttgttaagttgtt 74  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  19656695 gttgttgataaattgtcatccatgagttgttaagttgtt 19656733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 36 - 73
Target Start/End: Complemental strand, 23538253 - 23538216
Alignment:
Q  36 gttgttgatgaattatcatccatgagttgttaagttgt 73  Q
    ||||||||||||||||||| || |||||||||||||||    
T  23538253 gttgttgatgaattatcattcaagagttgttaagttgt 23538216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 49
Target Start/End: Complemental strand, 27556188 - 27556159
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaatt 49  Q
    ||||||||||||||||||||||||||||||    
T  27556188 ttgtcgagtcaaagtcgttgttgatgaatt 27556159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 96
Target Start/End: Complemental strand, 20182440 - 20182380
Alignment:
Q  36 gttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagtt 96  Q
    |||||||||||||| ||||||| |||||||| ||||||  ||||||| ||||  |||||||    
T  20182440 gttgttgatgaattgtcatccacgagttgttgagttgtcgatgaattgtcatacatgagtt 20182380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 96
Target Start/End: Original strand, 22153551 - 22153611
Alignment:
Q  36 gttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagtt 96  Q
    |||||||||||||| ||||||| |||||||| ||||||  ||||||| ||||  |||||||    
T  22153551 gttgttgatgaattgtcatccacgagttgttgagttgtcgatgaattgtcatacatgagtt 22153611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 102; Significance: 8e-51; HSPs: 19)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 20 - 161
Target Start/End: Complemental strand, 11230646 - 11230505
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttactgagttgtattctactcatat 119  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||   ||||||| |||||| ||| |    
T  11230646 ttgtcgagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatctatgagttgtcgagttgtcttctacccatgt 11230547  T
Q  120 gttgttaaagaagtacctatgaagattatacgatgttcatga 161  Q
    ||||||||||||||||||||||||||||||||||||| ||||    
T  11230546 gttgttaaagaagtacctatgaagattatacgatgtttatga 11230505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 20 - 153
Target Start/End: Complemental strand, 18355742 - 18355609
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttactgagttgtattctactcatat 119  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||   ||||||| |||||| ||| |    
T  18355742 ttgtcgagtcgaagtcgttgttgatgaattatcatccatgagttgttaagttgttgatgaattatcatctatgagttgtcgagttgtcttctacccatgt 18355643  T
Q  120 gttgttaaagaagtacctatgaagattatacgat 153  Q
    ||||||||||||||||||||||||||||||||||    
T  18355642 gttgttaaagaagtacctatgaagattatacgat 18355609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 20 - 161
Target Start/End: Complemental strand, 11220248 - 11220107
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttactgagttgtattctactcatat 119  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||   ||||||| |||||| ||| |    
T  11220248 ttgtcgagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatctatgagttgacgagttgtcttctacccatgt 11220149  T
Q  120 gttgttaaagaagtacctatgaagattatacgatgttcatga 161  Q
    ||||||||||||||| ||||||||||||||||||||| ||||    
T  11220148 gttgttaaagaagtagctatgaagattatacgatgtttatga 11220107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 20 - 161
Target Start/End: Complemental strand, 11224834 - 11224693
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttactgagttgtattctactcatat 119  Q
    |||||||||||| |||||||||||||||||||||||||||| ||||||||||||  |||||||||||||||||||||   ||||||| |||||| ||| |    
T  11224834 ttgtcgagtcaaggtcgttgttgatgaattatcatccatgatttgttaagttgtcgatgaattatcatctatgagttgtcgagttgtcttctacccatgt 11224735  T
Q  120 gttgttaaagaagtacctatgaagattatacgatgttcatga 161  Q
    ||||||||||||||||||||||||||||||||||||| ||||    
T  11224734 gttgttaaagaagtacctatgaagattatacgatgtttatga 11224693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 20 - 161
Target Start/End: Complemental strand, 11228657 - 11228516
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttactgagttgtattctactcatat 119  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||   ||||||| |||||| ||| |    
T  11228657 ttgtcgagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatctatgagttgacgagttgtcttctacccatgt 11228558  T
Q  120 gttgttaaagaagtacctatgaagattatacgatgttcatga 161  Q
    ||||||||||||||||||| ||||||||||||||||| ||||    
T  11228557 gttgttaaagaagtacctaggaagattatacgatgtttatga 11228516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 21 - 155
Target Start/End: Original strand, 40724198 - 40724332
Alignment:
Q  21 tgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttactgagttgtattctactcatatg 120  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||| |||||||   ||||||| |||||| ||| ||    
T  40724198 tgtcaagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatccatgagttgtcgagttgtgttctacccatgtg 40724297  T
Q  121 ttgttaaagaagtacctatgaagattatacgatgt 155  Q
    |||||||||||||||||| ||||||||||||||||    
T  40724298 ttgttaaagaagtacctacgaagattatacgatgt 40724332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 21 - 156
Target Start/End: Complemental strand, 20295371 - 20295235
Alignment:
Q  21 tgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttact-gagttgtattctactcatat 119  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||  ||||||||||||| |||||||  | ||||||| |||||| ||| |    
T  20295371 tgtcgagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatccatgagtttgtcgagttgtgttctacccatgt 20295272  T
Q  120 gttgttaaagaagtacctatgaagattatacgatgtt 156  Q
    ||||||||||||||||||| |||||||||||||||||    
T  20295271 gttgttaaagaagtacctacgaagattatacgatgtt 20295235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 20 - 161
Target Start/End: Complemental strand, 10752715 - 10752576
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttactgagttgtattctactcatat 119  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||  |||||||||||||  ||||||   ||||||| ||||||  ||||    
T  10752715 ttgtcgagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatc--tgagttgtcgagttgtcttctacctatat 10752618  T
Q  120 gttgttaaagaagtacctatgaagattatacgatgttcatga 161  Q
    |||||||||||||||| || ||||||||||||||||| ||||    
T  10752617 gttgttaaagaagtacatacgaagattatacgatgtttatga 10752576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 20 - 161
Target Start/End: Original strand, 15237416 - 15237556
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttactgagttgtattctactcatat 119  Q
    |||||||||||| |||||||| ||||||||||||||||||||||||||||||||  ||||||||||||||||||||    ||||||| ||||||  || |    
T  15237416 ttgtcgagtcaaggtcgttgt-gatgaattatcatccatgagttgttaagttgtcgatgaattatcatctatgagtcgtcgagttgtcttctacctatgt 15237514  T
Q  120 gttgttaaagaagtacctatgaagattatacgatgttcatga 161  Q
    ||||||||||||||||||| ||||||||||||||||| ||||    
T  15237515 gttgttaaagaagtacctacgaagattatacgatgtttatga 15237556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 20 - 141
Target Start/End: Complemental strand, 11226667 - 11226546
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttactgagttgtattctactcatat 119  Q
    ||||||||||||  ||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||   ||||||| |||||| ||| |    
T  11226667 ttgtcgagtcaagatcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatctatgagttgtcgagttgtcttctacccatgt 11226568  T
Q  120 gttgttaaagaagtacctatga 141  Q
    ||||||||||||||| ||||||    
T  11226567 gttgttaaagaagtagctatga 11226546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 69 - 169
Target Start/End: Original strand, 22108009 - 22108109
Alignment:
Q  69 gttgttaatgaattatcatctatgagttactgagttgtattctactcatatgttgttaaagaagtacctatgaagattatacgatgttcatgacgttgtc 168  Q
    |||||| |||||||||||||||||||||  |||||||| |||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22108009 gttgttgatgaattatcatctatgagttgttgagttgtcttctacccatgtgttgttaaagaagtacctatgaagattatacgatgttcatgacgttgtc 22108108  T
Q  169 a 169  Q
    |    
T  22108109 a 22108109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 69 - 161
Target Start/End: Original strand, 20911531 - 20911623
Alignment:
Q  69 gttgttaatgaattatcatctatgagttactgagttgtattctactcatatgttgttaaagaagtacctatgaagattatacgatgttcatga 161  Q
    |||||| |||||||||||||||| ||||   ||||||| |||||| ||| |||||||||||||||||||||||||||||||||||||| ||||    
T  20911531 gttgttgatgaattatcatctattagttgacgagttgtcttctacccatgtgttgttaaagaagtacctatgaagattatacgatgtttatga 20911623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 69 - 161
Target Start/End: Original strand, 24767898 - 24767990
Alignment:
Q  69 gttgttaatgaattatcatctatgagttactgagttgtattctactcatatgttgttaaagaagtacctatgaagattatacgatgttcatga 161  Q
    |||||| |||||||||||||| ||||||   ||||||| |||||| ||| |||||||||||||||||||||||||||||||||||||| ||||    
T  24767898 gttgttgatgaattatcatctgtgagttgtcgagttgtcttctacccatgtgttgttaaagaagtacctatgaagattatacgatgtttatga 24767990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 69 - 155
Target Start/End: Original strand, 19473315 - 19473401
Alignment:
Q  69 gttgttaatgaattatcatctatgagttactgagttgtattctactcatatgttgttaaagaagtacctatgaagattatacgatgt 155  Q
    |||||| |||||||||||||||||||||   ||||||| |||||| ||| |||||||||||||||||||| ||||||||||||||||    
T  19473315 gttgttgatgaattatcatctatgagttgtcgagttgtcttctacccatgtgttgttaaagaagtacctacgaagattatacgatgt 19473401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 20 - 73
Target Start/End: Original strand, 22107993 - 22108046
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgt 73  Q
    |||||||||||||||||||||||||||||||||||| |||||||||| ||||||    
T  22107993 ttgtcgagtcaaagtcgttgttgatgaattatcatctatgagttgttgagttgt 22108046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 20 - 65
Target Start/End: Original strand, 19473299 - 19473344
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgt 65  Q
    |||||||||||| ||||||||||||||||||||||| |||||||||    
T  19473299 ttgtcgagtcaaggtcgttgttgatgaattatcatctatgagttgt 19473344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 20911515 - 20911559
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttg 64  Q
    |||||||||||||||||||||||||||||||||||| || |||||    
T  20911515 ttgtcgagtcaaagtcgttgttgatgaattatcatctattagttg 20911559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 20 - 74
Target Start/End: Original strand, 33896117 - 33896171
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgtt 74  Q
    |||| |||||||||||||||||||||| || |||||||||||| ||||| |||||    
T  33896117 ttgttgagtcaaagtcgttgttgatgagttgtcatccatgagtcgttaaattgtt 33896171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 65
Target Start/End: Original strand, 24767887 - 24767927
Alignment:
Q  25 gagtcaaagtcgttgttgatgaattatcatccatgagttgt 65  Q
    |||||||||||||||||||||||||||||||  ||||||||    
T  24767887 gagtcaaagtcgttgttgatgaattatcatctgtgagttgt 24767927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 102; Significance: 8e-51; HSPs: 28)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 20 - 161
Target Start/End: Complemental strand, 1282913 - 1282772
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttactgagttgtattctactcatat 119  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||| ||||   ||||||| |||||| ||| |    
T  1282913 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatctataagttgtcgagttgtcttctacccatgt 1282814  T
Q  120 gttgttaaagaagtacctatgaagattatacgatgttcatga 161  Q
    ||||||||||||||||||||||||||||||||||||| ||||    
T  1282813 gttgttaaagaagtacctatgaagattatacgatgtttatga 1282772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 20 - 161
Target Start/End: Complemental strand, 9784535 - 9784394
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttactgagttgtattctactcatat 119  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||  |||||| | |||||| ||| |    
T  9784535 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttgatgaattatcatctatgagttgttgagttttcttctacccatgt 9784436  T
Q  120 gttgttaaagaagtacctatgaagattatacgatgttcatga 161  Q
    |||||||||||||||||||||||| ||||| |||||| ||||    
T  9784435 gttgttaaagaagtacctatgaagtttatatgatgtttatga 9784394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 20 - 161
Target Start/End: Complemental strand, 31344662 - 31344522
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttactgagttgtattctactcatat 119  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||   ||||||| |||||| ||| |    
T  31344662 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgtga-tgaattatcatctatgagttgtcgagttgtcttctacccatgt 31344564  T
Q  120 gttgttaaagaagtacctatgaagattatacgatgttcatga 161  Q
    ||||||||||||||||||||||||||||||||||||| ||||    
T  31344563 gttgttaaagaagtacctatgaagattatacgatgtttatga 31344522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 20 - 155
Target Start/End: Original strand, 41531586 - 41531721
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttactgagttgtattctactcatat 119  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||   ||||||| |||||| ||| |    
T  41531586 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatctatgagttgtcgagttgtcttctacccatgt 41531685  T
Q  120 gttgttaaagaagtacctatgaagattatacgatgt 155  Q
    ||||||||||||||||||| ||||||||||||||||    
T  41531686 gttgttaaagaagtacctacgaagattatacgatgt 41531721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 20 - 155
Target Start/End: Original strand, 30345597 - 30345732
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttactgagttgtattctactcatat 119  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||   ||||||| |||||| ||| |    
T  30345597 ttgtcgagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatctatgagttgtcgagttgtcttctacccatgt 30345696  T
Q  120 gttgttaaagaagtacctatgaagattatacgatgt 155  Q
    ||||||||||||||||||| ||||||||||||||||    
T  30345697 gttgttaaagaagtacctacgaagattatacgatgt 30345732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 21 - 155
Target Start/End: Original strand, 24629061 - 24629196
Alignment:
Q  21 tgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttact-gagttgtattctactcatat 119  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||  ||||||||||||| |||||||  | ||||||| |||||| ||| |    
T  24629061 tgtcgagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatccatgagtttgtcgagttgtgttctacccatgt 24629160  T
Q  120 gttgttaaagaagtacctatgaagattatacgatgt 155  Q
    ||||||||||||||||||| ||||||||||||||||    
T  24629161 gttgttaaagaagtacctacgaagattatacgatgt 24629196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 21 - 155
Target Start/End: Original strand, 27380014 - 27380149
Alignment:
Q  21 tgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttact-gagttgtattctactcatat 119  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||  ||||||||||||| |||||||  | ||||||| |||||| ||| |    
T  27380014 tgtcgagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatccatgagtttgtcgagttgtgttctacccatgt 27380113  T
Q  120 gttgttaaagaagtacctatgaagattatacgatgt 155  Q
    ||||||||||||||||||| ||||||||||||||||    
T  27380114 gttgttaaagaagtacctacgaagattatacgatgt 27380149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 21 - 155
Target Start/End: Original strand, 27384060 - 27384195
Alignment:
Q  21 tgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttact-gagttgtattctactcatat 119  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||  ||||||||||||| |||||||  | ||||||| |||||| ||| |    
T  27384060 tgtcgagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatccatgagtttgtcgagttgtgttctacccatgt 27384159  T
Q  120 gttgttaaagaagtacctatgaagattatacgatgt 155  Q
    ||||||||||||||||||| ||||||||||||||||    
T  27384160 gttgttaaagaagtacctacgaagattatacgatgt 27384195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 21 - 155
Target Start/End: Complemental strand, 27601316 - 27601181
Alignment:
Q  21 tgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttact-gagttgtattctactcatat 119  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||  ||||||||||||| |||||||  | ||||||| |||||| ||| |    
T  27601316 tgtcgagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatccatgagtttgtcgagttgtgttctacccatgt 27601217  T
Q  120 gttgttaaagaagtacctatgaagattatacgatgt 155  Q
    ||||||||||||||||||| ||||||||||||||||    
T  27601216 gttgttaaagaagtacctacgaagattatacgatgt 27601181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 21 - 155
Target Start/End: Original strand, 10102235 - 10102370
Alignment:
Q  21 tgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttact-gagttgtattctactcatat 119  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||  ||||||||||||| |||||||  | ||||||| |||||| ||| |    
T  10102235 tgtcgagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatccatgagtttgtcgagttgtgttctacccatgt 10102334  T
Q  120 gttgttaaagaagtacctatgaagattatacgatgt 155  Q
    || |||||||||||||||| ||||||||||||||||    
T  10102335 gtcgttaaagaagtacctacgaagattatacgatgt 10102370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 21 - 155
Target Start/End: Complemental strand, 24648879 - 24648744
Alignment:
Q  21 tgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttact-gagttgtattctactcatat 119  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||  ||||||||||||| |||||||  | ||||||| |||||| ||| |    
T  24648879 tgtcgagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatccatgagtttgtcgagttgtgttctacccatgt 24648780  T
Q  120 gttgttaaagaagtacctatgaagattatacgatgt 155  Q
    ||||||||||||||||||| ||||||| ||||||||    
T  24648779 gttgttaaagaagtacctacgaagattgtacgatgt 24648744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 20 - 96
Target Start/End: Original strand, 32215396 - 32215472
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagtt 96  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||    
T  32215396 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttgatgaattatcatccatgagtt 32215472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 20 - 113
Target Start/End: Original strand, 12902097 - 12902190
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttactgagttgtattctac 113  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||   ||||||| ||||||    
T  12902097 ttgtcgagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatctatgagttgtcgagttgtcttctac 12902190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 20 - 96
Target Start/End: Complemental strand, 17306331 - 17306255
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagtt 96  Q
    ||||||||||||||||||||||||||| || |||||||||||||||||||||||| |||| || ||||| |||||||    
T  17306331 ttgtcgagtcaaagtcgttgttgatgagttgtcatccatgagttgttaagttgttgatgagttgtcatccatgagtt 17306255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 20 - 67
Target Start/End: Complemental strand, 38967131 - 38967084
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgtta 67  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  38967131 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgtta 38967084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 20 - 74
Target Start/End: Original strand, 28653710 - 28653764
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgtt 74  Q
    ||||||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  28653710 ttgtcgagtcaaagtcgttgttgatgagttgtcatccatgagttgttaagttgtt 28653764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 21 - 74
Target Start/End: Complemental strand, 24515029 - 24514976
Alignment:
Q  21 tgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgtt 74  Q
    |||||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  24515029 tgtcgagtcaaagtcgttgttgatgagttgtcatccatgagttgttaagttgtt 24514976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 20 - 67
Target Start/End: Complemental strand, 24367493 - 24367446
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgtta 67  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||    
T  24367493 ttgtcgagtcaaagtcgttgttgatgaattatcattcatgagttgtta 24367446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 26 - 96
Target Start/End: Complemental strand, 36839042 - 36838972
Alignment:
Q  26 agtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagtt 96  Q
    ||||||||||||||||||||| || |||||||||||||||||||||||| |||| || ||||  |||||||    
T  36839042 agtcaaagtcgttgttgatgagttgtcatccatgagttgttaagttgttgatgagttgtcattcatgagtt 36838972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 36 - 74
Target Start/End: Original strand, 32215445 - 32215483
Alignment:
Q  36 gttgttgatgaattatcatccatgagttgttaagttgtt 74  Q
    |||||||||||||||||||||||||||||||||||||||    
T  32215445 gttgttgatgaattatcatccatgagttgttaagttgtt 32215483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 74
Target Start/End: Complemental strand, 17306282 - 17306244
Alignment:
Q  36 gttgttgatgaattatcatccatgagttgttaagttgtt 74  Q
    ||||||||||| || ||||||||||||||||||||||||    
T  17306282 gttgttgatgagttgtcatccatgagttgttaagttgtt 17306244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 186 - 219
Target Start/End: Complemental strand, 357694 - 357661
Alignment:
Q  186 ttgctatgttgtttatgatattgattctgatgtt 219  Q
    |||||||||||||||||||||||||| |||||||    
T  357694 ttgctatgttgtttatgatattgattatgatgtt 357661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 191 - 224
Target Start/End: Original strand, 7672749 - 7672782
Alignment:
Q  191 atgttgtttatgatattgattctgatgttgttat 224  Q
    ||||||||||||||||||||| ||||||||||||    
T  7672749 atgttgtttatgatattgattatgatgttgttat 7672782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 191 - 224
Target Start/End: Complemental strand, 17306191 - 17306158
Alignment:
Q  191 atgttgtttatgatattgattctgatgttgttat 224  Q
    ||||||||||||||||||||| ||||||||||||    
T  17306191 atgttgtttatgatattgattatgatgttgttat 17306158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 191 - 224
Target Start/End: Original strand, 24866069 - 24866102
Alignment:
Q  191 atgttgtttatgatattgattctgatgttgttat 224  Q
    ||||||||||||||||||||| ||||||||||||    
T  24866069 atgttgtttatgatattgattatgatgttgttat 24866102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 191 - 224
Target Start/End: Original strand, 28653817 - 28653850
Alignment:
Q  191 atgttgtttatgatattgattctgatgttgttat 224  Q
    ||||||||||||||||||||| ||||||||||||    
T  28653817 atgttgtttatgatattgattatgatgttgttat 28653850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 191 - 224
Target Start/End: Complemental strand, 36838908 - 36838875
Alignment:
Q  191 atgttgtttatgatattgattctgatgttgttat 224  Q
    ||||||||||||||||||||| ||||||||||||    
T  36838908 atgttgtttatgatattgattatgatgttgttat 36838875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 226
Target Start/End: Complemental strand, 1282743 - 1282703
Alignment:
Q  186 ttgctatgttgtttatgatattgattctgatgttgttatat 226  Q
    ||||||||||||||| |||||||||| |||| |||||||||    
T  1282743 ttgctatgttgtttaagatattgattatgatattgttatat 1282703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 100; Significance: 1e-49; HSPs: 2)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 20 - 155
Target Start/End: Original strand, 14693 - 14828
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttactgagttgtattctactcatat 119  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||   ||||||| |||||| ||| |    
T  14693 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatctatgagttgtcgagttgtcttctacccatgt 14792  T
Q  120 gttgttaaagaagtacctatgaagattatacgatgt 155  Q
    ||||||||||||||||||||||||||| ||||||||    
T  14793 gttgttaaagaagtacctatgaagattttacgatgt 14828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 226
Target Start/End: Original strand, 14934 - 14974
Alignment:
Q  186 ttgctatgttgtttatgatattgattctgatgttgttatat 226  Q
    ||||||||||||||| |||||||||| |||| |||||||||    
T  14934 ttgctatgttgtttaagatattgattatgatattgttatat 14974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0601 (Bit Score: 99; Significance: 5e-49; HSPs: 2)
Name: scaffold0601
Description:

Target: scaffold0601; HSP #1
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 40 - 182
Target Start/End: Original strand, 8090 - 8231
Alignment:
Q  40 ttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttactgagttgtattctactcatatgttgttaaagaagtacctat 139  Q
    ||||||||||||||||||||||||||||||||||  ||||||| |||||||||||||  |||||||| |||||| ||| |||||||||||||||||||||    
T  8090 ttgatgaattatcatccatgagttgttaagttgtcgatgaattgtcatctatgagttgttgagttgtcttctacccatgtgttgttaaagaagtacctat 8189  T
Q  140 gaagattatacgatgttcatgacgttgtcaaagttgcttatga 182  Q
    ||||||||||||||||||||||||||||  |||||||||||||    
T  8190 gaagattatacgatgttcatgacgttgt-taagttgcttatga 8231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0601; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 20 - 96
Target Start/End: Original strand, 8037 - 8113
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagtt 96  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| |||||||    
T  8037 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagtttttgatgaattatcatccatgagtt 8113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 98; Significance: 2e-48; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 20 - 153
Target Start/End: Original strand, 208194 - 208327
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttactgagttgtattctactcatat 119  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||   || |||| |||||| ||| |    
T  208194 ttgtcaagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttgatgaattatcatctatgagttgtcgacttgtcttctacccatgt 208293  T
Q  120 gttgttaaagaagtacctatgaagattatacgat 153  Q
    ||||||||||||||||||||||||||||||||||    
T  208294 gttgttaaagaagtacctatgaagattatacgat 208327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 98; Significance: 2e-48; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 20 - 153
Target Start/End: Original strand, 189983 - 190116
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttactgagttgtattctactcatat 119  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||   ||||||| |||| | ||| |    
T  189983 ttgtcgagtcaaagtcgttgttgatgaattataatccatgagttgttaagttgttgatgaattatcatctatgagttgtcgagttgtcttcttcccatgt 190082  T
Q  120 gttgttaaagaagtacctatgaagattatacgat 153  Q
    ||||||||||||||||||||||||||||||||||    
T  190083 gttgttaaagaagtacctatgaagattatacgat 190116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1852 (Bit Score: 94; Significance: 5e-46; HSPs: 1)
Name: scaffold1852
Description:

Target: scaffold1852; HSP #1
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 20 - 156
Target Start/End: Original strand, 97 - 234
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttact-gagttgtattctactcata 118  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||  ||||||||||||| |||||||  | ||||||| |||||| |||     
T  97 ttgtcgagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatccatgagtttgtcgagttgtcttctacccatg 196  T
Q  119 tgttgttaaagaagtacctatgaagattatacgatgtt 156  Q
    ||||||||||||||||||||||||||||||||||||||    
T  197 tgttgttaaagaagtacctatgaagattatacgatgtt 234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0200 (Bit Score: 94; Significance: 5e-46; HSPs: 1)
Name: scaffold0200
Description:

Target: scaffold0200; HSP #1
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 20 - 161
Target Start/End: Complemental strand, 11495 - 11354
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttactgagttgtattctactcatat 119  Q
    |||| ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||   ||||||| |||||| ||| |    
T  11495 ttgttgagtcaaagtcattgttgatgaattatcatccatgagttgttaagttgttgatgaattatcatctacgagttgtcgagttgtcttctacccatgt 11396  T
Q  120 gttgttaaagaagtacctatgaagattatacgatgttcatga 161  Q
     |||||||||||||||||||||||||||||||||||| ||||    
T  11395 cttgttaaagaagtacctatgaagattatacgatgtttatga 11354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 94; Significance: 5e-46; HSPs: 3)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 20 - 161
Target Start/End: Original strand, 36570 - 36711
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttactgagttgtattctactcatat 119  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||   ||||||| ||||||  || |    
T  36570 ttgtcgagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatctatgagttgtcgagttgtcttctacctatgt 36669  T
Q  120 gttgttaaagaagtacctatgaagattatacgatgttcatga 161  Q
    ||||||||||||||||||| ||||||||||||||||| ||||    
T  36670 gttgttaaagaagtacctacgaagattatacgatgtttatga 36711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109; HSP #2
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 24 - 96
Target Start/End: Original strand, 1063 - 1135
Alignment:
Q  24 cgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagtt 96  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||| |||| |||||||    
T  1063 cgagtcaatgtcgttgttgatgaattatcatccatgagttgttaagttgttgatgaattaccatccatgagtt 1135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 36 - 74
Target Start/End: Original strand, 1108 - 1146
Alignment:
Q  36 gttgttgatgaattatcatccatgagttgttaagttgtt 74  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  1108 gttgttgatgaattaccatccatgagttgttaagttgtt 1146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 93; Significance: 2e-45; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 20 - 156
Target Start/End: Original strand, 73900 - 74036
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttactgagttgtattctactcatat 119  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||| |||||   ||||||| ||||||  |  |    
T  73900 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatctaagagttgtcgagttgtcttctacctaagt 73999  T
Q  120 gttgttaaagaagtacctatgaagattatacgatgtt 156  Q
    |||||||||||||||||||||||||||||||||||||    
T  74000 gttgttaaagaagtacctatgaagattatacgatgtt 74036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0372 (Bit Score: 88; Significance: 2e-42; HSPs: 1)
Name: scaffold0372
Description:

Target: scaffold0372; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 21 - 155
Target Start/End: Original strand, 5681 - 5816
Alignment:
Q  21 tgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttact-gagttgtattctactcatat 119  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||  ||||||||||||| |||||||  | ||||||| |||||| ||| |    
T  5681 tgtcgagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatccatgagtttgtcgagttgtgttctacccatgt 5780  T
Q  120 gttgttaaagaagtacctatgaagattatacgatgt 155  Q
    ||||||||||||||||||| ||||||||||||||||    
T  5781 gttgttaaagaagtacctacgaagattatacgatgt 5816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349 (Bit Score: 88; Significance: 2e-42; HSPs: 1)
Name: scaffold0349
Description:

Target: scaffold0349; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 21 - 155
Target Start/End: Complemental strand, 11946 - 11811
Alignment:
Q  21 tgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttact-gagttgtattctactcatat 119  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||  ||||||||||||| |||||||  | ||||||| |||||| ||| |    
T  11946 tgtcgagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatccatgagtttgtcgagttgtgttctacccatgt 11847  T
Q  120 gttgttaaagaagtacctatgaagattatacgatgt 155  Q
    ||||||||||||||||||| ||||||||||||||||    
T  11846 gttgttaaagaagtacctacgaagattatacgatgt 11811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 88; Significance: 2e-42; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 21 - 155
Target Start/End: Original strand, 33268 - 33403
Alignment:
Q  21 tgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttact-gagttgtattctactcatat 119  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||  ||||||||||||| |||||||  | ||||||| |||||| ||| |    
T  33268 tgtcgagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatccatgagtttgtcgagttgtgttctacccatgt 33367  T
Q  120 gttgttaaagaagtacctatgaagattatacgatgt 155  Q
    ||||||||||||||||||| ||||||||||||||||    
T  33368 gttgttaaagaagtacctacgaagattatacgatgt 33403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 88; Significance: 2e-42; HSPs: 3)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 21 - 155
Target Start/End: Original strand, 67883 - 68018
Alignment:
Q  21 tgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttact-gagttgtattctactcatat 119  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||  ||||||||||||| |||||||  | ||||||| |||||| ||| |    
T  67883 tgtcgagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatccatgagtttgtcgagttgtgttctacccatgt 67982  T
Q  120 gttgttaaagaagtacctatgaagattatacgatgt 155  Q
    ||||||||||||||||||| ||||||||||||||||    
T  67983 gttgttaaagaagtacctacgaagattatacgatgt 68018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 20 - 96
Target Start/End: Original strand, 19613 - 19689
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagtt 96  Q
    ||||||||| |||||||||||| |||| || |||||||||||||| ||| ||||| |||| || ||||| |||||||    
T  19613 ttgtcgagttaaagtcgttgttaatgagttgtcatccatgagttgctaatttgttgatgagttgtcatccatgagtt 19689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 37 - 74
Target Start/End: Original strand, 19663 - 19700
Alignment:
Q  37 ttgttgatgaattatcatccatgagttgttaagttgtt 74  Q
    |||||||||| || ||||||||||||||||||||||||    
T  19663 ttgttgatgagttgtcatccatgagttgttaagttgtt 19700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0293 (Bit Score: 87; Significance: 7e-42; HSPs: 1)
Name: scaffold0293
Description:

Target: scaffold0293; HSP #1
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 20 - 164
Target Start/End: Original strand, 20785 - 20933
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaag--ttgttaatgaattatcatctatgagttactgagttgtattctactcat 117  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||  || || |||||||||||||||||||||  |||||||| |||||| |||    
T  20785 ttgtcgagtcaaagttgttgttgatgaattatcatccatgagttgttaagtttttttgatgaattatcatctatgagttgttgagttgtcttctacccat 20884  T
Q  118 atgttgtt--aaagaagtacctatgaagattatacgatgttcatgacgt 164  Q
     |||||||  |||||||||||||||||||||||| |||||| |||||||    
T  20885 gtgttgttaaaaagaagtacctatgaagattatatgatgtttatgacgt 20933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 84; Significance: 5e-40; HSPs: 3)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 20 - 155
Target Start/End: Original strand, 66105 - 66240
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttactgagttgtattctactcatat 119  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||  ||||||||||||| ||||||    ||||||| |||||| ||| |    
T  66105 ttgtcgagtcaaagtcgttgtttatgaattatcatccatgagttgttaagttgtcgatgaattatcatccatgagtcgtcgagttgtgttctacccatgt 66204  T
Q  120 gttgttaaagaagtacctatgaagattatacgatgt 155  Q
    ||||||||||||||| ||| ||||||||||||||||    
T  66205 gttgttaaagaagtagctacgaagattatacgatgt 66240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 20 - 155
Target Start/End: Original strand, 62189 - 62324
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttactgagttgtattctactcatat 119  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||  ||||||    ||||||| |||||| ||| |    
T  62189 ttgtcgattcaaagtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatacatgagtcgtcgagttgtgttctacccatgt 62288  T
Q  120 gttgttaaagaagtacctatgaagattatacgatgt 155  Q
    ||||||||||||||| ||| ||||||||||||||||    
T  62289 gttgttaaagaagtagctacgaagattatacgatgt 62324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #3
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 21 - 161
Target Start/End: Complemental strand, 80066 - 79925
Alignment:
Q  21 tgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttact-gagttgtattctactcatat 119  Q
    |||| |||||| |||||||||||||||||||||||||| ||||||||||||||  ||||||||||||| |||||||  | ||||||| ||||||  || |    
T  80066 tgtcaagtcaaggtcgttgttgatgaattatcatccataagttgttaagttgtcgatgaattatcatccatgagtttgtcgagttgtcttctacctatgt 79967  T
Q  120 gttgttaaagaagtacctatgaagattatacgatgttcatga 161  Q
    ||| ||||||||||||||| ||||||||||||||||| ||||    
T  79966 gttattaaagaagtacctacgaagattatacgatgtttatga 79925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 84; Significance: 5e-40; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 21 - 155
Target Start/End: Original strand, 59301 - 59436
Alignment:
Q  21 tgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttact-gagttgtattctactcatat 119  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||  ||||||||||||| |||||||  | ||||||| |||||| ||| |    
T  59301 tgtcgagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatccatgagtttgtcgagttgtgttctacccatgt 59400  T
Q  120 gttgttaaagaagtacctatgaagattatacgatgt 155  Q
    ||||||||||||||||||| || |||||||||||||    
T  59401 gttgttaaagaagtacctacgatgattatacgatgt 59436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0486 (Bit Score: 75; Significance: 1e-34; HSPs: 2)
Name: scaffold0486
Description:

Target: scaffold0486; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 20 - 161
Target Start/End: Complemental strand, 9377 - 9235
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttactgagttgtattctactcatat 119  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| | || ||   ||| ||| || |||  |  |    
T  9377 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttgatgaattatcatccaagaattgtcgagctgtcttatacctaagt 9278  T
Q  120 gttgttaaagaagtacctatgaag-attatacgatgttcatga 161  Q
    |||||||||||||||||||||||| ||||||||||||| ||||    
T  9277 gttgttaaagaagtacctatgaagaattatacgatgtttatga 9235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0486; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 20 - 79
Target Start/End: Complemental strand, 8260 - 8201
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatga 79  Q
    |||||||||| |||||||||||||||| || |||||||||||||||||||||||| ||||    
T  8260 ttgtcgagtctaagtcgttgttgatgagttgtcatccatgagttgttaagttgttgatga 8201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0525 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0525
Description:

Target: scaffold0525; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 20 - 113
Target Start/End: Original strand, 4450 - 4543
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttactgagttgtattctac 113  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||   ||||||| ||||||    
T  4450 ttgtcgagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatctatgagttgtcgagttgtcttctac 4543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0494 (Bit Score: 65; Significance: 1e-28; HSPs: 2)
Name: scaffold0494
Description:

Target: scaffold0494; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 20 - 96
Target Start/End: Original strand, 12705 - 12781
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagtt 96  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||| |||||||    
T  12705 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttgatgtattatcatccatgagtt 12781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0494; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 36 - 74
Target Start/End: Original strand, 12754 - 12792
Alignment:
Q  36 gttgttgatgaattatcatccatgagttgttaagttgtt 74  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  12754 gttgttgatgtattatcatccatgagttgttaagttgtt 12792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0278 (Bit Score: 65; Significance: 1e-28; HSPs: 2)
Name: scaffold0278
Description:

Target: scaffold0278; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 36 - 165
Target Start/End: Complemental strand, 7274 - 7137
Alignment:
Q  36 gttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttact--------gagttgtattctactcatatgttgttaa 127  Q
    |||||||||||||| ||||||||||||||| |||||||| ||||||| |||||||||||||  |        ||||||| | |||| | | |||||||||    
T  7274 gttgttgatgaattgtcatccatgagttgtcaagttgttgatgaattgtcatctatgagttgttaagttgttgagttgtctgctacccctgtgttgttaa 7175  T
Q  128 agaagtacctatgaagattatacgatgttcatgacgtt 165  Q
    ||||||||||||||||||||||||||||||||||||||    
T  7174 agaagtacctatgaagattatacgatgttcatgacgtt 7137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0278; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 23 - 96
Target Start/End: Complemental strand, 7317 - 7247
Alignment:
Q  23 tcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagtt 96  Q
    ||||||||||||||||||||||||||||||||||||||   ||||||||||| ||||||| ||||| |||||||    
T  7317 tcgagtcaaagtcgttgttgatgaattatcatccatga---gttaagttgttgatgaattgtcatccatgagtt 7247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0205 (Bit Score: 65; Significance: 1e-28; HSPs: 3)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 20 - 96
Target Start/End: Complemental strand, 29337 - 29261
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagtt 96  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||| |||||||    
T  29337 ttgtcgagtcaaagtcgttgttgatgaattattatccatgagttgttaagttgttgatgaattatcatccatgagtt 29261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0205; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 36 - 74
Target Start/End: Complemental strand, 29288 - 29250
Alignment:
Q  36 gttgttgatgaattatcatccatgagttgttaagttgtt 74  Q
    |||||||||||||||||||||||||||||||||||||||    
T  29288 gttgttgatgaattatcatccatgagttgttaagttgtt 29250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0205; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 191 - 224
Target Start/End: Complemental strand, 29108 - 29075
Alignment:
Q  191 atgttgtttatgatattgattctgatgttgttat 224  Q
    ||||||||||||||||||||| ||||||||||||    
T  29108 atgttgtttatgatattgattatgatgttgttat 29075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 65; Significance: 1e-28; HSPs: 2)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 20 - 96
Target Start/End: Original strand, 18059 - 18135
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagtt 96  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||| |||||||    
T  18059 ttgtcgagtcaaagtcgttgttgatgaattatcatccttgagttgttaagttgttgatgaattatcatccatgagtt 18135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 36 - 74
Target Start/End: Original strand, 18108 - 18146
Alignment:
Q  36 gttgttgatgaattatcatccatgagttgttaagttgtt 74  Q
    |||||||||||||||||||||||||||||||||||||||    
T  18108 gttgttgatgaattatcatccatgagttgttaagttgtt 18146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0546 (Bit Score: 57; Significance: 6e-24; HSPs: 2)
Name: scaffold0546
Description:

Target: scaffold0546; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 24 - 96
Target Start/End: Complemental strand, 10738 - 10666
Alignment:
Q  24 cgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagtt 96  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||| |||| |||||||    
T  10738 cgagtcaatgtcgttgttgatgaattatcatccatgagttgttaagttgttgatgaattaccatccatgagtt 10666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0546; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 36 - 74
Target Start/End: Complemental strand, 10693 - 10655
Alignment:
Q  36 gttgttgatgaattatcatccatgagttgttaagttgtt 74  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  10693 gttgttgatgaattaccatccatgagttgttaagttgtt 10655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166 (Bit Score: 57; Significance: 6e-24; HSPs: 2)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 69 - 161
Target Start/End: Original strand, 10395 - 10487
Alignment:
Q  69 gttgttaatgaattatcatctatgagttactgagttgtattctactcatatgttgttaaagaagtacctatgaagattatacgatgttcatga 161  Q
    |||||| |||||||||||||| ||||||   ||||||| |||||| ||| |||||||||||||||||||||||||||||||||||||| ||||    
T  10395 gttgttgatgaattatcatctgtgagttgtcgagttgtcttctacccatgtgttgttaaagaagtacctatgaagattatacgatgtttatga 10487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 65
Target Start/End: Original strand, 10384 - 10424
Alignment:
Q  25 gagtcaaagtcgttgttgatgaattatcatccatgagttgt 65  Q
    |||||||||||||||||||||||||||||||  ||||||||    
T  10384 gagtcaaagtcgttgttgatgaattatcatctgtgagttgt 10424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 55; Significance: 9e-23; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 20 - 74
Target Start/End: Complemental strand, 28852 - 28798
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgtt 74  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28852 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgtt 28798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 54; Significance: 4e-22; HSPs: 6)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 23 - 96
Target Start/End: Original strand, 15544 - 15617
Alignment:
Q  23 tcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagtt 96  Q
    |||||| |||||||||||||||||||| |||||||||||||||||||||||| ||||||| ||||| |||||||    
T  15544 tcgagttaaagtcgttgttgatgaattgtcatccatgagttgttaagttgttgatgaattgtcatccatgagtt 15617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 36 - 88
Target Start/End: Original strand, 15689 - 15741
Alignment:
Q  36 gttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatc 88  Q
    |||||||||||||| |||||||||||||||||||||||| ||||||| |||||    
T  15689 gttgttgatgaattgtcatccatgagttgttaagttgttgatgaattgtcatc 15741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 36 - 96
Target Start/End: Original strand, 15590 - 15650
Alignment:
Q  36 gttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagtt 96  Q
    |||||||||||||| |||||||||||||||| ||||||| ||||||| || || |||||||    
T  15590 gttgttgatgaattgtcatccatgagttgtttagttgttcatgaattgtcgtccatgagtt 15650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 36 - 96
Target Start/End: Original strand, 15656 - 15716
Alignment:
Q  36 gttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagtt 96  Q
    |||||||||||||| | |||||||||||||| ||||||| ||||||| ||||| |||||||    
T  15656 gttgttgatgaattgtgatccatgagttgtttagttgttgatgaattgtcatccatgagtt 15716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 36 - 96
Target Start/End: Original strand, 15623 - 15683
Alignment:
Q  36 gttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagtt 96  Q
    |||||| ||||||| || ||||||||||||||||||||| ||||||| | ||| |||||||    
T  15623 gttgttcatgaattgtcgtccatgagttgttaagttgttgatgaattgtgatccatgagtt 15683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 36 - 88
Target Start/End: Original strand, 15722 - 15774
Alignment:
Q  36 gttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatc 88  Q
    |||||||||||||| |||||| |||||||||| |||||| ||||||| |||||    
T  15722 gttgttgatgaattgtcatccgtgagttgttaggttgttgatgaattgtcatc 15774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1662 (Bit Score: 53; Significance: 1e-21; HSPs: 2)
Name: scaffold1662
Description:

Target: scaffold1662; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 20 - 96
Target Start/End: Original strand, 629 - 705
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagtt 96  Q
    ||||||||||||||||||||||||||| || |||||||||||||||||||||||| |||| || ||||| |||||||    
T  629 ttgtcgagtcaaagtcgttgttgatgagttctcatccatgagttgttaagttgttgatgagttgtcatccatgagtt 705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1662; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 74
Target Start/End: Original strand, 678 - 716
Alignment:
Q  36 gttgttgatgaattatcatccatgagttgttaagttgtt 74  Q
    ||||||||||| || ||||||||||||||||||||||||    
T  678 gttgttgatgagttgtcatccatgagttgttaagttgtt 716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0292 (Bit Score: 53; Significance: 1e-21; HSPs: 2)
Name: scaffold0292
Description:

Target: scaffold0292; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 36 - 156
Target Start/End: Complemental strand, 4449 - 4329
Alignment:
Q  36 gttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttactgagttgtattctactcatatgttgttaaagaagtac 135  Q
    ||||||||||| || |||||||||||||||||||||||| |||| || ||||| ||||||   | |||||| |||||| ||| ||||||||| ||||| |    
T  4449 gttgttgatgagttgtcatccatgagttgttaagttgttgatgagttgtcatccatgagtcgttaagttgtcttctacccatgtgttgttaatgaagtgc 4350  T
Q  136 ctatgaagattatacgatgtt 156  Q
     ||||||||||||| ||||||    
T  4349 ttatgaagattatatgatgtt 4329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0292; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 20 - 96
Target Start/End: Complemental strand, 4498 - 4422
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagtt 96  Q
    ||||||||||||| || |||||||||| || |||||||||||||||||||||||| |||| || ||||| |||||||    
T  4498 ttgtcgagtcaaaatcattgttgatgagttgtcatccatgagttgttaagttgttgatgagttgtcatccatgagtt 4422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0203 (Bit Score: 53; Significance: 1e-21; HSPs: 2)
Name: scaffold0203
Description:

Target: scaffold0203; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 20 - 96
Target Start/End: Original strand, 19270 - 19346
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagtt 96  Q
    ||||||||||||| |||||||||||||||| |||||||||||||||||||||||| |||| || ||||| |||||||    
T  19270 ttgtcgagtcaaaatcgttgttgatgaattgtcatccatgagttgttaagttgttgatgagttgtcatccatgagtt 19346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0203; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 74
Target Start/End: Original strand, 19319 - 19357
Alignment:
Q  36 gttgttgatgaattatcatccatgagttgttaagttgtt 74  Q
    ||||||||||| || ||||||||||||||||||||||||    
T  19319 gttgttgatgagttgtcatccatgagttgttaagttgtt 19357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0452 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0452
Description:

Target: scaffold0452; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 20 - 95
Target Start/End: Original strand, 13913 - 13988
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagt 95  Q
    ||||||||||||||||||||||||||| || |||||||||||||||||||||||| |||| || ||||| ||||||    
T  13913 ttgtcgagtcaaagtcgttgttgatgagttgtcatccatgagttgttaagttgttgatgagttgtcatccatgagt 13988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 20 - 96
Target Start/End: Original strand, 63450 - 63526
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagtt 96  Q
    ||||||||||||| |||||||||||||||| ||||||||||||||||||||| || ||||||| ||| | |||||||    
T  63450 ttgtcgagtcaaattcgttgttgatgaattgtcatccatgagttgttaagttcttgatgaattgtcaaccatgagtt 63526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0301 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0301
Description:

Target: scaffold0301; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 20 - 74
Target Start/End: Complemental strand, 10760 - 10706
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgtt 74  Q
    ||||||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  10760 ttgtcgagtcaaagtcgttgttgatgagttgtcatccatgagttgttaagttgtt 10706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 45; Significance: 9e-17; HSPs: 5)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 20 - 96
Target Start/End: Original strand, 20010 - 20086
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagtt 96  Q
    ||||||||| |||||| |||||||||| || |||||||||||||||||||||||| |||| || ||||| |||||||    
T  20010 ttgtcgagtgaaagtcattgttgatgagttgtcatccatgagttgttaagttgttgatgagttgtcatccatgagtt 20086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 24 - 65
Target Start/End: Complemental strand, 7134 - 7093
Alignment:
Q  24 cgagtcaaagtcgttgttgatgaattatcatccatgagttgt 65  Q
    ||||||||||||||||||||||| || |||||||||||||||    
T  7134 cgagtcaaagtcgttgttgatgagttgtcatccatgagttgt 7093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 24 - 65
Target Start/End: Complemental strand, 14253 - 14212
Alignment:
Q  24 cgagtcaaagtcgttgttgatgaattatcatccatgagttgt 65  Q
    ||||||||||||||||||||||| || |||||||||||||||    
T  14253 cgagtcaaagtcgttgttgatgagttgtcatccatgagttgt 14212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 74
Target Start/End: Original strand, 20059 - 20097
Alignment:
Q  36 gttgttgatgaattatcatccatgagttgttaagttgtt 74  Q
    ||||||||||| || ||||||||||||||||||||||||    
T  20059 gttgttgatgagttgtcatccatgagttgttaagttgtt 20097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111; HSP #5
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 191 - 224
Target Start/End: Original strand, 20150 - 20183
Alignment:
Q  191 atgttgtttatgatattgattctgatgttgttat 224  Q
    ||||||||||||||||||||| ||||||||||||    
T  20150 atgttgtttatgatattgattatgatgttgttat 20183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 45; Significance: 9e-17; HSPs: 2)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 24 - 96
Target Start/End: Original strand, 832 - 904
Alignment:
Q  24 cgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagtt 96  Q
    |||||||||||| ||||||||||||| ||||||||||||||||||||| || | ||||| ||||| |||||||    
T  832 cgagtcaaagtctttgttgatgaattgtcatccatgagttgttaagttattgaggaattgtcatccatgagtt 904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 186 - 224
Target Start/End: Original strand, 1016 - 1054
Alignment:
Q  186 ttgctatgttgtttatgatattgattctgatgttgttat 224  Q
    |||||||||||||||||||||||||| ||||||||||||    
T  1016 ttgctatgttgtttatgatattgattatgatgttgttat 1054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 20 - 74
Target Start/End: Original strand, 102305 - 102359
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgtt 74  Q
    ||||| ||||||||||||||||||||| || ||||||||||||||||||||||||    
T  102305 ttgtcaagtcaaagtcgttgttgatgagttgtcatccatgagttgttaagttgtt 102359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 20 - 74
Target Start/End: Complemental strand, 116673 - 116619
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgtt 74  Q
    ||||||||||||||||||||||||||| || |||||||||||| |||||||||||    
T  116673 ttgtcgagtcaaagtcgttgttgatgagttgtcatccatgagtcgttaagttgtt 116619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 20 - 70
Target Start/End: Complemental strand, 70854 - 70804
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagt 70  Q
    |||||||||| ||||||||||||||||||||||||| ||||||||||||||    
T  70854 ttgtcgagtctaagtcgttgttgatgaattatcatctatgagttgttaagt 70804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1633 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold1633
Description:

Target: scaffold1633; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 23 - 95
Target Start/End: Complemental strand, 109 - 37
Alignment:
Q  23 tcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagt 95  Q
    ||||||||| ||||||||| |||| || |||||||||||||||||||||||| |||| || ||||| ||||||    
T  109 tcgagtcaatgtcgttgttcatgagttgtcatccatgagttgttaagttgttgatgagttgtcatccatgagt 37  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 186 - 224
Target Start/End: Complemental strand, 13307 - 13269
Alignment:
Q  186 ttgctatgttgtttatgatattgattctgatgttgttat 224  Q
    |||||||||||||||||||||||||||||||||||||||    
T  13307 ttgctatgttgtttatgatattgattctgatgttgttat 13269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 100 - 161
Target Start/End: Original strand, 51314 - 51375
Alignment:
Q  100 gagttgtattctactcatatgttgttaaagaagtacctatgaagattatacgatgttcatga 161  Q
    ||||||| ||||||  || |||||||||||||||||||| ||||||||||||||||| ||||    
T  51314 gagttgtcttctacctatgtgttgttaaagaagtacctacgaagattatacgatgtttatga 51375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0299 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0299
Description:

Target: scaffold0299; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 20 - 60
Target Start/End: Complemental strand, 6466 - 6426
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatga 60  Q
    |||||||||||||||||||||||||||||||||||| ||||    
T  6466 ttgtcgagtcaaagtcgttgttgatgaattatcatctatga 6426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0073 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0073
Description:

Target: scaffold0073; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 20 - 76
Target Start/End: Complemental strand, 56666 - 56610
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaa 76  Q
    ||||||||||||||||||||| ||| | |||| ||||||||||||| ||||||||||    
T  56666 ttgtcgagtcaaagtcgttgtcgataagttattatccatgagttgtcaagttgttaa 56610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0863 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0863
Description:

Target: scaffold0863; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 191 - 224
Target Start/End: Complemental strand, 670 - 637
Alignment:
Q  191 atgttgtttatgatattgattctgatgttgttat 224  Q
    ||||||||||||||||||||| ||||||||||||    
T  670 atgttgtttatgatattgattatgatgttgttat 637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0359 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0359
Description:

Target: scaffold0359; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 23 - 76
Target Start/End: Complemental strand, 15207 - 15154
Alignment:
Q  23 tcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaa 76  Q
    |||||||||||||||||| ||| | || | ||||||||||||| ||||||||||    
T  15207 tcgagtcaaagtcgttgtcgataagttgttatccatgagttgtcaagttgttaa 15154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 95
Target Start/End: Complemental strand, 20987 - 20943
Alignment:
Q  51 tcatccatgagttgttaagttgttaatgaattatcatctatgagt 95  Q
    |||||||||||||||||||||||| |||| || ||||| ||||||    
T  20987 tcatccatgagttgttaagttgttgatgagttgtcatccatgagt 20943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 76
Target Start/End: Original strand, 166827 - 166883
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaa 76  Q
    ||||||||||||||||||||| ||| | || | ||||||| ||||| ||||||||||    
T  166827 ttgtcgagtcaaagtcgttgtcgataagtttttatccatgcgttgtcaagttgttaa 166883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University