View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3151_2D_low_90 (Length: 224)

Name: NF3151_2D_low_90
Description: NF3151_2D
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3151_2D_low_90
NF3151_2D_low_90
[»] chr6 (29 HSPs)
chr6 (8-219)||(17944102-17944313)
chr6 (41-218)||(4804389-4804566)
chr6 (40-219)||(1249104-1249281)
chr6 (41-219)||(7162024-7162202)
chr6 (45-214)||(12412582-12412751)
chr6 (41-212)||(21159326-21159497)
chr6 (41-184)||(13089706-13089849)
chr6 (43-219)||(27826478-27826654)
chr6 (41-218)||(32737815-32737975)
chr6 (43-215)||(227522-227695)
chr6 (102-219)||(29698103-29698220)
chr6 (52-216)||(30460763-30460930)
chr6 (48-214)||(7215816-7215981)
chr6 (86-168)||(24484870-24484952)
chr6 (45-164)||(13888483-13888603)
chr6 (86-168)||(2142295-2142377)
chr6 (45-117)||(1516168-1516239)
chr6 (45-117)||(1518257-1518328)
chr6 (86-214)||(2800613-2800740)
chr6 (45-117)||(1515503-1515574)
chr6 (140-192)||(1516245-1516297)
chr6 (140-192)||(1518334-1518386)
chr6 (52-109)||(28696624-28696680)
chr6 (134-219)||(28696690-28696775)
chr6 (45-168)||(32253993-32254115)
chr6 (164-214)||(17398774-17398824)
chr6 (45-114)||(17828530-17828598)
chr6 (128-168)||(11180472-11180512)
chr6 (48-104)||(29229149-29229204)
[»] chr5 (36 HSPs)
chr5 (41-219)||(35660566-35660744)
chr5 (41-218)||(32129574-32129751)
chr5 (41-219)||(37266671-37266849)
chr5 (41-219)||(13032059-13032236)
chr5 (48-218)||(4895699-4895869)
chr5 (41-219)||(39902355-39902533)
chr5 (41-219)||(14349744-14349921)
chr5 (43-219)||(11775732-11775909)
chr5 (41-219)||(18625378-18625556)
chr5 (41-215)||(40753119-40753293)
chr5 (41-212)||(34827140-34827310)
chr5 (56-219)||(8440943-8441106)
chr5 (42-215)||(43309062-43309225)
chr5 (101-219)||(4592741-4592858)
chr5 (134-219)||(1475688-1475773)
chr5 (45-208)||(3057367-3057529)
chr5 (64-214)||(3057135-3057284)
chr5 (45-155)||(29340999-29341108)
chr5 (45-193)||(32793340-32793487)
chr5 (86-168)||(36290593-36290675)
chr5 (119-215)||(10173892-10173984)
chr5 (79-168)||(2984385-2984474)
chr5 (92-156)||(43222129-43222193)
chr5 (86-165)||(41660100-41660179)
chr5 (47-169)||(18653351-18653472)
chr5 (86-152)||(27428883-27428949)
chr5 (80-168)||(17247397-17247485)
chr5 (121-188)||(28142812-28142881)
chr5 (45-214)||(31546431-31546599)
chr5 (90-214)||(14688519-14688643)
chr5 (86-167)||(3041309-3041391)
chr5 (94-156)||(35650321-35650383)
chr5 (47-104)||(9460599-9460655)
chr5 (171-215)||(2582434-2582478)
chr5 (100-136)||(3257709-3257745)
chr5 (92-156)||(9465746-9465810)
[»] chr2 (33 HSPs)
chr2 (41-219)||(35316765-35316943)
chr2 (41-219)||(28564831-28565010)
chr2 (43-217)||(13238623-13238797)
chr2 (41-217)||(23259444-23259620)
chr2 (41-193)||(11864843-11864987)
chr2 (41-219)||(45625036-45625197)
chr2 (45-168)||(2063344-2063467)
chr2 (134-219)||(39465715-39465800)
chr2 (64-168)||(21454476-21454578)
chr2 (48-174)||(4446860-4446986)
chr2 (86-168)||(23459848-23459930)
chr2 (145-219)||(41983401-41983474)
chr2 (51-168)||(36929707-36929823)
chr2 (86-168)||(374984-375066)
chr2 (86-167)||(8988847-8988928)
chr2 (145-219)||(374499-374573)
chr2 (86-168)||(30709101-30709183)
chr2 (47-156)||(30857642-30857750)
chr2 (46-122)||(40640706-40640783)
chr2 (154-214)||(2061322-2061382)
chr2 (132-216)||(12949413-12949496)
chr2 (45-168)||(36758823-36758945)
chr2 (45-123)||(38824061-38824140)
chr2 (45-214)||(38397028-38397194)
chr2 (52-155)||(15709772-15709874)
chr2 (48-167)||(15722226-15722344)
chr2 (86-168)||(29188644-29188727)
chr2 (140-219)||(10877642-10877722)
chr2 (45-162)||(19908777-19908892)
chr2 (43-80)||(32009934-32009971)
chr2 (86-151)||(13780506-13780572)
chr2 (79-128)||(3354775-3354824)
chr2 (177-217)||(42075456-42075496)
[»] chr4 (49 HSPs)
chr4 (40-219)||(34778361-34778540)
chr4 (41-219)||(3952127-3952305)
chr4 (41-219)||(19901875-19902053)
chr4 (41-218)||(56558220-56558397)
chr4 (41-219)||(33247087-33247263)
chr4 (41-218)||(5763119-5763296)
chr4 (41-218)||(23610583-23610760)
chr4 (41-217)||(38079677-38079853)
chr4 (41-219)||(18206997-18207175)
chr4 (41-219)||(5416423-5416602)
chr4 (41-219)||(39862457-39862635)
chr4 (41-209)||(33262509-33262677)
chr4 (52-192)||(30567868-30568008)
chr4 (41-219)||(24073557-24073734)
chr4 (41-219)||(12153111-12153272)
chr4 (41-180)||(12312432-12312572)
chr4 (57-219)||(47922052-47922210)
chr4 (119-219)||(12241443-12241543)
chr4 (41-219)||(52018723-52018881)
chr4 (141-219)||(17080697-17080775)
chr4 (45-168)||(47922327-47922451)
chr4 (41-108)||(33524313-33524380)
chr4 (110-215)||(31862246-31862351)
chr4 (152-219)||(12312571-12312638)
chr4 (86-161)||(56269078-56269153)
chr4 (86-168)||(42010108-42010190)
chr4 (86-168)||(56453822-56453904)
chr4 (47-200)||(1871237-1871388)
chr4 (86-168)||(5524438-5524520)
chr4 (45-214)||(23474056-23474224)
chr4 (92-156)||(38865280-38865344)
chr4 (67-156)||(26428971-26429061)
chr4 (86-168)||(37002253-37002335)
chr4 (100-215)||(25442190-25442306)
chr4 (130-214)||(33841850-33841934)
chr4 (119-213)||(3326462-3326557)
chr4 (86-156)||(36688190-36688260)
chr4 (45-162)||(48914480-48914596)
chr4 (49-128)||(34927516-34927596)
chr4 (142-193)||(43447638-43447690)
chr4 (92-168)||(48084533-48084609)
chr4 (45-168)||(36532617-36532738)
chr4 (86-151)||(17493010-17493076)
chr4 (86-168)||(42844189-42844271)
chr4 (89-161)||(1015859-1015931)
chr4 (137-193)||(5817252-5817308)
chr4 (79-151)||(25219003-25219077)
chr4 (152-215)||(26428587-26428650)
chr4 (92-168)||(5261107-5261183)
[»] scaffold0012 (1 HSPs)
scaffold0012 (41-219)||(208003-208181)
[»] chr8 (32 HSPs)
chr8 (41-219)||(30426626-30426804)
chr8 (41-219)||(36991296-36991474)
chr8 (41-219)||(28069659-28069837)
chr8 (41-212)||(40695205-40695375)
chr8 (48-219)||(41511202-41511373)
chr8 (41-219)||(10652574-10652753)
chr8 (41-219)||(10672471-10672647)
chr8 (43-219)||(44859128-44859302)
chr8 (42-219)||(28318854-28319037)
chr8 (76-219)||(24101956-24102099)
chr8 (45-200)||(45113229-45113385)
chr8 (45-216)||(37966405-37966574)
chr8 (45-209)||(6014144-6014309)
chr8 (41-101)||(5033310-5033370)
chr8 (90-214)||(42761660-42761782)
chr8 (86-168)||(26749550-26749632)
chr8 (140-219)||(12177620-12177699)
chr8 (140-219)||(12422048-12422127)
chr8 (168-218)||(5033047-5033097)
chr8 (118-216)||(8412197-8412295)
chr8 (79-161)||(34612562-34612644)
chr8 (86-168)||(1937156-1937239)
chr8 (145-216)||(27490067-27490138)
chr8 (93-132)||(5033111-5033150)
chr8 (52-155)||(18689495-18689597)
chr8 (86-168)||(3763524-3763606)
chr8 (75-117)||(12177572-12177614)
chr8 (75-117)||(12422000-12422042)
chr8 (92-168)||(6399915-6399991)
chr8 (92-168)||(30796269-30796344)
chr8 (86-208)||(36748494-36748611)
chr8 (86-151)||(17867661-17867727)
[»] chr7 (33 HSPs)
chr7 (41-219)||(7362508-7362685)
chr7 (41-219)||(21151092-21151270)
chr7 (41-218)||(9559011-9559188)
chr7 (41-219)||(45260384-45260562)
chr7 (43-219)||(47226035-47226208)
chr7 (41-219)||(16366458-16366636)
chr7 (41-219)||(4888407-4888585)
chr7 (41-219)||(12139268-12139445)
chr7 (41-219)||(44647905-44648082)
chr7 (41-219)||(18198196-18198374)
chr7 (48-219)||(25084690-25084863)
chr7 (45-215)||(33450450-33450621)
chr7 (45-215)||(47500243-47500414)
chr7 (45-184)||(39855775-39855913)
chr7 (48-216)||(29630991-29631156)
chr7 (48-216)||(34985909-34986077)
chr7 (48-156)||(989132-989239)
chr7 (90-215)||(32915903-32916025)
chr7 (43-117)||(47271107-47271180)
chr7 (86-168)||(47799902-47799984)
chr7 (52-214)||(33608845-33609007)
chr7 (92-168)||(19889042-19889118)
chr7 (92-168)||(30588526-30588602)
chr7 (89-156)||(46802336-46802403)
chr7 (128-214)||(40019626-40019712)
chr7 (92-168)||(32916160-32916236)
chr7 (126-193)||(35265211-35265279)
chr7 (86-151)||(19027685-19027751)
chr7 (86-151)||(20726885-20726951)
chr7 (117-178)||(8734502-8734562)
chr7 (120-167)||(11828945-11828992)
chr7 (86-151)||(14696759-14696825)
chr7 (86-132)||(29844318-29844364)
[»] chr1 (34 HSPs)
chr1 (41-219)||(50484326-50484504)
chr1 (41-219)||(12151707-12151885)
chr1 (41-219)||(50294020-50294198)
chr1 (44-219)||(40328216-40328390)
chr1 (41-219)||(23861909-23862091)
chr1 (41-219)||(48327111-48327289)
chr1 (98-219)||(12380924-12381045)
chr1 (98-219)||(12384991-12385112)
chr1 (41-219)||(45977962-45978123)
chr1 (41-114)||(12380834-12380907)
chr1 (41-114)||(12384901-12384974)
chr1 (140-218)||(7841766-7841844)
chr1 (41-128)||(7840636-7840723)
chr1 (89-212)||(24977187-24977310)
chr1 (41-154)||(32361264-32361377)
chr1 (45-215)||(18976265-18976433)
chr1 (86-174)||(39426195-39426283)
chr1 (90-168)||(26860056-26860134)
chr1 (86-168)||(52280041-52280123)
chr1 (93-156)||(24413291-24413354)
chr1 (119-213)||(46608412-46608504)
chr1 (86-168)||(30077646-30077728)
chr1 (140-216)||(2845208-2845285)
chr1 (89-214)||(32887785-32887910)
chr1 (90-193)||(26372219-26372321)
chr1 (151-216)||(40988658-40988723)
chr1 (104-215)||(44483712-44483822)
chr1 (86-214)||(5047383-5047510)
chr1 (41-109)||(30860726-30860794)
chr1 (45-107)||(1228501-1228563)
chr1 (86-151)||(18107323-18107389)
chr1 (144-193)||(45970812-45970861)
chr1 (47-144)||(44239210-44239306)
chr1 (86-151)||(6948832-6948899)
[»] chr3 (30 HSPs)
chr3 (41-219)||(27033591-27033769)
chr3 (41-219)||(2229923-2230101)
chr3 (41-219)||(34373771-34373949)
chr3 (41-219)||(43719904-43720082)
chr3 (41-219)||(19830388-19830567)
chr3 (43-219)||(46167333-46167509)
chr3 (42-216)||(40851716-40851891)
chr3 (58-219)||(34373559-34373720)
chr3 (45-215)||(48084763-48084934)
chr3 (41-143)||(24754673-24754775)
chr3 (41-143)||(24763670-24763772)
chr3 (57-216)||(550790-550948)
chr3 (64-219)||(12402905-12403061)
chr3 (56-209)||(566746-566898)
chr3 (86-168)||(49679272-49679354)
chr3 (86-168)||(31523670-31523752)
chr3 (45-214)||(29586282-29586449)
chr3 (90-168)||(42613071-42613149)
chr3 (45-214)||(33632768-33632935)
chr3 (41-92)||(24647905-24647956)
chr3 (90-164)||(54911649-54911723)
chr3 (140-216)||(52859436-52859513)
chr3 (47-214)||(10474402-10474568)
chr3 (86-168)||(40810357-40810440)
chr3 (121-167)||(34897937-34897983)
chr3 (90-215)||(25285843-25285966)
chr3 (46-154)||(28229365-28229472)
chr3 (90-169)||(1995434-1995513)
chr3 (164-215)||(32577476-32577526)
chr3 (130-214)||(36354309-36354393)
[»] scaffold0035 (1 HSPs)
scaffold0035 (41-219)||(16354-16532)
[»] scaffold0250 (1 HSPs)
scaffold0250 (41-219)||(7087-7269)
[»] scaffold0009 (1 HSPs)
scaffold0009 (45-208)||(6396-6559)
[»] scaffold0008 (1 HSPs)
scaffold0008 (41-219)||(9158-9333)
[»] scaffold0126 (1 HSPs)
scaffold0126 (45-214)||(22404-22572)
[»] scaffold0456 (1 HSPs)
scaffold0456 (41-214)||(13641-13798)
[»] scaffold0006 (1 HSPs)
scaffold0006 (44-219)||(73817-73975)
[»] scaffold0171 (1 HSPs)
scaffold0171 (89-168)||(17311-17390)
[»] scaffold0062 (2 HSPs)
scaffold0062 (52-155)||(58684-58786)
scaffold0062 (48-167)||(70783-70901)
[»] scaffold0664 (1 HSPs)
scaffold0664 (86-151)||(4702-4768)


Alignment Details
Target: chr6 (Bit Score: 188; Significance: 1e-102; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 8 - 219
Target Start/End: Complemental strand, 17944313 - 17944102
Alignment:
Q  8 gtcccacgacgcaggagcggggttatctaaggaggtgaagatcctctccatttggcaaaataaatggagttttgtaagttggagagagatagacacaaaa 107  Q
    ||||||||||| |||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17944313 gtcccacgacgaaggagcggggttatctaagggggtgaagatcctcttcatttggcaaaataaatggagttttgtaagttggagagagatagacacaaaa 17944214  T
Q  108 aatagatggtaggtcctaccactaaatgggttccaccatcattaattatattttactttttccaagattttatgtgtctttatctccccaaattgaagaa 207  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||    
T  17944213 aatagatggtaggtcctaccactaaatgggtcccaccatcattaattatattttactttttccaagattttatgtgtttttatctctccaaattgaagaa 17944114  T
Q  208 atggagaaacac 219  Q
    ||||||||||||    
T  17944113 atggagaaacac 17944102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 41 - 218
Target Start/End: Complemental strand, 4804566 - 4804389
Alignment:
Q  41 ggtgaagatcctctccatttggcaaaataaatggagttttgtaagttggagagagatagacacaaaaaatagatggtaggtcctaccactaaatgggttc 140  Q
    ||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| |    
T  4804566 ggtgaagatcctctccatttggcaaaataaatggagttttacaagttggagagagatagacacaaaaaatagatggtgggtcctaccactaagtgggtcc 4804467  T
Q  141 caccatcattaattatattttactttttccaagattttatgtgtctttatctccccaaattgaagaaatggagaaaca 218  Q
    |||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||||||||||||||||||||||    
T  4804466 caccatcattaattatattttacttttttcaaaattttatgtgtctttatctctccaaattgaagaaatggagaaaca 4804389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 141; E-Value: 4e-74
Query Start/End: Original strand, 40 - 219
Target Start/End: Original strand, 1249104 - 1249281
Alignment:
Q  40 aggtgaagatcctctccatttggcaaaataaatggagttttgtaagttggagagagatagacacaaaaaatagatggtaggtcctaccactaaatgggtt 139  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||  ||||||||||||| |||||||||||||| |||||     
T  1249104 aggtgaagatcctctccatttggcaaaataaatggagttttgtaagttggagagagacagaca--aaaaatagatggtgggtcctaccactaagtgggtc 1249201  T
Q  140 ccaccatcattaattatattttactttttccaagattttatgtgtctttatctccccaaattgaagaaatggagaaacac 219  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||  |||||||||||||||||||||||||    
T  1249202 ccaccatcattaattatattttacttttttcaagattttatgtgtctttatctttccaaattgaagaaatggagaaacac 1249281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 41 - 219
Target Start/End: Complemental strand, 7162202 - 7162024
Alignment:
Q  41 ggtgaagatcctctccatttggcaaaataaatggagttttgtaagttggagagagatagacacaaaaaatagatggtaggtcctaccactaaatgggttc 140  Q
    |||||||||| ||||||||||  |||||||||||||||||| ||||||||||||||||||||||| ||||||||||| |||||||| ||||| ||||| |    
T  7162202 ggtgaagatcatctccatttgataaaataaatggagttttgcaagttggagagagatagacacaagaaatagatggtgggtcctactactaagtgggtcc 7162103  T
Q  141 caccatcattaattatattttactttttccaagattttatgtgtctttatctccccaaattgaagaaatggagaaacac 219  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  7162102 caccatcattaattatattttacttttttcaagattttatgtgtctttatctctccaaattgaagaaatggagaaacac 7162024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 45 - 214
Target Start/End: Complemental strand, 12412751 - 12412582
Alignment:
Q  45 aagatcctctccatttggcaaaataaatggagttttgtaagttggagagagatagacacaaaaaatagatggtaggtcctaccactaaatgggttccacc 144  Q
    |||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||| |||||||||||||| |||||||||||    
T  12412751 aagatcttctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaagaaatagatggtgggtcctaccactaagtgggttccacc 12412652  T
Q  145 atcattaattatattttactttttccaagattttatgtgtctttatctccccaaattgaagaaatggaga 214  Q
    |||||||||||||||||||||||| ||| ||||||||| | |||||||| ||||||||||||||||||||    
T  12412651 atcattaattatattttacttttttcaaaattttatgtatttttatctctccaaattgaagaaatggaga 12412582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 128; E-Value: 2e-66
Query Start/End: Original strand, 41 - 212
Target Start/End: Original strand, 21159326 - 21159497
Alignment:
Q  41 ggtgaagatcctctccatttggcaaaataaatggagttttgtaagttggagagagatagacacaaaaaatagatggtaggtcctaccactaaatgggttc 140  Q
    |||||||||||||||||||||  |||||||||| ||||||| |||||||||||| |||||||||||||||||||||| |||||||||||||| ||||| |    
T  21159326 ggtgaagatcctctccatttgttaaaataaatgaagttttgcaagttggagagaaatagacacaaaaaatagatggtgggtcctaccactaagtgggtcc 21159425  T
Q  141 caccatcattaattatattttactttttccaagattttatgtgtctttatctccccaaattgaagaaatgga 212  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||| || ||||||||||||||||||    
T  21159426 caccatcattaattatattttacttttttcaagattttatgtgtctttatatctccaaattgaagaaatgga 21159497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 41 - 184
Target Start/End: Original strand, 13089706 - 13089849
Alignment:
Q  41 ggtgaagatcctctccatttggcaaaataaatggagttttgtaagttggagagagatagacacaaaaaatagatggtaggtcctaccactaaatgggttc 140  Q
    |||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||| ||||||||| |||||||||||||| ||||  |    
T  13089706 ggtgaagatcctctccatttggcaaaataaatggtgttttgcaagttggagagagatagacacaaaatatagatggtgggtcctaccactaagtgggccc 13089805  T
Q  141 caccatcattaattatattttactttttccaagattttatgtgt 184  Q
    |||||||||||||||||||||| ||||| ||| |||||||||||    
T  13089806 caccatcattaattatattttatttttttcaaaattttatgtgt 13089849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 43 - 219
Target Start/End: Complemental strand, 27826654 - 27826478
Alignment:
Q  43 tgaagatcctctccatttggcaaaataaatggagttttgtaagttggagagagatagacacaaaaaatagatggtaggtcctaccactaaatgggttcca 142  Q
    |||||||||||||||||||| ||||||| || || |||| ||| | ||||||||||||||||||||||||||||| |||||||||||||| ||||| |||    
T  27826654 tgaagatcctctccatttggtaaaataactgaagatttgcaaggttgagagagatagacacaaaaaatagatggtgggtcctaccactaagtgggtccca 27826555  T
Q  143 ccatcattaattatattttactttttccaagattttatgtgtctttatctccccaaattgaagaaatggagaaacac 219  Q
    |||||||||||||||||||| |||||  ||  ||||||||||||||||||| | |||| |||||||| |||||||||    
T  27826554 ccatcattaattatattttattttttaaaattttttatgtgtctttatctctcaaaatggaagaaattgagaaacac 27826478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 41 - 218
Target Start/End: Complemental strand, 32737975 - 32737815
Alignment:
Q  41 ggtgaagatcctctccatttggcaaaataaatggagttttgtaagttggagagagatagacacaaaaaatagatggtaggtcctaccactaaatgggttc 140  Q
    |||||||||||||||||||||||||||||||| |||||||| | |||||||||||||||||||||||||||||||||                 ||||||    
T  32737975 ggtgaagatcctctccatttggcaaaataaatagagttttgcaggttggagagagatagacacaaaaaatagatggt-----------------gggttc 32737893  T
Q  141 caccatcattaattatattttactttttccaagattttatgtgtctttatctccccaaattgaagaaatggagaaaca 218  Q
    |||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||||||||||||||||||||||    
T  32737892 caccatcattaattatattttacttttttcaaaattttatgtgtctttatctctccaaattgaagaaatggagaaaca 32737815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 43 - 215
Target Start/End: Original strand, 227522 - 227695
Alignment:
Q  43 tgaagatcctctccatttggcaaaataaatggagttttgtaagttggagagagatagacacaaaa-aatagatggtaggtcctaccactaaatgggttcc 141  Q
    |||||||||||||||||||  |||||||||||||||||| |  |||||||||||||||||||||| |||||||||| |||||||||||||| ||| | ||    
T  227522 tgaagatcctctccatttgctaaaataaatggagttttgcattttggagagagatagacacaaaagaatagatggtgggtcctaccactaagtggatccc 227621  T
Q  142 accatcattaattatattttactttttccaagattttatgtgtctttatctccccaaattgaagaaatggagaa 215  Q
    | ||||||| ||||| |||||| |||| ||| | ||| ||||||| |||||| |||||||| ||||||||||||    
T  227622 atcatcattgattattttttacctttttcaaaactttgtgtgtctatatctctccaaattgtagaaatggagaa 227695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 102 - 219
Target Start/End: Complemental strand, 29698220 - 29698103
Alignment:
Q  102 acaaaaaatagatggtaggtcctaccactaaatgggttccaccatcattaattatattttactttttccaagattttatgtgtctttatctccccaaatt 201  Q
    |||||||||||||||| | |||||||| ||| ||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||| || |||||||    
T  29698220 acaaaaaatagatggtggatcctaccattaagtgggtcccaccatcattaattatattttacttttttcaagattttatgtgtctttatttctccaaatt 29698121  T
Q  202 gaagaaatggagaaacac 219  Q
    ||||||||||||||||||    
T  29698120 gaagaaatggagaaacac 29698103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 52 - 216
Target Start/End: Complemental strand, 30460930 - 30460763
Alignment:
Q  52 tctccatttggcaaaataaatggagttttgtaagttggagagagatagacacaaaaaatagatggtaggtcc----taccactaaatgggttccaccatc 147  Q
    |||||||||| ||||||||||||||||| | || ||||||| ||||||||||||||| ||| || | | |||    ||||| |||||| || || || |     
T  30460930 tctccatttgacaaaataaatggagttt-gcaatttggagaaagatagacacaaaaagtagttgatggatccatcctaccattaaatgagtcccgccgtt 30460832  T
Q  148 attaattatattttactttttccaagattttatgtgtctttatctccccaaattgaagaaatggagaaa 216  Q
    ||||||||||||||||||||| |||||||||||||||||||||||| |||||| ||||||||| |||||    
T  30460831 attaattatattttacttttttcaagattttatgtgtctttatctctccaaatagaagaaatgaagaaa 30460763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 48 - 214
Target Start/End: Original strand, 7215816 - 7215981
Alignment:
Q  48 atcctctccatttggcaaaataaatggagttttgtaagttggagagagatagacacaaaaaatagatggtaggtcctaccactaaatgggttccaccatc 147  Q
    ||||||||||||||  ||||||||||||  |    || ||||||||||||||||||| ||||||||| || |||||||||||||| ||||| |||| |||    
T  7215816 atcctctccatttgataaaataaatggaagtgcacaatttggagagagatagacacataaaatagatagtgggtcctaccactaattgggtcccactatc 7215915  T
Q  148 attaattatattttactttttccaagattttatgtgtctttatctccccaaattgaagaaatggaga 214  Q
    ||||||||  |||||||||||| ||||   | || |||| |||||| ||||| ||||||||||||||    
T  7215916 attaattacgttttactttttctaagaaaatttgagtctatatctctccaaa-tgaagaaatggaga 7215981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 86 - 168
Target Start/End: Complemental strand, 24484952 - 24484870
Alignment:
Q  86 ttggagagagatagacacaaaaaatagatggtaggtcctaccactaaatgggttccaccatcattaattatattttacttttt 168  Q
    ||||||||||||||||||||||||||  |||| ||||||| |||||| ||||| ||||||||||||||||| |||||||||||    
T  24484952 ttggagagagatagacacaaaaaataagtggtgggtcctatcactaagtgggtcccaccatcattaattattttttacttttt 24484870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 45 - 164
Target Start/End: Original strand, 13888483 - 13888603
Alignment:
Q  45 aagatcctctccatttggcaaaataaatggagttttgtaagttggagagagatagacacaaaa-aatagatggtaggtcctaccactaaatgggttccac 143  Q
    ||||||||||| || ||  ||||||||| |||||||| || ||||||||||||| |||||||| |||||||||| | |||||||| ||| ||||| |||     
T  13888483 aagatcctctcaatatgctaaaataaatagagttttgcaatttggagagagatatacacaaaataatagatggtggttcctaccattaactgggtcccat 13888582  T
Q  144 catcattaattatattttact 164  Q
    ||||||||||||| |||||||    
T  13888583 catcattaattattttttact 13888603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 86 - 168
Target Start/End: Original strand, 2142295 - 2142377
Alignment:
Q  86 ttggagagagatagacacaaaaaatagatggtaggtcctaccactaaatgggttccaccatcattaattatattttacttttt 168  Q
    ||||||||||||||||||||||||||  |||| ||||| | || ||  ||||||||||||||||||||||| |||||||||||    
T  2142295 ttggagagagatagacacaaaaaataagtggtgggtcccatcattaggtgggttccaccatcattaattattttttacttttt 2142377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 45 - 117
Target Start/End: Original strand, 1516168 - 1516239
Alignment:
Q  45 aagatcctctccatttggcaaaataaatggagttttgtaagttggagagagatagacacaaaaaatagatggt 117  Q
    |||||||| ||||||||||||||||||||||| |||| || |||||||||||| || ||||||||||||||||    
T  1516168 aagatcctatccatttggcaaaataaatggag-tttgcaatttggagagagatggatacaaaaaatagatggt 1516239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 45 - 117
Target Start/End: Original strand, 1518257 - 1518328
Alignment:
Q  45 aagatcctctccatttggcaaaataaatggagttttgtaagttggagagagatagacacaaaaaatagatggt 117  Q
    |||||||| ||||||||||||||||||||||| |||| || |||||||||||| || ||||||||||||||||    
T  1518257 aagatcctatccatttggcaaaataaatggag-tttgcaatttggagagagatggatacaaaaaatagatggt 1518328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 86 - 214
Target Start/End: Original strand, 2800613 - 2800740
Alignment:
Q  86 ttggagagagatagacacaaaaaatagatggtaggtcctaccactaaatgggttccaccatcattaattatattttactttttccaagattttatgtgtc 185  Q
    ||||||||||||||||||| ||||||||| || | || ||||| ||| ||||| ||||||||||| ||||| ||||||||||| |||  |||| || ||     
T  2800613 ttggagagagatagacacataaaatagatagtggatcataccattaagtgggtcccaccatcattgattattttttacttttttcaattttttttgagtt 2800712  T
Q  186 tttatctccccaaattgaagaaatggaga 214  Q
    | |||||| ||||| || |||||||||||    
T  2800713 tatatctctccaaa-tggagaaatggaga 2800740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 45 - 117
Target Start/End: Original strand, 1515503 - 1515574
Alignment:
Q  45 aagatcctctccatttggcaaaataaatggagttttgtaagttggagagagatagacacaaaaaatagatggt 117  Q
    |||||||| || |||||||||||||||||||| |||| || |||||||||||| || | ||||||||||||||    
T  1515503 aagatcctatcaatttggcaaaataaatggag-tttgcaatttggagagagatggataaaaaaaatagatggt 1515574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 140 - 192
Target Start/End: Original strand, 1516245 - 1516297
Alignment:
Q  140 ccaccatcattaattatattttactttttccaagattttatgtgtctttatct 192  Q
    |||||||||||||||||||||||||||||  || ||||||||||| |||||||    
T  1516245 ccaccatcattaattatattttactttttttaaaattttatgtgtatttatct 1516297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 140 - 192
Target Start/End: Original strand, 1518334 - 1518386
Alignment:
Q  140 ccaccatcattaattatattttactttttccaagattttatgtgtctttatct 192  Q
    |||||||||||||||||||||||||||||  || ||||||||||| |||||||    
T  1518334 ccaccatcattaattatattttactttttttaaaattttatgtgtatttatct 1518386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 52 - 109
Target Start/End: Original strand, 28696624 - 28696680
Alignment:
Q  52 tctccatttggcaaaataaatggagttttgtaagttggagagagatagacacaaaaaa 109  Q
    ||||||||||||||||||||| ||| |||| || ||||||||||||||||| ||||||    
T  28696624 tctccatttggcaaaataaattgag-tttgcaatttggagagagatagacaaaaaaaa 28696680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 134 - 219
Target Start/End: Original strand, 28696690 - 28696775
Alignment:
Q  134 tgggttccaccatcattaattatattttactttttccaagattttatgtgtctttatctccccaaattgaagaaatggagaaacac 219  Q
    |||||||||| |||||||||||| || | ||||||| ||  |||| |||||||||||||| ||||||   ||||||||||| ||||    
T  28696690 tgggttccacgatcattaattattttattctttttctaaacttttttgtgtctttatctctccaaatgatagaaatggagagacac 28696775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 45 - 168
Target Start/End: Original strand, 32253993 - 32254115
Alignment:
Q  45 aagatcctctccatttggcaaaataaatggagttttgtaagttggagagagatagacacaaaaaatagatggtaggtcctaccactaaatgggttccacc 144  Q
    |||||||||||||||||  |||||||||| |   | || | |||||| |||||||||| |||||| || |||| ||||||| || ||| || || ||||     
T  32253993 aagatcctctccatttgtaaaaataaatgaaagat-gtcatttggagggagatagacaaaaaaaaaaggtggtgggtcctatcattaagtgagtcccact 32254091  T
Q  145 atcattaattatattttacttttt 168  Q
    |||||||||||| ||||| |||||    
T  32254092 atcattaattattttttatttttt 32254115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 214
Target Start/End: Original strand, 17398774 - 17398824
Alignment:
Q  164 tttttccaagattttatgtgtctttatctccccaaattgaagaaatggaga 214  Q
    ||||| |||||||||||||||||||||||| |||||| || |||| |||||    
T  17398774 ttttttcaagattttatgtgtctttatctctccaaatggaggaaagggaga 17398824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 45 - 114
Target Start/End: Original strand, 17828530 - 17828598
Alignment:
Q  45 aagatcctctccatttggcaaaataaatggagttttgtaagttggagagagatagacacaaaaaatagat 114  Q
    |||||||||| ||||||| | ||||| |||||| | | || ||||||||||||||||||| |||||||||    
T  17828530 aagatcctctacatttggtataataattggagtat-gcaatttggagagagatagacacataaaatagat 17828598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 168
Target Start/End: Original strand, 11180472 - 11180512
Alignment:
Q  128 actaaatgggttccaccatcattaattatattttacttttt 168  Q
    ||||| ||| ||||||||||||||||||| |||||||||||    
T  11180472 actaagtggattccaccatcattaattattttttacttttt 11180512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 104
Target Start/End: Complemental strand, 29229204 - 29229149
Alignment:
Q  48 atcctctccatttggcaaaataaatggagttttgtaagttggagagagatagacaca 104  Q
    ||||||||||||||| | ||||||||||| | || || |||||||||||||||||||    
T  29229204 atcctctccatttggtataataaatggag-tatgcaatttggagagagatagacaca 29229149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 151; Significance: 5e-80; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 41 - 219
Target Start/End: Original strand, 35660566 - 35660744
Alignment:
Q  41 ggtgaagatcctctccatttggcaaaataaatggagttttgtaagttggagagagatagacacaaaaaatagatggtaggtcctaccactaaatgggttc 140  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| |    
T  35660566 ggtgaagatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtgggtcctaccactaagtgggtcc 35660665  T
Q  141 caccatcattaattatattttactttttccaagattttatgtgtctttatctccccaaattgaagaaatggagaaacac 219  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  35660666 caccatcattaattatattttacttttttcaagattttatgtgtctttatctctccaaattgaagaaacggagaaacac 35660744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 41 - 218
Target Start/End: Original strand, 32129574 - 32129751
Alignment:
Q  41 ggtgaagatcctctccatttggcaaaataaatggagttttgtaagttggagagagatagacacaaaaaatagatggtaggtcctaccactaaatgggttc 140  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||| |||||||||||||| ||||| |    
T  32129574 ggtgaagatcctctccatttggcaaaataaatggagttttataagttggagagagatagacaccaaaaatagatggtgggtcctaccactaagtgggtcc 32129673  T
Q  141 caccatcattaattatattttactttttccaagattttatgtgtctttatctccccaaattgaagaaatggagaaaca 218  Q
    |||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||||||||||||||||||||||    
T  32129674 caccatcattaattatattttacttttttcaaaattttatgtgtctttatctctccaaattgaagaaatggagaaaca 32129751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 41 - 219
Target Start/End: Complemental strand, 37266849 - 37266671
Alignment:
Q  41 ggtgaagatcctctccatttggcaaaataaatggagttttgtaagttggagagagatagacacaaaaaatagatggtaggtcctaccactaaatgggttc 140  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||| ||||||||| ||||| |    
T  37266849 ggtgaagatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtgggtcataccactaagtgggtcc 37266750  T
Q  141 caccatcattaattatattttactttttccaagattttatgtgtctttatctccccaaattgaagaaatggagaaacac 219  Q
    |||||||||||||||||||||| ||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||    
T  37266749 caccatcattaattatattttagttttttcaagattttatgtgtctttatctctccaaattgaagaaatggaaaaacac 37266671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 41 - 219
Target Start/End: Complemental strand, 13032236 - 13032059
Alignment:
Q  41 ggtgaagatcctctccatttggcaaaataaatggagttttgtaagttggagagagatagacacaaaaaatagatggtaggtcctaccactaaatgggttc 140  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||  ||||||||||||||||||| |    
T  13032236 ggtgaagatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaagaaatagatggtgagtcctaccactaaatgggtcc 13032137  T
Q  141 caccatcattaattatattttactttttccaagattttatgtgtctttatctccccaaattgaagaaatggagaaacac 219  Q
    |||||||||||||||||||||| |||||  ||||||||||||||||||||||| |||||||||||||||||||||||||    
T  13032136 caccatcattaattatatttta-tttttttaagattttatgtgtctttatctctccaaattgaagaaatggagaaacac 13032059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 48 - 218
Target Start/End: Original strand, 4895699 - 4895869
Alignment:
Q  48 atcctctccatttggcaaaataaatggagttttgtaagttggagagagatagacacaaaaaatagatggtaggtcctaccactaaatgggttccaccatc 147  Q
    |||||||  ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| ||||||||    
T  4895699 atcctctttatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtgggtcctaccactaagtgggtcccaccatc 4895798  T
Q  148 attaattatattttactttttccaagattttatgtgtctttatctccccaaattgaagaaatggagaaaca 218  Q
    ||||||||||||||||||||| ||| |||||||||||||||||||| ||||||||||||||||||||||||    
T  4895799 attaattatattttacttttttcaaaattttatgtgtctttatctctccaaattgaagaaatggagaaaca 4895869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 41 - 219
Target Start/End: Complemental strand, 39902533 - 39902355
Alignment:
Q  41 ggtgaagatcctctccatttggcaaaataaatggagttttgtaagttggagagagatagacacaaaaaatagatggtaggtcctaccactaaatgggttc 140  Q
    ||||||| ||||||||||||| ||||||||||||||||||  |||||||||||||||| |||||| ||||||||||| |||||||||||||||||| |||    
T  39902533 ggtgaagttcctctccatttgacaaaataaatggagttttacaagttggagagagataaacacaagaaatagatggtgggtcctaccactaaatggattc 39902434  T
Q  141 caccatcattaattatattttactttttccaagattttatgtgtctttatctccccaaattgaagaaatggagaaacac 219  Q
    ||||||||||||||||||||||||||||  ||||||||||||||||||||||| |||||||||||||||||||||||||    
T  39902433 caccatcattaattatattttactttttttaagattttatgtgtctttatctctccaaattgaagaaatggagaaacac 39902355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 41 - 219
Target Start/End: Complemental strand, 14349921 - 14349744
Alignment:
Q  41 ggtgaagatcctctccatttggcaaaataaatggagttttgtaagttggagagagatagacacaaaaaatagatggtaggtcctaccactaaatgggttc 140  Q
    ||||||||||||||| |||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||| ||||| |    
T  14349921 ggtgaagatcctctctatttggtaaaataaatggagttttgtaagttggagagagacagacacaaaaaatagatggtgggtcctaccactaagtgggtcc 14349822  T
Q  141 caccatcattaattatattttactttttccaagattttatgtgtctttatctccccaaattgaagaaatggagaaacac 219  Q
    |||||||||||||||||||||||||||| ||||| |||||||||||||||||  ||||||| |||||||||||||||||    
T  14349821 caccatcattaattatattttacttttttcaaga-tttatgtgtctttatctttccaaattaaagaaatggagaaacac 14349744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 43 - 219
Target Start/End: Complemental strand, 11775909 - 11775732
Alignment:
Q  43 tgaagatcctctccatttggcaaaataaatggagttttgtaagttggagagagatagacacaaaaaatagatggtaggtcctaccactaaatgggttcca 142  Q
    |||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||| | |||||||||||| ||||| |||    
T  11775909 tgaagatcctctccatttggtaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtggatcctaccactaagtgggtccca 11775810  T
Q  143 ccatcattaattatattttact-ttttccaagattttatgtgtctttatctccccaaattgaagaaatggagaaacac 219  Q
    || ||||||||||||||||||| |||| ||||||||||||||| |||||||| |||||||||||||||||||||||||    
T  11775809 ccgtcattaattatattttactttttttcaagattttatgtgtttttatctctccaaattgaagaaatggagaaacac 11775732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 41 - 219
Target Start/End: Original strand, 18625378 - 18625556
Alignment:
Q  41 ggtgaagatcctctccatttggcaaaataaatggagttttgtaagttggagagagatagacacaaaaaatagatggtaggtcctaccactaaatgggttc 140  Q
    |||||||||||||||||||||||||||||||||||| |||| |||||||||||||| |||||||||||||||||||| |||||||||||||| ||||| |    
T  18625378 ggtgaagatcctctccatttggcaaaataaatggagatttgcaagttggagagagaaagacacaaaaaatagatggtgggtcctaccactaagtgggtcc 18625477  T
Q  141 caccatcattaattatattttactttttccaagattttatgtgtctttatctccccaaattgaagaaatggagaaacac 219  Q
    |||||||||||||||||||||| ||||| |||||||||||||||||||||||| ||||||  ||||||| || ||||||    
T  18625478 caccatcattaattatattttatttttttcaagattttatgtgtctttatctctccaaatgaaagaaattgaaaaacac 18625556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 41 - 215
Target Start/End: Original strand, 40753119 - 40753293
Alignment:
Q  41 ggtgaagatcctctccatttggcaaaataaatggagttttgtaagttggagagagatagacacaaaaaatagatggtaggtcctaccactaaatgggttc 140  Q
    ||||||||||||||| ||||||||||||||||  ||||||| |||||||||| |||||||||||||||||| ||||| |||||||||||||| ||||| |    
T  40753119 ggtgaagatcctctctatttggcaaaataaataaagttttgcaagttggagaaagatagacacaaaaaatatatggtgggtcctaccactaagtgggtcc 40753218  T
Q  141 caccatcattaattatattttactttttccaagattttatgtgtctttatctccccaaattgaagaaatggagaa 215  Q
    |||||||||||||||||||||||||||| ||||||||||||||  |||||||| ||||||| |||||||||||||    
T  40753219 caccatcattaattatattttacttttttcaagattttatgtgcttttatctctccaaattaaagaaatggagaa 40753293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 41 - 212
Target Start/End: Complemental strand, 34827310 - 34827140
Alignment:
Q  41 ggtgaagatcctctccatttggcaaaataaatggagttttgtaagttggagagagatagacacaaaaaatagatggtaggtcctaccactaaatgggttc 140  Q
    |||||||||| ||||||||| ||||||||||||||||| || |||||||||||||||||||| |||||||||||||| | |||||||||||| ||||| |    
T  34827310 ggtgaagatcatctccatttagcaaaataaatggagttatgcaagttggagagagatagacaaaaaaaatagatggtggatcctaccactaagtgggtcc 34827211  T
Q  141 caccatcattaattatattttact-ttttccaagattttatgtgtctttatctccccaaattgaagaaatgga 212  Q
    ||||||| |||||||||||||||| |||| ||| ||||  ||||||||||||||  |||||| ||||||||||    
T  34827210 caccatctttaattatattttactttttttcaaaattt--tgtgtctttatctcttcaaatttaagaaatgga 34827140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 56 - 219
Target Start/End: Original strand, 8440943 - 8441106
Alignment:
Q  56 catttggcaaaataaatggagttttgtaagttggagagagatagacacaaaaaatagatggtaggtcctaccactaaatgggttccaccatcattaatta 155  Q
    |||||||||||||||||||||||||| |||||||||  |||||||||| |||||||||||||  | | ||||||||| || || ||||||||||||||||    
T  8440943 catttggcaaaataaatggagttttgcaagttggaggtagatagacaccaaaaatagatggtgcgacataccactaagtgtgtcccaccatcattaatta 8441042  T
Q  156 tattttactttttccaagattttatgtgtctttatctccccaaattgaagaaatggagaaacac 219  Q
    |||||||||||||  |||||| ||||||| |||||||| ||||||||| |||| ||||||||||    
T  8441043 tattttactttttttaagattgtatgtgtatttatctctccaaattgatgaaacggagaaacac 8441106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 42 - 215
Target Start/End: Complemental strand, 43309225 - 43309062
Alignment:
Q  42 gtgaagatcctctccatttggcaaaataaatggagttttgtaagttggagagagatagacacaaaaaatagatggtaggtcctaccactaaatgggttcc 141  Q
    |||||||||||||  |||||  |||||||||||||||||| |||||||||||||||||||| ||||||||||| || | || ||||| ||||||||||||    
T  43309225 gtgaagatcctctttatttgataaaataaatggagttttgcaagttggagagagatagacataaaaaatagatagtggatcttaccattaaatgggttcc 43309126  T
Q  142 accatcattaattatattttactttttccaagattttatgtgtctttatctccccaaattgaagaaatggagaa 215  Q
    ||||||||||||          ||||| ||||||||||||||||||||||||  ||||||||||||||||||||    
T  43309125 accatcattaat----------ttttttcaagattttatgtgtctttatctcttcaaattgaagaaatggagaa 43309062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 101 - 219
Target Start/End: Complemental strand, 4592858 - 4592741
Alignment:
Q  101 cacaaaaaatagatggtaggtcctaccactaaatgggttccaccatcattaattatattttactttttccaagattttatgtgtctttatctccccaaat 200  Q
    ||||||||||||||||| |||| ||||||||| ||||| ||||||||||||||||||||||||||||| ||| |||||||||||  ||||||| ||||||    
T  4592858 cacaaaaaatagatggtgggtcttaccactaagtgggtcccaccatcattaattatattttacttttttcaatattttatgtgt-attatctctccaaat 4592760  T
Q  201 tgaagaaatggagaaacac 219  Q
    |||||||||||||||||||    
T  4592759 tgaagaaatggagaaacac 4592741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 134 - 219
Target Start/End: Original strand, 1475688 - 1475773
Alignment:
Q  134 tgggttccaccatcattaattatattttactttttccaagattttatgtgtctttatctccccaaattgaagaaatggagaaacac 219  Q
    ||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||| | |||||||||||||||| | ||||||    
T  1475688 tgggtcccaccatcattaattatattttacttttttcaagattttatgtgtctttatcactccaaattgaagaaatgaaaaaacac 1475773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 45 - 208
Target Start/End: Complemental strand, 3057529 - 3057367
Alignment:
Q  45 aagatcctctccatttggcaaaataaatggagttttgtaagttggagagagatagacacaaaaaatagatggtaggtcctaccactaaatgggttccacc 144  Q
    |||||||||||||||| | ||||||||| |||||||  || | ||||||||||||||| |||||| ||||| | | ||||||||| || || |||||| |    
T  3057529 aagatcctctccattttgtaaaataaatagagttttc-aattcggagagagatagacaaaaaaaaaagatgatggatcctaccacaaagtgagttccatc 3057431  T
Q  145 atcattaattatattttactttttccaagattttatgtgtctttatctccccaaattgaagaaa 208  Q
    |||||||||||| || |||||||| |||  |||| |||||||||||||| | |||| |||||||    
T  3057430 atcattaattattttatacttttttcaaacttttttgtgtctttatctctcaaaatggaagaaa 3057367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 64 - 214
Target Start/End: Original strand, 3057135 - 3057284
Alignment:
Q  64 aaaataaatggagttttgtaagttggagagagatagacacaaaaaatagatggtaggtcctaccactaaatgggttccaccatcattaattatattttac 163  Q
    |||||||||||| ||| | || ||||| ||||||| |||||||||||||||||| | |||||||| ||| || ||  ||  |||||||||||||||||||    
T  3057135 aaaataaatggaattt-gcaatttggatagagataaacacaaaaaatagatggtggatcctaccattaagtgagtcacataatcattaattatattttac 3057233  T
Q  164 tttttccaagattttatgtgtctttatctccccaaattgaagaaatggaga 214  Q
    |||||  || | |||| |||||||||||||  ||||| |||||||||||||    
T  3057234 ttttttaaaaaatttaagtgtctttatctcttcaaatagaagaaatggaga 3057284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 45 - 155
Target Start/End: Complemental strand, 29341108 - 29340999
Alignment:
Q  45 aagatcctctccatttggcaaaataaatggagttttgtaagttggagagagatagacacaaaaaatagatggtaggtcctaccactaaatgggttccacc 144  Q
    |||||||||||||||||| | |||||||||||| | | || ||||||||||||||||||| ||||||||| || |||||||| | ||| ||||| |||||    
T  29341108 aagatcctctccatttggtataataaatggagtat-gcaatttggagagagatagacacagaaaatagatagtgggtcctactattaagtgggtcccacc 29341010  T
Q  145 atcattaatta 155  Q
    |||||||||||    
T  29341009 atcattaatta 29340999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 45 - 193
Target Start/End: Complemental strand, 32793487 - 32793340
Alignment:
Q  45 aagatcctctccatttggcaaaataaatggagttttgtaagttggagagagatagacacaaaaaatagatggtaggtcctaccactaaatgggttccacc 144  Q
    |||||||| || |||| ||||||||||||||||||   || || |||||||||| |||||||||||||||| |   || ||| ||||| | ||| ||||     
T  32793487 aagatcctatctatttagcaaaataaatggagtttac-aatttagagagagatatacacaaaaaatagatgatgattcttactactaagtaggtcccaca 32793389  T
Q  145 atcattaattatattttactttttccaagattttatgtgtctttatctc 193  Q
    ||||| |||||||||||||||||| |||||||||||  |||||||||||    
T  32793388 atcatcaattatattttacttttttcaagattttattcgtctttatctc 32793340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 86 - 168
Target Start/End: Complemental strand, 36290675 - 36290593
Alignment:
Q  86 ttggagagagatagacacaaaaaatagatggtaggtcctaccactaaatgggttccaccatcattaattatattttacttttt 168  Q
    ||||||||||||||||||||||||||  |||| ||||||| |||||| ||| | ||||||||||||||||| |||||||||||    
T  36290675 ttggagagagatagacacaaaaaataagtggtgggtcctatcactaagtggatcccaccatcattaattattttttacttttt 36290593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 119 - 215
Target Start/End: Complemental strand, 10173984 - 10173892
Alignment:
Q  119 ggtcctaccactaaatgggttccaccatcattaattatattttactttttccaagattttatgtgtctttatctccccaaattgaagaaatggagaa 215  Q
    ||||||| |||||||||||||| ||||||||||||||| ||||||||||| ||| ||    |||||||||||||| ||||||  | |||||||||||    
T  10173984 ggtcctatcactaaatgggttctaccatcattaattattttttacttttttcaaaat----tgtgtctttatctctccaaatgaaggaaatggagaa 10173892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 79 - 168
Target Start/End: Original strand, 2984385 - 2984474
Alignment:
Q  79 ttgtaagttggagagagatagacacaaaaaatagatggtaggtcctaccactaaatgggttccaccatcattaattatattttacttttt 168  Q
    |||||| ||||||||||||||||||| ||||||  || |   ||||| |||||||||||| ||||||||||||||||| ||||| |||||    
T  2984385 ttgtaatttggagagagatagacacataaaataagtgatgaatcctatcactaaatgggtcccaccatcattaattattttttatttttt 2984474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 92 - 156
Target Start/End: Complemental strand, 43222193 - 43222129
Alignment:
Q  92 agagatagacacaaaaaatagatggtaggtcctaccactaaatgggttccaccatcattaattat 156  Q
    |||||||||||||||||||||||||| |||| || || ||||||| | |||||||||||||||||    
T  43222193 agagatagacacaaaaaatagatggtgggtcttatcattaaatggatcccaccatcattaattat 43222129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 86 - 165
Target Start/End: Complemental strand, 41660179 - 41660100
Alignment:
Q  86 ttggagagagatagacacaaaaaatagatggtaggtcctaccactaaatgggttccaccatcattaattatattttactt 165  Q
    ||||||||||||||||||||||||||  |||| ||||  | |||||  ||||| ||||||||||||||||| ||||||||    
T  41660179 ttggagagagatagacacaaaaaataagtggtgggtctcatcactaggtgggtcccaccatcattaattattttttactt 41660100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 47 - 169
Target Start/End: Complemental strand, 18653472 - 18653351
Alignment:
Q  47 gatcctctccatttggcaaaataaatggagttttgtaagttggagagagatagacacaaaaaatagatggtaggtcctaccactaaatgggttccaccat 146  Q
    ||||||||| | ||| ||||||||||||||||| | || ||| ||||||||||||||||||||||||| ||  || |||||| ||| || ||  ||||||    
T  18653472 gatcctctcaaattgtcaaaataaatggagttt-gcaatttgaagagagatagacacaaaaaatagatagtgagttctaccattaagtgagtctcaccat 18653374  T
Q  147 cattaattatattttactttttc 169  Q
     | ||||||| || |||||||||    
T  18653373 taataattattttatactttttc 18653351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 86 - 152
Target Start/End: Original strand, 27428883 - 27428949
Alignment:
Q  86 ttggagagagatagacacaaaaaatagatggtaggtcctaccactaaatgggttccaccatcattaa 152  Q
    ||||| ||||||||||||||||||||||||||   |||||||| ||| || ||||||||||||||||    
T  27428883 ttggaaagagatagacacaaaaaatagatggtgaatcctaccattaagtgagttccaccatcattaa 27428949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 80 - 168
Target Start/End: Complemental strand, 17247485 - 17247397
Alignment:
Q  80 tgtaagttggagagagatagacacaaaaaatagatggtaggtcctaccactaaatgggttccaccatcattaattatattttacttttt 168  Q
    ||||| || ||||||||||||| |||||||||| |||| ||| ||| || ||| || |||||| ||| ||||||||| |||||||||||    
T  17247485 tgtaatttagagagagatagacgcaaaaaataggtggtgggttctatcattaagtgcgttccatcataattaattattttttacttttt 17247397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 121 - 188
Target Start/End: Original strand, 28142812 - 28142881
Alignment:
Q  121 tcctaccactaaatgggttccaccatcattaattatattttac-tttttccaaga-ttttatgtgtcttt 188  Q
    |||||||| ||| || || |||||||||||||||||||||||| ||||| ||||| ||||||||||||||    
T  28142812 tcctaccattaagtgagtcccaccatcattaattatattttactttttttcaagatttttatgtgtcttt 28142881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 45 - 214
Target Start/End: Complemental strand, 31546599 - 31546431
Alignment:
Q  45 aagatcctctccatttggcaaaataaatggagttttgtaagttggagagagatagacacaaaaaatagatggtaggtcctaccactaaatgggttccacc 144  Q
    |||||| || |||||||||| |||||||||||| | | || ||| |||||| |||||| | |||||||||||| || ||||| | ||| ||| | ||| |    
T  31546599 aagatcatccccatttggcataataaatggagtat-gcaatttgaagagaggtagacatataaaatagatggtgggccctactattaagtggatcccatc 31546501  T
Q  145 atcattaattatattttactttttccaagattttatgtgtctttatctccccaaattgaagaaatggaga 214  Q
    || ||||||||  ||||| |||||| ||  || | |||| || |||||| ||||||||| ||||| ||||    
T  31546500 ataattaattactttttagtttttcgaaatttgtttgtgactatatctctccaaattgatgaaatagaga 31546431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 90 - 214
Target Start/End: Complemental strand, 14688643 - 14688519
Alignment:
Q  90 agagagatagacacaaaaaatagatggtaggtcctaccactaaatgggttccaccatcattaattatattttactttttccaagattttatgtgtcttta 189  Q
    |||||||| |||||| |||||||||  | | | |||||| ||| ||| ||||||||||||||  ||| ||| |||||||  ||  |||| | ||||||||    
T  14688643 agagagatcgacacataaaatagatattggattctaccattaagtggattccaccatcattagatatttttgactttttttaaatttttgtatgtcttta 14688544  T
Q  190 tctccccaaattgaagaaatggaga 214  Q
    |||| |||||| |||||||| ||||    
T  14688543 tctctccaaatggaagaaatagaga 14688519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 167
Target Start/End: Original strand, 3041309 - 3041391
Alignment:
Q  86 ttggagagagatagacacaaaaaataga-tggtaggtcctaccactaaatgggttccaccatcattaattatattttactttt 167  Q
    ||||||||||||||| ||||||||   | |||| ||||||| ||||||  |||| ||||||||||||||||| ||||| ||||    
T  3041309 ttggagagagatagatacaaaaaaacaagtggtgggtcctatcactaagcgggtcccaccatcattaattattttttattttt 3041391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 156
Target Start/End: Complemental strand, 35650383 - 35650321
Alignment:
Q  94 agatagacacaaaaaatagatggtaggtcctaccactaaatgggttccaccatcattaattat 156  Q
    ||||||||||||||||||| |||| |||||||  | ||||||  || ||||||||||||||||    
T  35650383 agatagacacaaaaaataggtggtgggtcctattattaaatgaatttcaccatcattaattat 35650321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 47 - 104
Target Start/End: Original strand, 9460599 - 9460655
Alignment:
Q  47 gatcctctccatttggcaaaataaatggagttttgtaagttggagagagatagacaca 104  Q
    |||||||||||||||| ||||||||| ||| | || || |||||||||||||||||||    
T  9460599 gatcctctccatttggtaaaataaatagag-tatgcaatttggagagagatagacaca 9460655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 171 - 215
Target Start/End: Original strand, 2582434 - 2582478
Alignment:
Q  171 aagattttatgtgtctttatctccccaaattgaagaaatggagaa 215  Q
    |||||||| ||||||| |||||||||||||  |||||||||||||    
T  2582434 aagattttttgtgtctatatctccccaaatgaaagaaatggagaa 2582478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 100 - 136
Target Start/End: Original strand, 3257709 - 3257745
Alignment:
Q  100 acacaaaaaatagatggtaggtcctaccactaaatgg 136  Q
    |||||||||||||||||| | ||||||||||||||||    
T  3257709 acacaaaaaatagatggtcgatcctaccactaaatgg 3257745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 156
Target Start/End: Complemental strand, 9465810 - 9465746
Alignment:
Q  92 agagatagacacaaaaaatagatggtaggtcctaccactaaatgggttccaccatcattaattat 156  Q
    ||||||||||||| ||||||| |||| | ||||| || ||||||  || ||||||||||||||||    
T  9465810 agagatagacacataaaataggtggtggatcctatcattaaatgaatttcaccatcattaattat 9465746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 147; Significance: 1e-77; HSPs: 33)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 41 - 219
Target Start/End: Complemental strand, 35316943 - 35316765
Alignment:
Q  41 ggtgaagatcctctccatttggcaaaataaatggagttttgtaagttggagagagatagacacaaaaaatagatggtaggtcctaccactaaatgggttc 140  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| | |||||||||||| ||||| |    
T  35316943 ggtgaagatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtggatcctaccactaagtgggtcc 35316844  T
Q  141 caccatcattaattatattttactttttccaagattttatgtgtctttatctccccaaattgaagaaatggagaaacac 219  Q
    |||||||||||||||||||||||||||| ||||||||||| |||||||||||| |||||||||||||||||||||||||    
T  35316843 caccatcattaattatattttacttttttcaagattttatatgtctttatctctccaaattgaagaaatggagaaacac 35316765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 41 - 219
Target Start/End: Complemental strand, 28565010 - 28564831
Alignment:
Q  41 ggtgaagatcctctccatttggcaaaataaatggagttttgtaagttggagagagatagacacaaaaaatagatggtaggtcctaccactaaatgggttc 140  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||| |||||||||||||| ||||| |    
T  28565010 ggtgaagatcctctccatttggcaaaataaatggagttttttaagttgtagagagatagacacaaaaaatagatggtgggtcctaccactaagtgggtcc 28564911  T
Q  141 caccatcattaattatattttact-ttttccaagattttatgtgtctttatctccccaaattgaagaaatggagaaacac 219  Q
    |||||||||||||||||||||||| ||||  ||||||||||||||||||||||| |||||||||||||||||||||||||    
T  28564910 caccatcattaattatattttacttttttaaaagattttatgtgtctttatctctccaaattgaagaaatggagaaacac 28564831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 43 - 217
Target Start/End: Complemental strand, 13238797 - 13238623
Alignment:
Q  43 tgaagatcctctccatttggcaaaataaatggagttttgtaagttggagagagatagacacaaaaaatagatggtaggtcctaccactaaatgggttcca 142  Q
    |||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||| ||||||||||| || ||||| |||    
T  13238797 tgaagatcctctccatttggcaaaataaatggagatttgcaagttggagagagatagacacaaaaaatagatggtgggtcctaccaccaagtgggtccca 13238698  T
Q  143 ccatcattaattatattttactttttccaagattttatgtgtctttatctccccaaattgaagaaatggagaaac 217  Q
    |||||||||||||||||||| ||||| |||||||||||||||||||||||| ||||||||||||||| |||||||    
T  13238697 ccatcattaattatattttatttttttcaagattttatgtgtctttatctctccaaattgaagaaattgagaaac 13238623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 41 - 217
Target Start/End: Original strand, 23259444 - 23259620
Alignment:
Q  41 ggtgaagatcctctccatttggcaaaataaatggagttttgtaagttggagagagatagacacaaaaaatagatggtaggtcctaccactaaatgggttc 140  Q
    |||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||| |||| |||||||| ||||| ||| | |    
T  23259444 ggtgaagatcctctccatttggcaaaataaatggtgttttgcaagttggagagagatagacacaaaaaatagctggtgggtcctactactaagtggatcc 23259543  T
Q  141 caccatcattaattatattttactttttccaagattttatgtgtctttatctccccaaattgaagaaatggagaaac 217  Q
    ||||||||||||||||||||||||||||  |||||||||| |||||||||| | | |||||||||||||| ||||||    
T  23259544 caccatcattaattatattttactttttttaagattttatatgtctttatccctcaaaattgaagaaatgaagaaac 23259620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 41 - 193
Target Start/End: Complemental strand, 11864987 - 11864843
Alignment:
Q  41 ggtgaagatcctctccatttggcaaaataaatggagttttgtaagttggagagagatagacacaaaaaatagatggtaggtcctaccactaaatgggttc 140  Q
    ||||||||||||||||||||  ||||||||||||||||||  |||||||||||||||||||||||||||||||||        |||||||||||| ||      
T  11864987 ggtgaagatcctctccatttatcaaaataaatggagttttacaagttggagagagatagacacaaaaaatagatg--------taccactaaatgagtct 11864896  T
Q  141 caccatcattaattatattttactttttccaagattttatgtgtctttatctc 193  Q
    |||||||||  ||||||||||||||||||||||||||||| | ||||| ||||    
T  11864895 caccatcatggattatattttactttttccaagattttatttatctttgtctc 11864843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 41 - 219
Target Start/End: Original strand, 45625036 - 45625197
Alignment:
Q  41 ggtgaagatcctctccatttggcaaaataaatggagttttgtaagttggagagagatagacacaaaaaatagatggtaggtcctaccactaaatgggttc 140  Q
    ||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||| ||||| || |                 ||||| |    
T  45625036 ggtgaagatcctctccatttggcaaaataaatggagttttacaagttggagagagatagacacaagaaataaattg-----------------tgggtcc 45625118  T
Q  141 caccatcattaattatattttactttttccaagattttatgtgtctttatctccccaaattgaagaaatggagaaacac 219  Q
    |||||||||||||| |||||||  |||| |||||||||| ||||||||||||| | |||||||||||||||||||||||    
T  45625119 caccatcattaattttattttatatttttcaagattttacgtgtctttatctctctaaattgaagaaatggagaaacac 45625197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 45 - 168
Target Start/End: Complemental strand, 2063467 - 2063344
Alignment:
Q  45 aagatcctctccatttggcaaaataaatggagttttgtaagttggagagagatagacacaaaaaatagatggta-ggtcctaccactaaatgggttccac 143  Q
    |||||||||| |||||| |||||||||| |||||| | || ||||||||||||||||||||||||||||||||  ||||||||||| || ||||||||||    
T  2063467 aagatcctcttcatttgacaaaataaatagagttt-gcaatttggagagagatagacacaaaaaatagatggtttggtcctaccaccaagtgggttccac 2063369  T
Q  144 catcattaattatattttacttttt 168  Q
    |||||||||| ||||| ||||||||    
T  2063368 catcattaataatattatacttttt 2063344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 134 - 219
Target Start/End: Complemental strand, 39465800 - 39465715
Alignment:
Q  134 tgggttccaccatcattaattatattttactttttccaagattttatgtgtctttatctccccaaattgaagaaatggagaaacac 219  Q
    ||||| ||||||||||||||||||||||||||||| ||||||||||||||| |||||||| |||||||||| ||||||||||||||    
T  39465800 tgggtcccaccatcattaattatattttacttttttcaagattttatgtgtttttatctctccaaattgaaaaaatggagaaacac 39465715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 64 - 168
Target Start/End: Original strand, 21454476 - 21454578
Alignment:
Q  64 aaaataaatggagttttgtaagttggagagagatagacacaaaaaatagatggtaggtcctaccactaaatgggttccaccatcattaattatattttac 163  Q
    |||||||||||||||| |||| || |||||||||||||||||||| ||||| || |||| ||||| ||| ||||||||||||||||||||||| ||||||    
T  21454476 aaaataaatggagttt-gtaatttagagagagatagacacaaaaa-tagattgtgggtcataccattaagtgggttccaccatcattaattattttttac 21454573  T
Q  164 ttttt 168  Q
    |||||    
T  21454574 ttttt 21454578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 48 - 174
Target Start/End: Original strand, 4446860 - 4446986
Alignment:
Q  48 atcctctccatttggcaaaataaatggagttttgtaagttggagagagatagacacaaaaaatagatggtaggtcctaccactaaatgggttccaccatc 147  Q
    ||||||||||||||  ||||||||||||  | |  || ||| ||||||||||||||| ||||||||| || | |||||||||||| |||||| ||| |||    
T  4446860 atcctctccatttgataaaataaatggaagtgtacaatttgaagagagatagacacataaaatagatagtggatcctaccactaattgggtttcactatc 4446959  T
Q  148 attaattatattttactttttccaaga 174  Q
    ||||||||| |||||||||||| ||||    
T  4446960 attaattattttttactttttctaaga 4446986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 86 - 168
Target Start/End: Original strand, 23459848 - 23459930
Alignment:
Q  86 ttggagagagatagacacaaaaaatagatggtaggtcctaccactaaatgggttccaccatcattaattatattttacttttt 168  Q
    ||||||||||||||||||||||||||  |||  ||||||| |||||||||||| ||||||||||||||||| |||||||||||    
T  23459848 ttggagagagatagacacaaaaaataagtggcgggtcctatcactaaatgggtcccaccatcattaattattttttacttttt 23459930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 145 - 219
Target Start/End: Original strand, 41983401 - 41983474
Alignment:
Q  145 atcattaattatattttactttttccaagattttatgtgtctttatctccccaaattgaagaaatggagaaacac 219  Q
    |||||||||||||||||||||||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||    
T  41983401 atcattaattatattttacttttttcaagattt-atgtgtctttatctctccaaattaaagaaatggagaaacac 41983474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 51 - 168
Target Start/End: Complemental strand, 36929823 - 36929707
Alignment:
Q  51 ctctccatttggcaaaataaatggagttttgtaagttggagagagatagacacaaaaaatagatggtaggtcctaccactaaatgggttccaccatcatt 150  Q
    |||||||||| |||||||||||||||| | | || ||||||||||||||||||| ||||||| | ||  ||||||||| ||||||| |||| ||||||||    
T  36929823 ctctccatttagcaaaataaatggagtat-gcaatttggagagagatagacacataaaataggtagtgtgtcctaccattaaatggattccgccatcatt 36929725  T
Q  151 aattatattttacttttt 168  Q
    |||||  |||||||||||    
T  36929724 aattactttttacttttt 36929707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 86 - 168
Target Start/End: Complemental strand, 375066 - 374984
Alignment:
Q  86 ttggagagagatagacacaaaaaatagatggtaggtcctaccactaaatgggttccaccatcattaattatattttacttttt 168  Q
    ||||||||||||||||||||||||||  |||| |||||||  ||||| ||||| ||||||||||||||||| |||||||||||    
T  375066 ttggagagagatagacacaaaaaataagtggtgggtcctattactaagtgggtcccaccatcattaattattttttacttttt 374984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 86 - 167
Target Start/End: Complemental strand, 8988928 - 8988847
Alignment:
Q  86 ttggagagagatagacacaaaaaatagatggtaggtcctaccactaaatgggttccaccatcattaattatattttactttt 167  Q
    ||||||||||||||||||||||||||  || ||||||||| |||||| ||||| ||||||||||||||||| ||||| ||||    
T  8988928 ttggagagagatagacacaaaaaataagtgataggtcctatcactaagtgggtcccaccatcattaattattttttattttt 8988847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 145 - 219
Target Start/End: Original strand, 374499 - 374573
Alignment:
Q  145 atcattaattatattttactttttccaagattttatgtgtctttatctccccaaattgaagaaatggagaaacac 219  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||||| | ||||  |||||| ||||||||||    
T  374499 atcattaattatattttacttttttcaagattttatgtgtttttatctctctaaatgaaagaaagggagaaacac 374573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 86 - 168
Target Start/End: Complemental strand, 30709183 - 30709101
Alignment:
Q  86 ttggagagagatagacacaaaaaatagatggtaggtcctaccactaaatgggttccaccatcattaattatattttacttttt 168  Q
    ||||||||||||||||||| |||||||||  | |||||||||||||| ||| | ||||||||||||||| | |||||||||||    
T  30709183 ttggagagagatagacacataaaatagatattgggtcctaccactaagtggatcccaccatcattaattgttttttacttttt 30709101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 47 - 156
Target Start/End: Original strand, 30857642 - 30857750
Alignment:
Q  47 gatcctctccatttggcaaaataaatggagttttgtaagttggagagagatagacacaaaaaatagatggtaggtcctaccactaaatgggttccaccat 146  Q
    ||||||||||||||  ||||||||||||||| | |||| ||| |||||| ||||||||||||||||||  | | |||||| | ||||||| |  ||||||    
T  30857642 gatcctctccatttcacaaaataaatggagtat-gtaatttgaagagaggtagacacaaaaaatagataatggatcctactattaaatggatcacaccat 30857740  T
Q  147 cattaattat 156  Q
    ||||||||||    
T  30857741 cattaattat 30857750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 46 - 122
Target Start/End: Complemental strand, 40640783 - 40640706
Alignment:
Q  46 agatcctctccatttggcaaaataaatggagttttgtaagttggagagagatagacacaaaa-aatagatggtaggtc 122  Q
    ||||||||||||||||  |||||||||||||||||| || ||||||||||||| | |||||| |||||||||| ||||    
T  40640783 agatcctctccatttgttaaaataaatggagttttgcaatttggagagagatatatacaaaagaatagatggtgggtc 40640706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 154 - 214
Target Start/End: Complemental strand, 2061382 - 2061322
Alignment:
Q  154 tatattttactttttccaagattttatgtgtctttatctccccaaattgaagaaatggaga 214  Q
    ||||||||||||||| |||||||||||| ||||||||||| |||||| |||||||| ||||    
T  2061382 tatattttacttttttcaagattttatgcgtctttatctctccaaatggaagaaattgaga 2061322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 132 - 216
Target Start/End: Complemental strand, 12949496 - 12949413
Alignment:
Q  132 aatgggttccaccatcattaattatattttactttttccaagattttatgtgtctttatctccccaaattgaagaaatggagaaa 216  Q
    ||||||| || || ||||||||||| ||||||||||| ||||||||||||| |||||||||| |||||| | ||||| |||||||    
T  12949496 aatgggtcccgccgtcattaattat-ttttacttttttcaagattttatgtatctttatctctccaaataggagaaacggagaaa 12949413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 45 - 168
Target Start/End: Original strand, 36758823 - 36758945
Alignment:
Q  45 aagatcctctccatttggcaaaataaatggagttttgtaagttggagagagatagacacaaaaaatagatggtaggtcctaccactaaatgggttccacc 144  Q
    ||||||||||||||||   ||||||||||||  || | || ||||||||||||||||||||||| ||  |||| | ||||| |  ||  ||||||||||     
T  36758823 aagatcctctccatttataaaaataaatggaagtt-gcaatttggagagagatagacacaaaaagtaagtggtggatcctatctttaggtgggttccaca 36758921  T
Q  145 atcattaattatattttacttttt 168  Q
    |||||||||||| |||||||||||    
T  36758922 atcattaattattttttacttttt 36758945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 45 - 123
Target Start/End: Complemental strand, 38824140 - 38824061
Alignment:
Q  45 aagatcctctccatttggcaaaataaatggagttttgtaagttggagagagatagacacaaaa-aatagatggtaggtcc 123  Q
    |||||| |||| |||||  ||||||||||||||||||||| ||||||||||||||||| |||| |||| ||||| |||||    
T  38824140 aagatcatctctatttgctaaaataaatggagttttgtaatttggagagagatagacaaaaaagaataaatggtgggtcc 38824061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 45 - 214
Target Start/End: Complemental strand, 38397194 - 38397028
Alignment:
Q  45 aagatcctctccatttggcaaaataaatggagttttgtaagttggagagagatagacacaaaaaatagatggtaggtcctaccactaaatgggttccacc 144  Q
    |||||||||||||||| | | |||||| ||||| | | || ||| ||||||||||||| | ||||||||| || ||| |||| | ||| || || |||||    
T  38397194 aagatcctctccattttgtataataaacggagtat-gcaatttgaagagagatagacaaataaaatagatagtgggtgctactattaagtgagtcccacc 38397096  T
Q  145 atcattaattatattttactttttccaagattttatgtgtctttatctccccaaattgaagaaatggaga 214  Q
    |||| ||||||  ||||| ||||||  | ||||| | ||||| |||||| ||||||||| ||||||||||    
T  38397095 atcaataattactttttagtttttc--aaattttttttgtctatatctctccaaattgatgaaatggaga 38397028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 52 - 155
Target Start/End: Complemental strand, 15709874 - 15709772
Alignment:
Q  52 tctccatttggcaaaataaatggagttttgtaagttggagagagatagacacaaaaaatagatggtaggtcctaccactaaatgggttccaccatcatta 151  Q
    |||| |||| |||||||||||||| | | | || ||||||||||||| ||| | ||||||||| || | |||||||| ||| ||||||||| ||||||||    
T  15709874 tctcgatttagcaaaataaatggaatat-gcaatttggagagagataaacatataaaatagatagtggatcctaccattaagtgggttccatcatcatta 15709776  T
Q  152 atta 155  Q
    ||||    
T  15709775 atta 15709772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 48 - 167
Target Start/End: Complemental strand, 15722344 - 15722226
Alignment:
Q  48 atcctctccatttggcaaaataaatggagttttgtaagttggagagagatagacacaaaaaatagatggtaggtcctaccactaaatgggttccaccatc 147  Q
    |||||||| |||| | |||||||||||| | | | || ||||| ||||||| ||| | ||||||||| ||   |||||||| ||||||||||||||||||    
T  15722344 atcctctctatttagaaaaataaatggaatat-gcaatttggaaagagataaacatataaaatagatagtttatcctaccattaaatgggttccaccatc 15722246  T
Q  148 attaattatattttactttt 167  Q
    |||||||   ||||||||||    
T  15722245 attaattcctttttactttt 15722226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 86 - 168
Target Start/End: Complemental strand, 29188727 - 29188644
Alignment:
Q  86 ttggagagagatagacacaaaaaataga-tggtaggtcctaccactaaatgggttccaccatcattaattatattttacttttt 168  Q
    ||||||||||||||||||||||||   | ||||  |||||| ||||||  |||| ||||||||||||||||| |||||||||||    
T  29188727 ttggagagagatagacacaaaaaaacaagtggtgcgtcctatcactaagcgggtcccaccatcattaattattttttacttttt 29188644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 140 - 219
Target Start/End: Complemental strand, 10877722 - 10877642
Alignment:
Q  140 ccaccatcattaattatattttactttttcca--agattttatgtgtctttatctccccaaattgaagaaatggagaaacac 219  Q
    ||||||||||||||||||||| | |||||     | ||||||||||| |||||||| |||||||||||||||||||||||||    
T  10877722 ccaccatcattaattatatttcatttttttttttaaattttatgtgt-tttatctctccaaattgaagaaatggagaaacac 10877642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 45 - 162
Target Start/End: Complemental strand, 19908892 - 19908777
Alignment:
Q  45 aagatcctctccatttggcaaaataaatggagttttgtaagttggagagagatagacacaaaaaatagatggtaggtcctaccactaaatgggttccacc 144  Q
    |||||||||| ||||||  | |||||||||||| | | || |||||| |||||||||||| ||||||||| ||  |||||||   ||| ||||| |||||    
T  19908892 aagatcctcttcatttgatataataaatggagtat-gcaatttggag-gagatagacacataaaatagatagtgagtcctacttttaagtgggtcccacc 19908795  T
Q  145 atcattaattatatttta 162  Q
    |||||||||||| |||||    
T  19908794 atcattaattatttttta 19908777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 43 - 80
Target Start/End: Original strand, 32009934 - 32009971
Alignment:
Q  43 tgaagatcctctccatttggcaaaataaatggagtttt 80  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  32009934 tgaagatcctctccatttgacaaaataaatggagtttt 32009971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 151
Target Start/End: Complemental strand, 13780572 - 13780506
Alignment:
Q  86 ttggagagagatagacacaa-aaaatagatggtaggtcctaccactaaatgggttccaccatcatta 151  Q
    |||||||||||||||||||| ||||||  |||| ||||||| |||||| ||| | ||||||||||||    
T  13780572 ttggagagagatagacacaaaaaaataagtggtgggtcctatcactaagtggatcccaccatcatta 13780506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 79 - 128
Target Start/End: Original strand, 3354775 - 3354824
Alignment:
Q  79 ttgtaagttggagagagatagacacaaaaaatagatggtaggtcctacca 128  Q
    |||||| ||||||||||||||||||||||||||  |||| ||||| ||||    
T  3354775 ttgtaatttggagagagatagacacaaaaaataagtggtgggtcccacca 3354824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 217
Target Start/End: Original strand, 42075456 - 42075496
Alignment:
Q  177 ttatgtgtctttatctccccaaattgaagaaatggagaaac 217  Q
    ||||||||||||||||| |||||| ||||||||||| ||||    
T  42075456 ttatgtgtctttatctctccaaatggaagaaatggataaac 42075496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 144; Significance: 7e-76; HSPs: 49)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 144; E-Value: 7e-76
Query Start/End: Original strand, 40 - 219
Target Start/End: Complemental strand, 34778540 - 34778361
Alignment:
Q  40 aggtgaagatcctctccatttggcaaaataaatggagttttgtaagttggagagagatagacacaaaaaatagatggtaggtcctaccactaaatgggtt 139  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||| | |||||||||||| |||||     
T  34778540 aggtgaagatcctctccatttggcaaaataaatggagttttgcaagttgaagagagatagacacaaaaaatagatggtggatcctaccactaagtgggtc 34778441  T
Q  140 ccaccatcattaattatattttactttttccaagattttatgtgtctttatctccccaaattgaagaaatggagaaacac 219  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||| |||||||||||||||||||||    
T  34778440 ccaccatcattaattatattttacttttttcaagattttatgtgtctttatctctccacattgaagaaatggagaaacac 34778361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 41 - 219
Target Start/End: Original strand, 3952127 - 3952305
Alignment:
Q  41 ggtgaagatcctctccatttggcaaaataaatggagttttgtaagttggagagagatagacacaaaaaatagatggtaggtcctaccactaaatgggttc 140  Q
    ||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||| |||||||||||||| |||||||||||||| |||||      
T  3952127 ggtgaagatcctctccatttggcaaaataaatggagtttggcaagttggagagagatagacaaaaaaaatagatggtgggtcctaccactaagtgggtct 3952226  T
Q  141 caccatcattaattatattttactttttccaagattttatgtgtctttatctccccaaattgaagaaatggagaaacac 219  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  3952227 caccatcattaattatattttacttttttcaagattttatgtgtctttatctctccaaattgaagaaatggagaaacac 3952305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 41 - 219
Target Start/End: Original strand, 19901875 - 19902053
Alignment:
Q  41 ggtgaagatcctctccatttggcaaaataaatggagttttgtaagttggagagagatagacacaaaaaatagatggtaggtcctaccactaaatgggttc 140  Q
    |||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| |    
T  19901875 ggtgaagatcctctccatttggtaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtgggtcctaccactaagtgggtcc 19901974  T
Q  141 caccatcattaattatattttactttttccaagattttatgtgtctttatctccccaaattgaagaaatggagaaacac 219  Q
    |||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||||||||||||| |||||||||    
T  19901975 caccatcattaattatattttacttttttcaaaattttatgtgtctttatctctccaaattgaagaaatagagaaacac 19902053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 41 - 218
Target Start/End: Complemental strand, 56558397 - 56558220
Alignment:
Q  41 ggtgaagatcctctccatttggcaaaataaatggagttttgtaagttggagagagatagacacaaaaaatagatggtaggtcctaccactaaatgggttc 140  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| |||||| ||||| |    
T  56558397 ggtgaagatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtgggtcctatcactaagtgggtcc 56558298  T
Q  141 caccatcattaattatattttactttttccaagattttatgtgtctttatctccccaaattgaagaaatggagaaaca 218  Q
    |||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||||||||||||| ||||||||    
T  56558297 caccatcattaattatattttacttttttcaaaattttatgtgtctttatctctccaaattgaagaaatagagaaaca 56558220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 41 - 219
Target Start/End: Original strand, 33247087 - 33247263
Alignment:
Q  41 ggtgaagatcctctccatttggcaaaataaatggagttttgtaagttggagagagatagacacaaaaaatagatggtaggtcctaccactaaatgggttc 140  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||| ||| ||||||||||||||||||    
T  33247087 ggtgaagatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaagaaatagatggtgggttctaccactaaatgggttc 33247186  T
Q  141 caccatcattaattatattttactttttccaagattttatgtgtctttatctccccaaattgaagaaatggagaaacac 219  Q
    |||||||||||||||||||||| ||||| |  ||||||||||||||||||||| |||||||||||||||||||||||||    
T  33247187 caccatcattaattatattttatttttttc--gattttatgtgtctttatctctccaaattgaagaaatggagaaacac 33247263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 41 - 218
Target Start/End: Original strand, 5763119 - 5763296
Alignment:
Q  41 ggtgaagatcctctccatttggcaaaataaatggagttttgtaagttggagagagatagacacaaaaaatagatggtaggtcctaccactaaatgggttc 140  Q
    ||||||||||||||| ||||||||||||| ||||||||||  |||||||||||||||||| |||||||||||||||| |||||||||||||| ||||| |    
T  5763119 ggtgaagatcctctcaatttggcaaaatatatggagttttacaagttggagagagatagaaacaaaaaatagatggtgggtcctaccactaagtgggtcc 5763218  T
Q  141 caccatcattaattatattttactttttccaagattttatgtgtctttatctccccaaattgaagaaatggagaaaca 218  Q
    |||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||||||||||||||||||||||    
T  5763219 caccatcattaattatattttacttttttcaaaattttatgtgtctttatctctccaaattgaagaaatggagaaaca 5763296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 41 - 218
Target Start/End: Complemental strand, 23610760 - 23610583
Alignment:
Q  41 ggtgaagatcctctccatttggcaaaataaatggagttttgtaagttggagagagatagacacaaaaaatagatggtaggtcctaccactaaatgggttc 140  Q
    |||||||||||||||||||||  |||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||| ||||||||| ||||| |    
T  23610760 ggtgaagatcctctccatttgataaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtgggtcataccactaagtgggtcc 23610661  T
Q  141 caccatcattaattatattttactttttccaagattttatgtgtctttatctccccaaattgaagaaatggagaaaca 218  Q
    |||||||||||| ||||||||||||||| ||||||||||||| |||||||||| ||||||||||||||||||||||||    
T  23610660 caccatcattaaatatattttacttttttcaagattttatgtatctttatctctccaaattgaagaaatggagaaaca 23610583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 41 - 217
Target Start/End: Original strand, 38079677 - 38079853
Alignment:
Q  41 ggtgaagatcctctccatttggcaaaataaatggagttttgtaagttggagagagatagacacaaaaaatagatggtaggtcctaccactaaatgggttc 140  Q
    ||||||||||||||||||||  |||||||||||||||||||  |||| ||||||||||||||||| ||||||||||| |||||||| ||||| ||| |||    
T  38079677 ggtgaagatcctctccatttaacaaaataaatggagttttgctagtttgagagagatagacacaagaaatagatggtgggtcctactactaagtggattc 38079776  T
Q  141 caccatcattaattatattttactttttccaagattttatgtgtctttatctccccaaattgaagaaatggagaaac 217  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||| ||||||||||||    
T  38079777 caccatcattaattatattttacttttttcaagattttatgtgtctttatctctccaaattgaaaaaatggagaaac 38079853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 41 - 219
Target Start/End: Original strand, 18206997 - 18207175
Alignment:
Q  41 ggtgaagatcctctccatttggcaaaataaatggagttttgtaagttggagagagatagacacaaaaaatagatggtaggtcctaccactaaatgggttc 140  Q
    ||||||||||||||||||||| ||||||||||| ||||||| ||||| |||||||||||||| |||||||||||||| |||||||||||||| ||||| |    
T  18206997 ggtgaagatcctctccatttgacaaaataaatgtagttttgcaagttagagagagatagacaaaaaaaatagatggtgggtcctaccactaagtgggtcc 18207096  T
Q  141 caccatcattaattatattttactttttccaagattttatgtgtctttatctccccaaattgaagaaatggagaaacac 219  Q
    || |||||||||||||||||||| |||| |||||||||||||||||||||||  ||||||||||||||| |||||||||    
T  18207097 catcatcattaattatattttacctttttcaagattttatgtgtctttatctttccaaattgaagaaattgagaaacac 18207175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 122; E-Value: 9e-63
Query Start/End: Original strand, 41 - 219
Target Start/End: Original strand, 5416423 - 5416602
Alignment:
Q  41 ggtgaagatcctctccatttggcaaaataaatggagttttgtaagttggagagagatagacacaaaaaatagatggtaggtcctaccactaaatgggttc 140  Q
    ||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||| |||||||||| || |||||||||||||| ||||| |    
T  5416423 ggtgaagatcctctccatttgacaaaataaatggagttttgcaagttggagagagatagacac-aaaaatagattgtgggtcctaccactaagtgggtcc 5416521  T
Q  141 caccatcattaattatattttac--tttttccaagattttatgtgtctttatctccccaaattgaagaaatggagaaacac 219  Q
    |||||||||||||||||||||||  |||||  ||||||||||||||||||||||  |||||||||||||||||||||||||    
T  5416522 caccatcattaattatattttacttttttttaaagattttatgtgtctttatctgtccaaattgaagaaatggagaaacac 5416602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 41 - 219
Target Start/End: Complemental strand, 39862635 - 39862457
Alignment:
Q  41 ggtgaagatcctctccatttggcaaaataaatggagttttgtaagttggagagagatagacacaaaaaatagatggtaggtcctaccactaaatgggttc 140  Q
    |||||||||||||||||||||  ||||||||| || ||||| ||||| |||||||||||||||||||||||||||||  |||||| ||||||||| ||||    
T  39862635 ggtgaagatcctctccatttgataaaataaatagaattttgcaagtttgagagagatagacacaaaaaatagatggtgtgtcctatcactaaatgagttc 39862536  T
Q  141 caccatcattaattatattttactttttccaagattttatgtgtctttatctccccaaattgaagaaatggagaaacac 219  Q
    ||||||||||||||||||||||||||||  ||||||||||||||||||||||| ||||||||||||||  |||||||||    
T  39862535 caccatcattaattatattttactttttttaagattttatgtgtctttatctctccaaattgaagaaaatgagaaacac 39862457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 41 - 209
Target Start/End: Original strand, 33262509 - 33262677
Alignment:
Q  41 ggtgaagatcctctccatttggcaaaataaatggagttttgtaagttggagagagatagacacaaaaaatagatggtaggtcctaccactaaatgggttc 140  Q
    ||||||||||||||| |||||||||||||||| | |||||| ||||| ||||||||||||||||||||||||||||| | |||||||||||||| ||| |    
T  33262509 ggtgaagatcctctctatttggcaaaataaattgtgttttgcaagttagagagagatagacacaaaaaatagatggtggatcctaccactaaataggtcc 33262608  T
Q  141 caccatcattaattatattttactttttccaagattttatgtgtctttatctccccaaattgaagaaat 209  Q
    ||||||||||||||||||||||||||||  || |||||||||||||||||||| |||||||||||||||    
T  33262609 caccatcattaattatattttactttttttaaaattttatgtgtctttatctctccaaattgaagaaat 33262677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 52 - 192
Target Start/End: Complemental strand, 30568008 - 30567868
Alignment:
Q  52 tctccatttggcaaaataaatggagttttgtaagttggagagagatagacacaaaaaatagatggtaggtcctaccactaaatgggttccaccatcatta 151  Q
    |||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||| |||||||||||||| ||||||||| ||||||||    
T  30568008 tctccatttggcaaaataaatggagttttgcaagttgaagagagatagacacaaaaaatagatggtgggtcctaccactaagtgggttccatcatcatta 30567909  T
Q  152 attatattttactttttccaagattttatgtgtctttatct 192  Q
    ||||||||||||||||| ||| |||||||||||||||||||    
T  30567908 attatattttacttttttcaaaattttatgtgtctttatct 30567868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 41 - 219
Target Start/End: Complemental strand, 24073734 - 24073557
Alignment:
Q  41 ggtgaagatcctctccatttggcaaaataaatggagttttgtaagttggagagagatagacacaaaaaatagatggtaggtcctaccactaaatgggttc 140  Q
    ||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||| |||||||||||||| ||||| |    
T  24073734 ggtgaagatcctccccatttggcaaaataaatggagatttgtaagttggagagagatagacacaacaaatagatggtgggtcctaccactaagtgggtcc 24073635  T
Q  141 caccatcattaattatattttactttttccaagattttatgtgtctttatctccccaaattgaagaaatggagaaacac 219  Q
    | |||||||||||||||| ||  ||||| |||||||||||||| ||| ||||| |||||| |||||||| |||||||||    
T  24073634 cgccatcattaattatatatt-tttttttcaagattttatgtgccttcatctctccaaatggaagaaattgagaaacac 24073557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 41 - 219
Target Start/End: Complemental strand, 12153272 - 12153111
Alignment:
Q  41 ggtgaagatcctctccatttggcaaaataaatggagttttgtaagttggagagagatagacacaaaaaatagatggtaggtcctaccactaaatgggttc 140  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| |||||                     
T  12153272 ggtgaagatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaattagatggtgggtcc----------------- 12153190  T
Q  141 caccatcattaattatattttactttttccaagattttatgtgtctttatctccccaaattgaagaaatggagaaacac 219  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  12153189 caccatcattaattatattttacttttttcaagattttatgtgtctttatctctccaaattgaagaaatggagaaacac 12153111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 41 - 180
Target Start/End: Original strand, 12312432 - 12312572
Alignment:
Q  41 ggtgaagatcctctccatttggcaaaataaatggagttttgtaagttggagagagatagac-acaaaaaatagatggtaggtcctaccactaaatgggtt 139  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| | |||||||||||||| | |||||||||||| |||||     
T  12312432 ggtgaagatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacaaaaaaaaatagatggtggatcctaccactaagtgggtc 12312531  T
Q  140 ccaccatcattaattatattttactttttccaagattttat 180  Q
    ||| ||||||||||||||||||||||| |  ||||||||||    
T  12312532 ccatcatcattaattatattttactttctttaagattttat 12312572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 57 - 219
Target Start/End: Original strand, 47922052 - 47922210
Alignment:
Q  57 atttggcaaaataaatggagttttgtaagttggagagagatagacacaaaaaatagatggtaggtcctaccactaaatgggttccaccatcattaattat 156  Q
    ||||||||||||||||||| ||||| |||||    | ||||| ||||||||||||||| || |||| ||||||||| ||||||||||||||||||| |||    
T  47922052 atttggcaaaataaatggaattttgcaagtt----aaagataaacacaaaaaatagatagtgggtcttaccactaagtgggttccaccatcattaaatat 47922147  T
Q  157 attttactttttccaagattttatgtgtctttatctccccaaattgaagaaatggagaaacac 219  Q
    |||||| ||||| ||| |||||| ||||||||||||| | |||||||||||||||||||||||    
T  47922148 attttatttttttcaatattttacgtgtctttatctctctaaattgaagaaatggagaaacac 47922210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 119 - 219
Target Start/End: Original strand, 12241443 - 12241543
Alignment:
Q  119 ggtcctaccactaaatgggttccaccatcattaattatattttactttttccaagattttatgtgtctttatctccccaaattgaagaaatggagaaaca 218  Q
    |||||||||||||| ||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  12241443 ggtcctaccactaagtgggtcccaccatcattaattatattttacttttttcaagattttatgtgtctttatctctccaaattgaagaaatggagaaaca 12241542  T
Q  219 c 219  Q
    |    
T  12241543 c 12241543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 41 - 219
Target Start/End: Complemental strand, 52018881 - 52018723
Alignment:
Q  41 ggtgaagatcctctccatttggcaaaataaatggagttttgtaagttggagagagatagacacaaaaaatagatggtaggtcctaccactaaatgggttc 140  Q
    |||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||| |||||||||| || || | ||| ||||                
T  52018881 ggtgaagatcctctccatttagcaaaataaatggagttttgcaagttggagagagatagatacaaaaaataaatagtggatcccacca------------ 52018794  T
Q  141 caccatcattaattatattttactttttccaagattttatgtgtctttatctccccaaattgaagaaatggagaaacac 219  Q
            |||||||||||||||||||| ||||||||||||||| |||||||| |||||||||||||||||||||||||    
T  52018793 --------ttaattatattttacttttttcaagattttatgtgtttttatctctccaaattgaagaaatggagaaacac 52018723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 141 - 219
Target Start/End: Original strand, 17080697 - 17080775
Alignment:
Q  141 caccatcattaattatattttactttttccaagattttatgtgtctttatctccccaaattgaagaaatggagaaacac 219  Q
    |||||||||| ||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||    
T  17080697 caccatcattcattatattttactttttccaagattttatctgtctttatctctccaaattgaagaaatggagaaacac 17080775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 45 - 168
Target Start/End: Original strand, 47922327 - 47922451
Alignment:
Q  45 aagatcctctccatttggcaaaataaatggagttttgtaagttggagagagatagacacaaaa-aatagatggtaggtcctaccactaaatgggttccac 143  Q
    |||||||||||||||||  ||||||||| |||||||| || ||||||||| |||||||||||| |||||||||| |||||||||||||| ||||| |||     
T  47922327 aagatcctctccatttgctaaaataaattgagttttgcaatttggagagatatagacacaaaagaatagatggtgggtcctaccactaagtgggtcccat 47922426  T
Q  144 catcattaattatattttacttttt 168  Q
    ||||  ||||||| |||||||||||    
T  47922427 catctataattattttttacttttt 47922451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 41 - 108
Target Start/End: Complemental strand, 33524380 - 33524313
Alignment:
Q  41 ggtgaagatcctctccatttggcaaaataaatggagttttgtaagttggagagagatagacacaaaaa 108  Q
    |||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||| |||||||    
T  33524380 ggtgaagatcctctccatttggcaaaataaatggagatttggaagttggagagagatagatacaaaaa 33524313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 110 - 215
Target Start/End: Original strand, 31862246 - 31862351
Alignment:
Q  110 tagatggtaggtcctaccactaaatgggttccaccatcattaattatattttactttttccaagattttatgtgtctttatctccccaaattgaagaaat 209  Q
    |||||||| | |||||||||||| ||||| ||||||||||||||||| |||||||||||| || ||||| ||||||| |||||| |||||| | ||||||    
T  31862246 tagatggtggatcctaccactaagtgggtcccaccatcattaattattttttactttttctaaaattttgtgtgtctatatctctccaaatggtagaaat 31862345  T
Q  210 ggagaa 215  Q
     |||||    
T  31862346 agagaa 31862351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 152 - 219
Target Start/End: Original strand, 12312571 - 12312638
Alignment:
Q  152 attatattttactttttccaagattttatgtgtctttatctccccaaattgaagaaatggagaaacac 219  Q
    ||||||||||||||||| ||| |||||||||||||||||||| | |||||||||||||||||||||||    
T  12312571 attatattttacttttttcaaaattttatgtgtctttatctctctaaattgaagaaatggagaaacac 12312638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 86 - 161
Target Start/End: Original strand, 56269078 - 56269153
Alignment:
Q  86 ttggagagagatagacacaaaaaatagatggtaggtcctaccactaaatgggttccaccatcattaattatatttt 161  Q
    ||||||||||||||||||||||||||  |||| |||||||||||||| ||||| ||||||||||||||||| ||||    
T  56269078 ttggagagagatagacacaaaaaataagtggtgggtcctaccactaagtgggtcccaccatcattaattatttttt 56269153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 86 - 168
Target Start/End: Complemental strand, 42010190 - 42010108
Alignment:
Q  86 ttggagagagatagacacaaaaaatagatggtaggtcctaccactaaatgggttccaccatcattaattatattttacttttt 168  Q
    ||||||||||||||| ||||||||||  |||  ||||||| |||||||||||| ||||||||||||||||| |||||||||||    
T  42010190 ttggagagagatagatacaaaaaataagtggcgggtcctatcactaaatgggtcccaccatcattaattattttttacttttt 42010108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 86 - 168
Target Start/End: Original strand, 56453822 - 56453904
Alignment:
Q  86 ttggagagagatagacacaaaaaatagatggtaggtcctaccactaaatgggttccaccatcattaattatattttacttttt 168  Q
    ||||||||||||||||||||||||||| |||| ||||||| || ||| ||||| ||||||||||| ||||| |||||||||||    
T  56453822 ttggagagagatagacacaaaaaataggtggtgggtcctatcattaagtgggtcccaccatcattcattattttttacttttt 56453904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 47 - 200
Target Start/End: Complemental strand, 1871388 - 1871237
Alignment:
Q  47 gatcctctccatttggcaaaataaatggagttttgtaagttggagagagatagacacaaaaaatagatggtaggtcctaccactaaatgggttccaccat 146  Q
    ||||||||| ||||| ||||||||||||||| | | || ||||||||||||||||| |||| |||||| || | |||||| ||||| ||||| ||| |||    
T  1871388 gatcctctcaatttgacaaaataaatggagtat-gcaatttggagagagatagacaaaaaatatagatagtggatcctactactaagtgggtcccatcat 1871290  T
Q  147 cattaattatattttactttttccaagattttatgtgtctttatctccccaaat 200  Q
    |||||||||| || || ||||| |||  || | |||||||||||||| ||||||    
T  1871289 cattaattattttata-ttttttcaaatttctttgtgtctttatctctccaaat 1871237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 86 - 168
Target Start/End: Complemental strand, 5524520 - 5524438
Alignment:
Q  86 ttggagagagatagacacaaaaaatagatggtaggtcctaccactaaatgggttccaccatcattaattatattttacttttt 168  Q
    ||||||||||||||||| ||||||||  |||| ||||||| || ||| ||||| ||||||||||||||||| |||||||||||    
T  5524520 ttggagagagatagacataaaaaataagtggtgggtcctatcagtaagtgggtcccaccatcattaattattttttacttttt 5524438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 45 - 214
Target Start/End: Complemental strand, 23474224 - 23474056
Alignment:
Q  45 aagatcctctccatttggcaaaataaatggagttttgtaagttggagagagatagacacaaaaaatagatggtaggtcctaccactaaatgggttccacc 144  Q
    |||||||||||||||| ||| |||||||||||| | | || |||| |||||||||||||| |||||||||||| |||||||| | | | ||  | |||||    
T  23474224 aagatcctctccatttagcataataaatggagtat-gcaatttggggagagatagacacataaaatagatggtgggtcctactattgagtgaatcccacc 23474126  T
Q  145 atcattaattatattttactttttccaagattttatgtgtctttatctccccaaattgaagaaatggaga 214  Q
    |||||||||||  ||||| |||||  ||  |||| ||||| | |||||| |||||| || |||| |||||    
T  23474125 atcattaattactttttaattttttgaattttttgtgtgtttatatctctccaaatggatgaaagggaga 23474056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 92 - 156
Target Start/End: Complemental strand, 38865344 - 38865280
Alignment:
Q  92 agagatagacacaaaaaatagatggtaggtcctaccactaaatgggttccaccatcattaattat 156  Q
    ||||||||||||||||||||  ||||||||||||||| ||||| ||||||| |||||||||||||    
T  38865344 agagatagacacaaaaaatatgtggtaggtcctaccattaaataggttccagcatcattaattat 38865280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 67 - 156
Target Start/End: Complemental strand, 26429061 - 26428971
Alignment:
Q  67 ataaatggagttttgtaagttggagagagatagacacaaaa-aatagatggtaggtcctaccactaaatgggttccaccatcattaattat 156  Q
    ||||||| ||||||| || ||||||| |||||||||||||| ||||||||||  ||||||||||| |||||||  || |||||||||||||    
T  26429061 ataaatgaagttttgcaatttggagaaagatagacacaaaagaatagatggtgagtcctaccactgaatgggtctcatcatcattaattat 26428971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 86 - 168
Target Start/End: Original strand, 37002253 - 37002335
Alignment:
Q  86 ttggagagagatagacacaaaaaatagatggtaggtcctaccactaaatgggttccaccatcattaattatattttacttttt 168  Q
    ||||| ||||||||||||||||||||  |||| | |||||  ||||| ||||| ||||||||||||||||| |||||||||||    
T  37002253 ttggaaagagatagacacaaaaaataagtggtggatcctattactaagtgggtcccaccatcattaattattttttacttttt 37002335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 100 - 215
Target Start/End: Original strand, 25442190 - 25442306
Alignment:
Q  100 acacaaaaaatagatggtaggtcctaccactaaatgggttccaccatcattaattatatttta-ctttttccaagattttatgtgtctttatctccccaa 198  Q
    ||||||||||||||| || |||||||||||||| ||| |  ||||  |||||||||| ||||| ||||||  |  ||| | |||||||||||||| ||||    
T  25442190 acacaaaaaatagattgtgggtcctaccactaagtggatctcaccgacattaattattttttaactttttttataattgtgtgtgtctttatctctccaa 25442289  T
Q  199 attgaagaaatggagaa 215  Q
    || ||||||||||||||    
T  25442290 atggaagaaatggagaa 25442306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 130 - 214
Target Start/End: Original strand, 33841850 - 33841934
Alignment:
Q  130 taaatgggttccaccatcattaattatattttactttttccaagattttatgtgtctttatctccccaaattgaagaaatggaga 214  Q
    ||||||||| |||||||||||||||||  | |||| ||| ||||||||| |||||||||||||  |||||| || ||||||||||    
T  33841850 taaatgggtcccaccatcattaattattgtatactcttttcaagattttttgtgtctttatctttccaaatggaggaaatggaga 33841934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 119 - 213
Target Start/End: Complemental strand, 3326557 - 3326462
Alignment:
Q  119 ggtcctaccactaaatgggttccaccatcattaattatattttactttttccaagattttatgtgtc-tttatctccccaaattgaagaaatggag 213  Q
    |||| ||||| ||||||||||||||||| ||||||||| ||||||||||| ||| | ||| | |||| |||||||| | ||||| |||||||||||    
T  3326557 ggtcataccattaaatgggttccaccattattaattattttttacttttttcaaaactttttttgtcttttatctctcaaaattaaagaaatggag 3326462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 86 - 156
Target Start/End: Original strand, 36688190 - 36688260
Alignment:
Q  86 ttggagagagatagacacaaaaaatagatggtaggtcctaccactaaatgggttccaccatcattaattat 156  Q
    ||||||||||||||||||||||||||  || |  |||||| |||||| ||||| |||||||||||||||||    
T  36688190 ttggagagagatagacacaaaaaataagtgttgagtcctatcactaagtgggtcccaccatcattaattat 36688260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 45 - 162
Target Start/End: Original strand, 48914480 - 48914596
Alignment:
Q  45 aagatcctctccatttggcaaaataaatggagttttgtaagttggagagagatagacacaaaaaatagatggtaggtcctaccactaaatgggttccacc 144  Q
    |||||| ||||||||| |||||||||||||||  | | || || ||||||||| |||||| ||||||||| || ||||||| ||  || |||||||| |     
T  48914480 aagatcttctccatttagcaaaataaatggagaat-gcaatttagagagagatcgacacataaaatagattgtgggtcctatcataaagtgggttccgct 48914578  T
Q  145 atcattaattatatttta 162  Q
    |||||||||||| |||||    
T  48914579 atcattaattatttttta 48914596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 49 - 128
Target Start/End: Complemental strand, 34927596 - 34927516
Alignment:
Q  49 tcctctccatttggcaaaataaatggagttttgtaagttggagagagatagacacaaaa-aatagatggtaggtcctacca 128  Q
    ||||||||||||   ||||||||||| |||||| || ||  |||||||||||||||||| |||||||||| ||||||||||    
T  34927596 tcctctccatttactaaaataaatggggttttgcaatttaaagagagatagacacaaaagaatagatggtgggtcctacca 34927516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 142 - 193
Target Start/End: Original strand, 43447638 - 43447690
Alignment:
Q  142 accatcattaattatattttactttttccaaga-ttttatgtgtctttatctc 193  Q
    ||||||||||||||||||||||||||| ||| | |||||||||||||||||||    
T  43447638 accatcattaattatattttacttttttcaaaatttttatgtgtctttatctc 43447690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 92 - 168
Target Start/End: Original strand, 48084533 - 48084609
Alignment:
Q  92 agagatagacacaaaaaatagatggtaggtcctaccactaaatgggttccaccatcattaattatattttacttttt 168  Q
    ||||||||||| |||| |||  |||| ||| ||| |||||| ||||| ||||||||||||||||| |||||||||||    
T  48084533 agagatagacataaaacataagtggtgggttctagcactaagtgggtcccaccatcattaattattttttacttttt 48084609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 45 - 168
Target Start/End: Complemental strand, 36532738 - 36532617
Alignment:
Q  45 aagatcctctccatttggcaaaataaatggagttttgtaagttggagagagatagacacaaaaaatagatggtaggtcctaccactaaatgggttccacc 144  Q
    |||||||||||||| ||  |||||||||||||||    || || |||||||||||||||| |||||| || || | ||||| || | | |||||||||||    
T  36532738 aagatcctctccatctgataaaataaatggagttcac-aatttagagagagatagacacataaaataaatagtggatcctatcattcagtgggttccacc 36532640  T
Q  145 atcattaattatattttacttttt 168  Q
    || ||||||||| |||||||||||    
T  36532639 at-attaattattttttacttttt 36532617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 86 - 151
Target Start/End: Complemental strand, 17493076 - 17493010
Alignment:
Q  86 ttggagagagatagacacaaaaaa-tagatggtaggtcctaccactaaatgggttccaccatcatta 151  Q
    |||||||||||||||||||||||| ||  |||| ||||||| |||||| ||| ||||||||||||||    
T  17493076 ttggagagagatagacacaaaaaaataagtggtgggtcctatcactaagtggattccaccatcatta 17493010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 86 - 168
Target Start/End: Original strand, 42844189 - 42844271
Alignment:
Q  86 ttggagagagatagacacaaaaaatagatggtaggtcctaccactaaatgggttccaccatcattaattatattttacttttt 168  Q
    ||||||| ||||||||||| ||||||||  ||  ||||||| | ||||||| | || |||||||||||||| |||||||||||    
T  42844189 ttggagatagatagacacataaaatagagagtgtgtcctactattaaatggatccctccatcattaattattttttacttttt 42844271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 89 - 161
Target Start/End: Original strand, 1015859 - 1015931
Alignment:
Q  89 gagagagatagacacaaaaaatagatggtaggtcctaccactaaatgggttccaccatcattaattatatttt 161  Q
    |||||||||||||||||||||||  |||| ||||| | || ||  ||||| ||||||||||||||||| ||||    
T  1015859 gagagagatagacacaaaaaataagtggtgggtcccatcattaggtgggtcccaccatcattaattatttttt 1015931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 137 - 193
Target Start/End: Complemental strand, 5817308 - 5817252
Alignment:
Q  137 gttccaccatcattaattatattttactttttccaagattttatgtgtctttatctc 193  Q
    |||||||||||||||||||  || || ||||||||||||||| ||||| ||||||||    
T  5817308 gttccaccatcattaattactttgtattttttccaagattttttgtgtttttatctc 5817252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 79 - 151
Target Start/End: Complemental strand, 25219077 - 25219003
Alignment:
Q  79 ttgtaagttggagagagatagacacaa--aaaatagatggtaggtcctaccactaaatgggttccaccatcatta 151  Q
    |||||| ||||||||||||||||||||  ||||||  |||| ||||||| |||||| ||| | ||||||||||||    
T  25219077 ttgtaatttggagagagatagacacaaaaaaaataagtggtgggtcctatcactaagtggatcccaccatcatta 25219003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 152 - 215
Target Start/End: Complemental strand, 26428650 - 26428587
Alignment:
Q  152 attatattttactttttccaagattttatgtgtctttatctccccaaattgaagaaatggagaa 215  Q
    ||||| ||||||||||| ||| | ||| ||||||| |||||| |||||||| ||||||||||||    
T  26428650 attattttttacttttttcaaaaatttgtgtgtctatatctctccaaattgtagaaatggagaa 26428587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 168
Target Start/End: Complemental strand, 5261183 - 5261107
Alignment:
Q  92 agagatagacacaaaaaatagatggtaggtcctaccactaaatgggttccaccatcattaattatattttacttttt 168  Q
    |||||||||||||||||||   | || ||| ||| ||||||||| |||||| | ||||||||||  |||||||||||    
T  5261183 agagatagacacaaaaaattagtagtgggtgctatcactaaatgagttccatcctcattaattaatttttacttttt 5261107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 143; Significance: 3e-75; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 41 - 219
Target Start/End: Complemental strand, 208181 - 208003
Alignment:
Q  41 ggtgaagatcctctccatttggcaaaataaatggagttttgtaagttggagagagatagacacaaaaaatagatggtaggtcctaccactaaatgggttc 140  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||| |||||||||||||| ||||| |    
T  208181 ggtgaagatcctctccatttggcaaaataaatggagttttgcaagttggagagagataaacacaaaaaatagatggtgggtcctaccactaagtgggtcc 208082  T
Q  141 caccatcattaattatattttactttttccaagattttatgtgtctttatctccccaaattgaagaaatggagaaacac 219  Q
    || |||||||||||||||||||||||||  ||||||||||||||||||||||| |||||||||||||||||||||||||    
T  208081 catcatcattaattatattttactttttttaagattttatgtgtctttatctctccaaattgaagaaatggagaaacac 208003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 143; Significance: 3e-75; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 41 - 219
Target Start/End: Original strand, 30426626 - 30426804
Alignment:
Q  41 ggtgaagatcctctccatttggcaaaataaatggagttttgtaagttggagagagatagacacaaaaaatagatggtaggtcctaccactaaatgggttc 140  Q
    |||||||| ||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| |    
T  30426626 ggtgaagaccctctccatttggcaaaataaatggtgttttgcaagttggagagagatagacacaaaaaatagatggtgggtcctaccactaagtgggtcc 30426725  T
Q  141 caccatcattaattatattttactttttccaagattttatgtgtctttatctccccaaattgaagaaatggagaaacac 219  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||    
T  30426726 caccatcattaattatattttacttttttcaagattttatgtgtctttatctctccaaattgaagaaatggaaaaacac 30426804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 41 - 219
Target Start/End: Complemental strand, 36991474 - 36991296
Alignment:
Q  41 ggtgaagatcctctccatttggcaaaataaatggagttttgtaagttggagagagatagacacaaaaaatagatggtaggtcctaccactaaatgggttc 140  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| || ||||||||| | |||||||||||||| ||||| |    
T  36991474 ggtgaagatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacataagaaatagatgatgggtcctaccactaagtgggtcc 36991375  T
Q  141 caccatcattaattatattttactttttccaagattttatgtgtctttatctccccaaattgaagaaatggagaaacac 219  Q
    |||||||||||||||||||| ||||||| |||||||||| ||||||||||||| |||||||||||||||||||||||||    
T  36991374 caccatcattaattatatttgacttttttcaagattttacgtgtctttatctctccaaattgaagaaatggagaaacac 36991296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 41 - 219
Target Start/End: Complemental strand, 28069837 - 28069659
Alignment:
Q  41 ggtgaagatcctctccatttggcaaaataaatggagttttgtaagttggagagagatagacacaaaaaatagatggtaggtcctaccactaaatgggttc 140  Q
    |||||||||||||||||||||||||||||||||||| |||| |||||||||||||| |||||||||||||||||||| |||||||||||||| ||||| |    
T  28069837 ggtgaagatcctctccatttggcaaaataaatggagatttgcaagttggagagagaaagacacaaaaaatagatggtgggtcctaccactaagtgggtcc 28069738  T
Q  141 caccatcattaattatattttactttttccaagattttatgtgtctttatctccccaaattgaagaaatggagaaacac 219  Q
    |||||||||||||||||||||| ||||| |||||||||||||||||||||||| |||||| |||||||| || ||||||    
T  28069737 caccatcattaattatattttatttttttcaagattttatgtgtctttatctctccaaatggaagaaattgaaaaacac 28069659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 41 - 212
Target Start/End: Original strand, 40695205 - 40695375
Alignment:
Q  41 ggtgaagatcctctccatttggcaaaataaatggagttttgtaagttggagagagatagacacaaaaaatagatggtaggtcctaccactaaatgggttc 140  Q
    |||||||||| ||||||||| |||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||| || ||||    
T  40695205 ggtgaagatcttctccatttagcaaaataaatggagtttgg-aagttggagagagatagacacaaaaaatagatggtaggtcctaccactaagtgagttc 40695303  T
Q  141 caccatcattaattatattttactttttccaagattttatgtgtctttatctccccaaattgaagaaatgga 212  Q
    ||||||||||| |||||||||||||||| ||||||||||||| |||||||| | ||||||||||||||||||    
T  40695304 caccatcattagttatattttacttttttcaagattttatgtttctttatccctccaaattgaagaaatgga 40695375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 48 - 219
Target Start/End: Complemental strand, 41511373 - 41511202
Alignment:
Q  48 atcctctccatttggcaaaataaatggagttttgtaagttggagagagatagacacaaaaaatagatggtaggtcctaccactaaatgggttccaccatc 147  Q
    ||||||||| |||  ||||||||||||||||||| |||||||| ||||||||| | ||||||||||| || ||||||| |||||| ||| ||||||||||    
T  41511373 atcctctccgtttaacaaaataaatggagttttgcaagttggaaagagatagatataaaaaatagatagtgggtcctatcactaagtggtttccaccatc 41511274  T
Q  148 attaattatattttactttttccaagattttatgtgtctttatctccccaaattgaagaaatggagaaacac 219  Q
    ||||||||||||||||||||| ||||||||||||||| |||||||| |||||||||||||||||| ||||||    
T  41511273 attaattatattttacttttttcaagattttatgtgtttttatctctccaaattgaagaaatggaaaaacac 41511202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 41 - 219
Target Start/End: Original strand, 10652574 - 10652753
Alignment:
Q  41 ggtgaagatcctctccatttggcaaaataaatggagttttgtaagttggagagagatagacacaaaaaatagatggtaggtcctaccactaaatgggttc 140  Q
    |||||||||||||||||||||| ||||||||||| |||||| |||||||||||||||||| ||||||||| |||||| |||| ||| ||||| ||||| |    
T  10652574 ggtgaagatcctctccatttggtaaaataaatggtgttttgcaagttggagagagatagatacaaaaaattgatggtgggtcatactactaattgggtcc 10652673  T
Q  141 caccatcattaattata-ttttac-tttttccaagattttatgtgtctttatctccccaaattgaagaaatggagaaacac 219  Q
    ||||||||||||||||| |||||| ||||| ||| ||||||||||| |||||||| |||||||||||||||| ||||||||    
T  10652674 caccatcattaattatatttttactttttttcaaaattttatgtgt-tttatctctccaaattgaagaaatgaagaaacac 10652753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 41 - 219
Target Start/End: Original strand, 10672471 - 10672647
Alignment:
Q  41 ggtgaagatcctctccatttggcaaaataaatggagttttgtaagttggagagagatagacacaaaaaatagatggtaggtcctaccactaaatgggttc 140  Q
    ||||||||| ||||||||||||||||||||||||||||||| ||||||||||  ||||||||||||||||||||||| | |||||||||||| || || |    
T  10672471 ggtgaagattctctccatttggcaaaataaatggagttttgcaagttggaga--gatagacacaaaaaatagatggtggatcctaccactaagtgagtcc 10672568  T
Q  141 caccatcattaattatattttactttttccaagattttatgtgtctttatctccccaaattgaagaaatggagaaacac 219  Q
    |||||||||||||||||||||||  |||  || ||||||||| | |||||||| |||||||||| ||||| ||||||||    
T  10672569 caccatcattaattatattttaccctttttaaaattttatgtatttttatctctccaaattgaataaatgaagaaacac 10672647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 43 - 219
Target Start/End: Original strand, 44859128 - 44859302
Alignment:
Q  43 tgaagatcctctccatttggcaaaataaatggagttttgtaagttggagagagatagacacaaaaaatagatggtaggtcctaccactaaatgggttcca 142  Q
    ||||||||||||| ||||| ||||||||||||||||||| ||||| |||||||||||||   ||||||||||||| ||| |||||||||| ||||| |||    
T  44859128 tgaagatcctctctatttgacaaaataaatggagttttgcaagttagagagagatagact--aaaaatagatggtgggttctaccactaagtgggtccca 44859225  T
Q  143 ccatcattaattatattttactttttccaagattttatgtgtctttatctccccaaattgaagaaatggagaaacac 219  Q
    |||||||||||||||||||| |||||  || |||| | ||||||||||||| ||||||| |||||| ||| ||||||    
T  44859226 ccatcattaattatattttattttttaaaaaatttcacgtgtctttatctctccaaattaaagaaaaggaaaaacac 44859302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 42 - 219
Target Start/End: Original strand, 28318854 - 28319037
Alignment:
Q  42 gtgaagatcctctccatttggcaaaataaatggagttttgtaagttggagagagatagacacaaaaaata------gatggtaggtcctaccactaaatg 135  Q
    ||||||||| |||  |||||| |||||||||||||||||| ||||| |||||||||| ||| ||||||||      ||| || |||||||||||||| ||    
T  28318854 gtgaagatcttctttatttggtaaaataaatggagttttgcaagtttgagagagatatacaaaaaaaataaaaaaagatagtgggtcctaccactaagtg 28318953  T
Q  136 ggttccaccatcattaattatattttactttttccaagattttatgtgtctttatctccccaaattgaagaaatggagaaacac 219  Q
    ||| | |||||||||||||||||||||||||||  || ||||||||||||||| |||| |||||||||||||||||||||||||    
T  28318954 ggtccaaccatcattaattatattttactttttttaaaattttatgtgtctttgtctctccaaattgaagaaatggagaaacac 28319037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 76 - 219
Target Start/End: Complemental strand, 24102099 - 24101956
Alignment:
Q  76 gttttgtaagttggagagagatagacacaaaaaatagatggtaggtcctaccactaaatgggttccaccatcattaattatattttactttttccaagat 175  Q
    |||||| |||||  ||||||||||||| |||||||||||||| | |||||||||||| || |||||||||||||||||||||||| | ||||| ||||||    
T  24102099 gttttgcaagtttaagagagatagacataaaaaatagatggtggatcctaccactaagtgagttccaccatcattaattatatttcatttttttcaagat 24102000  T
Q  176 tttatgtgtctttatctccccaaattgaagaaatggagaaacac 219  Q
    |||| ||||||||||||| ||||||| || |||| || ||||||    
T  24101999 tttacgtgtctttatctctccaaattaaaaaaatagaaaaacac 24101956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 45 - 200
Target Start/End: Complemental strand, 45113385 - 45113229
Alignment:
Q  45 aagatcctctccatttggcaaaataaatggagttttgtaagttggagagagatagacacaaaa-aatagatggtaggtcctaccactaaatgggttccac 143  Q
    |||||||||||||||||  ||||||||| | |||||| || ||||||||| |||||||||||| |||||||||| ||||| |||||||| || || |||     
T  45113385 aagatcctctccatttgctaaaataaattgtgttttgcaatttggagagacatagacacaaaagaatagatggtgggtccaaccactaagtgtgtcccat 45113286  T
Q  144 catcattaattatattttactttttccaagattttatgtgtctttatctccccaaat 200  Q
    ||||||||||||| ||||| ||||| ||| ||||||||||||| |||||| ||||||    
T  45113285 catcattaattattttttatttttttcaaaattttatgtgtctatatctctccaaat 45113229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 45 - 216
Target Start/End: Original strand, 37966405 - 37966574
Alignment:
Q  45 aagatcctctccatttggcaaaataaatggagttttgtaagttggagagagatagacacaaaaaatagatggtaggtcctaccactaaatgggttccacc 144  Q
    ||||||||||||||||||||||||||||||| ||| | || ||| ||||||||| ||||||||||||||| ||||||||||||||| ||| |   |||      
T  37966405 aagatcctctccatttggcaaaataaatggaattt-gcaatttgaagagagataaacacaaaaaatagattgtaggtcctaccact-aattgaacccaat 37966502  T
Q  145 atcattaattatattttactttttccaagattttatgtgtctttatctccccaaattgaagaaatggagaaa 216  Q
    | ||||||||||||||||||||||  ||  |||||||| |||||||||| ||||||  ||||||||||||||    
T  37966503 accattaattatattttactttttttaaatttttatgtatctttatctctccaaataaaagaaatggagaaa 37966574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 45 - 209
Target Start/End: Complemental strand, 6014309 - 6014144
Alignment:
Q  45 aagatcctctccatttggcaaaataaatggagttttgtaagttggagagagatagacacaaaa-aatagatggtaggtcctaccactaaatgggttccac 143  Q
    |||||||||||||||||  ||||||||| |||||||| || ||||||| |||||||||||||| |||||||| |||||||||||| ||| ||| | | |     
T  6014309 aagatcctctccatttgctaaaataaatagagttttgcaatttggagaaagatagacacaaaagaatagatgataggtcctaccattaagtggatcctat 6014210  T
Q  144 catcattaattatattttactttttccaagattttatgtgtctttatctccccaaattgaagaaat 209  Q
     |||||||||||| |||||||||||  || | ||| ||||||| || ||| |||||| | ||||||    
T  6014209 tatcattaattatgttttacttttttgaaaactttgtgtgtctatacctctccaaatggtagaaat 6014144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 41 - 101
Target Start/End: Complemental strand, 5033370 - 5033310
Alignment:
Q  41 ggtgaagatcctctccatttggcaaaataaatggagttttgtaagttggagagagatagac 101  Q
    |||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||    
T  5033370 ggtgaagatcctttccatttggcaaaataaatggagttttgcaagttggagagagatagac 5033310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 90 - 214
Target Start/End: Complemental strand, 42761782 - 42761660
Alignment:
Q  90 agagagatagacacaaaaaatagatggtaggtcctaccactaaatgggttccaccatcattaattatattttactttttccaagattttatgtgtcttta 189  Q
    ||||||||||||||| ||||||||| || | |||||||||| | ||||||||| ||||||||||||| ||||| |||||||||  |||| || |||| ||    
T  42761782 agagagatagacacataaaatagatagtggatcctaccactcagtgggttccatcatcattaattattttttaatttttccaa-tttttttgagtctata 42761684  T
Q  190 tctccccaaattgaagaaatggaga 214  Q
    |||| || |||||||||||||||||    
T  42761683 tctctcc-aattgaagaaatggaga 42761660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 86 - 168
Target Start/End: Original strand, 26749550 - 26749632
Alignment:
Q  86 ttggagagagatagacacaaaaaatagatggtaggtcctaccactaaatgggttccaccatcattaattatattttacttttt 168  Q
    ||||||||||||||||||||||||||  || | ||||||| |||||| ||||| ||||||||||||||||| |||||||||||    
T  26749550 ttggagagagatagacacaaaaaataagtgatgggtcctatcactaagtgggtcccaccatcattaattattttttacttttt 26749632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 140 - 219
Target Start/End: Original strand, 12177620 - 12177699
Alignment:
Q  140 ccaccatcattaattatattttactttttccaagattttatgtgtctttatctccccaaattgaagaaatggagaaacac 219  Q
    |||||||||||| |||||||||| ||||| ||||||||||  |||| |||||||   |||||||||||||||||||||||    
T  12177620 ccaccatcattagttatattttatttttttcaagattttaattgtccttatctctttaaattgaagaaatggagaaacac 12177699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 140 - 219
Target Start/End: Original strand, 12422048 - 12422127
Alignment:
Q  140 ccaccatcattaattatattttactttttccaagattttatgtgtctttatctccccaaattgaagaaatggagaaacac 219  Q
    |||||||||||| |||||||||| ||||| ||||||||||  |||| |||||||   |||||||||||||||||||||||    
T  12422048 ccaccatcattagttatattttatttttttcaagattttaattgtccttatctctttaaattgaagaaatggagaaacac 12422127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 168 - 218
Target Start/End: Complemental strand, 5033097 - 5033047
Alignment:
Q  168 tccaagattttatgtgtctttatctccccaaattgaagaaatggagaaaca 218  Q
    ||||| |||||||||||||||||||| ||||||||||||||||||||||||    
T  5033097 tccaaaattttatgtgtctttatctctccaaattgaagaaatggagaaaca 5033047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 118 - 216
Target Start/End: Complemental strand, 8412295 - 8412197
Alignment:
Q  118 aggtcctaccactaaatgggttccaccatcattaattatattttactttttccaagattttatgtgtctttatctccccaaattgaagaaatggagaaa 216  Q
    ||||||||||||||| | | |  ||||||| |||||||||||||||||||| ||| ||||||||||| |||||||| | |||| ||| ||||| |||||    
T  8412295 aggtcctaccactaagtagatctcaccatcgttaattatattttacttttttcaatattttatgtgtatttatctctctaaatggaaaaaatgaagaaa 8412197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 79 - 161
Target Start/End: Complemental strand, 34612644 - 34612562
Alignment:
Q  79 ttgtaagttggagagagatagacacaaaaaatagatggtaggtcctaccactaaatgggttccaccatcattaattatatttt 161  Q
    |||||| || |||||||||||||||||||||||  |||| ||||||| |||||| |||||  |||||||||||||||| ||||    
T  34612644 ttgtaatttagagagagatagacacaaaaaataagtggtgggtcctatcactaagtgggtctcaccatcattaattatttttt 34612562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 86 - 168
Target Start/End: Original strand, 1937156 - 1937239
Alignment:
Q  86 ttggagagagatagacacaaaaaataga-tggtaggtcctaccactaaatgggttccaccatcattaattatattttacttttt 168  Q
    ||||||||||||||||||||||||   | |||| ||||||| ||||||  |||| ||||||||||||||||| |||||||||||    
T  1937156 ttggagagagatagacacaaaaaaacaagtggtgggtcctatcactaagcgggtcccaccatcattaattattttttacttttt 1937239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 145 - 216
Target Start/End: Original strand, 27490067 - 27490138
Alignment:
Q  145 atcattaattatattttactttttccaagattttatgtgtctttatctccccaaattgaagaaatggagaaa 216  Q
    |||||||||||||||||||||||| ||||||||||||| | ||| ||||  ||||| |||||||| ||||||    
T  27490067 atcattaattatattttacttttttcaagattttatgtatttttgtctcttcaaatggaagaaattgagaaa 27490138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 93 - 132
Target Start/End: Complemental strand, 5033150 - 5033111
Alignment:
Q  93 gagatagacacaaaaaatagatggtaggtcctaccactaa 132  Q
    ||||||||||||||||||||||||| ||||||||||||||    
T  5033150 gagatagacacaaaaaatagatggtgggtcctaccactaa 5033111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 52 - 155
Target Start/End: Complemental strand, 18689597 - 18689495
Alignment:
Q  52 tctccatttggcaaaataaatggagttttgtaagttggagagagatagacacaaaaaatagatggtaggtcctaccactaaatgggttccaccatcatta 151  Q
    |||| |||| |||||||||||||| | | | || ||||||||||||| ||| | ||||||||| || | |||||||| ||| ||||||||| ||||||||    
T  18689597 tctcgatttagcaaaataaatggaatat-gcaatttggagagagataaacatataaaatagatagtggatcctaccattaagtgggttccatcatcatta 18689499  T
Q  152 atta 155  Q
    ||||    
T  18689498 atta 18689495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 86 - 168
Target Start/End: Original strand, 3763524 - 3763606
Alignment:
Q  86 ttggagagagatagacacaaaaaatagatggtaggtcctaccactaaatgggttccaccatcattaattatattttacttttt 168  Q
    |||||||| | |||||| |||||| || |||| |||||||||| ||| ||||||||||| |||||||||   |||||||||||    
T  3763524 ttggagagtggtagacaaaaaaaaaaggtggtgggtcctaccattaagtgggttccaccgtcattaattgctttttacttttt 3763606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 75 - 117
Target Start/End: Original strand, 12177572 - 12177614
Alignment:
Q  75 agttttgtaagttggagagagatagacacaaaaaatagatggt 117  Q
    ||||||| |||||||||||||||||| ||||||||||||||||    
T  12177572 agttttgcaagttggagagagatagatacaaaaaatagatggt 12177614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 75 - 117
Target Start/End: Original strand, 12422000 - 12422042
Alignment:
Q  75 agttttgtaagttggagagagatagacacaaaaaatagatggt 117  Q
    ||||||| |||||||||||||||||| ||||||||||||||||    
T  12422000 agttttgcaagttggagagagatagatacaaaaaatagatggt 12422042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 168
Target Start/End: Complemental strand, 6399991 - 6399915
Alignment:
Q  92 agagatagacacaaaaaatagatggtaggtcctaccactaaatgggttccaccatcattaattatattttacttttt 168  Q
    |||||||||||||||||||||||||| |||| ||  || || ||| | |||  |||||||||||| |||||||||||    
T  6399991 agagatagacacaaaaaatagatggtgggtcttattaccaagtggatcccattatcattaattattttttacttttt 6399915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 168
Target Start/End: Complemental strand, 30796344 - 30796269
Alignment:
Q  92 agagatagacacaaaaaatagatggtaggtcctaccactaaatgggttccaccatcattaattatattttacttttt 168  Q
    |||||||||| | ||||||| ||||  |||| || |||||| ||||| ||||||||||||||||| |||||||||||    
T  30796344 agagatagacgctaaaaataaatggcgggtc-tatcactaagtgggtcccaccatcattaattattttttacttttt 30796269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 86 - 208
Target Start/End: Original strand, 36748494 - 36748611
Alignment:
Q  86 ttggagagagatagacacaaaaaatagatggtaggtcctaccactaaatgggttccaccatcattaattatattttactttttccaagattttatgtgtc 185  Q
    ||||||| ||||||||||||||| ||||  |  |||||||||| ||| ||| | ||||||||||||||  |||||||  |||| |||| || | ||||||    
T  36748494 ttggagatagatagacacaaaaa-tagacagcgggtcctaccattaagtggatcccaccatcattaat--tatttta--tttttcaagcttctctgtgtc 36748588  T
Q  186 tttatctccccaaattgaagaaa 208  Q
    |||||||| |||||| |||||||    
T  36748589 tttatctctccaaatggaagaaa 36748611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 151
Target Start/End: Original strand, 17867661 - 17867727
Alignment:
Q  86 ttggagagagatagacac-aaaaaatagatggtaggtcctaccactaaatgggttccaccatcatta 151  Q
    |||||||||||||||||| ||||||||  |||| ||||||| |||||| ||| | ||||||||||||    
T  17867661 ttggagagagatagacacaaaaaaataagtggtgggtcctatcactaagtggatcccaccatcatta 17867727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 143; Significance: 3e-75; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 41 - 219
Target Start/End: Complemental strand, 7362685 - 7362508
Alignment:
Q  41 ggtgaagatcctctccatttggcaaaataaatggagttttgtaagttggagagagatagacacaaaaaatagatggtaggtcctaccactaaatgggttc 140  Q
    |||||||||| |||||||||| ||||||||||||||||||| || |||||||||||||||||||||||||||||||| |||| |||||||||||||||||    
T  7362685 ggtgaagatc-tctccatttgacaaaataaatggagttttgcaaattggagagagatagacacaaaaaatagatggtgggtcgtaccactaaatgggttc 7362587  T
Q  141 caccatcattaattatattttactttttccaagattttatgtgtctttatctccccaaattgaagaaatggagaaacac 219  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  7362586 caccatcattaattatattttacttttttcaagattttatgtgtctttatctctccaaattgaagaaatggagaaacac 7362508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 41 - 219
Target Start/End: Complemental strand, 21151270 - 21151092
Alignment:
Q  41 ggtgaagatcctctccatttggcaaaataaatggagttttgtaagttggagagagatagacacaaaaaatagatggtaggtcctaccactaaatgggttc 140  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||  | |||||||||||| ||||| |    
T  21151270 ggtgaagatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaagaaatagatggaggatcctaccactaagtgggtcc 21151171  T
Q  141 caccatcattaattatattttactttttccaagattttatgtgtctttatctccccaaattgaagaaatggagaaacac 219  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  21151170 caccatcattaattatattttacttttttcaagattttatgtgtctttatctctccaaattgaagaaatggagaaacac 21151092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 41 - 218
Target Start/End: Original strand, 9559011 - 9559188
Alignment:
Q  41 ggtgaagatcctctccatttggcaaaataaatggagttttgtaagttggagagagatagacacaaaaaatagatggtaggtcctaccactaaatgggttc 140  Q
    |||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||| |||||||||||||||| |||||||||||||| ||||| |    
T  9559011 ggtgaagatcctctccatttggcaaaataaatggagatttgcaagttggagagagatagatacaaaaaatagatggtgggtcctaccactaagtgggtcc 9559110  T
Q  141 caccatcattaattatattttactttttccaagattttatgtgtctttatctccccaaattgaagaaatggagaaaca 218  Q
    |||||||||||||||||||||| ||||| |||||||||||||||||||||||| |||||| |||||||| ||||||||    
T  9559111 caccatcattaattatattttatttttttcaagattttatgtgtctttatctctccaaatggaagaaatcgagaaaca 9559188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 41 - 219
Target Start/End: Original strand, 45260384 - 45260562
Alignment:
Q  41 ggtgaagatcctctccatttggcaaaataaatggagttttgtaagttggagagagatagacacaaaaaatagatggtaggtcctaccactaaatgggttc 140  Q
    |||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| || | |||||||||||| ||| | |    
T  45260384 ggtgaagatcctctccatttggcaaaataaattgagttttgcaagttggagagagatagacacaaaaaatagattgtggatcctaccactaagtggatcc 45260483  T
Q  141 caccatcattaattatattttactttttccaagattttatgtgtctttatctccccaaattgaagaaatggagaaacac 219  Q
    || |||||||||||||||||||||||||  ||||||||||||||||||||||| |||||||||||||||||||||||||    
T  45260484 catcatcattaattatattttactttttttaagattttatgtgtctttatctctccaaattgaagaaatggagaaacac 45260562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 43 - 219
Target Start/End: Original strand, 47226035 - 47226208
Alignment:
Q  43 tgaagatcctctccatttggcaaaataaatggagttttgtaagttggagagagatagacacaaaaaatagatggtaggtcctaccactaaatgggttcca 142  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||  ||||| ||||| |||||||||||||| |||    
T  47226035 tgaagatcctctccatttggcaaaataaatggagttttgcaagttggagagagataaacacaaaaaat--atggtgggtcccaccactaaatgggtccca 47226132  T
Q  143 ccatcattaattatattttactttttccaagattttatgtgtctttatctccccaaattgaagaaatggagaaacac 219  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||| |||||||||    
T  47226133 ccatcattaattatattttactttttccaagattttatgtgt-tttatctctccaaattgaagaaatagagaaacac 47226208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 41 - 219
Target Start/End: Complemental strand, 16366636 - 16366458
Alignment:
Q  41 ggtgaagatcctctccatttggcaaaataaatggagttttgtaagttggagagagatagacacaaaaaatagatggtaggtcctaccactaaatgggttc 140  Q
    ||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||| || ||||||||||| | |||||||||||| || || |    
T  16366636 ggtgaagatcctctccatttgacaaaataaatggagttttgcaagttggagagagatagacataagaaatagatggtggatcctaccactaagtgtgtcc 16366537  T
Q  141 caccatcattaattatattttactttttccaagattttatgtgtctttatctccccaaattgaagaaatggagaaacac 219  Q
    |||||||||||||||||||||||||||| |||||||||| |||| |||||||| |||||||||||||||||||||||||    
T  16366536 caccatcattaattatattttacttttttcaagattttacgtgtttttatctctccaaattgaagaaatggagaaacac 16366458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 41 - 219
Target Start/End: Complemental strand, 4888585 - 4888407
Alignment:
Q  41 ggtgaagatcctctccatttggcaaaataaatggagttttgtaagttggagagagatagacacaaaaaatagatggtaggtcctaccactaaatgggttc 140  Q
    ||||||||||||||||||||| |||||||||||||| |||| |||||||||||||||||||||||||||||||| || |||||||||||||| | ||| |    
T  4888585 ggtgaagatcctctccatttgacaaaataaatggagatttgcaagttggagagagatagacacaaaaaatagatagtgggtcctaccactaagtaggtcc 4888486  T
Q  141 caccatcattaattatattttactttttccaagattttatgtgtctttatctccccaaattgaagaaatggagaaacac 219  Q
    ||||||||||||||||||||||  ||||  ||||||||||||||||||||||| |||||| |||||||| |||||||||    
T  4888485 caccatcattaattatattttatgttttttaagattttatgtgtctttatctctccaaatggaagaaattgagaaacac 4888407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 41 - 219
Target Start/End: Complemental strand, 12139445 - 12139268
Alignment:
Q  41 ggtgaagatcctctccatttggcaaaataaatggagttttgtaagttggagagagatagacacaaaaaatagatggtaggtcctaccactaaat-gggtt 139  Q
    ||||||||| |||| |||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||| |||||||||| ||| | ||||     
T  12139445 ggtgaagattctcttcatttggcaaaataaatgaagttttgcaagttggagagagatagacacaaaaaatagatggtgggtcctaccattaagtggggtc 12139346  T
Q  140 ccaccatcattaattatattttactttttccaagattttatgtgtctttatctccccaaattgaagaaatggagaaacac 219  Q
    |||||||||||||||||||||||||||||  |||||||||||||  |||||||| |||||||||||||||||||||||||    
T  12139345 ccaccatcattaattatattttactttttttaagattttatgtg--tttatctctccaaattgaagaaatggagaaacac 12139268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 41 - 219
Target Start/End: Complemental strand, 44648082 - 44647905
Alignment:
Q  41 ggtgaagatcctctccatttggcaaaataaatggagttttgtaagttggagagagatagacacaaaaaatagatggtaggtcctaccactaaatggg--t 138  Q
    ||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| | ||| |||||||| ||||  |    
T  44648082 ggtgaagatcctctccatttgacaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtggatccgaccactaagtgggtct 44647983  T
Q  139 tccaccatcattaattatattttactttttccaagattttatgtgtctttatctccccaaattgaagaaatggagaaacac 219  Q
     || ||||||||||||||||||||| |||| |||||||||||||||||||||||   ||||||||||||||||||||||||    
T  44647982 ccctccatcattaattatattttacatttttcaagattttatgtgtctttatct---caaattgaagaaatggagaaacac 44647905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 41 - 219
Target Start/End: Complemental strand, 18198374 - 18198196
Alignment:
Q  41 ggtgaagatcctctccatttggcaaaataaatggagttttgtaagttggagagagatagacacaaaaaatagatggtaggtcctaccactaaatgggttc 140  Q
    ||||||||||||||||||||||||||||||||||||||||| || ||||||| | |||||||||||||||||||||| ||| || ||||||| || || |    
T  18198374 ggtgaagatcctctccatttggcaaaataaatggagttttgcaaattggagataaatagacacaaaaaatagatggtgggttctgccactaagtgagtcc 18198275  T
Q  141 caccatcattaattatattttactttttccaagattttatgtgtctttatctccccaaattgaagaaatggagaaacac 219  Q
    |||||||||||||||||||||| ||||| ||||||||||||||  ||||||||  ||||||||||||||||||||||||    
T  18198274 caccatcattaattatattttatttttttcaagattttatgtgattttatctctacaaattgaagaaatggagaaacac 18198196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 48 - 219
Target Start/End: Original strand, 25084690 - 25084863
Alignment:
Q  48 atcctctccatttggcaaaataaa--tggagttttgtaagttggagagagatagacacaaaaaatagatggtaggtcctaccactaaatgggttccacca 145  Q
    ||||||||||||||| |||| |||  |  ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| ||||||    
T  25084690 atcctctccatttggaaaaaaaaaaataaagttttgtaagttggagagagatagacacaaaaaatagatggtgggtcctaccactaagtgggtcccacca 25084789  T
Q  146 tcattaattatattttactttttccaagattttatgtgtctttatctccccaaattgaagaaatggagaaacac 219  Q
    ||||||||||||||||| ||||| ||| ||||||||||||||||||||  |||||| || ||||||||||||||    
T  25084790 tcattaattatattttatttttttcaaaattttatgtgtctttatctcttcaaattaaaaaaatggagaaacac 25084863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 45 - 215
Target Start/End: Complemental strand, 33450621 - 33450450
Alignment:
Q  45 aagatcctctccatttggcaaaataaatggagttttgtaagttggagagagatagacacaaaa-aatagatggtaggtcctaccactaaatgggttccac 143  Q
    |||||||||||||||||  ||||||||| |||||||| || |||||||||||||||||||||| |||||||||| ||||| |||||||| ||||| |||     
T  33450621 aagatcctctccatttgctaaaataaattgagttttgcaatttggagagagatagacacaaaagaatagatggtgggtccaaccactaagtgggtcccat 33450522  T
Q  144 catcattaattatattttactttttccaagattttatgtgtctttatctccccaaattgaagaaatggagaa 215  Q
    ||||||||||||| ||||| ||||| ||| ||||| ||||| | |||||| |||||| | ||||||||||||    
T  33450521 catcattaattattttttatttttttcaaaattttgtgtgtttatatctctccaaatggtagaaatggagaa 33450450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 45 - 215
Target Start/End: Original strand, 47500243 - 47500414
Alignment:
Q  45 aagatcctctccatttggcaaaataaatggagttttgtaagttggagagagatagacacaaaa-aatagatggtaggtcctaccactaaatgggttccac 143  Q
    ||||||||||||||||   ||||||||| ||||||||||| |||||||||||||||||||||| |||||||||| ||||| |||||||| ||||| |||     
T  47500243 aagatcctctccatttactaaaataaattgagttttgtaatttggagagagatagacacaaaagaatagatggtgggtccaaccactaagtgggtcccat 47500342  T
Q  144 catcattaattatattttactttttccaagattttatgtgtctttatctccccaaattgaagaaatggagaa 215  Q
    ||||||||||||| ||||| ||||| ||| ||||| ||||||| |||||| | |||| | ||||||||||||    
T  47500343 catcattaattattttttatttttttcaaaattttgtgtgtctatatctctctaaatggtagaaatggagaa 47500414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 45 - 184
Target Start/End: Original strand, 39855775 - 39855913
Alignment:
Q  45 aagatcctctccatttggcaaaataaatggagttttgtaagttggagagagatagacacaaaaaatagatggtaggtcctaccactaaatgggttccacc 144  Q
    ||||| |||| |||||| |||| |||||||||||| |||| ||||||||||||||||||| |||| ||||||| |||||||||||||| ||||| ||| |    
T  39855775 aagattctcttcatttgacaaattaaatggagttt-gtaatttggagagagatagacacataaaaaagatggtcggtcctaccactaagtgggtcccatc 39855873  T
Q  145 atcattaattatattttactttttccaagattttatgtgt 184  Q
    ||||||||||| |||||||||||| |||||||||| ||||    
T  39855874 atcattaattaaattttacttttttcaagattttaagtgt 39855913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 48 - 216
Target Start/End: Complemental strand, 29631156 - 29630991
Alignment:
Q  48 atcctctccatttggcaaaataaatggagttttgtaagttggagagagatagacacaaaaaatagatggtaggtcctaccactaaatgggttccaccatc 147  Q
    ||||||||||||||| ||||||||||||| |||| || |||   |||||||||||||||| |||||| || ||||| |||||||  | ||| |||| |||    
T  29631156 atcctctccatttggtaaaataaatggag-tttgcaatttg--aagagatagacacaaaacatagatagtgggtccaaccactatgtaggtcccactatc 29631060  T
Q  148 attaattatattttactttttccaagattttatgtgtctttatctccccaaattgaagaaatggagaaa 216  Q
    |||||||||  |||||||||| ||| ||||||||||||||||| || ||||||  ||||||||||||||    
T  29631059 attaattattctttacttttttcaaaattttatgtgtctttatatctccaaatgaaagaaatggagaaa 29630991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 48 - 216
Target Start/End: Original strand, 34985909 - 34986077
Alignment:
Q  48 atcctctccatttggcaaaataaatggagttttgtaagttggagagagatagacacaaaa-aatagatggtaggtcctaccactaaatgggttccaccat 146  Q
    |||||||| |||||  ||||||||| |||||||| || |||||||||||||||||||||| |||||||||| ||||  ||||||||||| || ||| |||    
T  34985909 atcctctcaatttgctaaaataaattgagttttgcaatttggagagagatagacacaaaagaatagatggtgggtcaaaccactaaatgagtcccatcat 34986008  T
Q  147 cattaattatatttta-ctttttccaagattttatgtgtctttatctccccaaattgaagaaatggagaaa 216  Q
    |||||||||| |||||  ||||| ||| ||||||  ||||| |||||| |||||| | |||||||||||||    
T  34986009 cattaattattttttattttttttcaaaatttta--tgtctatatctctccaaatggtagaaatggagaaa 34986077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 48 - 156
Target Start/End: Complemental strand, 989239 - 989132
Alignment:
Q  48 atcctctccatttggcaaaataaatggagttttgtaagttggagagagatagacacaaaaaatagatggtaggtcctaccactaaatgggttccaccatc 147  Q
    |||||||||||||| |||| |||||||||||| | || |||||||||||||||||||||||||| || || |||||||||||||| | ||| | |||||     
T  989239 atcctctccatttgacaaattaaatggagttt-gcaatttggagagagatagacacaaaaaatatatagtgggtcctaccactaagtaggtccaaccata 989141  T
Q  148 attaattat 156  Q
    |||||||||    
T  989140 attaattat 989132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 90 - 215
Target Start/End: Complemental strand, 32916025 - 32915903
Alignment:
Q  90 agagagatagacacaaaaaatagatggtaggtcctaccactaaatgggttccaccatcattaattatattttactttttccaagattttatgtgtcttta 189  Q
    |||||||||||||||||||||| || || |||||||||| ||| || || |||||||||| ||||||||||   |||||  ||  |||| ||||||||||    
T  32916025 agagagatagacacaaaaaataaatagtgggtcctaccattaagtgagtcccaccatcatgaattatattt---ttttttaaaacttttttgtgtcttta 32915929  T
Q  190 tctccccaaattgaagaaatggagaa 215  Q
    |||| |||||| ||||||||||||||    
T  32915928 tctctccaaatggaagaaatggagaa 32915903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 43 - 117
Target Start/End: Original strand, 47271107 - 47271180
Alignment:
Q  43 tgaagatcctctccatttggcaaaataaatggagttttgtaagttggagagagatagacacaaaaaatagatggt 117  Q
    |||||||||||||||||| ||||||||||||||| |||| || ||||||||||||||||||||||||| ||||||    
T  47271107 tgaagatcctctccatttagcaaaataaatggag-tttgcaatttggagagagatagacacaaaaaattgatggt 47271180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 86 - 168
Target Start/End: Original strand, 47799902 - 47799984
Alignment:
Q  86 ttggagagagatagacacaaaaaatagatggtaggtcctaccactaaatgggttccaccatcattaattatattttacttttt 168  Q
    ||||||||||||||||||||||||||  || | ||||||| |||||| ||||| ||||||||||||||||| |||||||||||    
T  47799902 ttggagagagatagacacaaaaaataagtgatgggtcctatcactaagtgggtcccaccatcattaattattttttacttttt 47799984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 52 - 214
Target Start/End: Original strand, 33608845 - 33609007
Alignment:
Q  52 tctccatttggcaaaataaatggagttttgtaagttggagagagatagacac-aaaaaatagatggtaggtcctaccactaaatgggttccaccatcatt 150  Q
    ||||||||||| ||||||||||||| |||| || ||||||||||||| |||| ||||||||||||| || | |||| || |  || ||||||||||||||    
T  33608845 tctccatttggtaaaataaatggag-tttgcaatttggagagagataaacacaaaaaaatagatggaagatactactaccaggtgagttccaccatcatt 33608943  T
Q  151 aattatattttactttttccaagattttatgtgtctttatctccccaaattgaagaaatggaga 214  Q
    |||||| || ||||||||  || |   | ||| |||||||||  |||||| |||||||||||||    
T  33608944 aattattttatacttttttaaaaaaaatttgtatctttatctttccaaatggaagaaatggaga 33609007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 92 - 168
Target Start/End: Original strand, 19889042 - 19889118
Alignment:
Q  92 agagatagacacaaaaaatagatggtaggtcctaccactaaatgggttccaccatcattaattatattttacttttt 168  Q
    ||||||||| ||||||||||  | || ||||||| |||||| ||||||||||||||||||||||| |||||||||||    
T  19889042 agagatagatacaaaaaataagttgtgggtcctatcactaagtgggttccaccatcattaattattttttacttttt 19889118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 92 - 168
Target Start/End: Complemental strand, 30588602 - 30588526
Alignment:
Q  92 agagatagacacaaaaaatagatggtaggtcctaccactaaatgggttccaccatcattaattatattttacttttt 168  Q
    ||||||||||||||||||||  ||   ||||||| |||||| ||||| ||||||||||||||||| |||||||||||    
T  30588602 agagatagacacaaaaaataagtgacgggtcctatcactaagtgggtcccaccatcattaattattttttacttttt 30588526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 89 - 156
Target Start/End: Original strand, 46802336 - 46802403
Alignment:
Q  89 gagagagatagacacaaaaaatagatggtaggtcctaccactaaatgggttccaccatcattaattat 156  Q
    |||||||||||||| |||||||||| ||| |||||||||||||| ||||| |||||| | ||||||||    
T  46802336 gagagagatagacataaaaaatagacggtgggtcctaccactaagtgggtcccaccaccgttaattat 46802403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 128 - 214
Target Start/End: Complemental strand, 40019712 - 40019626
Alignment:
Q  128 actaaatgggttccaccatcattaattatattttactttttccaagattttatgtgtctttatctccccaaattgaagaaatggaga 214  Q
    |||||||| || ||||||||||||||||  || |||||||| ||||||||| ||||| |||||||| |||||| || ||||| ||||    
T  40019712 actaaatgagtcccaccatcattaattactttatacttttttcaagattttttgtgtttttatctctccaaatggaggaaattgaga 40019626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 92 - 168
Target Start/End: Complemental strand, 32916236 - 32916160
Alignment:
Q  92 agagatagacacaaaaaatagatggtaggtcctaccactaaatgggttccaccatcattaattatattttacttttt 168  Q
    ||||||| |||| |||||||| | || |||| ||||||||| ||| ||||||||||||||||||| ||||| |||||    
T  32916236 agagatacacacgaaaaataggttgtgggtcataccactaagtggattccaccatcattaattattttttatttttt 32916160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 126 - 193
Target Start/End: Original strand, 35265211 - 35265279
Alignment:
Q  126 ccactaaatgggttccaccatcattaattatattttac-tttttccaagattttatgtgtctttatctc 193  Q
    |||||||||||||||||||  |||||||||| || ||| ||||| ||||||||| ||||||||||||||    
T  35265211 ccactaaatgggttccacctgcattaattattttatactttttttcaagattttttgtgtctttatctc 35265279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 86 - 151
Target Start/End: Original strand, 19027685 - 19027751
Alignment:
Q  86 ttggagagagatagacac-aaaaaatagatggtaggtcctaccactaaatgggttccaccatcatta 151  Q
    |||||||||||||||||| |||||||| ||||| ||||||| |||||| ||| | ||||||||||||    
T  19027685 ttggagagagatagacacaaaaaaataaatggtgggtcctatcactaagtggatcccaccatcatta 19027751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 86 - 151
Target Start/End: Complemental strand, 20726951 - 20726885
Alignment:
Q  86 ttggagagagatagacacaaaaaa-tagatggtaggtcctaccactaaatgggttccaccatcatta 151  Q
    |||||||||||||||||||||||| || ||||| ||||||| |||||| ||| | ||||||||||||    
T  20726951 ttggagagagatagacacaaaaaaataaatggtgggtcctatcactaagtggatcccaccatcatta 20726885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 117 - 178
Target Start/End: Complemental strand, 8734562 - 8734502
Alignment:
Q  117 taggtcctaccactaaatgggttccaccatcattaattatattttactttttccaagatttt 178  Q
    ||||||||| |||||||||||| ||||||||||||||||| ||||| ||||| ||| |||||    
T  8734562 taggtcctatcactaaatgggt-ccaccatcattaattattttttatttttttcaaaatttt 8734502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 120 - 167
Target Start/End: Original strand, 11828945 - 11828992
Alignment:
Q  120 gtcctaccactaaatgggttccaccatcattaattatattttactttt 167  Q
    ||||||||| ||| ||||||||||||||||||||||| ||||| ||||    
T  11828945 gtcctaccattaagtgggttccaccatcattaattattttttattttt 11828992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 151
Target Start/End: Original strand, 14696759 - 14696825
Alignment:
Q  86 ttggagagagatagacac-aaaaaatagatggtaggtcctaccactaaatgggttccaccatcatta 151  Q
    |||||||||||||||||| ||||||||  |||| ||||||| |||||| ||| | ||||||||||||    
T  14696759 ttggagagagatagacacaaaaaaataagtggtgggtcctatcactaagtggatcccaccatcatta 14696825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 132
Target Start/End: Complemental strand, 29844364 - 29844318
Alignment:
Q  86 ttggagagagatagacacaaaaaatagatggtaggtcctaccactaa 132  Q
    ||||||||||||||||||| ||||||||| || ||| ||||||||||    
T  29844364 ttggagagagatagacacataaaatagatagtgggttctaccactaa 29844318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 139; Significance: 7e-73; HSPs: 34)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 41 - 219
Target Start/End: Complemental strand, 50484504 - 50484326
Alignment:
Q  41 ggtgaagatcctctccatttggcaaaataaatggagttttgtaagttggagagagatagacacaaaaaatagatggtaggtcctaccactaaatgggttc 140  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||| | |||||||| ||||| |    
T  50484504 ggtgaagatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtgggtacaaccactaagtgggtcc 50484405  T
Q  141 caccatcattaattatattttactttttccaagattttatgtgtctttatctccccaaattgaagaaatggagaaacac 219  Q
    |||| ||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| |||||||||||||||||    
T  50484404 caccgtcattaattatattttacttttttcaagattttatgtgtctttatctctccaaattaaagaaatggagaaacac 50484326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 41 - 219
Target Start/End: Complemental strand, 12151885 - 12151707
Alignment:
Q  41 ggtgaagatcctctccatttggcaaaataaatggagttttgtaagttggagagagatagacacaaaaaatagatggtaggtcctaccactaaatgggttc 140  Q
    |||||||||| ||||||||||||||||||||||||||||||  ||||||||||||| ||||||||||||||||| || |||||||||||||| ||||| |    
T  12151885 ggtgaagatcttctccatttggcaaaataaatggagttttgccagttggagagagaaagacacaaaaaatagattgtgggtcctaccactaagtgggtcc 12151786  T
Q  141 caccatcattaattatattttactttttccaagattttatgtgtctttatctccccaaattgaagaaatggagaaacac 219  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||| ||||||||||||||    
T  12151785 caccatcattaattatattttacttttttcaagattttatgtgtctttatctctccaaattgaataaatggagaaacac 12151707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 41 - 219
Target Start/End: Original strand, 50294020 - 50294198
Alignment:
Q  41 ggtgaagatcctctccatttggcaaaataaatggagttttgtaagttggagagagatagacacaaaaaatagatggtaggtcctaccactaaatgggttc 140  Q
    |||||||||||||| ||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||| |||||||||||||| ||| | |    
T  50294020 ggtgaagatcctcttcatttggcaaaataaatggagatttgcaagttggagagagatagacacaaaaaatagatggtgggtcctaccactaagtggatcc 50294119  T
Q  141 caccatcattaattatattttactttttccaagattttatgtgtctttatctccccaaattgaagaaatggagaaacac 219  Q
     ||||||||||||||||||||| ||||| |||||||||||||||||||||||| |||||| |||||||| |||||||||    
T  50294120 taccatcattaattatattttatttttttcaagattttatgtgtctttatctctccaaatggaagaaattgagaaacac 50294198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 44 - 219
Target Start/End: Complemental strand, 40328390 - 40328216
Alignment:
Q  44 gaagatcctctccatttggcaaaataaatggagttttgtaagttggagagagatagacacaaaaaatagatggtaggtcctaccactaaatgggttccac 143  Q
    |||||||||||||||||||||||||||||||||||||| || |||||||||  |||||||||||| |||||||| ||||| |||||||| ||||||||||    
T  40328390 gaagatcctctccatttggcaaaataaatggagttttgcaaattggagaga--tagacacaaaaa-tagatggtgggtcccaccactaagtgggttccac 40328294  T
Q  144 catcattaattatattttact-ttttccaagattttatgtgtc-tttatctccccaaattgaagaaatggagaaacac 219  Q
    |||||||| |||||||||||| |||| |||||||||||||||| |||||||| ||||||| |||||||| ||||||||    
T  40328293 catcattagttatattttactttttttcaagattttatgtgtcttttatctctccaaattaaagaaatgaagaaacac 40328216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 41 - 219
Target Start/End: Original strand, 23861909 - 23862091
Alignment:
Q  41 ggtgaagatcctctccatttggcaaaataaatggagttttgtaagttggagagagatagacacaaaaaatagatggtagg---tcctaccactaaatggg 137  Q
    |||||| |||||||| |||| |||||||||||| ||||||| ||||||||||||||||||||||||||||||||||| |    |||||||||||| |||     
T  23861909 ggtgaatatcctctctatttagcaaaataaatgaagttttgcaagttggagagagatagacacaaaaaatagatggtggtgaatcctaccactaagtgga 23862008  T
Q  138 ttccaccatcattaattatattttactttttc-caagattttatgtgtctttatctccccaaattgaagaaatggagaaacac 219  Q
    | ||||||||||||||||||||||| |||||  |||||||||||||||||||||||  ||||||||||||||| |||||||||    
T  23862009 tcccaccatcattaattatattttattttttttcaagattttatgtgtctttatctttccaaattgaagaaatagagaaacac 23862091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 41 - 219
Target Start/End: Original strand, 48327111 - 48327289
Alignment:
Q  41 ggtgaagatcctctccatttggcaaaataaatggagttttgtaagttggagagagatagacacaaaaaatagatggtaggtcctaccactaaatgggttc 140  Q
    |||||||||| ||||||||||||||||||||||||| |||| |||||||||||||||||||| ||||||||||||||  ||||||||||||| |||| ||    
T  48327111 ggtgaagatcatctccatttggcaaaataaatggagatttgcaagttggagagagatagacaaaaaaaatagatggtgagtcctaccactaagtggg-tc 48327209  T
Q  141 caccatcattaattatatttta-ctttttccaagattttatgtgtctttatctccccaaattgaagaaatggagaaacac 219  Q
    ||||||||||||||||||||||  ||||| |||||||||||||  |||||| || |||||| |||||||| || ||||||    
T  48327210 caccatcattaattatattttattttttttcaagattttatgtacctttatatctccaaatggaagaaattgataaacac 48327289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 98 - 219
Target Start/End: Original strand, 12380924 - 12381045
Alignment:
Q  98 agacacaaaaaatagatggtaggtcctaccactaaatgggttccaccatcattaattatattttactttttccaagattttatgtgtctttatctcccca 197  Q
    |||||||||||||||||||| ||| |||||||||| || || ||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||    
T  12380924 agacacaaaaaatagatggtgggttctaccactaagtgagtcccaccatcattaattatattttacttttttcaagattttatgtgtctttatctctcca 12381023  T
Q  198 aattgaagaaatggagaaacac 219  Q
    ||||||||||||||||||||||    
T  12381024 aattgaagaaatggagaaacac 12381045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 98 - 219
Target Start/End: Original strand, 12384991 - 12385112
Alignment:
Q  98 agacacaaaaaatagatggtaggtcctaccactaaatgggttccaccatcattaattatattttactttttccaagattttatgtgtctttatctcccca 197  Q
    |||||||||||||||||||| ||| |||||||||| || || ||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||    
T  12384991 agacacaaaaaatagatggtgggttctaccactaagtgagtcccaccatcattaattatattttacttttttcaagattttatgtgtctttatctctcca 12385090  T
Q  198 aattgaagaaatggagaaacac 219  Q
    ||||||||||||||||||||||    
T  12385091 aattgaagaaatggagaaacac 12385112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 41 - 219
Target Start/End: Complemental strand, 45978123 - 45977962
Alignment:
Q  41 ggtgaagatcctctccatttggcaaaataaatggagttttgtaagttggagagagatagacacaaaaaatagatggtaggtcctaccactaaatgggttc 140  Q
    ||||||||||||||| |||||  |||||||||||||||||| |||||||||||||||||| |||||||||||||||| |||||                     
T  45978123 ggtgaagatcctctctatttgataaaataaatggagttttgcaagttggagagagatagatacaaaaaatagatggtgggtcc----------------- 45978041  T
Q  141 caccatcattaattatattttactttttccaagattttatgtgtctttatctccccaaattgaagaaatggagaaacac 219  Q
    || |||| |||||||||||||| ||||| |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  45978040 cagcatcgttaattatattttatttttttcaagattttatgtgtctttatctctccaaattgaagaaatggagaaacac 45977962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 41 - 114
Target Start/End: Original strand, 12380834 - 12380907
Alignment:
Q  41 ggtgaagatcctctccatttggcaaaataaatggagttttgtaagttggagagagatagacacaaaaaatagat 114  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  12380834 ggtgaagatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagat 12380907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 41 - 114
Target Start/End: Original strand, 12384901 - 12384974
Alignment:
Q  41 ggtgaagatcctctccatttggcaaaataaatggagttttgtaagttggagagagatagacacaaaaaatagat 114  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  12384901 ggtgaagatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagat 12384974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 140 - 218
Target Start/End: Original strand, 7841766 - 7841844
Alignment:
Q  140 ccaccatcattaattatattttactttttccaagattttatgtgtctttatctccccaaattgaagaaatggagaaaca 218  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||| |||||    
T  7841766 ccaccatcattaattatattttacttttttcaagattttatgtgtctttatctctccaaattgaagaaatggaaaaaca 7841844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 41 - 128
Target Start/End: Original strand, 7840636 - 7840723
Alignment:
Q  41 ggtgaagatcctctccatttggcaaaataaatggagttttgtaagttggagagagatagacacaaaaaatagatggtaggtcctacca 128  Q
    |||||||||||| | ||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||| | ||||||||||    
T  7840636 ggtgaagatcctattcatttggcagaataaatggagttttgtaagttggagagagatagacacaagaaatagatgatgggtcctacca 7840723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 89 - 212
Target Start/End: Complemental strand, 24977310 - 24977187
Alignment:
Q  89 gagagagatagacacaaaaaatagatggtaggtcctaccactaaatgggttccaccatcattaattatatttta-ctttttccaagattttatgtgtctt 187  Q
    ||||||||||||||||||||||||||||| | |||||||||||| |||||||||| ||||||| ||||||||||  ||||| ||||||||||| ||| ||    
T  24977310 gagagagatagacacaaaaaatagatggtggatcctaccactaagtgggttccacaatcattagttatattttattttttttcaagattttat-tgtatt 24977212  T
Q  188 tatctccccaaattgaagaaatgga 212  Q
    |||||| | ||||  ||||||||||    
T  24977211 tatctctctaaatgtaagaaatgga 24977187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 41 - 154
Target Start/End: Original strand, 32361264 - 32361377
Alignment:
Q  41 ggtgaagatcctctccatttggcaaaataaatggagttttgtaagttggagagagatagacacaaaaaatagatggtaggtcctaccactaaatgggttc 140  Q
    |||||| |||||||||||||||  |||||| | |||||||||||||||||||||||| ||||||||| ||||||||| | |||||| ||||| | ||| |    
T  32361264 ggtgaaaatcctctccatttggtgaaataattagagttttgtaagttggagagagatggacacaaaagatagatggtggatcctactactaagtaggtcc 32361363  T
Q  141 caccatcattaatt 154  Q
    || |||||||||||    
T  32361364 catcatcattaatt 32361377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 45 - 215
Target Start/End: Original strand, 18976265 - 18976433
Alignment:
Q  45 aagatcctctccatttggcaaaataaatggagttttgtaagttggagagagatagacacaaaa-aatagatggtaggtcctaccactaaatgggttccac 143  Q
    |||||||||||||||||  ||||||||| |||||||| || |||||||||||||||||||||| |||||||||| | ||| |||| ||| | ||| |||     
T  18976265 aagatcctctccatttgctaaaataaattgagttttgcaatttggagagagatagacacaaaagaatagatggtggatccaaccattaagtaggtcccat 18976364  T
Q  144 catcattaattatattttactttttccaagattttatgtgtctttatctccccaaattgaagaaatggagaa 215  Q
    ||||||||||||| ||||| ||||| ||| ||||  ||||| | |||||| |||||| | ||||||| ||||    
T  18976365 catcattaattat-ttttatttttttcaaaattt--tgtgtttatatctctccaaatggtagaaatgaagaa 18976433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 86 - 174
Target Start/End: Complemental strand, 39426283 - 39426195
Alignment:
Q  86 ttggagagagatagacacaaaaaatagatggtaggtcctaccactaaatgggttccaccatcattaattatattttactttttccaaga 174  Q
    ||||||||||||||||||| ||||||||| || |||||||||||||| ||||| |||| |||||||||||| |||||||||||| ||||    
T  39426283 ttggagagagatagacacataaaatagatagtgggtcctaccactaattgggtcccactatcattaattattttttactttttctaaga 39426195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 90 - 168
Target Start/End: Original strand, 26860056 - 26860134
Alignment:
Q  90 agagagatagacacaaaaaatagatggtaggtcctaccactaaatgggttccaccatcattaattatattttacttttt 168  Q
    ||||||||||||||| ||||||||| |||||||||| |||||| ||| | |||| |||||||||||| |||||||||||    
T  26860056 agagagatagacacataaaatagatagtaggtcctatcactaagtggatcccacaatcattaattattttttacttttt 26860134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 86 - 168
Target Start/End: Original strand, 52280041 - 52280123
Alignment:
Q  86 ttggagagagatagacacaaaaaatagatggtaggtcctaccactaaatgggttccaccatcattaattatattttacttttt 168  Q
    ||||||||||||||||| ||||||||  |||| ||||||| |||||| ||| | ||||||||||||||||| |||||||||||    
T  52280041 ttggagagagatagacataaaaaataagtggtgggtcctatcactaagtggatcccaccatcattaattattttttacttttt 52280123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 93 - 156
Target Start/End: Original strand, 24413291 - 24413354
Alignment:
Q  93 gagatagacacaaaaaatagatggtaggtcctaccactaaatgggttccaccatcattaattat 156  Q
    |||||||||||||||||| |||||| ||||||| || ||||||||| |||||||||||||||||    
T  24413291 gagatagacacaaaaaatggatggtgggtcctatcattaaatgggtcccaccatcattaattat 24413354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 119 - 213
Target Start/End: Original strand, 46608412 - 46608504
Alignment:
Q  119 ggtcctaccactaaatgggttccaccatcattaattatattttactttttccaagattttatgtgtctttatctccccaaattgaagaaatggag 213  Q
    |||||||||||||| ||||  ||||||||||||||||| ||||||||||| ||| | ||  ||||||||||| || |||||| ||||||||||||    
T  46608412 ggtcctaccactaagtgggacccaccatcattaattattttttacttttttcaaaactt--tgtgtctttatttctccaaatggaagaaatggag 46608504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 86 - 168
Target Start/End: Original strand, 30077646 - 30077728
Alignment:
Q  86 ttggagagagatagacacaaaaaatagatggtaggtcctaccactaaatgggttccaccatcattaattatattttacttttt 168  Q
    ||||||||||||||||||||||||||  |||| ||| ||| |||||| || || |||| |||||||||||| |||||||||||    
T  30077646 ttggagagagatagacacaaaaaataagtggtgggttctatcactaagtgagtcccactatcattaattattttttacttttt 30077728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 140 - 216
Target Start/End: Complemental strand, 2845285 - 2845208
Alignment:
Q  140 ccaccatcattaattatattttactttttccaagattttatgtgtctttatctccccaaattga-agaaatggagaaa 216  Q
    ||||||||||||||||||||||||| ||| ||| ||||| ||||| |||||||| ||||||||| |||||| ||||||    
T  2845285 ccaccatcattaattatattttactattttcaaaattttgtgtgtatttatctctccaaattgatagaaatagagaaa 2845208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 89 - 214
Target Start/End: Original strand, 32887785 - 32887910
Alignment:
Q  89 gagagagatagacacaaaaaatagatggtaggtcctaccactaaatgggttccaccatcattaattatattttactttttccaagattttatgtgtcttt 188  Q
    |||| ||||||||||| |||||| || || | |||||||| ||||||||| ||||||||||||||||| ||  | ||||| |||  |||| || |||| |    
T  32887785 gagaaagatagacacataaaataaatagtggatcctaccattaaatgggtcccaccatcattaattattttcaatttttttcaaacttttttgagtctat 32887884  T
Q  189 atctccccaaattgaagaaatggaga 214  Q
    ||||| ||||||  ||||||||||||    
T  32887885 atctctccaaatgaaagaaatggaga 32887910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 90 - 193
Target Start/End: Complemental strand, 26372321 - 26372219
Alignment:
Q  90 agagagatagacacaaaaaatagatggtaggtcctaccactaaatgggttccaccatcattaattatattttactttttccaagattttatgtgtcttta 189  Q
    ||||||||||||||  ||||||||   ||| |||||||| ||| ||||| |||||| |||||||||| ||||||||||||||| ||||| || |||| ||    
T  26372321 agagagatagacacgtaaaatagacaatagatcctaccattaagtgggtcccaccaccattaattattttttactttttccaa-attttttgagtctata 26372223  T
Q  190 tctc 193  Q
    ||||    
T  26372222 tctc 26372219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 151 - 216
Target Start/End: Complemental strand, 40988723 - 40988658
Alignment:
Q  151 aattatattttactttttccaagattttatgtgtctttatctccccaaattgaagaaatggagaaa 216  Q
    |||||| ||||||||||| ||| ||||| |||||||||||||| |||||| ||| |||||||||||    
T  40988723 aattattttttacttttttcaaaattttgtgtgtctttatctctccaaatagaaaaaatggagaaa 40988658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 104 - 215
Target Start/End: Complemental strand, 44483822 - 44483712
Alignment:
Q  104 aaaaaatagatggtaggtcctaccactaaatgggttccaccatcattaattatatttta-ctttttccaagattttatgtgtctttatctccccaaattg 202  Q
    |||||| |||| || |||||||||| ||||||| ||||||||||||||||||| |||||  ||||| ||| |  || ||||||||||||||  |||||      
T  44483822 aaaaaaaagattgtgggtcctaccattaaatggattccaccatcattaattattttttattttttttcaaaa--ttgtgtgtctttatctcttcaaatgc 44483725  T
Q  203 aagaaatggagaa 215  Q
    |||||||||||||    
T  44483724 aagaaatggagaa 44483712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 86 - 214
Target Start/End: Original strand, 5047383 - 5047510
Alignment:
Q  86 ttggagagagatagacacaaaaaatagatggtaggtcctaccactaaatgggttccaccatcattaattatattttactttttccaagattttatgtgtc 185  Q
    |||||||||||| ||  || |||||||||  | | |||||||||||  ||||| ||||||||||||||||| || || ||||| |||  |||| |||| |    
T  5047383 ttggagagagattgatgcataaaatagataatggatcctaccactatgtgggtcccaccatcattaattattttata-ttttttcaaacttttttgtgcc 5047481  T
Q  186 tttatctccccaaattgaagaaatggaga 214  Q
    |||||||| | |||| |||||||||||||    
T  5047482 tttatctctctaaatggaagaaatggaga 5047510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 41 - 109
Target Start/End: Original strand, 30860726 - 30860794
Alignment:
Q  41 ggtgaagatcctctccatttggcaaaataaatggagttttgtaagttggagagagatagacacaaaaaa 109  Q
    |||||||||| ||  ||||| ||||||| |||||||||||| |||||||||||| ||||||| ||||||    
T  30860726 ggtgaagatcttcatcatttagcaaaatgaatggagttttgcaagttggagagatatagacataaaaaa 30860794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 45 - 107
Target Start/End: Original strand, 1228501 - 1228563
Alignment:
Q  45 aagatcctctccatttggcaaaataaatggagttttgtaagttggagagagatagacacaaaa 107  Q
    |||||||||| |||||   |||||||||||||||||| || ||||||||||| ||||||||||    
T  1228501 aagatcctcttcatttactaaaataaatggagttttgcaatttggagagagacagacacaaaa 1228563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 86 - 151
Target Start/End: Original strand, 18107323 - 18107389
Alignment:
Q  86 ttggagagagatagacac-aaaaaatagatggtaggtcctaccactaaatgggttccaccatcatta 151  Q
    |||||||||||||||||| ||||||||  |||| ||||||| |||||||||| | ||||||||||||    
T  18107323 ttggagagagatagacacaaaaaaataagtggtgggtcctatcactaaatggatcccaccatcatta 18107389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 193
Target Start/End: Complemental strand, 45970861 - 45970812
Alignment:
Q  144 catcattaattatattttactttttccaagattttatgtgtctttatctc 193  Q
    ||||||||||||| ||||||||||| ||| ||||| ||||||||||||||    
T  45970861 catcattaattattttttacttttttcaaaattttgtgtgtctttatctc 45970812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 47 - 144
Target Start/End: Complemental strand, 44239306 - 44239210
Alignment:
Q  47 gatcctctccatttggcaaaataaatggagttttgtaagttggagagagatagacacaaaaaatagatggtaggtcctaccactaaatgggttccacc 144  Q
    ||||||||||||||| |||| ||||||||| | | ||| ||||||||| |||||||||| ||| |||  |||  | || ||||||||||||| |||||    
T  44239306 gatcctctccatttgtcaaattaaatggag-tatataatttggagagaaatagacacaagaaaaagagagtaaatgcttccactaaatgggtcccacc 44239210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 86 - 151
Target Start/End: Original strand, 6948832 - 6948899
Alignment:
Q  86 ttggagagagatagacacaaaaaataga--tggtaggtcctaccactaaatgggttccaccatcatta 151  Q
    ||||||||||||||||| |||||||| |  |||| ||||||| |||||| ||| | ||||||||||||    
T  6948832 ttggagagagatagacaaaaaaaatataagtggtgggtcctatcactaagtggatcccaccatcatta 6948899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 135; Significance: 2e-70; HSPs: 30)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 41 - 219
Target Start/End: Complemental strand, 27033769 - 27033591
Alignment:
Q  41 ggtgaagatcctctccatttggcaaaataaatggagttttgtaagttggagagagatagacacaaaaaatagatggtaggtcctaccactaaatgggttc 140  Q
    |||||||||| ||||||||||  |||||||||||||||||| ||||||||||||||||||||||| ||||||||||| |||||||||||||| ||| | |    
T  27033769 ggtgaagatcatctccatttgataaaataaatggagttttgcaagttggagagagatagacacaagaaatagatggtgggtcctaccactaagtggatcc 27033670  T
Q  141 caccatcattaattatattttactttttccaagattttatgtgtctttatctccccaaattgaagaaatggagaaacac 219  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  27033669 caccatcattaattatattttacttttttcaagattttatgtgtctttatctctccaaattgaagaaatggagaaacac 27033591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 41 - 219
Target Start/End: Complemental strand, 2230101 - 2229923
Alignment:
Q  41 ggtgaagatcctctccatttggcaaaataaatggagttttgtaagttggagagagatagacacaaaaaatagatggtaggtcctaccactaaatgggttc 140  Q
    |||||| ||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||| | |||||||||||||| ||| |||    
T  2230101 ggtgaacatcctctccatttggcaaaataattggagttttgcaagttggagagagatagacacaaaaaatagatgatgggtcctaccactaagtggtttc 2230002  T
Q  141 caccatcattaattatattttactttttccaagattttatgtgtctttatctccccaaattgaagaaatggagaaacac 219  Q
    |||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||||| ||||||| |||||||||    
T  2230001 caccatcattaattatattttacttttttcaaaattttatgtgtctttatctctccaaattaaagaaatagagaaacac 2229923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 41 - 219
Target Start/End: Complemental strand, 34373949 - 34373771
Alignment:
Q  41 ggtgaagatcctctccatttggcaaaataaatggagttttgtaagttggagagagatagacacaaaaaatagatggtaggtcctaccactaaatgggttc 140  Q
    ||||||||| |||||||||||||||||||||| | |||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| | ||| |    
T  34373949 ggtgaagattctctccatttggcaaaataaattgtgttttgcaagttggagagagatagacacaaaaaatagatggtgggtcctaccactaattaggtcc 34373850  T
Q  141 caccatcattaattatattttactttttccaagattttatgtgtctttatctccccaaattgaagaaatggagaaacac 219  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||| ||||| ||||||||    
T  34373849 caccatcattaattatattttacttttttcaagattttatgtgtctttatctctccaaattgaaaaaatgaagaaacac 34373771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 41 - 219
Target Start/End: Original strand, 43719904 - 43720082
Alignment:
Q  41 ggtgaagatcctctccatttggcaaaataaatggagttttgtaagttggagagagatagacacaaaaaatagatggtaggtcctaccactaaatgggttc 140  Q
    ||||||||||||||||||||  ||||||||||||||||||| ||||||||||||||||||||||||||||| || || |||||||||||||| ||||| |    
T  43719904 ggtgaagatcctctccatttaacaaaataaatggagttttgcaagttggagagagatagacacaaaaaataaattgtgggtcctaccactaagtgggtcc 43720003  T
Q  141 caccatcattaattatattttactttttccaagattttatgtgtctttatctccccaaattgaagaaatggagaaacac 219  Q
    |||||||||||||||||||||| |||||  ||||||||||||||||||||||| |||||||||||||||||||||||||    
T  43720004 caccatcattaattatattttattttttttaagattttatgtgtctttatctctccaaattgaagaaatggagaaacac 43720082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 128; E-Value: 2e-66
Query Start/End: Original strand, 41 - 219
Target Start/End: Original strand, 19830388 - 19830567
Alignment:
Q  41 ggtgaagatcctctccatttggcaaaataaatggagttttgtaagttggagagagatagacacaaaaaatagatggtaggtcctaccactaaatgggttc 140  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||| |||| |||||||||||||||||||||| |||||||||| ||| ||||| |    
T  19830388 ggtgaagatcctctccatttggcaaaataaatggagttttgcaagttggggagaaatagacacaaaaaatagatggtgggtcctaccattaagtgggtcc 19830487  T
Q  141 caccatcattaattatatttta-ctttttccaagattttatgtgtctttatctccccaaattgaagaaatggagaaacac 219  Q
    |||||||||||||||||||||| ||||||  ||||||||||||||||||||||| |||||||||||||||||| ||||||    
T  19830488 caccatcattaattatattttaccttttttaaagattttatgtgtctttatctctccaaattgaagaaatggaaaaacac 19830567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 43 - 219
Target Start/End: Complemental strand, 46167509 - 46167333
Alignment:
Q  43 tgaagatcctctccatttggcaaaataaatggagttttgtaagttggagagagatagacacaaaaaatagatggtaggtcctaccactaaatgggttcca 142  Q
    |||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| ||| | | |    
T  46167509 tgaacatcctctccatttagcaaaataaatggagttttgtaagttggagagagatagacacaaaaaatatatggtgggtcctaccactaagtggatccta 46167410  T
Q  143 ccatcattaattatattttactttttccaagattttatgtgtctttatctccccaaattgaagaaatggagaaacac 219  Q
    |||| ||||||||||||||||||||| ||||||| ||| |||||||||||| | |||||||||||||||| ||||||    
T  46167409 ccattattaattatattttacttttttcaagattatatttgtctttatctctctaaattgaagaaatggaaaaacac 46167333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 42 - 216
Target Start/End: Complemental strand, 40851891 - 40851716
Alignment:
Q  42 gtgaagatcctctccatttggcaaaataaatggagttttgtaagttggagagagatagacacaaaaaatagatggtaggtcctaccactaaatgggttcc 141  Q
    |||||||||||||| ||||| ||||||||||||||||||| |||||||||| |||||||||||||||||||||||| ||| | |||||||| ||||| |     
T  40851891 gtgaagatcctctcaatttgacaaaataaatggagttttgcaagttggagaaagatagacacaaaaaatagatggtgggttcaaccactaagtgggtcct 40851792  T
Q  142 accatcatt-aattatattttactttttccaagattttatgtgtctttatctccccaaattgaagaaatggagaaa 216  Q
    ||||||||| ||| |||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||    
T  40851791 accatcattaaatcatattttacttttttcaagattttatgtgtctttatctctccaaattgaagaaatggagaaa 40851716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 58 - 219
Target Start/End: Original strand, 34373559 - 34373720
Alignment:
Q  58 tttggcaaaataaatggagttttgtaagttggagagagatagacacaaaaaatagatggtaggtcctaccactaaatgggttccaccatcattaattata 157  Q
    ||||||||||||||| |||||||| |||||  | |||||||||||| ||||||||||||| |||||||||||||| ||||| ||||||||||||||||||    
T  34373559 tttggcaaaataaatagagttttgcaagttccatagagatagacactaaaaatagatggtgggtcctaccactaagtgggtcccaccatcattaattata 34373658  T
Q  158 ttttactttttccaagattttatgtgtctttatctccccaaattgaagaaatggagaaacac 219  Q
    ||||||||||| ||||||||| ||| |||||||||| |||||||||||||||||||||||||    
T  34373659 ttttacttttttcaagattttttgtctctttatctctccaaattgaagaaatggagaaacac 34373720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 45 - 215
Target Start/End: Complemental strand, 48084934 - 48084763
Alignment:
Q  45 aagatcctctccatttggcaaaataaatggagttttgtaagttggagagagatagacacaaaa-aatagatggtaggtcctaccactaaatgggttccac 143  Q
    |||||||||||||||||  ||||||||| |||||||| || |||| ||||||||||||||||| |||||||||| ||||| |||||||| ||||| |||     
T  48084934 aagatcctctccatttgctaaaataaattgagttttgcaatttggggagagatagacacaaaagaatagatggtgggtccaaccactaagtgggtcccat 48084835  T
Q  144 catcattaattatattttactttttccaagattttatgtgtctttatctccccaaattgaagaaatggagaa 215  Q
    ||||||||||||| ||||| ||||| ||| ||||| ||||||| |||||| |||||| | ||||||||||||    
T  48084834 catcattaattattttttatttttttcaaaattttgtgtgtctatatctctccaaatggtagaaatggagaa 48084763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 41 - 143
Target Start/End: Complemental strand, 24754775 - 24754673
Alignment:
Q  41 ggtgaagatcctctccatttggcaaaataaatggagttttgtaagttggagagagatagacacaaaaaatagatggtaggtcctaccactaaatgggttc 140  Q
    ||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||| ||||||||||||| ||||||||||||| ||||| |    
T  24754775 ggtgaagatcctctccatttggcaaaataaatggagttttacaagttggagagagatagacacacaaaatagatggtatgtcctaccactaagtgggtcc 24754676  T
Q  141 cac 143  Q
    |||    
T  24754675 cac 24754673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 41 - 143
Target Start/End: Complemental strand, 24763772 - 24763670
Alignment:
Q  41 ggtgaagatcctctccatttggcaaaataaatggagttttgtaagttggagagagatagacacaaaaaatagatggtaggtcctaccactaaatgggttc 140  Q
    ||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||| ||||||||||||| ||||||||||||| ||||| |    
T  24763772 ggtgaagatcctctccatttggcaaaataaatggagttttacaagttggagagagatagacacacaaaatagatggtatgtcctaccactaagtgggtcc 24763673  T
Q  141 cac 143  Q
    |||    
T  24763672 cac 24763670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 57 - 216
Target Start/End: Original strand, 550790 - 550948
Alignment:
Q  57 atttggcaaaataaatggagttttgtaagttggagagagatagacacaaaaaatagatggtaggtcctaccactaaatgggttccaccatcattaattat 156  Q
    ||||||||||||||||||||||| | || ||||||| ||||| | |||||||||||||||| | ||||| || ||| ||||| ||||||| |||| ||||    
T  550790 atttggcaaaataaatggagttt-gcaatttggagaaagatatatacaaaaaatagatggtggatcctatcattaagtgggtcccaccattattatttat 550888  T
Q  157 attttactttttccaagattttatgtgtctttatctccccaaattgaagaaatggagaaa 216  Q
    ||||||||||||  || ||||||||| |||||||||| |||||| |||||||||||||||    
T  550889 attttacttttttaaaaattttatgtatctttatctctccaaatggaagaaatggagaaa 550948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 64 - 219
Target Start/End: Complemental strand, 12403061 - 12402905
Alignment:
Q  64 aaaataaatggagttttgtaagttggagagagatagacacaaaaaatagatggtaggtcctaccactaaatgggttccaccatcattaattatattttac 163  Q
    ||||||||| |||||||| |||||||||||||||||| | ||||| |||||||| | | |||||||||| || || ||||||| ||||||||||||||||    
T  12403061 aaaataaatagagttttgcaagttggagagagatagatataaaaattagatggtggattctaccactaagtgagtcccaccattattaattatattttac 12402962  T
Q  164 t-ttttccaagattttatgtgtctttatctccccaaattgaagaaatggagaaacac 219  Q
    | ||||  ||||||||||||||||||||||| ||||||| |  ||||| ||||||||    
T  12402961 ttttttttaagattttatgtgtctttatctctccaaattaagaaaatgaagaaacac 12402905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 56 - 209
Target Start/End: Original strand, 566746 - 566898
Alignment:
Q  56 catttggcaaaataaatggagttttgtaagttggagagagatagacacaaaaaa-tagatggtaggtcctaccactaaatgggttccaccatcattaatt 154  Q
    |||||||||||||||||||||||| | || ||||||||||||||| |||||||| || ||||  | ||||| || ||| ||||| ||||| | |||| ||    
T  566746 catttggcaaaataaatggagttt-gcaatttggagagagatagatacaaaaaaatatatggcggatcctatcattaagtgggtcccacctttattattt 566844  T
Q  155 atattttactttttccaagattttatgtgtctttatctccccaaattgaagaaat 209  Q
    ||||||||||||||| |||||||||||| | |||||||| |||||| ||||||||    
T  566845 atattttactttttc-aagattttatgtatttttatctctccaaatggaagaaat 566898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 86 - 168
Target Start/End: Original strand, 49679272 - 49679354
Alignment:
Q  86 ttggagagagatagacacaaaaaatagatggtaggtcctaccactaaatgggttccaccatcattaattatattttacttttt 168  Q
    ||||||||||||||||||||||||||  |||  ||||||| |||||||||||| ||||||||||||||||| |||||||||||    
T  49679272 ttggagagagatagacacaaaaaataagtggcgggtcctatcactaaatgggtcccaccatcattaattattttttacttttt 49679354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 86 - 168
Target Start/End: Original strand, 31523670 - 31523752
Alignment:
Q  86 ttggagagagatagacacaaaaaatagatggtaggtcctaccactaaatgggttccaccatcattaattatattttacttttt 168  Q
    ||||||||||||||||||||||||||  |||| |||||||  ||||| ||||| ||||||||||||||||| |||||||||||    
T  31523670 ttggagagagatagacacaaaaaataagtggtgggtcctattactaagtgggtcccaccatcattaattattttttacttttt 31523752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 45 - 214
Target Start/End: Complemental strand, 29586449 - 29586282
Alignment:
Q  45 aagatcctctccatttggcaaaataaatggagttttgtaagttggagagagatagacacaaaaaatagatggtaggtcctaccactaaatgggttccacc 144  Q
    |||||||||| ||||| ||| |||||||||||| | | |  ||||||||||||||||||| ||||||||| ||| ||| ||| | ||| |||||  ||||    
T  29586449 aagatcctcttcatttagcataataaatggagtat-gcagtttggagagagatagacacataaaatagatagtaagtcttactattaagtgggtctcacc 29586351  T
Q  145 atcattaattatattttactttttccaagattttatgtgtctttatctccccaaattgaagaaatggaga 214  Q
    |||||||||||  ||||| |||||| ||  |||| |||||||||||||| | |||| || ||||||||||    
T  29586350 atcattaattactttttagtttttcgaa-tttttttgtgtctttatctctctaaatggatgaaatggaga 29586282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 90 - 168
Target Start/End: Complemental strand, 42613149 - 42613071
Alignment:
Q  90 agagagatagacacaaaaaatagatggtaggtcctaccactaaatgggttccaccatcattaattatattttacttttt 168  Q
    ||||||||||||| ||||||||  |||| ||||||| |||||| ||||| ||||||||||||||||| |||||||||||    
T  42613149 agagagatagacaaaaaaaataagtggtgggtcctatcactaagtgggtcccaccatcattaattattttttacttttt 42613071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 45 - 214
Target Start/End: Complemental strand, 33632935 - 33632768
Alignment:
Q  45 aagatcctctccatttggcaaaataaatggagttttgtaagttggagagagatagacacaaaaaatagatggtaggtcctaccactaaatgggttccacc 144  Q
    |||||| ||||||||||| | |||||||||||  | | || ||||||||||||||||||| ||||||||| || | |||||| | ||||||| ||||| |    
T  33632935 aagatcttctccatttggtataataaatggagcat-gcaatttggagagagatagacacataaaatagatagtggatcctactattaaatggattcca-c 33632838  T
Q  145 atcattaattatattttactttttccaagattttatgtgtctttatctccccaaattgaagaaatggaga 214  Q
    |||||||||||  ||||| |||||| |   |||| ||||| | |||||| |||||| || ||||||||||    
T  33632837 atcattaattactttttagtttttcgatttttttttgtgtttatatctctccaaatggatgaaatggaga 33632768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 41 - 92
Target Start/End: Complemental strand, 24647956 - 24647905
Alignment:
Q  41 ggtgaagatcctctccatttggcaaaataaatggagttttgtaagttggaga 92  Q
    ||||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  24647956 ggtgaagatcctctccatttgacaaaataaatggagttttgcaagttggaga 24647905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 90 - 164
Target Start/End: Complemental strand, 54911723 - 54911649
Alignment:
Q  90 agagagatagacacaaaaaatagatggtaggtcctaccactaaatgggttccaccatcattaattatattttact 164  Q
    ||||||||||| ||| ||||||| | || |||||||||| |||||| |||||||||||||||||||  |||||||    
T  54911723 agagagatagagacataaaataggtagtgggtcctaccattaaatgagttccaccatcattaattaatttttact 54911649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 140 - 216
Target Start/End: Original strand, 52859436 - 52859513
Alignment:
Q  140 ccaccatcattaattatattttact-ttttccaagattttatgtgtctttatctccccaaattgaagaaatggagaaa 216  Q
    |||| |||||||||||||||||||| ||||  |||||||||||||| ||||| || |||||| | |||||||||||||    
T  52859436 ccacaatcattaattatattttactcttttttaagattttatgtgtatttatttctccaaatggtagaaatggagaaa 52859513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 47 - 214
Target Start/End: Original strand, 10474402 - 10474568
Alignment:
Q  47 gatcctctccatttggcaaaataaatggagttttgtaagttggagagagatagacacaaaaaatagatggtaggtcctaccactaaatgggttccaccat 146  Q
    ||||||||| ||||| || ||||||||||| | || || || |||||| ||||||||| |||||||||  | | |||||| | ||| || |||||||||     
T  10474402 gatcctctctatttgacataataaatggag-tatgcaattttgagagatatagacacataaaatagataatggatcctactattaagtgagttccaccaa 10474500  T
Q  147 cattaattatattttactttttccaagattttatgtgtctttatctccccaaattgaagaaatggaga 214  Q
    |||||||||  ||||| |||||  ||  |||| ||||||| |||||| ||||||  | ||||||||||    
T  10474501 cattaattactttttagttttttgaaatttttgtgtgtctatatctctccaaatatatgaaatggaga 10474568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 86 - 168
Target Start/End: Original strand, 40810357 - 40810440
Alignment:
Q  86 ttggagagagatagacacaaaa-aatagatggtaggtcctaccactaaatgggttccaccatcattaattatattttacttttt 168  Q
    ||||||||||||| ||| |||| |||||||||| ||||  |||||||| ||||| ||| ||||||||||||| ||||| |||||    
T  40810357 ttggagagagataaacaaaaaagaatagatggtgggtctaaccactaagtgggtcccatcatcattaattattttttatttttt 40810440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 121 - 167
Target Start/End: Original strand, 34897937 - 34897983
Alignment:
Q  121 tcctaccactaaatgggttccaccatcattaattatattttactttt 167  Q
    |||||||| |||||||||||||| |||||||||||| ||||||||||    
T  34897937 tcctaccattaaatgggttccactatcattaattattttttactttt 34897983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 90 - 215
Target Start/End: Original strand, 25285843 - 25285966
Alignment:
Q  90 agagagatagacacaaaaaatagatggtaggtcctaccactaaatgggttccaccatcattaattatattttactttttccaagattttatgtgtcttta 189  Q
    ||||||||||||||| ||||||||| || | ||||| || |||||| |  |||||||||| |||| | ||| |||||||   ||||||| ||||| ||||    
T  25285843 agagagatagacacataaaatagatagtggatcctatcattaaatgagacccaccatcatcaattttttttgacttttt-ttagatttt-tgtgttttta 25285940  T
Q  190 tctccccaaattgaagaaatggagaa 215  Q
    ||||  ||||| ||||||||||||||    
T  25285941 tctctacaaatggaagaaatggagaa 25285966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 46 - 154
Target Start/End: Original strand, 28229365 - 28229472
Alignment:
Q  46 agatcctctccatttggcaaaataaatggagttttgtaagttggagagagatagacacaaaaaatagatggtaggtcctaccactaaatgggttccacca 145  Q
    |||||||||||||||   |||||||||||||| | | || | ||| ||| ||||||||||||||||| ||||  |||||| || |||||| ||  |||||    
T  28229365 agatcctctccatttattaaaataaatggagtgt-gcaattaggaaagatatagacacaaaaaataggtggtgagtcctatcattaaatgagtctcacca 28229463  T
Q  146 tcattaatt 154  Q
    |||||||||    
T  28229464 tcattaatt 28229472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 90 - 169
Target Start/End: Complemental strand, 1995513 - 1995434
Alignment:
Q  90 agagagatagacacaaaaaatagatggtaggtcctaccactaaatgggttccaccatcattaattatattttactttttc 169  Q
    ||||||||||||| | |||||||||  |  ||||||||| ||| || ||  |||||||||||||||| ||||||||||||    
T  1995513 agagagatagacatagaaaatagataatgagtcctaccaataagtgagtctcaccatcattaattattttttactttttc 1995434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 215
Target Start/End: Complemental strand, 32577526 - 32577476
Alignment:
Q  164 tttttccaagattttatgtgtctttatctccccaaattgaagaaatggagaa 215  Q
    ||||| ||||||||| |||||||||||||| |||||| ||||||||||||||    
T  32577526 ttttttcaagatttt-tgtgtctttatctctccaaatagaagaaatggagaa 32577476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 214
Target Start/End: Original strand, 36354309 - 36354393
Alignment:
Q  130 taaatgggttccaccatcattaattatattttactttttccaagattttatgtgtctttatctccccaaattgaagaaatggaga 214  Q
    |||||| || ||| |||||||||||||  | |||| ||| ||||||||| |||||||||||||  | ||||||| ||||| ||||    
T  36354309 taaatgagtcccatcatcattaattattgtatactattttcaagattttttgtgtctttatctttctaaattgaggaaattgaga 36354393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 123; Significance: 2e-63; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 41 - 219
Target Start/End: Original strand, 16354 - 16532
Alignment:
Q  41 ggtgaagatcctctccatttggcaaaataaatggagttttgtaagttggagagagatagacacaaaaaatagatggtaggtcctaccactaaatgggttc 140  Q
    |||||||||||||||| || ||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| |||||||||||||| ||||| |    
T  16354 ggtgaagatcctctccgttaggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaataaatggtgggtcctaccactaagtgggtcc 16453  T
Q  141 caccatcattaattatattttactttttccaagattttatgtgtctttatctccccaaattgaagaaatggagaaacac 219  Q
    || ||||||||||||||||||| ||||| |||||||||||||   |||||||| |||||||||||||||||||||||||    
T  16454 catcatcattaattatattttatttttttcaagattttatgtaattttatctctccaaattgaagaaatggagaaacac 16532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0250 (Bit Score: 122; Significance: 9e-63; HSPs: 1)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 122; E-Value: 9e-63
Query Start/End: Original strand, 41 - 219
Target Start/End: Complemental strand, 7269 - 7087
Alignment:
Q  41 ggtgaagatcctctccatttggcaaaataaat----ggagttttgtaagttggagagagatagacacaaaaaatagatggtaggtcctaccactaaatgg 136  Q
    ||||||||||||||||||||||||||||||||    ||||||||| ||||||||||||||||||||||||||||||||||| |||||||| | ||| |||    
T  7269 ggtgaagatcctctccatttggcaaaataaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtgggtcctactattaagtgg 7170  T
Q  137 gttccaccatcattaattatattttactttttccaagattttatgtgtctttatctccccaaattgaagaaatggagaaacac 219  Q
    |||||||||||||||||||||||||| ||||| ||||||||||| ||||||||||||  ||||||||||||||| ||||||||    
T  7169 gttccaccatcattaattatattttatttttttcaagattttatatgtctttatctctgcaaattgaagaaatgaagaaacac 7087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 108; Significance: 2e-54; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 45 - 208
Target Start/End: Original strand, 6396 - 6559
Alignment:
Q  45 aagatcctctccatttggcaaaataaatggagttttgtaagttggagagagatagacacaaaaaatagatggtaggtcctaccactaaatgggttccacc 144  Q
    ||||||||||| |||| | |||||||||||  ||||| |||||||| ||||| |||||||||||||||||||| |||||||| ||||||||||| | |||    
T  6396 aagatcctctctatttcgtaaaataaatgggattttgcaagttggaaagagacagacacaaaaaatagatggtgggtcctacaactaaatgggtacaacc 6495  T
Q  145 atcattaattatattttactttttccaagattttatgtgtctttatctccccaaattgaagaaa 208  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||    
T  6496 atcattaattatattttactttttccaagattttatgtgtctttatctctcaaaattgaagaaa 6559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 101; Significance: 3e-50; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 41 - 219
Target Start/End: Original strand, 9158 - 9333
Alignment:
Q  41 ggtgaagatcctctccatttggcaaaataaatggagttttgtaagttggagagagatagacacaaaaaatagatggtaggtcctaccactaaatgggttc 140  Q
    |||||||||| ||||||||||||||||||||||||| |||| |||||||||||||||||||||| |||||||||||| ||||| |||||||| ||| |||    
T  9158 ggtgaagatcatctccatttggcaaaataaatggagatttgcaagttggagagagatagacacagaaaatagatggtgggtccaaccactaagtggattc 9257  T
Q  141 caccatcattaattatattttactttttccaagattttatgtgtctttatctccccaaattgaagaaatggagaaacac 219  Q
    |||||||||||||||||||    |||||  ||||||| ||||| ||||||||| |||||| |||||||| |||||||||    
T  9258 caccatcattaattatatt---atttttttaagatttcatgtgcctttatctctccaaatggaagaaattgagaaacac 9333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126 (Bit Score: 82; Significance: 7e-39; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 45 - 214
Target Start/End: Original strand, 22404 - 22572
Alignment:
Q  45 aagatcctctccatttggcaaaataaatggagttttgtaagttggagagagatagacacaaaaaatagatggtaggtcctaccactaaatgggttccacc 144  Q
    |||||||||| ||||| |||||||||||||||||| | || ||  | ||||||||||||||||||||||| || | |||||||||||| || |||||||     
T  22404 aagatcctctgcatttagcaaaataaatggagttt-gcaatttacaaagagatagacacaaaaaatagatagtggatcctaccactaagtgagttccaca 22502  T
Q  145 atcattaattatattttactttttccaagattttatgtgtctttatctccccaaattgaagaaatggaga 214  Q
    || ||||||||||||||||||||| ||||||||||||||| |||||||| | ||||  ||||||||||||    
T  22503 ataattaattatattttacttttttcaagattttatgtgtatttatctctctaaatgtaagaaatggaga 22572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456 (Bit Score: 79; Significance: 4e-37; HSPs: 1)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 41 - 214
Target Start/End: Complemental strand, 13798 - 13641
Alignment:
Q  41 ggtgaagatcctctccatttggcaaaataaatggagttttgtaagttggagagagatagacacaaaaaa-tagatggtaggtcctaccactaaatgggtt 139  Q
    |||||||||| ||||||||||||||||||||| ||||||||  ||||||||||||||||||| |||||| |||||||| |||||                    
T  13798 ggtgaagatcttctccatttggcaaaataaatagagttttgctagttggagagagatagacaaaaaaaaatagatggtgggtcc---------------- 13715  T
Q  140 ccaccatcattaattatattttactttttccaagattttatgtgtctttatctccccaaattgaagaaatggaga 214  Q
     |||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||    
T  13714 -caccatcattaattatattttacttttttcaagattttatgtgtctttatctctccaaattgaagaaatggaga 13641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 72; Significance: 7e-33; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 44 - 219
Target Start/End: Original strand, 73817 - 73975
Alignment:
Q  44 gaagatcctctccatttggcaaaataaatggagttttgtaagttggagagagatagacacaaaaaatagatggtaggtcctaccactaaatgggttccac 143  Q
    |||||||||||| |||||||||||||||||| |||||| ||||||||||||||||||| ||||| ||||||||| |||||                 ||     
T  73817 gaagatcctctctatttggcaaaataaatggtgttttgcaagttggagagagatagacgcaaaatatagatggtgggtcc-----------------cat 73899  T
Q  144 catcattaattatattttactttttccaagattttatgtgtctttatctccccaaattgaagaaatggagaaacac 219  Q
    ||||||||||||||||||| ||||| ||||||||||||||| |||||||| | |||||||||||||||||||||||    
T  73900 catcattaattatattttatttttttcaagattttatgtgtttttatctctctaaattgaagaaatggagaaacac 73975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 89 - 168
Target Start/End: Original strand, 17311 - 17390
Alignment:
Q  89 gagagagatagacacaaaaaatagatggtaggtcctaccactaaatgggttccaccatcattaattatattttacttttt 168  Q
    |||||||||||||||||||||||  || | ||||||| |||||| ||||| ||||||||||||||||| |||||||||||    
T  17311 gagagagatagacacaaaaaataagtgctgggtcctatcactaagtgggtcccaccatcattaattattttttacttttt 17390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 52 - 155
Target Start/End: Complemental strand, 58786 - 58684
Alignment:
Q  52 tctccatttggcaaaataaatggagttttgtaagttggagagagatagacacaaaaaatagatggtaggtcctaccactaaatgggttccaccatcatta 151  Q
    |||| |||| |||||||||||||| | | | || ||||||||||||| ||| | ||||||||| || | |||||||| ||| ||||||||| ||||||||    
T  58786 tctcgatttagcaaaataaatggaatat-gcaatttggagagagataaacatataaaatagatagtggatcctaccattaagtgggttccatcatcatta 58688  T
Q  152 atta 155  Q
    ||||    
T  58687 atta 58684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 48 - 167
Target Start/End: Complemental strand, 70901 - 70783
Alignment:
Q  48 atcctctccatttggcaaaataaatggagttttgtaagttggagagagatagacacaaaaaatagatggtaggtcctaccactaaatgggttccaccatc 147  Q
    |||||||| |||| | |||||||||||| | | | || ||||| ||||||| ||| | ||||||||| ||   |||||||| ||||||||||||||||||    
T  70901 atcctctctatttagaaaaataaatggaatat-gcaatttggaaagagataaacatataaaatagatagtttatcctaccattaaatgggttccaccatc 70803  T
Q  148 attaattatattttactttt 167  Q
    |||||||   ||||||||||    
T  70802 attaattcctttttactttt 70783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0664 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0664
Description:

Target: scaffold0664; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 151
Target Start/End: Original strand, 4702 - 4768
Alignment:
Q  86 ttggagagagatagacac-aaaaaatagatggtaggtcctaccactaaatgggttccaccatcatta 151  Q
    |||||||||||||||||| ||||||||  |||| ||||||| |||||| ||| | ||||||||||||    
T  4702 ttggagagagatagacacaaaaaaataagtggtgggtcctatcactaagtggatcccaccatcatta 4768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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