View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3151_2D_low_94 (Length: 211)

Name: NF3151_2D_low_94
Description: NF3151_2D
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3151_2D_low_94
NF3151_2D_low_94
[»] chr3 (31 HSPs)
chr3 (90-150)||(37534421-37534481)
chr3 (101-162)||(50960859-50960920)
chr3 (101-160)||(54128375-54128434)
chr3 (40-162)||(45289257-45289380)
chr3 (101-155)||(49503780-49503834)
chr3 (105-162)||(26490310-26490367)
chr3 (105-162)||(42510244-42510301)
chr3 (104-162)||(3987042-3987100)
chr3 (92-162)||(44134047-44134117)
chr3 (101-162)||(39600907-39600968)
chr3 (101-162)||(52138795-52138856)
chr3 (101-162)||(54365203-54365263)
chr3 (105-161)||(27917566-27917622)
chr3 (101-141)||(39235154-39235194)
chr3 (101-145)||(48734361-48734405)
chr3 (101-144)||(21200561-21200604)
chr3 (101-156)||(31337752-31337807)
chr3 (107-162)||(36820193-36820248)
chr3 (101-160)||(38430845-38430904)
chr3 (104-162)||(55244293-55244351)
chr3 (105-162)||(344941-344998)
chr3 (101-150)||(19737004-19737053)
chr3 (101-150)||(19757907-19757956)
chr3 (101-162)||(28245432-28245493)
chr3 (105-162)||(35033141-35033198)
chr3 (101-142)||(36868450-36868491)
chr3 (101-145)||(33272248-33272292)
chr3 (102-162)||(39535667-39535727)
chr3 (104-156)||(41842740-41842792)
chr3 (106-162)||(42026767-42026823)
chr3 (102-162)||(54279015-54279075)
[»] chr2 (20 HSPs)
chr2 (43-161)||(9556538-9556654)
chr2 (98-162)||(11412716-11412780)
chr2 (102-162)||(12141539-12141599)
chr2 (105-161)||(18958903-18958959)
chr2 (105-158)||(41763272-41763325)
chr2 (98-150)||(38860180-38860232)
chr2 (105-162)||(6218962-6219019)
chr2 (102-159)||(12882267-12882324)
chr2 (105-162)||(43752177-43752234)
chr2 (101-141)||(13240971-13241011)
chr2 (101-157)||(43238319-43238375)
chr2 (115-162)||(19337090-19337137)
chr2 (107-150)||(44411719-44411762)
chr2 (104-162)||(11017309-11017367)
chr2 (101-162)||(2610583-2610644)
chr2 (101-162)||(8180775-8180836)
chr2 (101-145)||(14197388-14197433)
chr2 (105-162)||(25834676-25834733)
chr2 (101-162)||(38452911-38452972)
chr2 (119-159)||(7615295-7615335)
[»] scaffold0018 (2 HSPs)
scaffold0018 (101-162)||(44094-44155)
scaffold0018 (101-162)||(31463-31524)
[»] chr7 (40 HSPs)
chr7 (101-162)||(38920789-38920850)
chr7 (101-162)||(47848669-47848730)
chr7 (101-159)||(40169647-40169705)
chr7 (101-162)||(42187465-42187526)
chr7 (106-162)||(27893779-27893835)
chr7 (92-162)||(30200180-30200250)
chr7 (101-162)||(7189452-7189513)
chr7 (101-162)||(27021918-27021979)
chr7 (101-162)||(36136759-36136820)
chr7 (101-162)||(36514433-36514494)
chr7 (106-156)||(26742127-26742177)
chr7 (101-162)||(2885948-2886009)
chr7 (101-162)||(13859234-13859295)
chr7 (101-162)||(28020959-28021020)
chr7 (101-162)||(28628159-28628220)
chr7 (101-162)||(34869415-34869476)
chr7 (101-162)||(49029271-49029332)
chr7 (101-145)||(35713707-35713751)
chr7 (101-141)||(41948532-41948572)
chr7 (104-155)||(36101994-36102045)
chr7 (39-162)||(45836645-45836767)
chr7 (96-150)||(7273046-7273100)
chr7 (101-155)||(12841501-12841555)
chr7 (104-150)||(25579306-25579352)
chr7 (104-142)||(28542125-28542163)
chr7 (101-155)||(35906427-35906481)
chr7 (105-139)||(38135442-38135476)
chr7 (101-162)||(5335915-5335976)
chr7 (101-162)||(6374863-6374924)
chr7 (106-159)||(8492464-8492517)
chr7 (101-150)||(12966029-12966078)
chr7 (101-162)||(19262659-19262720)
chr7 (101-162)||(31005218-31005279)
chr7 (101-162)||(33072947-33073008)
chr7 (105-162)||(43281669-43281726)
chr7 (101-162)||(43282403-43282464)
chr7 (101-162)||(43491303-43491364)
chr7 (101-162)||(47796362-47796423)
chr7 (101-145)||(44855398-44855442)
chr7 (101-157)||(46356082-46356138)
[»] chr1 (35 HSPs)
chr1 (105-162)||(43423714-43423771)
chr1 (92-162)||(9599611-9599681)
chr1 (101-158)||(48431632-48431689)
chr1 (101-162)||(51812520-51812581)
chr1 (105-156)||(32404756-32404807)
chr1 (117-162)||(1661425-1661470)
chr1 (105-162)||(2544594-2544651)
chr1 (101-162)||(9509313-9509374)
chr1 (101-162)||(51440991-51441052)
chr1 (101-141)||(14226055-14226095)
chr1 (101-160)||(8343084-8343143)
chr1 (103-162)||(37463101-37463160)
chr1 (101-162)||(1210740-1210801)
chr1 (105-158)||(7921834-7921887)
chr1 (101-162)||(8671913-8671974)
chr1 (101-162)||(22090091-22090152)
chr1 (101-162)||(40416366-40416427)
chr1 (107-162)||(36340035-36340090)
chr1 (101-156)||(51602057-51602112)
chr1 (105-158)||(27704008-27704062)
chr1 (101-162)||(3819082-3819143)
chr1 (105-162)||(4001685-4001742)
chr1 (101-150)||(5338731-5338780)
chr1 (106-159)||(13827948-13828001)
chr1 (105-162)||(15085929-15085986)
chr1 (105-162)||(18469312-18469369)
chr1 (101-162)||(19936509-19936570)
chr1 (101-142)||(27848031-27848072)
chr1 (105-162)||(32082975-32083032)
chr1 (101-162)||(32231180-32231241)
chr1 (101-162)||(34792575-34792636)
chr1 (105-142)||(35828780-35828817)
chr1 (101-162)||(37263326-37263387)
chr1 (101-162)||(39140515-39140576)
chr1 (101-141)||(38868898-38868938)
[»] chr5 (32 HSPs)
chr5 (104-162)||(14667758-14667816)
chr5 (107-162)||(32516551-32516606)
chr5 (100-161)||(18351133-18351194)
chr5 (101-162)||(33667211-33667272)
chr5 (106-162)||(27888-27944)
chr5 (101-161)||(31636146-31636206)
chr5 (105-155)||(7359489-7359539)
chr5 (104-150)||(43475247-43475293)
chr5 (101-158)||(1275263-1275320)
chr5 (101-162)||(1287805-1287866)
chr5 (101-162)||(4496379-4496440)
chr5 (105-162)||(6888988-6889045)
chr5 (101-162)||(24178505-24178566)
chr5 (101-162)||(28676590-28676651)
chr5 (104-161)||(38341646-38341703)
chr5 (105-157)||(15168792-15168844)
chr5 (101-141)||(30588465-30588505)
chr5 (101-144)||(42199299-42199342)
chr5 (101-159)||(10082965-10083023)
chr5 (107-141)||(29938131-29938165)
chr5 (101-162)||(2075700-2075761)
chr5 (105-162)||(4026565-4026622)
chr5 (104-161)||(15588769-15588826)
chr5 (101-162)||(28977085-28977146)
chr5 (101-162)||(34273022-34273083)
chr5 (105-162)||(38684962-38685019)
chr5 (101-162)||(43558053-43558114)
chr5 (101-145)||(12492610-12492654)
chr5 (104-144)||(12577077-12577117)
chr5 (105-157)||(16347608-16347660)
chr5 (106-162)||(27249215-27249271)
chr5 (101-141)||(41833808-41833848)
[»] chr8 (26 HSPs)
chr8 (101-162)||(13171875-13171936)
chr8 (105-162)||(42493536-42493593)
chr8 (43-162)||(36545144-36545262)
chr8 (101-159)||(9695629-9695687)
chr8 (101-162)||(29700271-29700332)
chr8 (101-162)||(45512721-45512782)
chr8 (101-161)||(16917180-16917240)
chr8 (101-145)||(35643827-35643871)
chr8 (105-161)||(41444556-41444612)
chr8 (101-159)||(45419235-45419293)
chr8 (98-143)||(10824387-10824432)
chr8 (101-162)||(30113423-30113484)
chr8 (98-155)||(36143367-36143424)
chr8 (101-162)||(36565467-36565528)
chr8 (101-162)||(44373771-44373832)
chr8 (101-155)||(12491364-12491418)
chr8 (106-143)||(2518623-2518660)
chr8 (101-162)||(2796552-2796613)
chr8 (106-143)||(12611549-12611586)
chr8 (101-162)||(25985514-25985575)
chr8 (105-162)||(39946852-39946909)
chr8 (101-162)||(40813319-40813380)
chr8 (105-162)||(41972008-41972064)
chr8 (101-145)||(6483269-6483313)
chr8 (106-162)||(18125168-18125224)
chr8 (106-162)||(33511351-33511407)
[»] chr6 (17 HSPs)
chr6 (101-162)||(9593932-9593993)
chr6 (101-162)||(12890579-12890640)
chr6 (105-145)||(5897481-5897521)
chr6 (98-162)||(21870296-21870360)
chr6 (102-145)||(12134128-12134171)
chr6 (107-145)||(2079352-2079390)
chr6 (101-145)||(8364584-8364628)
chr6 (103-162)||(4948539-4948598)
chr6 (103-162)||(4955510-4955569)
chr6 (47-162)||(5258321-5258435)
chr6 (104-162)||(33084053-33084111)
chr6 (105-162)||(5631817-5631874)
chr6 (101-162)||(6641635-6641696)
chr6 (105-162)||(28085371-28085428)
chr6 (105-162)||(32755916-32755973)
chr6 (106-162)||(20427867-20427923)
chr6 (105-145)||(24665822-24665862)
[»] chr4 (38 HSPs)
chr4 (101-162)||(33709919-33709980)
chr4 (101-162)||(54470202-54470263)
chr4 (105-156)||(49987429-49987480)
chr4 (101-155)||(31459032-31459086)
chr4 (101-162)||(28236178-28236239)
chr4 (101-162)||(51252687-51252748)
chr4 (102-162)||(30621431-30621491)
chr4 (98-162)||(35555870-35555934)
chr4 (47-162)||(43433919-43434033)
chr4 (107-162)||(50662382-50662437)
chr4 (107-162)||(50680734-50680789)
chr4 (101-143)||(47611741-47611783)
chr4 (102-151)||(26356625-26356674)
chr4 (101-162)||(28497485-28497545)
chr4 (101-142)||(29398833-29398874)
chr4 (101-162)||(31960040-31960101)
chr4 (101-162)||(48174319-48174380)
chr4 (101-162)||(48622769-48622830)
chr4 (101-162)||(52569741-52569802)
chr4 (101-145)||(50471538-50471582)
chr4 (43-155)||(53707796-53707907)
chr4 (106-161)||(56225062-56225117)
chr4 (108-162)||(31403250-31403303)
chr4 (104-162)||(42293478-42293536)
chr4 (101-143)||(45185253-45185295)
chr4 (101-162)||(436224-436285)
chr4 (101-150)||(4440860-4440909)
chr4 (107-160)||(10775654-10775707)
chr4 (101-162)||(33227204-33227265)
chr4 (92-157)||(37773668-37773733)
chr4 (101-150)||(38570973-38571022)
chr4 (101-162)||(41192831-41192892)
chr4 (105-150)||(42639250-42639295)
chr4 (105-162)||(44047578-44047635)
chr4 (101-142)||(46715598-46715639)
chr4 (102-162)||(17900475-17900535)
chr4 (101-145)||(42285926-42285970)
chr4 (96-160)||(51421727-51421791)
[»] scaffold0113 (1 HSPs)
scaffold0113 (101-157)||(11822-11878)


Alignment Details
Target: chr3 (Bit Score: 49; Significance: 3e-19; HSPs: 31)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 90 - 150
Target Start/End: Original strand, 37534421 - 37534481
Alignment:
Q  90 tctctatgtaaatgcccaaaccacgtaagcctattttccaccatcttttctactatcggtg 150  Q
    |||||| ||| |||||||||||| |||||||||||||||||||||||||||||||||||||    
T  37534421 tctctacgtacatgcccaaaccaggtaagcctattttccaccatcttttctactatcggtg 37534481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 101 - 162
Target Start/End: Original strand, 50960859 - 50960920
Alignment:
Q  101 atgcccaaaccacgtaagcctattttccaccatcttttctactatcggtgttaccccaactc 162  Q
    ||||||||||||| ||||||||||||| ||||||||||||||||| |||| |||||||||||    
T  50960859 atgcccaaaccacctaagcctattttctaccatcttttctactataggtgctaccccaactc 50960920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 101 - 160
Target Start/End: Complemental strand, 54128434 - 54128375
Alignment:
Q  101 atgcccaaaccacgtaagcctattttccaccatcttttctactatcggtgttaccccaac 160  Q
    ||||||||||||| ||||||||||||| ||||||||||||||||| |||| |||||||||    
T  54128434 atgcccaaaccacctaagcctattttctaccatcttttctactataggtgctaccccaac 54128375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 40 - 162
Target Start/End: Original strand, 45289257 - 45289380
Alignment:
Q  40 ctaactatcctccatctgatttacttttcttactactgaacccacgggtatctctatgtaaatgcccaaaccacgtaagcctattttccaccatcttttc 139  Q
    |||||||||||||||||||| |||| ||||||||||  || | ||  || | ||| | ||  |||||||||||| |||||||||||||||||||||||||    
T  45289257 ctaactatcctccatctgatctactcttcttactacaaaatctacaagtgt-tctctctacgtgcccaaaccacctaagcctattttccaccatcttttc 45289355  T
Q  140 tact--atcggtgttaccccaactc 162  Q
    ||||  || |||| |||||||||||    
T  45289356 tactgaataggtgctaccccaactc 45289380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 101 - 155
Target Start/End: Original strand, 49503780 - 49503834
Alignment:
Q  101 atgcccaaaccacgtaagcctattttccaccatcttttctactatcggtgttacc 155  Q
    ||||||||||||| ||||||||||||| ||||||||||||||||| |||| ||||    
T  49503780 atgcccaaaccacctaagcctattttctaccatcttttctactataggtgctacc 49503834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 105 - 162
Target Start/End: Complemental strand, 26490367 - 26490310
Alignment:
Q  105 ccaaaccacgtaagcctattttccaccatcttttctactatcggtgttaccccaactc 162  Q
    ||||||||| ||||||||||||| ||||||||||||||||| |||| |||| ||||||    
T  26490367 ccaaaccacctaagcctattttctaccatcttttctactataggtgctacctcaactc 26490310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 105 - 162
Target Start/End: Original strand, 42510244 - 42510301
Alignment:
Q  105 ccaaaccacgtaagcctattttccaccatcttttctactatcggtgttaccccaactc 162  Q
    ||||||||| |||||||||||||||| |||||||||||||| |||| || ||||||||    
T  42510244 ccaaaccacctaagcctattttccactatcttttctactataggtgctatcccaactc 42510301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 104 - 162
Target Start/End: Complemental strand, 3987100 - 3987042
Alignment:
Q  104 cccaaaccacgtaagcctattttccaccatcttttctactatcggtgttaccccaactc 162  Q
    |||||||||| |||| ||| |||| ||||||||||||||||| |||| |||||||||||    
T  3987100 cccaaaccacctaagtctagtttctaccatcttttctactataggtgataccccaactc 3987042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 92 - 162
Target Start/End: Original strand, 44134047 - 44134117
Alignment:
Q  92 tctatgtaaatgcccaaaccacgtaagcctattttccaccatcttttctactatcggtgttaccccaactc 162  Q
    ||||| || ||| ||||||||| |||| |||||||||||||||||||||||||  || | |||||||||||    
T  44134047 tctatctagatgtccaaaccacctaagtctattttccaccatcttttctactagaggcgctaccccaactc 44134117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 101 - 162
Target Start/End: Original strand, 39600907 - 39600968
Alignment:
Q  101 atgcccaaaccacgtaagcctattttccaccatcttttctactatcggtgttaccccaactc 162  Q
    ||||| ||||||| ||||| | ||||||||||||||||||||||| |||  |||||||||||    
T  39600907 atgccaaaaccacctaagcttgttttccaccatcttttctactataggtactaccccaactc 39600968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 101 - 162
Target Start/End: Complemental strand, 52138856 - 52138795
Alignment:
Q  101 atgcccaaaccacgtaagcctattttccaccatcttttctactatcggtgttaccccaactc 162  Q
    ||||||||||||  ||||||||||||| |||| |||||||||||| |||| |||||| ||||    
T  52138856 atgcccaaaccatctaagcctattttctaccaacttttctactataggtgctacccccactc 52138795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 101 - 162
Target Start/End: Original strand, 54365203 - 54365263
Alignment:
Q  101 atgcccaaaccacgtaagcctattttccaccatcttttctactatcggtgttaccccaactc 162  Q
    ||||||||||||| ||||| |||||||| |||| ||||||||||| |||| |||||||||||    
T  54365203 atgcccaaaccacctaagc-tattttccgccatattttctactataggtgctaccccaactc 54365263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 105 - 161
Target Start/End: Complemental strand, 27917622 - 27917566
Alignment:
Q  105 ccaaaccacgtaagcctattttccaccatcttttctactatcggtgttaccccaact 161  Q
    ||||||||  ||||||||||| | ||||||||||||||||| |||| ||||||||||    
T  27917622 ccaaaccatctaagcctatttcctaccatcttttctactataggtgctaccccaact 27917566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 101 - 141
Target Start/End: Complemental strand, 39235194 - 39235154
Alignment:
Q  101 atgcccaaaccacgtaagcctattttccaccatcttttcta 141  Q
    ||||||||||||| ||||||||||||| |||||||||||||    
T  39235194 atgcccaaaccacctaagcctattttctaccatcttttcta 39235154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 101 - 145
Target Start/End: Original strand, 48734361 - 48734405
Alignment:
Q  101 atgcccaaaccacgtaagcctattttccaccatcttttctactat 145  Q
    ||||||||||||| ||||||||||||| ||||||| |||||||||    
T  48734361 atgcccaaaccacctaagcctattttctaccatctgttctactat 48734405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 101 - 144
Target Start/End: Complemental strand, 21200604 - 21200561
Alignment:
Q  101 atgcccaaaccacgtaagcctattttccaccatcttttctacta 144  Q
    ||||||||||||| |||| ||| |||||||||||||||||||||    
T  21200604 atgcccaaaccacctaagtctagtttccaccatcttttctacta 21200561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 101 - 156
Target Start/End: Original strand, 31337752 - 31337807
Alignment:
Q  101 atgcccaaaccacgtaagcctattttccaccatcttttctactatcggtgttaccc 156  Q
    |||| |||||||| |||||||| |||| ||||||||||||||||| |||| |||||    
T  31337752 atgctcaaaccacttaagcctagtttcaaccatcttttctactataggtgctaccc 31337807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 107 - 162
Target Start/End: Original strand, 36820193 - 36820248
Alignment:
Q  107 aaaccacgtaagcctattttccaccatcttttctactatcggtgttaccccaactc 162  Q
    ||||||| |||||||| |||||||||||||| ||| ||| |||| |||||||||||    
T  36820193 aaaccacctaagcctagtttccaccatctttgctaatataggtgctaccccaactc 36820248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 101 - 160
Target Start/End: Complemental strand, 38430904 - 38430845
Alignment:
Q  101 atgcccaaaccacgtaagcctattttccaccatcttttctactatcggtgttaccccaac 160  Q
    |||||||| | || ||||||||||||| ||||||||||||||||| |||| |||| ||||    
T  38430904 atgcccaatcaacctaagcctattttctaccatcttttctactataggtgctacctcaac 38430845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 104 - 162
Target Start/End: Complemental strand, 55244351 - 55244293
Alignment:
Q  104 cccaaaccacgtaagcctattttccaccatcttttctactatcggtgttaccccaactc 162  Q
    ||||| |||| |||||||  |||||||||||||||||||||| |||||| | |||||||    
T  55244351 cccaagccacctaagccttgtttccaccatcttttctactataggtgttgcaccaactc 55244293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 105 - 162
Target Start/End: Original strand, 344941 - 344998
Alignment:
Q  105 ccaaaccacgtaagcctattttccaccatcttttctactatcggtgttaccccaactc 162  Q
    |||||| || ||||||||||||| | |||||||||||||||  ||| |||||||||||    
T  344941 ccaaactacttaagcctattttctaacatcttttctactataagtgctaccccaactc 344998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 101 - 150
Target Start/End: Complemental strand, 19737053 - 19737004
Alignment:
Q  101 atgcccaaaccacgtaagcctattttccaccatcttttctactatcggtg 150  Q
    |||| |||||||| ||| ||||||||| ||||||||||||||||| ||||    
T  19737053 atgctcaaaccacctaaacctattttctaccatcttttctactataggtg 19737004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 101 - 150
Target Start/End: Complemental strand, 19757956 - 19757907
Alignment:
Q  101 atgcccaaaccacgtaagcctattttccaccatcttttctactatcggtg 150  Q
    |||| |||||||| ||| ||||||||| ||||||||||||||||| ||||    
T  19757956 atgctcaaaccacctaaacctattttctaccatcttttctactataggtg 19757907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 101 - 162
Target Start/End: Complemental strand, 28245493 - 28245432
Alignment:
Q  101 atgcccaaaccacgtaagcctattttccaccatcttttctactatcggtgttaccccaactc 162  Q
    ||||||||||||  |||| |||||||| |||| |||||||||||| |||| |||||| ||||    
T  28245493 atgcccaaaccatctaagtctattttctaccaacttttctactataggtgctacccccactc 28245432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 105 - 162
Target Start/End: Complemental strand, 35033198 - 35033141
Alignment:
Q  105 ccaaaccacgtaagcctattttccaccatcttttctactatcggtgttaccccaactc 162  Q
    ||||||||  ||||||||||||| |||| |||||||||||| |||| |||||| ||||    
T  35033198 ccaaaccatataagcctattttctaccaacttttctactataggtgctacccccactc 35033141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 101 - 142
Target Start/End: Original strand, 36868450 - 36868491
Alignment:
Q  101 atgcccaaaccacgtaagcctattttccaccatcttttctac 142  Q
    ||||||||||||| |||||||| ||||||||||||| |||||    
T  36868450 atgcccaaaccacctaagcctactttccaccatcttctctac 36868491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 145
Target Start/End: Original strand, 33272248 - 33272292
Alignment:
Q  101 atgcccaaaccacgtaagcctattttccaccatcttttctactat 145  Q
    ||||||||||||  ||||||||||||| |||| ||||||||||||    
T  33272248 atgcccaaaccatctaagcctattttctaccaacttttctactat 33272292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 102 - 162
Target Start/End: Original strand, 39535667 - 39535727
Alignment:
Q  102 tgcccaaaccacgtaagcctattttccaccatcttttctactatcggtgttaccccaactc 162  Q
    |||| ||||||| ||||||   |||| ||||||||||||||||| |||||| |||||||||    
T  39535667 tgcctaaaccacctaagccgggtttctaccatcttttctactataggtgttgccccaactc 39535727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 41842740 - 41842792
Alignment:
Q  104 cccaaaccacgtaagcctattttccaccatcttttctactatcggtgttaccc 156  Q
    |||||||||| |||| ||  |||||||||||||||||||||| |||| |||||    
T  41842740 cccaaaccacctaagactggtttccaccatcttttctactataggtgctaccc 41842792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 106 - 162
Target Start/End: Original strand, 42026767 - 42026823
Alignment:
Q  106 caaaccacgtaagcctattttccaccatcttttctactatcggtgttaccccaactc 162  Q
    |||||||| |||||||| |||||||| ||||||||||| |  ||| |||||||||||    
T  42026767 caaaccacctaagcctagtttccaccctcttttctactgtgagtgctaccccaactc 42026823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 102 - 162
Target Start/End: Complemental strand, 54279075 - 54279015
Alignment:
Q  102 tgcccaaaccacgtaagcctattttccaccatcttttctactatcggtgttaccccaactc 162  Q
    ||||||||||   ||||||||||||| |||| |||||||||||| |||| |||||| ||||    
T  54279075 tgcccaaaccgtctaagcctattttctaccaacttttctactataggtgctacccctactc 54279015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 47; Significance: 5e-18; HSPs: 20)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 43 - 161
Target Start/End: Original strand, 9556538 - 9556654
Alignment:
Q  43 actatcctccatctgatttacttttcttactactgaacccacgggtatctctatgtaaatgcccaaaccacgtaagcctattttccaccatcttttctac 142  Q
    ||||||||||||||||| ||||||||||||||| ||| | ||  || | ||| | || ||||| ||||||| ||||||||||||||||||| ||||||||    
T  9556538 actatcctccatctgatatacttttcttactacagaatctacttgtct-tctctctacatgcctaaaccacctaagcctattttccaccat-ttttctac 9556635  T
Q  143 tatcggtgttaccccaact 161  Q
    |||  ||||||||||||||    
T  9556636 tataagtgttaccccaact 9556654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 98 - 162
Target Start/End: Complemental strand, 11412780 - 11412716
Alignment:
Q  98 taaatgcccaaaccacgtaagcctattttccaccatcttttctactatcggtgttaccccaactc 162  Q
    ||||||||||||| || ||||||||||||||||||| ||||||||||| |||| |||||||||||    
T  11412780 taaatgcccaaacaacctaagcctattttccaccatattttctactataggtgctaccccaactc 11412716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 102 - 162
Target Start/End: Complemental strand, 12141599 - 12141539
Alignment:
Q  102 tgcccaaaccacgtaagcctattttccaccatcttttctactatcggtgttaccccaactc 162  Q
    |||||||||||| ||||||| ||||||||||||||||||||||| |||| |||||||||||    
T  12141599 tgcccaaaccacctaagcctcttttccaccatcttttctactataggtgctaccccaactc 12141539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 105 - 161
Target Start/End: Complemental strand, 18958959 - 18958903
Alignment:
Q  105 ccaaaccacgtaagcctattttccaccatcttttctactatcggtgttaccccaact 161  Q
    ||||||||| ||||||||||||||||||||||||||||||| |||| ||||||||||    
T  18958959 ccaaaccacctaagcctattttccaccatcttttctactataggtgctaccccaact 18958903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 105 - 158
Target Start/End: Original strand, 41763272 - 41763325
Alignment:
Q  105 ccaaaccacgtaagcctattttccaccatcttttctactatcggtgttacccca 158  Q
    ||||||||| ||||||||||||| |||| |||||||||||| ||||||||||||    
T  41763272 ccaaaccacctaagcctattttctaccaacttttctactataggtgttacccca 41763325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 98 - 150
Target Start/End: Complemental strand, 38860232 - 38860180
Alignment:
Q  98 taaatgcccaaaccacgtaagcctattttccaccatcttttctactatcggtg 150  Q
    |||||||| ||||||| |||||||||||||||| |||||||||||||| ||||    
T  38860232 taaatgcctaaaccacctaagcctattttccacaatcttttctactatgggtg 38860180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 105 - 162
Target Start/End: Complemental strand, 6219019 - 6218962
Alignment:
Q  105 ccaaaccacgtaagcctattttccaccatcttttctactatcggtgttaccccaactc 162  Q
    ||||||||| |||||||||| ||||| ||||||||||||||  ||| |||||||||||    
T  6219019 ccaaaccacctaagcctattatccactatcttttctactataagtgctaccccaactc 6218962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 102 - 159
Target Start/End: Original strand, 12882267 - 12882324
Alignment:
Q  102 tgcccaaaccacgtaagcctattttccaccatcttttctactatcggtgttaccccaa 159  Q
    |||||||||||| ||||||||||||| ||||||||||||| ||| |||| | ||||||    
T  12882267 tgcccaaaccacctaagcctattttctaccatcttttctagtataggtgctgccccaa 12882324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 105 - 162
Target Start/End: Original strand, 43752177 - 43752234
Alignment:
Q  105 ccaaaccacgtaagcctattttccaccatcttttctactatcggtgttaccccaactc 162  Q
    ||||| ||| ||||||||||||| |||| |||||||||||| |||| |||||||||||    
T  43752177 ccaaatcacctaagcctattttctaccaccttttctactataggtgctaccccaactc 43752234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 101 - 141
Target Start/End: Original strand, 13240971 - 13241011
Alignment:
Q  101 atgcccaaaccacgtaagcctattttccaccatcttttcta 141  Q
    ||||||||||||| |||||||| ||||||||||||||||||    
T  13240971 atgcccaaaccacctaagcctagtttccaccatcttttcta 13241011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 101 - 157
Target Start/End: Original strand, 43238319 - 43238375
Alignment:
Q  101 atgcccaaaccacgtaagcctattttccaccatcttttctactatcggtgttacccc 157  Q
    ||||||||||||  ||||||||||||| |||| |||||||||||| |||| ||||||    
T  43238319 atgcccaaaccatctaagcctattttctaccaacttttctactataggtgctacccc 43238375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 115 - 162
Target Start/End: Original strand, 19337090 - 19337137
Alignment:
Q  115 taagcctattttccaccatcttttctactatcggtgttaccccaactc 162  Q
    ||||| ||||||||||||||||| ||||||| |||| |||||||||||    
T  19337090 taagcttattttccaccatctttactactataggtgctaccccaactc 19337137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 107 - 150
Target Start/End: Complemental strand, 44411762 - 44411719
Alignment:
Q  107 aaaccacgtaagcctattttccaccatcttttctactatcggtg 150  Q
    |||||||| |||||||||||||||||||||| ||||||| ||||    
T  44411762 aaaccacggaagcctattttccaccatctttcctactataggtg 44411719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 104 - 162
Target Start/End: Complemental strand, 11017367 - 11017309
Alignment:
Q  104 cccaaaccacgtaagcctattttccaccatcttttctactatcggtgttaccccaactc 162  Q
    |||||||||| |||||| | ||||||| |||||||||||||| |||| |||| ||||||    
T  11017367 cccaaaccacttaagccgagtttccacgatcttttctactataggtgctacctcaactc 11017309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 101 - 162
Target Start/End: Complemental strand, 2610644 - 2610583
Alignment:
Q  101 atgcccaaaccacgtaagcctattttccaccatcttttctactatcggtgttaccccaactc 162  Q
    ||||||||||||  ||||||||||||| |||| |||||| ||||| |||| |||||| ||||    
T  2610644 atgcccaaaccatctaagcctattttctaccaacttttccactataggtgctacccccactc 2610583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 101 - 162
Target Start/End: Complemental strand, 8180836 - 8180775
Alignment:
Q  101 atgcccaaaccacgtaagcctattttccaccatcttttctactatcggtgttaccccaactc 162  Q
    ||||||||||||  ||||| ||||||| |||| |||||||||||| |||| |||||| ||||    
T  8180836 atgcccaaaccatctaagcttattttctaccaacttttctactataggtgctacccccactc 8180775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 101 - 145
Target Start/End: Original strand, 14197388 - 14197433
Alignment:
Q  101 atgcccaaaccacgtaa-gcctattttccaccatcttttctactat 145  Q
    ||||||||||||| ||| ||||| ||||||||||||||||||||||    
T  14197388 atgcccaaaccacctaaagcctagtttccaccatcttttctactat 14197433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 105 - 162
Target Start/End: Complemental strand, 25834733 - 25834676
Alignment:
Q  105 ccaaaccacgtaagcctattttccaccatcttttctactatcggtgttaccccaactc 162  Q
    ||||||||  ||||||||||||| |||| |||||||||||| |||| |||||| ||||    
T  25834733 ccaaaccatctaagcctattttctaccaacttttctactataggtgctacccccactc 25834676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 101 - 162
Target Start/End: Original strand, 38452911 - 38452972
Alignment:
Q  101 atgcccaaaccacgtaagcctattttccaccatcttttctactatcggtgttaccccaactc 162  Q
    ||||||||||||  ||||||||||||| |||| |||||||||||| | || |||||| ||||    
T  38452911 atgcccaaaccatctaagcctattttctaccaacttttctactatagatgctacccccactc 38452972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 159
Target Start/End: Complemental strand, 7615335 - 7615295
Alignment:
Q  119 cctattttccaccatcttttctactatcggtgttaccccaa 159  Q
    |||| ||| |||||||||||||||||| |||||||||||||    
T  7615335 cctagtttgcaccatcttttctactataggtgttaccccaa 7615295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 46; Significance: 2e-17; HSPs: 2)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 101 - 162
Target Start/End: Original strand, 44094 - 44155
Alignment:
Q  101 atgcccaaaccacgtaagcctattttccaccatcttttctactatcggtgttaccccaactc 162  Q
    ||||||||||||| |||||||||||||| |||||||||||||||| |||| |||||||||||    
T  44094 atgcccaaaccacctaagcctattttccgccatcttttctactataggtgctaccccaactc 44155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 101 - 162
Target Start/End: Complemental strand, 31524 - 31463
Alignment:
Q  101 atgcccaaaccacgtaagcctattttccaccatcttttctactatcggtgttaccccaactc 162  Q
    ||||||||||||  ||||||||||||| |||| |||||||||||| |||| |||||| ||||    
T  31524 atgcccaaaccatctaagcctattttctaccaacttttctactataggtgctacccccactc 31463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 46; Significance: 2e-17; HSPs: 40)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 101 - 162
Target Start/End: Complemental strand, 38920850 - 38920789
Alignment:
Q  101 atgcccaaaccacgtaagcctattttccaccatcttttctactatcggtgttaccccaactc 162  Q
    ||||||||||||| |||||||| |||||||||||||||||||||| |||| |||||||||||    
T  38920850 atgcccaaaccacttaagcctagtttccaccatcttttctactataggtgctaccccaactc 38920789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 101 - 162
Target Start/End: Complemental strand, 47848730 - 47848669
Alignment:
Q  101 atgcccaaaccacgtaagcctattttccaccatcttttctactatcggtgttaccccaactc 162  Q
    ||||||||||||| ||||||||||||||||||||||||||||||| || | |||||||||||    
T  47848730 atgcccaaaccacctaagcctattttccaccatcttttctactataggcgctaccccaactc 47848669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 101 - 159
Target Start/End: Complemental strand, 40169705 - 40169647
Alignment:
Q  101 atgcccaaaccacgtaagcctattttccaccatcttttctactatcggtgttaccccaa 159  Q
    ||||||||||||| |||||||||||||||||||||||||||||||  ||| ||||||||    
T  40169705 atgcccaaaccacctaagcctattttccaccatcttttctactataagtgctaccccaa 40169647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 101 - 162
Target Start/End: Complemental strand, 42187526 - 42187465
Alignment:
Q  101 atgcccaaaccacgtaagcctattttccaccatcttttctactatcggtgttaccccaactc 162  Q
    ||||||||||||| ||||||||||||||||||||||||||| ||| |||| |||||| ||||    
T  42187526 atgcccaaaccacctaagcctattttccaccatcttttctattataggtgctaccccgactc 42187465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 106 - 162
Target Start/End: Original strand, 27893779 - 27893835
Alignment:
Q  106 caaaccacgtaagcctattttccaccatcttttctactatcggtgttaccccaactc 162  Q
    |||||||| ||||||||||||||||||||| ||||||||| ||||||||| ||||||    
T  27893779 caaaccacctaagcctattttccaccatctattctactataggtgttacctcaactc 27893835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 92 - 162
Target Start/End: Original strand, 30200180 - 30200250
Alignment:
Q  92 tctatgtaaatgcccaaaccacgtaagcctattttccaccatcttttctactatcggtgttaccccaactc 162  Q
    ||||| || ||||| ||| ||| |||||||| |||||||||||||||||||||| |||||||||| |||||    
T  30200180 tctatttacatgccaaaatcacctaagcctagtttccaccatcttttctactataggtgttaccctaactc 30200250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 101 - 162
Target Start/End: Original strand, 7189452 - 7189513
Alignment:
Q  101 atgcccaaaccacgtaagcctattttccaccatcttttctactatcggtgttaccccaactc 162  Q
    ||||||||||||| ||||| ||||||| ||||||||||||||||| ||||  ||||||||||    
T  7189452 atgcccaaaccacctaagcttattttctaccatcttttctactataggtgcgaccccaactc 7189513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 101 - 162
Target Start/End: Original strand, 27021918 - 27021979
Alignment:
Q  101 atgcccaaaccacgtaagcctattttccaccatcttttctactatcggtgttaccccaactc 162  Q
    ||||||||||||| |||||||| ||| ||||| |||||||||||| |||| |||||||||||    
T  27021918 atgcccaaaccacctaagcctagttttcaccaacttttctactataggtgctaccccaactc 27021979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 101 - 162
Target Start/End: Complemental strand, 36136820 - 36136759
Alignment:
Q  101 atgcccaaaccacgtaagcctattttccaccatcttttctactatcggtgttaccccaactc 162  Q
    |||||||||| || |||| |||||||| ||||||||||||||||| |||| |||||||||||    
T  36136820 atgcccaaacaacctaagactattttctaccatcttttctactataggtgctaccccaactc 36136759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 101 - 162
Target Start/End: Original strand, 36514433 - 36514494
Alignment:
Q  101 atgcccaaaccacgtaagcctattttccaccatcttttctactatcggtgttaccccaactc 162  Q
    ||||||||||||| |||| ||| |||| ||||||||||||||||| |||| |||||||||||    
T  36514433 atgcccaaaccacctaagtctagtttctaccatcttttctactataggtgctaccccaactc 36514494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 106 - 156
Target Start/End: Original strand, 26742127 - 26742177
Alignment:
Q  106 caaaccacgtaagcctattttccaccatcttttctactatcggtgttaccc 156  Q
    |||||||| ||| ||||||||||||||||||||||||||| |||| |||||    
T  26742127 caaaccacctaatcctattttccaccatcttttctactataggtgctaccc 26742177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 101 - 162
Target Start/End: Original strand, 2885948 - 2886009
Alignment:
Q  101 atgcccaaaccacgtaagcctattttccaccatcttttctactatcggtgttaccccaactc 162  Q
    ||||||||||||  ||||||||||||| |||| |||||||||||| |||| |||||| ||||    
T  2885948 atgcccaaaccatctaagcctattttctaccaacttttctactataggtgctacccccactc 2886009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 101 - 162
Target Start/End: Original strand, 13859234 - 13859295
Alignment:
Q  101 atgcccaaaccacgtaagcctattttccaccatcttttctactatcggtgttaccccaactc 162  Q
    ||||||||||||  ||||||||||||| |||| |||||||||||| |||| |||||| ||||    
T  13859234 atgcccaaaccatctaagcctattttctaccaacttttctactataggtgctacccccactc 13859295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 101 - 162
Target Start/End: Complemental strand, 28021020 - 28020959
Alignment:
Q  101 atgcccaaaccacgtaagcctattttccaccatcttttctactatcggtgttaccccaactc 162  Q
    ||||||||||||| |||||| | ||||||||||||||||||| ||  ||| |||||||||||    
T  28021020 atgcccaaaccacctaagccaagtttccaccatcttttctacgataagtgctaccccaactc 28020959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 101 - 162
Target Start/End: Original strand, 28628159 - 28628220
Alignment:
Q  101 atgcccaaaccacgtaagcctattttccaccatcttttctactatcggtgttaccccaactc 162  Q
    ||||||||||||| |||||| ||||||||||||| |||||||| | |||| ||| |||||||    
T  28628159 atgcccaaaccacctaagccaattttccaccatcatttctactctaggtgctactccaactc 28628220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 101 - 162
Target Start/End: Complemental strand, 34869476 - 34869415
Alignment:
Q  101 atgcccaaaccacgtaagcctattttccaccatcttttctactatcggtgttaccccaactc 162  Q
    ||||||||||||  ||||||||||||| |||| |||||||||||| |||| |||||| ||||    
T  34869476 atgcccaaaccatctaagcctattttctaccaacttttctactataggtgctacccccactc 34869415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 101 - 162
Target Start/End: Complemental strand, 49029332 - 49029271
Alignment:
Q  101 atgcccaaaccacgtaagcctattttccaccatcttttctactatcggtgttaccccaactc 162  Q
    ||||||||||||  ||||||||||||| |||| |||||||||||| |||| |||||| ||||    
T  49029332 atgcccaaaccatctaagcctattttctaccaacttttctactataggtgctacccccactc 49029271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 101 - 145
Target Start/End: Complemental strand, 35713751 - 35713707
Alignment:
Q  101 atgcccaaaccacgtaagcctattttccaccatcttttctactat 145  Q
    ||||||||||||| ||||||||||||||||||| ||||| |||||    
T  35713751 atgcccaaaccacctaagcctattttccaccattttttcaactat 35713707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 101 - 141
Target Start/End: Complemental strand, 41948572 - 41948532
Alignment:
Q  101 atgcccaaaccacgtaagcctattttccaccatcttttcta 141  Q
    ||||||||||||| |||||||| ||||||||||||||||||    
T  41948572 atgcccaaaccacttaagcctagtttccaccatcttttcta 41948532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 104 - 155
Target Start/End: Original strand, 36101994 - 36102045
Alignment:
Q  104 cccaaaccacgtaagcctattttccaccatcttttctactatcggtgttacc 155  Q
    |||||||||| ||||||||||||||| ||||||||||| ||| |||| ||||    
T  36101994 cccaaaccacctaagcctattttccaacatcttttctattataggtgctacc 36102045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 39 - 162
Target Start/End: Original strand, 45836645 - 45836767
Alignment:
Q  39 cctaactatcctccatctgatttacttttcttactactgaacccacgggtatctctatgtaaatgcccaaaccacgtaagcctattttccaccatctttt 138  Q
    ||||||| |||||||| |||| |||| ||||||| || | | | |||||| | ||| | || ||| ||||||||  ||||||||||||| |||| |||||    
T  45836645 cctaactctcctccatttgatctactcttcttacaacggcatctacgggtct-tctctctacatgtccaaaccatctaagcctattttctaccaactttt 45836743  T
Q  139 ctactatcggtgttaccccaactc 162  Q
    ||||||| |||| |||||| ||||    
T  45836744 ctactataggtgctacccccactc 45836767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 150
Target Start/End: Complemental strand, 7273100 - 7273046
Alignment:
Q  96 tgtaaatgcccaaaccacgtaagcctattttccaccatcttttctactatcggtg 150  Q
    |||| ||||||||||||  ||||||||||||| |||| |||||||||||| ||||    
T  7273100 tgtacatgcccaaaccatctaagcctattttctaccaacttttctactataggtg 7273046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 101 - 155
Target Start/End: Original strand, 12841501 - 12841555
Alignment:
Q  101 atgcccaaaccacgtaagcctattttccaccatcttttctactatcggtgttacc 155  Q
    ||||||||||||  ||||||||||||| |||| |||||||||||| |||| ||||    
T  12841501 atgcccaaaccatctaagcctattttctaccaacttttctactataggtgctacc 12841555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 104 - 150
Target Start/End: Original strand, 25579306 - 25579352
Alignment:
Q  104 cccaaaccacgtaagcctattttccaccatcttttctactatcggtg 150  Q
    |||||||||| ||||||||||||||||||| |||||| |||| ||||    
T  25579306 cccaaaccacctaagcctattttccaccattttttctgctatgggtg 25579352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 104 - 142
Target Start/End: Original strand, 28542125 - 28542163
Alignment:
Q  104 cccaaaccacgtaagcctattttccaccatcttttctac 142  Q
    |||||||||| |||| |||||||||||||||||||||||    
T  28542125 cccaaaccacctaaggctattttccaccatcttttctac 28542163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 101 - 155
Target Start/End: Original strand, 35906427 - 35906481
Alignment:
Q  101 atgcccaaaccacgtaagcctattttccaccatcttttctactatcggtgttacc 155  Q
    ||||||||||||  ||||||||||||| |||| |||||||||||| |||| ||||    
T  35906427 atgcccaaaccatctaagcctattttctaccaacttttctactataggtgctacc 35906481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 105 - 139
Target Start/End: Original strand, 38135442 - 38135476
Alignment:
Q  105 ccaaaccacgtaagcctattttccaccatcttttc 139  Q
    ||||||||| |||||||||||||||||||||||||    
T  38135442 ccaaaccacctaagcctattttccaccatcttttc 38135476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 101 - 162
Target Start/End: Complemental strand, 5335976 - 5335915
Alignment:
Q  101 atgcccaaaccacgtaagcctattttccaccatcttttctactatcggtgttaccccaactc 162  Q
    ||||||||||||| |||| ||| |||| ||||||||| ||||||| | || |||||||||||    
T  5335976 atgcccaaaccacctaagtctagtttcgaccatctttcctactatagatgctaccccaactc 5335915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 101 - 162
Target Start/End: Complemental strand, 6374924 - 6374863
Alignment:
Q  101 atgcccaaaccacgtaagcctattttccaccatcttttctactatcggtgttaccccaactc 162  Q
    |||| |||||||  ||||||||||||| |||| |||||||||||| |||| |||||| ||||    
T  6374924 atgctcaaaccatctaagcctattttctaccaacttttctactataggtgctacccccactc 6374863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 106 - 159
Target Start/End: Original strand, 8492464 - 8492517
Alignment:
Q  106 caaaccacgtaagcctattttccaccatcttttctactatcggtgttaccccaa 159  Q
    |||||||| | ||||||||||| |||||| ||| |||||| |||||||||||||    
T  8492464 caaaccaccttagcctattttctaccatcatttttactataggtgttaccccaa 8492517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 101 - 150
Target Start/End: Complemental strand, 12966078 - 12966029
Alignment:
Q  101 atgcccaaaccacgtaagcctattttccaccatcttttctactatcggtg 150  Q
    ||||||||||||| ||||| || ||||||||||||||||| |||| ||||    
T  12966078 atgcccaaaccacctaagcatagtttccaccatcttttcttctataggtg 12966029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 101 - 162
Target Start/End: Original strand, 19262659 - 19262720
Alignment:
Q  101 atgcccaaaccacgtaagcctattttccaccatcttttctactatcggtgttaccccaactc 162  Q
    |||| |||||||| |||||| | |||| |||||||||||||| || |||| |||||||||||    
T  19262659 atgctcaaaccacctaagccaagtttctaccatcttttctacaataggtgctaccccaactc 19262720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 101 - 162
Target Start/End: Complemental strand, 31005279 - 31005218
Alignment:
Q  101 atgcccaaaccacgtaagcctattttccaccatcttttctactatcggtgttaccccaactc 162  Q
    ||||||||||||  ||| ||||||||| |||| |||||||||||| |||| |||||| ||||    
T  31005279 atgcccaaaccatctaaacctattttctaccaacttttctactataggtgctacccccactc 31005218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 101 - 162
Target Start/End: Complemental strand, 33073008 - 33072947
Alignment:
Q  101 atgcccaaaccacgtaagcctattttccaccatcttttctactatcggtgttaccccaactc 162  Q
    ||||||||| ||  ||||||||||||| |||| |||||||||||| |||| |||||| ||||    
T  33073008 atgcccaaatcatctaagcctattttctaccaacttttctactataggtgctacccccactc 33072947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 105 - 162
Target Start/End: Complemental strand, 43281726 - 43281669
Alignment:
Q  105 ccaaaccacgtaagcctattttccaccatcttttctactatcggtgttaccccaactc 162  Q
    ||||||||  ||||||||||||| |||| |||||||||||| |||| |||||| ||||    
T  43281726 ccaaaccatctaagcctattttctaccaacttttctactataggtgctacccccactc 43281669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 101 - 162
Target Start/End: Complemental strand, 43282464 - 43282403
Alignment:
Q  101 atgcccaaaccacgtaagcctattttccaccatcttttctactatcggtgttaccccaactc 162  Q
    ||||||||  ||| |||||||| ||||||||  |||||||||||| |||| |||||||||||    
T  43282464 atgcccaattcacctaagcctagtttccaccgacttttctactataggtgctaccccaactc 43282403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 101 - 162
Target Start/End: Complemental strand, 43491364 - 43491303
Alignment:
Q  101 atgcccaaaccacgtaagcctattttccaccatcttttctactatcggtgttaccccaactc 162  Q
    ||||||||||||  ||||||||||||| ||||  |||| |||||| ||||||||||| ||||    
T  43491364 atgcccaaaccatctaagcctattttctaccaatttttatactataggtgttacccctactc 43491303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 101 - 162
Target Start/End: Original strand, 47796362 - 47796423
Alignment:
Q  101 atgcccaaaccacgtaagcctattttccaccatcttttctactatcggtgttaccccaactc 162  Q
    ||||||||||||| || |||||||||| |||| |||||||||||| | || ||| |||||||    
T  47796362 atgcccaaaccacctacgcctattttcaaccaccttttctactatagttggtactccaactc 47796423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 145
Target Start/End: Original strand, 44855398 - 44855442
Alignment:
Q  101 atgcccaaaccacgtaagcctattttccaccatcttttctactat 145  Q
    ||||||||||||  ||||||||||||| |||| ||||||||||||    
T  44855398 atgcccaaaccatctaagcctattttctaccaacttttctactat 44855442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 157
Target Start/End: Original strand, 46356082 - 46356138
Alignment:
Q  101 atgcccaaaccacgtaagcctattttccaccatcttttctactatcggtgttacccc 157  Q
    ||||||||||||  ||| ||||||||| |||| |||||||||||| |||| ||||||    
T  46356082 atgcccaaaccatctaaacctattttctaccaacttttctactataggtgctacccc 46356138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 46; Significance: 2e-17; HSPs: 35)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 105 - 162
Target Start/End: Complemental strand, 43423771 - 43423714
Alignment:
Q  105 ccaaaccacgtaagcctattttccaccatcttttctactatcggtgttaccccaactc 162  Q
    ||||||||| |||||||| |||||||||||||||||||||| ||||||||||||||||    
T  43423771 ccaaaccacctaagcctagtttccaccatcttttctactataggtgttaccccaactc 43423714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 92 - 162
Target Start/End: Original strand, 9599611 - 9599681
Alignment:
Q  92 tctatgtaaatgcccaaaccacgtaagcctattttccaccatcttttctactatcggtgttaccccaactc 162  Q
    ||||| || |||||| |||||| ||||||||||||| ||||||||||||||||| |||||||| |||||||    
T  9599611 tctatttatatgcccgaaccacctaagcctattttctaccatcttttctactataggtgttactccaactc 9599681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 101 - 158
Target Start/End: Original strand, 48431632 - 48431689
Alignment:
Q  101 atgcccaaaccacgtaagcctattttccaccatcttttctactatcggtgttacccca 158  Q
    ||||||||||||| ||||||||||||||||||||||||||||||| || | |||||||    
T  48431632 atgcccaaaccacctaagcctattttccaccatcttttctactataggggctacccca 48431689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 101 - 162
Target Start/End: Complemental strand, 51812581 - 51812520
Alignment:
Q  101 atgcccaaaccacgtaagcctattttccaccatcttttctactatcggtgttaccccaactc 162  Q
    ||||||||| ||| |||||||| |||||||||||||||||||||| | ||||||||||||||    
T  51812581 atgcccaaatcacataagcctagtttccaccatcttttctactatagttgttaccccaactc 51812520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 105 - 156
Target Start/End: Original strand, 32404756 - 32404807
Alignment:
Q  105 ccaaaccacgtaagcctattttccaccatcttttctactatcggtgttaccc 156  Q
    ||||||||| |||||||||||||||||||||||| |||||| ||||||||||    
T  32404756 ccaaaccacctaagcctattttccaccatcttttttactataggtgttaccc 32404807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 117 - 162
Target Start/End: Complemental strand, 1661470 - 1661425
Alignment:
Q  117 agcctattttccaccatcttttctactatcggtgttaccccaactc 162  Q
    ||||||||||||||||||||||||||||| |||| |||||||||||    
T  1661470 agcctattttccaccatcttttctactataggtgctaccccaactc 1661425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 105 - 162
Target Start/End: Complemental strand, 2544651 - 2544594
Alignment:
Q  105 ccaaaccacgtaagcctattttccaccatcttttctactatcggtgttaccccaactc 162  Q
    ||||||||| |||| || ||||||||||||||||||||||| |||| |||||||||||    
T  2544651 ccaaaccacctaagtctgttttccaccatcttttctactataggtgctaccccaactc 2544594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 101 - 162
Target Start/End: Complemental strand, 9509374 - 9509313
Alignment:
Q  101 atgcccaaaccacgtaagcctattttccaccatcttttctactatcggtgttaccccaactc 162  Q
    |||||||||| || ||||||||||||  ||||||||||||||||| |||| |||||||||||    
T  9509374 atgcccaaactacctaagcctattttttaccatcttttctactataggtgctaccccaactc 9509313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 101 - 162
Target Start/End: Original strand, 51440991 - 51441052
Alignment:
Q  101 atgcccaaaccacgtaagcctattttccaccatcttttctactatcggtgttaccccaactc 162  Q
    ||||||||||||  ||||||||||||| |||| |||||||||||| ||||||||||| ||||    
T  51440991 atgcccaaaccatctaagcctattttctaccaacttttctactataggtgttacccccactc 51441052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 101 - 141
Target Start/End: Original strand, 14226055 - 14226095
Alignment:
Q  101 atgcccaaaccacgtaagcctattttccaccatcttttcta 141  Q
    ||||||||||||| |||||||||||||||||||||||||||    
T  14226055 atgcccaaaccacctaagcctattttccaccatcttttcta 14226095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 101 - 160
Target Start/End: Original strand, 8343084 - 8343143
Alignment:
Q  101 atgcccaaaccacgtaagcctattttccaccatcttttctactatcggtgttaccccaac 160  Q
    |||||||  |||| |||||||| |||||||||||||||||||||  ||||||||||||||    
T  8343084 atgcccagtccacctaagcctagtttccaccatcttttctactaaaggtgttaccccaac 8343143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 103 - 162
Target Start/End: Original strand, 37463101 - 37463160
Alignment:
Q  103 gcccaaaccacgtaagcctattttccaccatcttttctactatcggtgttaccccaactc 162  Q
    ||||||||||| ||||||||||||| ||  ||||||||||||| |||| |||||||||||    
T  37463101 gcccaaaccacctaagcctattttctactgtcttttctactataggtgctaccccaactc 37463160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 101 - 162
Target Start/End: Complemental strand, 1210801 - 1210740
Alignment:
Q  101 atgcccaaaccacgtaagcctattttccaccatcttttctactatcggtgttaccccaactc 162  Q
    ||||||||||||  ||||||||||||| |||| |||||||||||| |||| |||||| ||||    
T  1210801 atgcccaaaccatctaagcctattttctaccaacttttctactataggtgctacccccactc 1210740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 105 - 158
Target Start/End: Complemental strand, 7921887 - 7921834
Alignment:
Q  105 ccaaaccacgtaagcctattttccaccatcttttctactatcggtgttacccca 158  Q
    ||||||||| ||| |||| |||||||||||||||||||||| ||| ||||||||    
T  7921887 ccaaaccacataaacctagtttccaccatcttttctactataggttttacccca 7921834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 101 - 162
Target Start/End: Complemental strand, 8671974 - 8671913
Alignment:
Q  101 atgcccaaaccacgtaagcctattttccaccatcttttctactatcggtgttaccccaactc 162  Q
    ||||||||||||  ||||||||||||| |||| |||||||||||| |||| |||||| ||||    
T  8671974 atgcccaaaccatctaagcctattttctaccaacttttctactataggtgctacccccactc 8671913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 101 - 162
Target Start/End: Complemental strand, 22090152 - 22090091
Alignment:
Q  101 atgcccaaaccacgtaagcctattttccaccatcttttctactatcggtgttaccccaactc 162  Q
    ||||||||||||  ||||||||||||| |||| |||||||||||| |||| |||||| ||||    
T  22090152 atgcccaaaccatctaagcctattttctaccaacttttctactataggtgctacccccactc 22090091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 101 - 162
Target Start/End: Complemental strand, 40416427 - 40416366
Alignment:
Q  101 atgcccaaaccacgtaagcctattttccaccatcttttctactatcggtgttaccccaactc 162  Q
    ||||| ||||||| |||||||  |||||||||||||||||||||| |||| ||| |||||||    
T  40416427 atgcctaaaccacctaagcctcgtttccaccatcttttctactataggtgctactccaactc 40416366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 107 - 162
Target Start/End: Original strand, 36340035 - 36340090
Alignment:
Q  107 aaaccacgtaagcctattttccaccatcttttctactatcggtgttaccccaactc 162  Q
    ||||||| ||| ||||||||||||||||||||||| ||| |||| ||| |||||||    
T  36340035 aaaccacctaaacctattttccaccatcttttctaatataggtgctacaccaactc 36340090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 101 - 156
Target Start/End: Complemental strand, 51602112 - 51602057
Alignment:
Q  101 atgcccaaaccacgtaagcctattttccaccatcttttctactatcggtgttaccc 156  Q
    ||||||||||||  ||||||||||||| |||| |||||||||||| |||| |||||    
T  51602112 atgcccaaaccatctaagcctattttctaccaacttttctactataggtgctaccc 51602057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 105 - 158
Target Start/End: Complemental strand, 27704062 - 27704008
Alignment:
Q  105 ccaaaccacgtaagcctattttccaccatcttttctactat-cggtgttacccca 158  Q
    ||||||||| ||||| | |||||||||||||||||||||||  ||||||||||||    
T  27704062 ccaaaccacataagcatgttttccaccatcttttctactataaggtgttacccca 27704008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 101 - 162
Target Start/End: Original strand, 3819082 - 3819143
Alignment:
Q  101 atgcccaaaccacgtaagcctattttccaccatcttttctactatcggtgttaccccaactc 162  Q
    ||||||||||||| |||| ||| || |||||||||||||||| || |||| |||| ||||||    
T  3819082 atgcccaaaccacttaagtctagttaccaccatcttttctaccataggtgctacctcaactc 3819143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 105 - 162
Target Start/End: Original strand, 4001685 - 4001742
Alignment:
Q  105 ccaaaccacgtaagcctattttccaccatcttttctactatcggtgttaccccaactc 162  Q
    ||||||||  ||||||||||||| |||| |||||||||||| |||| |||||| ||||    
T  4001685 ccaaaccatctaagcctattttctaccaacttttctactataggtgctacccccactc 4001742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 101 - 150
Target Start/End: Complemental strand, 5338780 - 5338731
Alignment:
Q  101 atgcccaaaccacgtaagcctattttccaccatcttttctactatcggtg 150  Q
    ||||||||||||| |||||  | |||||||||||||||||||||| ||||    
T  5338780 atgcccaaaccacctaagctcagtttccaccatcttttctactataggtg 5338731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 106 - 159
Target Start/End: Original strand, 13827948 - 13828001
Alignment:
Q  106 caaaccacgtaagcctattttccaccatcttttctactatcggtgttaccccaa 159  Q
    |||||||| ||| |||| |||||||||||||||||||||| |||| | ||||||    
T  13827948 caaaccacctaaccctagtttccaccatcttttctactataggtgctgccccaa 13828001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 105 - 162
Target Start/End: Complemental strand, 15085986 - 15085929
Alignment:
Q  105 ccaaaccacgtaagcctattttccaccatcttttctactatcggtgttaccccaactc 162  Q
    ||||||||  ||||||||||||| |||| |||||||||||| |||| |||||| ||||    
T  15085986 ccaaaccatctaagcctattttctaccaacttttctactataggtgctacccccactc 15085929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 105 - 162
Target Start/End: Original strand, 18469312 - 18469369
Alignment:
Q  105 ccaaaccacgtaagcctattttccaccatcttttctactatcggtgttaccccaactc 162  Q
    |||||| || ||| ||||||||| | |||||| |||||||| ||||||||||||||||    
T  18469312 ccaaactacctaatcctattttctatcatcttctctactataggtgttaccccaactc 18469369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 101 - 162
Target Start/End: Complemental strand, 19936570 - 19936509
Alignment:
Q  101 atgcccaaaccacgtaagcctattttccaccatcttttctactatcggtgttaccccaactc 162  Q
    ||||||||||||| ||| ||||||||| |||||||||| | |||| |||| ||||| |||||    
T  19936570 atgcccaaaccacataaacctattttctaccatcttttttgctataggtgctaccctaactc 19936509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 101 - 142
Target Start/End: Original strand, 27848031 - 27848072
Alignment:
Q  101 atgcccaaaccacgtaagcctattttccaccatcttttctac 142  Q
    ||||||||||||| ||||| ||||||| ||||||||||||||    
T  27848031 atgcccaaaccacctaagcttattttctaccatcttttctac 27848072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 105 - 162
Target Start/End: Original strand, 32082975 - 32083032
Alignment:
Q  105 ccaaaccacgtaagcctattttccaccatcttttctactatcggtgttaccccaactc 162  Q
    ||||||||  ||||||||||||| |||| |||||||||||| |||| |||||| ||||    
T  32082975 ccaaaccatctaagcctattttctaccaacttttctactataggtgctacccccactc 32083032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 101 - 162
Target Start/End: Original strand, 32231180 - 32231241
Alignment:
Q  101 atgcccaaaccacgtaagcctattttccaccatcttttctactatcggtgttaccccaactc 162  Q
    ||||||||||||  ||||||||||||| ||||  ||||||||||| |||| |||||| ||||    
T  32231180 atgcccaaaccatctaagcctattttctaccaatttttctactataggtgctacccccactc 32231241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 101 - 162
Target Start/End: Original strand, 34792575 - 34792636
Alignment:
Q  101 atgcccaaaccacgtaagcctattttccaccatcttttctactatcggtgttaccccaactc 162  Q
    ||||||||||||  |||||||| |||| |||| |||||||||||| |||| |||||| ||||    
T  34792575 atgcccaaaccatctaagcctactttctaccaacttttctactataggtgctacccccactc 34792636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 105 - 142
Target Start/End: Original strand, 35828780 - 35828817
Alignment:
Q  105 ccaaaccacgtaagcctattttccaccatcttttctac 142  Q
    ||||||||| ||| ||||||||||||||||||||||||    
T  35828780 ccaaaccacctaaccctattttccaccatcttttctac 35828817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 101 - 162
Target Start/End: Complemental strand, 37263387 - 37263326
Alignment:
Q  101 atgcccaaaccacgtaagcctattttccaccatcttttctactatcggtgttaccccaactc 162  Q
    |||||||||||||  ||| ||| |||| || |||||||||||||| |||| |||||||||||    
T  37263387 atgcccaaaccactgaagtctagtttctactatcttttctactataggtgctaccccaactc 37263326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 101 - 162
Target Start/End: Complemental strand, 39140576 - 39140515
Alignment:
Q  101 atgcccaaaccacgtaagcctattttccaccatcttttctactatcggtgttaccccaactc 162  Q
    ||||||||||||| |||||| |||||   |||||||||||||||| |||| ||| |||||||    
T  39140576 atgcccaaaccacctaagccaattttttgccatcttttctactataggtgctacgccaactc 39140515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 141
Target Start/End: Complemental strand, 38868938 - 38868898
Alignment:
Q  101 atgcccaaaccacgtaagcctattttccaccatcttttcta 141  Q
    ||||||||||||| |||||| | ||||||||||||||||||    
T  38868938 atgcccaaaccacctaagccgagtttccaccatcttttcta 38868898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 104 - 162
Target Start/End: Complemental strand, 14667816 - 14667758
Alignment:
Q  104 cccaaaccacgtaagcctattttccaccatcttttctactatcggtgttaccccaactc 162  Q
    |||||||||| |||| |||||||||||||||||||||||||| |||| |||||||||||    
T  14667816 cccaaaccacctaagtctattttccaccatcttttctactataggtgctaccccaactc 14667758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 107 - 162
Target Start/End: Complemental strand, 32516606 - 32516551
Alignment:
Q  107 aaaccacgtaagcctattttccaccatcttttctactatcggtgttaccccaactc 162  Q
    ||||||| |||||||||||||||||||||||||||||||  ||||||| |||||||    
T  32516606 aaaccacctaagcctattttccaccatcttttctactataagtgttactccaactc 32516551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 100 - 161
Target Start/End: Original strand, 18351133 - 18351194
Alignment:
Q  100 aatgcccaaaccacgtaagcctattttccaccatcttttctactatcggtgttaccccaact 161  Q
    |||||||||||||| |||||||| |||| ||||| ||||||||||| |||| ||||||||||    
T  18351133 aatgcccaaaccacctaagcctagtttctaccatattttctactataggtgctaccccaact 18351194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 101 - 162
Target Start/End: Complemental strand, 33667272 - 33667211
Alignment:
Q  101 atgcccaaaccacgtaagcctattttccaccatcttttctactatcggtgttaccccaactc 162  Q
    ||||||||||||| |||| ||| |||| ||||||||||||||||| |||| |||||||||||    
T  33667272 atgcccaaaccacctaagtctagtttctaccatcttttctactataggtgctaccccaactc 33667211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 106 - 162
Target Start/End: Complemental strand, 27944 - 27888
Alignment:
Q  106 caaaccacgtaagcctattttccaccatcttttctactatcggtgttaccccaactc 162  Q
    |||||||| ||||||||||||||| ||||||||||||||| |||| ||||| |||||    
T  27944 caaaccacctaagcctattttccatcatcttttctactataggtgctaccctaactc 27888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 101 - 161
Target Start/End: Original strand, 31636146 - 31636206
Alignment:
Q  101 atgcccaaaccacgtaagcctattttccaccatcttttctactatcggtgttaccccaact 161  Q
    ||||||||||||| |||| ||| |||| ||||||||||||||||| |||| ||||||||||    
T  31636146 atgcccaaaccacctaagtctagtttctaccatcttttctactataggtgctaccccaact 31636206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 105 - 155
Target Start/End: Original strand, 7359489 - 7359539
Alignment:
Q  105 ccaaaccacgtaagcctattttccaccatcttttctactatcggtgttacc 155  Q
    ||||||||| ||| ||||||||||||||| ||||||||||| |||||||||    
T  7359489 ccaaaccacctaaacctattttccaccatattttctactataggtgttacc 7359539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 104 - 150
Target Start/End: Complemental strand, 43475293 - 43475247
Alignment:
Q  104 cccaaaccacgtaagcctattttccaccatcttttctactatcggtg 150  Q
    |||||||||| |||||||| |||||||||||||||||||||| ||||    
T  43475293 cccaaaccacctaagcctagtttccaccatcttttctactataggtg 43475247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 101 - 158
Target Start/End: Complemental strand, 1275320 - 1275263
Alignment:
Q  101 atgcccaaaccacgtaagcctattttccaccatcttttctactatcggtgttacccca 158  Q
    ||||||||||||  ||||||||||||| |||| |||||||||||| |||| |||||||    
T  1275320 atgcccaaaccatctaagcctattttctaccaacttttctactataggtgctacccca 1275263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 101 - 162
Target Start/End: Original strand, 1287805 - 1287866
Alignment:
Q  101 atgcccaaaccacgtaagcctattttccaccatcttttctactatcggtgttaccccaactc 162  Q
    ||||||||||||  ||||||||||||| |||| |||||||||||| |||| |||||| ||||    
T  1287805 atgcccaaaccatctaagcctattttctaccaacttttctactataggtgctacccccactc 1287866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 101 - 162
Target Start/End: Complemental strand, 4496440 - 4496379
Alignment:
Q  101 atgcccaaaccacgtaagcctattttccaccatcttttctactatcggtgttaccccaactc 162  Q
    ||||||||||||  ||||||||||||| |||| |||||||||||| |||| |||||| ||||    
T  4496440 atgcccaaaccatctaagcctattttctaccagcttttctactataggtgctacccccactc 4496379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 105 - 162
Target Start/End: Complemental strand, 6889045 - 6888988
Alignment:
Q  105 ccaaaccacgtaagcctattttccaccatcttttctactatcggtgttaccccaactc 162  Q
    ||||||||| |||||||||||||||||||||||||  ||||  ||| |||||||||||    
T  6889045 ccaaaccacttaagcctattttccaccatcttttcctctatacgtgctaccccaactc 6888988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 101 - 162
Target Start/End: Complemental strand, 24178566 - 24178505
Alignment:
Q  101 atgcccaaaccacgtaagcctattttccaccatcttttctactatcggtgttaccccaactc 162  Q
    ||||||||||||  ||||||||||||| |||| |||||||||||| |||| |||||| ||||    
T  24178566 atgcccaaaccatctaagcctattttctaccaacttttctactataggtgctacccccactc 24178505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 101 - 162
Target Start/End: Complemental strand, 28676651 - 28676590
Alignment:
Q  101 atgcccaaaccacgtaagcctattttccaccatcttttctactatcggtgttaccccaactc 162  Q
    ||||| ||||||| |||| |||||||||||||||||||||||||| | || ||||| |||||    
T  28676651 atgccgaaaccacctaagactattttccaccatcttttctactatagctgctacccgaactc 28676590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 104 - 161
Target Start/End: Original strand, 38341646 - 38341703
Alignment:
Q  104 cccaaaccacgtaagcctattttccaccatcttttctactatcggtgttaccccaact 161  Q
    |||||||||| ||||||||||||||||  ||||||||||||| | || ||||||||||    
T  38341646 cccaaaccacctaagcctattttccactgtcttttctactatagctgctaccccaact 38341703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 105 - 157
Target Start/End: Complemental strand, 15168844 - 15168792
Alignment:
Q  105 ccaaaccacgtaagcctattttccaccatcttttctactatcggtgttacccc 157  Q
    ||||||||| | ||||||||||| ||||||||||||||||| |||| ||||||    
T  15168844 ccaaaccaccttagcctattttctaccatcttttctactataggtgctacccc 15168792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 101 - 141
Target Start/End: Complemental strand, 30588505 - 30588465
Alignment:
Q  101 atgcccaaaccacgtaagcctattttccaccatcttttcta 141  Q
    ||||||||||||| ||| |||||||||||||||||||||||    
T  30588505 atgcccaaaccacttaaacctattttccaccatcttttcta 30588465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 101 - 144
Target Start/End: Complemental strand, 42199342 - 42199299
Alignment:
Q  101 atgcccaaaccacgtaagcctattttccaccatcttttctacta 144  Q
    ||||||||||||| |||| ||| |||||||||||||||||||||    
T  42199342 atgcccaaaccacctaagtctagtttccaccatcttttctacta 42199299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 101 - 159
Target Start/End: Original strand, 10082965 - 10083023
Alignment:
Q  101 atgcccaaaccacgtaagcctattttccaccatcttttctactatcggtgttaccccaa 159  Q
    ||||| ||||||| |||| ||| |||| ||||||||||||||||| |||| ||||||||    
T  10082965 atgccgaaaccacttaagtctagtttctaccatcttttctactataggtgataccccaa 10083023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 107 - 141
Target Start/End: Complemental strand, 29938165 - 29938131
Alignment:
Q  107 aaaccacgtaagcctattttccaccatcttttcta 141  Q
    ||||||| |||||||||||||||||||||||||||    
T  29938165 aaaccacctaagcctattttccaccatcttttcta 29938131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 101 - 162
Target Start/End: Original strand, 2075700 - 2075761
Alignment:
Q  101 atgcccaaaccacgtaagcctattttccaccatcttttctactatcggtgttaccccaactc 162  Q
    ||||||||||||  |||||||||| || |||| |||||||||| | ||||||||||| ||||    
T  2075700 atgcccaaaccatctaagcctattgtctaccaacttttctactgtaggtgttacccccactc 2075761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 105 - 162
Target Start/End: Original strand, 4026565 - 4026622
Alignment:
Q  105 ccaaaccacgtaagcctattttccaccatcttttctactatcggtgttaccccaactc 162  Q
    ||||||||| |||| ||| ||||||||||||||| |||| |  |||||||||||||||    
T  4026565 ccaaaccacctaagactagtttccaccatcttttttactttacgtgttaccccaactc 4026622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 104 - 161
Target Start/End: Original strand, 15588769 - 15588826
Alignment:
Q  104 cccaaaccacgtaagcctattttccaccatcttttctactatcggtgttaccccaact 161  Q
    |||||| ||| |||||||| ||||||||||||||||| |||| |||  ||||||||||    
T  15588769 cccaaatcacctaagcctagtttccaccatcttttcttctataggtactaccccaact 15588826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 101 - 162
Target Start/End: Original strand, 28977085 - 28977146
Alignment:
Q  101 atgcccaaaccacgtaagcctattttccaccatcttttctactatcggtgttaccccaactc 162  Q
    |||| |||||||  ||||||||||||| |||| |||||||||||| |||| |||||| ||||    
T  28977085 atgcacaaaccatctaagcctattttctaccaacttttctactataggtgctacccccactc 28977146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 101 - 162
Target Start/End: Complemental strand, 34273083 - 34273022
Alignment:
Q  101 atgcccaaaccacgtaagcctattttccaccatcttttctactatcggtgttaccccaactc 162  Q
    ||||||||||||  ||||||||||||| |||| |||||||| ||| |||| |||||| ||||    
T  34273083 atgcccaaaccatctaagcctattttctaccaacttttctattataggtgctacccccactc 34273022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 105 - 162
Target Start/End: Complemental strand, 38685019 - 38684962
Alignment:
Q  105 ccaaaccacgtaagcctattttccaccatcttttctactatcggtgttaccccaactc 162  Q
    ||||||||  ||||||||||||| |||| |||||||||||| |||| |||||| ||||    
T  38685019 ccaaaccatctaagcctattttctaccaacttttctactataggtgctacccccactc 38684962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 101 - 162
Target Start/End: Original strand, 43558053 - 43558114
Alignment:
Q  101 atgcccaaaccacgtaagcctattttccaccatcttttctactatcggtgttaccccaactc 162  Q
    ||||||||||||| ||||| || |||||||||||||||||| ||| | || ||||| |||||    
T  43558053 atgcccaaaccacctaagcttagtttccaccatcttttctattatagatgctaccctaactc 43558114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 145
Target Start/End: Original strand, 12492610 - 12492654
Alignment:
Q  101 atgcccaaaccacgtaagcctattttccaccatcttttctactat 145  Q
    ||||||||||||  ||||||||||||| |||| ||||||||||||    
T  12492610 atgcccaaaccatctaagcctattttctaccaacttttctactat 12492654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 144
Target Start/End: Original strand, 12577077 - 12577117
Alignment:
Q  104 cccaaaccacgtaagcctattttccaccatcttttctacta 144  Q
    |||||||||| |||| ||| |||||||||||||||||||||    
T  12577077 cccaaaccacataagtctagtttccaccatcttttctacta 12577117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 157
Target Start/End: Original strand, 16347608 - 16347660
Alignment:
Q  105 ccaaaccacgtaagcctattttccaccatcttttctactatcggtgttacccc 157  Q
    ||||||||  ||||||||||||| |||| |||||||||||| |||| ||||||    
T  16347608 ccaaaccatctaagcctattttctaccaacttttctactataggtgctacccc 16347660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 106 - 162
Target Start/End: Complemental strand, 27249271 - 27249215
Alignment:
Q  106 caaaccacgtaagcctattttccaccatcttttctactatcggtgttaccccaactc 162  Q
    |||||||| |||||||| |||||||  ||||||||||||| |||| ||| |||||||    
T  27249271 caaaccacctaagcctaatttccactttcttttctactatgggtgctactccaactc 27249215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 141
Target Start/End: Original strand, 41833808 - 41833848
Alignment:
Q  101 atgcccaaaccacgtaagcctattttccaccatcttttcta 141  Q
    ||||||||||||| ||||| ||| |||||||||||||||||    
T  41833808 atgcccaaaccacctaagcatatgttccaccatcttttcta 41833848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 26)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 101 - 162
Target Start/End: Original strand, 13171875 - 13171936
Alignment:
Q  101 atgcccaaaccacgtaagcctattttccaccatcttttctactatcggtgttaccccaactc 162  Q
    ||||||||||||| ||||| ||||||||||||||||||||||||| |||| | |||||||||    
T  13171875 atgcccaaaccacctaagcatattttccaccatcttttctactataggtgcttccccaactc 13171936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 105 - 162
Target Start/End: Original strand, 42493536 - 42493593
Alignment:
Q  105 ccaaaccacgtaagcctattttccaccatcttttctactatcggtgttaccccaactc 162  Q
    ||||||||| |||||||| ||||||| |||||||||||||| ||||||||||||||||    
T  42493536 ccaaaccacctaagcctagtttccacaatcttttctactataggtgttaccccaactc 42493593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 43 - 162
Target Start/End: Complemental strand, 36545262 - 36545144
Alignment:
Q  43 actatcctccatctgatttacttttcttactactgaacccacgggtatctctatgtaaatgcccaaaccacgtaagcctattttccaccatcttttctac 142  Q
    |||||||||||| |||| |||| ||||||| || | | | |||||| | ||| | || ||||||||||||  ||||||||||||| |||| |||||||||    
T  36545262 actatcctccatttgatctactcttcttaccacggcatctacgggtct-tctctctacatgcccaaaccatctaagcctattttctaccaacttttctac 36545164  T
Q  143 tatcggtgttaccccaactc 162  Q
    ||| ||||||||||| ||||    
T  36545163 tataggtgttacccccactc 36545144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 101 - 159
Target Start/End: Complemental strand, 9695687 - 9695629
Alignment:
Q  101 atgcccaaaccacgtaagcctattttccaccatcttttctactatcggtgttaccccaa 159  Q
    ||||||||||||| |||||| | |||||||||||||||||||||| |||| ||||||||    
T  9695687 atgcccaaaccacctaagccgagtttccaccatcttttctactataggtgctaccccaa 9695629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 101 - 162
Target Start/End: Complemental strand, 29700332 - 29700271
Alignment:
Q  101 atgcccaaaccacgtaagcctattttccaccatcttttctactatcggtgttaccccaactc 162  Q
    ||||||||||||| |||||| | ||||| |||||||||||||||| |||| |||||||||||    
T  29700332 atgcccaaaccacctaagccaactttcctccatcttttctactataggtgctaccccaactc 29700271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 101 - 162
Target Start/End: Original strand, 45512721 - 45512782
Alignment:
Q  101 atgcccaaaccacgtaagcctattttccaccatcttttctactatcggtgttaccccaactc 162  Q
    ||||||||||||  ||||| ||||||||| ||||||||||||||| |||| |||||||||||    
T  45512721 atgcccaaaccatctaagcttattttccatcatcttttctactataggtgctaccccaactc 45512782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 101 - 161
Target Start/End: Complemental strand, 16917240 - 16917180
Alignment:
Q  101 atgcccaaaccacgtaagcctattttccaccatcttttctactatcggtgttaccccaact 161  Q
    ||||||||||||| |||||||| ||| |||||||||||||||| |||||  ||||||||||    
T  16917240 atgcccaaaccacctaagcctagtttgcaccatcttttctactttcggtactaccccaact 16917180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 101 - 145
Target Start/End: Original strand, 35643827 - 35643871
Alignment:
Q  101 atgcccaaaccacgtaagcctattttccaccatcttttctactat 145  Q
    ||||||||||||| ||||| |||||||||||||||||||||||||    
T  35643827 atgcccaaaccacctaagcatattttccaccatcttttctactat 35643871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 105 - 161
Target Start/End: Original strand, 41444556 - 41444612
Alignment:
Q  105 ccaaaccacgtaagcctattttccaccatcttttctactatcggtgttaccccaact 161  Q
    ||||||||| ||| |||| |||||||||||||||||||||| |||| ||||||||||    
T  41444556 ccaaaccacctaaacctagtttccaccatcttttctactataggtgctaccccaact 41444612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 101 - 159
Target Start/End: Complemental strand, 45419293 - 45419235
Alignment:
Q  101 atgcccaaaccacgtaagcctattttccaccatcttttctactatcggtgttaccccaa 159  Q
    ||||||||||||| |||| |||||||  ||||||||||||||||| |||| ||||||||    
T  45419293 atgcccaaaccacctaagtctattttataccatcttttctactataggtgctaccccaa 45419235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 98 - 143
Target Start/End: Original strand, 10824387 - 10824432
Alignment:
Q  98 taaatgcccaaaccacgtaagcctattttccaccatcttttctact 143  Q
    ||||| |||||||||| ||||||||||||| |||||||||||||||    
T  10824387 taaatacccaaaccacctaagcctattttcgaccatcttttctact 10824432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 101 - 162
Target Start/End: Original strand, 30113423 - 30113484
Alignment:
Q  101 atgcccaaaccacgtaagcctattttccaccatcttttctactatcggtgttaccccaactc 162  Q
    ||||||||||||  ||| ||||||||| |||||||||||||||||  |||||||||| ||||    
T  30113423 atgcccaaaccaattaaacctattttctaccatcttttctactatatgtgttaccccgactc 30113484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 98 - 155
Target Start/End: Complemental strand, 36143424 - 36143367
Alignment:
Q  98 taaatgcccaaaccacgtaagcctattttccaccatcttttctactatcggtgttacc 155  Q
    |||||||||||||||| |||| |||||||||||||||| |||| |||| |||| ||||    
T  36143424 taaatgcccaaaccacctaagtctattttccaccatctattctgctataggtgctacc 36143367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 101 - 162
Target Start/End: Original strand, 36565467 - 36565528
Alignment:
Q  101 atgcccaaaccacgtaagcctattttccaccatcttttctactatcggtgttaccccaactc 162  Q
    ||||||||||||  ||||||||||||| |||| |||||||||||| |||| |||||| ||||    
T  36565467 atgcccaaaccatctaagcctattttctaccaacttttctactataggtgctacccccactc 36565528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 101 - 162
Target Start/End: Complemental strand, 44373832 - 44373771
Alignment:
Q  101 atgcccaaaccacgtaagcctattttccaccatcttttctactatcggtgttaccccaactc 162  Q
    |||| ||||||||  |||||||||||||||||||||||||||| | |||| ||| |||||||    
T  44373832 atgctcaaaccactcaagcctattttccaccatcttttctactttaggtgctactccaactc 44373771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 101 - 155
Target Start/End: Original strand, 12491364 - 12491418
Alignment:
Q  101 atgcccaaaccacgtaagcctattttccaccatcttttctactatcggtgttacc 155  Q
    ||||||||||||  ||||||||||||| |||| |||||||||||| |||| ||||    
T  12491364 atgcccaaaccatctaagcctattttctaccaacttttctactataggtgctacc 12491418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 106 - 143
Target Start/End: Original strand, 2518623 - 2518660
Alignment:
Q  106 caaaccacgtaagcctattttccaccatcttttctact 143  Q
    |||||||| ||| |||||||||||||||||||||||||    
T  2518623 caaaccacctaaacctattttccaccatcttttctact 2518660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 101 - 162
Target Start/End: Complemental strand, 2796613 - 2796552
Alignment:
Q  101 atgcccaaaccacgtaagcctattttccaccatcttttctactatcggtgttaccccaactc 162  Q
    ||||||||||||  ||||||||||||| |||| |||||||||||| || | |||||| ||||    
T  2796613 atgcccaaaccatctaagcctattttctaccaacttttctactataggcgctacccccactc 2796552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 106 - 143
Target Start/End: Complemental strand, 12611586 - 12611549
Alignment:
Q  106 caaaccacgtaagcctattttccaccatcttttctact 143  Q
    |||||||| |||||||| ||||||||||||||||||||    
T  12611586 caaaccacctaagcctagtttccaccatcttttctact 12611549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 101 - 162
Target Start/End: Complemental strand, 25985575 - 25985514
Alignment:
Q  101 atgcccaaaccacgtaagcctattttccaccatcttttctactatcggtgttaccccaactc 162  Q
    ||||| ||| |||| ||| ||| |||| ||||||||||||||||| |||| |||||||||||    
T  25985575 atgccaaaatcacgcaagtctagtttctaccatcttttctactataggtgctaccccaactc 25985514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 105 - 162
Target Start/End: Complemental strand, 39946909 - 39946852
Alignment:
Q  105 ccaaaccacgtaagcctattttccaccatcttttctactatcggtgttaccccaactc 162  Q
    ||||||||  ||||||||||||| |||| |||||||||||| |||| |||||| ||||    
T  39946909 ccaaaccatctaagcctattttctaccaacttttctactataggtgctacccccactc 39946852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 101 - 162
Target Start/End: Complemental strand, 40813380 - 40813319
Alignment:
Q  101 atgcccaaaccacgtaagcctattttccaccatcttttctactatcggtgttaccccaactc 162  Q
    ||||||||||||  ||| ||||||||| |||| |||||||||||| |||| |||||| ||||    
T  40813380 atgcccaaaccatctaaacctattttctaccaacttttctactataggtgctacccccactc 40813319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 105 - 162
Target Start/End: Original strand, 41972008 - 41972064
Alignment:
Q  105 ccaaaccacgtaagcctattttccaccatcttttctactatcggtgttaccccaactc 162  Q
    ||||||||| ||| | ||||||||||||||||||||||| | |||||||||| |||||    
T  41972008 ccaaaccacctaaacttattttccaccatcttttctact-taggtgttaccctaactc 41972064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 145
Target Start/End: Complemental strand, 6483313 - 6483269
Alignment:
Q  101 atgcccaaaccacgtaagcctattttccaccatcttttctactat 145  Q
    ||||||||||||| |||||| | |||||||| |||||||||||||    
T  6483313 atgcccaaaccacctaagccaagtttccaccctcttttctactat 6483269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 106 - 162
Target Start/End: Complemental strand, 18125224 - 18125168
Alignment:
Q  106 caaaccacgtaagcctattttccaccatcttttctactatcggtgttaccccaactc 162  Q
    |||||||  ||||||||||||| |||| |||||||||||| |||| |||||| ||||    
T  18125224 caaaccatctaagcctattttctaccaacttttctactataggtgctacccccactc 18125168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 106 - 162
Target Start/End: Complemental strand, 33511407 - 33511351
Alignment:
Q  106 caaaccacgtaagcctattttccaccatcttttctactatcggtgttaccccaactc 162  Q
    |||||||| |||| ||||||| || ||| |||||||| || ||||||||||||||||    
T  33511407 caaaccacctaagtctatttttcatcattttttctaccataggtgttaccccaactc 33511351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 101 - 162
Target Start/End: Original strand, 9593932 - 9593993
Alignment:
Q  101 atgcccaaaccacgtaagcctattttccaccatcttttctactatcggtgttaccccaactc 162  Q
    ||||||||||||| ||||||||||||| ||||||||||||||||  |||| |||||||||||    
T  9593932 atgcccaaaccacctaagcctattttctaccatcttttctactaatggtgctaccccaactc 9593993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 101 - 162
Target Start/End: Complemental strand, 12890640 - 12890579
Alignment:
Q  101 atgcccaaaccacgtaagcctattttccaccatcttttctactatcggtgttaccccaactc 162  Q
    |||||||||||| |||||||||||||| |||| |||||||||||| |||| |||||| ||||    
T  12890640 atgcccaaaccatgtaagcctattttctaccaacttttctactataggtgctacccccactc 12890579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 105 - 145
Target Start/End: Complemental strand, 5897521 - 5897481
Alignment:
Q  105 ccaaaccacgtaagcctattttccaccatcttttctactat 145  Q
    ||||||||| |||||||||||||||||||||||||||||||    
T  5897521 ccaaaccacttaagcctattttccaccatcttttctactat 5897481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 98 - 162
Target Start/End: Original strand, 21870296 - 21870360
Alignment:
Q  98 taaatgcccaaaccacgtaagcctattttccaccatcttttctactatcggtgttaccccaactc 162  Q
    |||||||||||||||| |||||| | |||| ||||||||||||||||  |||| |||||||||||    
T  21870296 taaatgcccaaaccacctaagccgagtttctaccatcttttctactacaggtgctaccccaactc 21870360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 102 - 145
Target Start/End: Original strand, 12134128 - 12134171
Alignment:
Q  102 tgcccaaaccacgtaagcctattttccaccatcttttctactat 145  Q
    |||| ||||| |||||||||||||||||||||||||||||||||    
T  12134128 tgccgaaaccccgtaagcctattttccaccatcttttctactat 12134171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 107 - 145
Target Start/End: Complemental strand, 2079390 - 2079352
Alignment:
Q  107 aaaccacgtaagcctattttccaccatcttttctactat 145  Q
    ||||||| |||||||||||||||||||||||||||||||    
T  2079390 aaaccacttaagcctattttccaccatcttttctactat 2079352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 101 - 145
Target Start/End: Complemental strand, 8364628 - 8364584
Alignment:
Q  101 atgcccaaaccacgtaagcctattttccaccatcttttctactat 145  Q
    ||||||||||||| ||||||||||||| |||| ||||||||||||    
T  8364628 atgcccaaaccacctaagcctattttcaaccaccttttctactat 8364584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 103 - 162
Target Start/End: Original strand, 4948539 - 4948598
Alignment:
Q  103 gcccaaaccacgtaagcctattttccaccatcttttctactatcggtgttaccccaactc 162  Q
    ||||||||||| |||||| | ||||||||||||||||||| || |||| ||| |||||||    
T  4948539 gcccaaaccacctaagccgaatttccaccatcttttctacgatgggtgatactccaactc 4948598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 103 - 162
Target Start/End: Original strand, 4955510 - 4955569
Alignment:
Q  103 gcccaaaccacgtaagcctattttccaccatcttttctactatcggtgttaccccaactc 162  Q
    ||||||||||| |||||| | ||||||||||||||||||| || |||| ||| |||||||    
T  4955510 gcccaaaccacctaagccgaatttccaccatcttttctacgatgggtgatactccaactc 4955569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 47 - 162
Target Start/End: Original strand, 5258321 - 5258435
Alignment:
Q  47 tcctccatctgatttacttttcttactactgaacccacgggtatctctatgtaaatgcccaaaccacgtaagcctattttccaccatcttttctactatc 146  Q
    |||||||| |||| |||| ||||||| || ||| | |||||| | ||| | || ||| ||||||||  ||||||||||||| |||| ||||||||||||     
T  5258321 tcctccatttgatctactcttcttacaacggaatctacgggtct-tctctctacatgtccaaaccatctaagcctattttctaccaacttttctactata 5258419  T
Q  147 ggtgttaccccaactc 162  Q
    |||| |||||| ||||    
T  5258420 ggtgctacccccactc 5258435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 104 - 162
Target Start/End: Complemental strand, 33084111 - 33084053
Alignment:
Q  104 cccaaaccacgtaagcctattttccaccatcttttctactatcggtgttaccccaactc 162  Q
    |||||||||| |||| ||| |||| |||||||||||||| || |||| |||||||||||    
T  33084111 cccaaaccacctaagtctagtttctaccatcttttctaccataggtgctaccccaactc 33084053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 105 - 162
Target Start/End: Complemental strand, 5631874 - 5631817
Alignment:
Q  105 ccaaaccacgtaagcctattttccaccatcttttctactatcggtgttaccccaactc 162  Q
    ||||||||  ||||| ||||||| |||| |||||||||||| ||||||||||| ||||    
T  5631874 ccaaaccatctaagcatattttctaccaacttttctactataggtgttacccccactc 5631817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 101 - 162
Target Start/End: Original strand, 6641635 - 6641696
Alignment:
Q  101 atgcccaaaccacgtaagcctattttccaccatcttttctactatcggtgttaccccaactc 162  Q
    |||||||||| ||  ||| ||| |||| ||||||||||||||||| |||| |||||||||||    
T  6641635 atgcccaaacaacccaagtctagtttctaccatcttttctactataggtgataccccaactc 6641696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 105 - 162
Target Start/End: Complemental strand, 28085428 - 28085371
Alignment:
Q  105 ccaaaccacgtaagcctattttccaccatcttttctactatcggtgttaccccaactc 162  Q
    ||||||||  ||||||||||||| |||| |||||||||||| |||| |||||| ||||    
T  28085428 ccaaaccatctaagcctattttctaccaacttttctactataggtgctacccccactc 28085371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 105 - 162
Target Start/End: Complemental strand, 32755973 - 32755916
Alignment:
Q  105 ccaaaccacgtaagcctattttccaccatcttttctactatcggtgttaccccaactc 162  Q
    ||||||||  ||||||||||||| |||| |||||||||||| |||| |||||| ||||    
T  32755973 ccaaaccatctaagcctattttctaccaacttttctactataggtgctacccccactc 32755916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 106 - 162
Target Start/End: Original strand, 20427867 - 20427923
Alignment:
Q  106 caaaccacgtaagcctattttccaccatcttttctactatcggtgttaccccaactc 162  Q
    |||||||  ||||||||||||| |||| |||||||||||| |||| |||||| ||||    
T  20427867 caaaccatctaagcctattttctaccaacttttctactataggtgctacccccactc 20427923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 145
Target Start/End: Complemental strand, 24665862 - 24665822
Alignment:
Q  105 ccaaaccacgtaagcctattttccaccatcttttctactat 145  Q
    ||||||||| ||||||||||||| ||||| |||||||||||    
T  24665862 ccaaaccacctaagcctattttctaccatattttctactat 24665822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 38)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 101 - 162
Target Start/End: Complemental strand, 33709980 - 33709919
Alignment:
Q  101 atgcccaaaccacgtaagcctattttccaccatcttttctactatcggtgttaccccaactc 162  Q
    ||||| ||||||| ||| |||| |||||||||||||||||||||| ||||||||||||||||    
T  33709980 atgcctaaaccacctaaacctagtttccaccatcttttctactataggtgttaccccaactc 33709919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 101 - 162
Target Start/End: Complemental strand, 54470263 - 54470202
Alignment:
Q  101 atgcccaaaccacgtaagcctattttccaccatcttttctactatcggtgttaccccaactc 162  Q
    ||||||||||||| |||| ||| |||||||||||||||||||||| |||| |||||||||||    
T  54470263 atgcccaaaccacttaagtctagtttccaccatcttttctactataggtgctaccccaactc 54470202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 105 - 156
Target Start/End: Complemental strand, 49987480 - 49987429
Alignment:
Q  105 ccaaaccacgtaagcctattttccaccatcttttctactatcggtgttaccc 156  Q
    ||||||||| ||||||||||||||||||||||||||||||| ||||| ||||    
T  49987480 ccaaaccacctaagcctattttccaccatcttttctactataggtgtgaccc 49987429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 101 - 155
Target Start/End: Complemental strand, 31459086 - 31459032
Alignment:
Q  101 atgcccaaaccacgtaagcctattttccaccatcttttctactatcggtgttacc 155  Q
    ||||||||||||| ||||||||||||| ||||||||||||||||| |||| ||||    
T  31459086 atgcccaaaccacctaagcctattttctaccatcttttctactataggtgctacc 31459032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 101 - 162
Target Start/End: Complemental strand, 28236239 - 28236178
Alignment:
Q  101 atgcccaaaccacgtaagcctattttccaccatcttttctactatcggtgttaccccaactc 162  Q
    ||||||||||||  |||||||||||||||||| |||||||||||| |||| |||||| ||||    
T  28236239 atgcccaaaccatctaagcctattttccaccaacttttctactataggtgctacccccactc 28236178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 101 - 162
Target Start/End: Original strand, 51252687 - 51252748
Alignment:
Q  101 atgcccaaaccacgtaagcctattttccaccatcttttctactatcggtgttaccccaactc 162  Q
    ||||||| ||||| |||||||| |||||||||||||||||||||  |||| |||||||||||    
T  51252687 atgcccataccacctaagcctagtttccaccatcttttctactagaggtgctaccccaactc 51252748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 102 - 162
Target Start/End: Original strand, 30621431 - 30621491
Alignment:
Q  102 tgcccaaaccacgtaagcctattttccaccatcttttctactatcggtgttaccccaactc 162  Q
    |||||||| ||| ||| |||||||||||||||||||||||||||  ||| |||||||||||    
T  30621431 tgcccaaatcacctaaacctattttccaccatcttttctactataagtgctaccccaactc 30621491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 98 - 162
Target Start/End: Original strand, 35555870 - 35555934
Alignment:
Q  98 taaatgcccaaaccacgtaagcctattttccaccatcttttctactatcggtgttaccccaactc 162  Q
    |||||||||||||||| |||| ||| |||| ||||||||||||||||| |||| ||||| |||||    
T  35555870 taaatgcccaaaccacctaagtctagtttctaccatcttttctactataggtgctacccgaactc 35555934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 47 - 162
Target Start/End: Complemental strand, 43434033 - 43433919
Alignment:
Q  47 tcctccatctgatttacttttcttactactgaacccacgggtatctctatgtaaatgcccaaaccacgtaagcctattttccaccatcttttctactatc 146  Q
    |||||||| ||||||||| ||||||| || | | | |||||| | ||| | || ||||||||||||  ||||||||||||| |||| ||||||||||||     
T  43434033 tcctccatttgatttactcttcttaccacggcatctacgggtct-tctctctacatgcccaaaccatctaagcctattttctaccaacttttctactata 43433935  T
Q  147 ggtgttaccccaactc 162  Q
    |||| |||||| ||||    
T  43433934 ggtgctacccccactc 43433919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 107 - 162
Target Start/End: Complemental strand, 50662437 - 50662382
Alignment:
Q  107 aaaccacgtaagcctattttccaccatcttttctactatcggtgttaccccaactc 162  Q
    ||||||| |||||||| |||||||||||||||||||||| |||||| ||| |||||    
T  50662437 aaaccacctaagcctactttccaccatcttttctactataggtgttgcccaaactc 50662382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 107 - 162
Target Start/End: Complemental strand, 50680789 - 50680734
Alignment:
Q  107 aaaccacgtaagcctattttccaccatcttttctactatcggtgttaccccaactc 162  Q
    ||||||| ||||||||||||||||||||||||| ||||| |||||| ||| |||||    
T  50680789 aaaccacctaagcctattttccaccatcttttcaactataggtgttgccctaactc 50680734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 101 - 143
Target Start/End: Complemental strand, 47611783 - 47611741
Alignment:
Q  101 atgcccaaaccacgtaagcctattttccaccatcttttctact 143  Q
    ||||||||||||| ||||||||||||||| |||||||||||||    
T  47611783 atgcccaaaccacctaagcctattttccatcatcttttctact 47611741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 102 - 151
Target Start/End: Complemental strand, 26356674 - 26356625
Alignment:
Q  102 tgcccaaaccacgtaagcctattttccaccatcttttctactatcggtgt 151  Q
    |||||||||||| |||| |||||||| ||||||||||||||||| |||||    
T  26356674 tgcccaaaccacctaagtctattttctaccatcttttctactataggtgt 26356625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 101 - 162
Target Start/End: Complemental strand, 28497545 - 28497485
Alignment:
Q  101 atgcccaaaccacgtaagcctattttccaccatcttttctactatcggtgttaccccaactc 162  Q
    ||||||||||||| ||||||| |||||||| |||||||||||||  |||| |||||||||||    
T  28497545 atgcccaaaccacctaagcct-ttttccacaatcttttctactaaaggtgctaccccaactc 28497485  T

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Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 101 - 142
Target Start/End: Complemental strand, 29398874 - 29398833
Alignment:
Q  101 atgcccaaaccacgtaagcctattttccaccatcttttctac 142  Q
    ||||||||||||| ||||| ||||||||||||||||||||||    
T  29398874 atgcccaaaccacataagcatattttccaccatcttttctac 29398833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 101 - 162
Target Start/End: Original strand, 31960040 - 31960101
Alignment:
Q  101 atgcccaaaccacgtaagcctattttccaccatcttttctactatcggtgttaccccaactc 162  Q
    ||||||||||||  ||||||||||||| |||| |||||||||||| |||| |||||| ||||    
T  31960040 atgcccaaaccatctaagcctattttctaccaacttttctactataggtgctacccccactc 31960101  T

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Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 101 - 162
Target Start/End: Original strand, 48174319 - 48174380
Alignment:
Q  101 atgcccaaaccacgtaagcctattttccaccatcttttctactatcggtgttaccccaactc 162  Q
    ||||||||| ||  ||||||||||||| |||| |||||||||||| ||||||||||| ||||    
T  48174319 atgcccaaatcatctaagcctattttctaccaacttttctactataggtgttacccccactc 48174380  T

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Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 101 - 162
Target Start/End: Original strand, 48622769 - 48622830
Alignment:
Q  101 atgcccaaaccacgtaagcctattttccaccatcttttctactatcggtgttaccccaactc 162  Q
    ||||||||||||  ||||||||||||| |||| |||||||||||| |||| |||||| ||||    
T  48622769 atgcccaaaccatctaagcctattttctaccaacttttctactatgggtgctacccccactc 48622830  T

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Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 101 - 162
Target Start/End: Original strand, 52569741 - 52569802
Alignment:
Q  101 atgcccaaaccacgtaagcctattttccaccatcttttctactatcggtgttaccccaactc 162  Q
    ||||||||||||  ||||||||||||| |||| |||||||||||| |||| |||||| ||||    
T  52569741 atgcccaaaccatctaagcctattttctaccaacttttctactataggtgctacccccactc 52569802  T

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Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 101 - 145
Target Start/End: Complemental strand, 50471582 - 50471538
Alignment:
Q  101 atgcccaaaccacgtaagcctattttccaccatcttttctactat 145  Q
    ||||||||||||| ||| |||| ||||||||||||||||||||||    
T  50471582 atgcccaaaccacttaaacctagtttccaccatcttttctactat 50471538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 43 - 155
Target Start/End: Complemental strand, 53707907 - 53707796
Alignment:
Q  43 actatcctccatctgatttacttttcttactactgaacccacgggtatctctatgtaaatgcccaaaccacgtaagcctattttccaccatcttttctac 142  Q
    |||||||||||| |||| |||| ||||||| || | | | |||||| | ||| | || ||||||||||||  ||||||||||||| |||| |||||||||    
T  53707907 actatcctccatttgatatactcttcttaccacggcatctacgggtct-tctctctacatgcccaaaccatctaagcctattttctaccaacttttctac 53707809  T
Q  143 tatcggtgttacc 155  Q
    ||| |||| ||||    
T  53707808 tataggtgctacc 53707796  T

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Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 106 - 161
Target Start/End: Complemental strand, 56225117 - 56225062
Alignment:
Q  106 caaaccacgtaagcctattttccaccatcttttctactatcggtgttaccccaact 161  Q
    |||||||| ||||||||||||| |||||||||| |||||| ||| ||| |||||||    
T  56225117 caaaccacctaagcctattttctaccatcttttatactataggtattatcccaact 56225062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 108 - 162
Target Start/End: Original strand, 31403250 - 31403303
Alignment:
Q  108 aaccacgtaagcctattttccaccatcttttctactatcggtgttaccccaactc 162  Q
    |||||| |||||||| |||||||||| ||||||||||| |||| |||||||||||    
T  31403250 aaccacctaagcctagtttccaccat-ttttctactataggtgctaccccaactc 31403303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 104 - 162
Target Start/End: Original strand, 42293478 - 42293536
Alignment:
Q  104 cccaaaccacgtaagcctattttccaccatcttttctactatcggtgttaccccaactc 162  Q
    |||||||||| |||||| | |||||| ||||||||||||||| |||| ||| |||||||    
T  42293478 cccaaaccacctaagccgagtttccatcatcttttctactataggtgctacgccaactc 42293536  T

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Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 101 - 143
Target Start/End: Original strand, 45185253 - 45185295
Alignment:
Q  101 atgcccaaaccacgtaagcctattttccaccatcttttctact 143  Q
    ||||||||| ||| |||||||||| ||||||||||||||||||    
T  45185253 atgcccaaatcacctaagcctattatccaccatcttttctact 45185295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 101 - 162
Target Start/End: Complemental strand, 436285 - 436224
Alignment:
Q  101 atgcccaaaccacgtaagcctattttccaccatcttttctactatcggtgttaccccaactc 162  Q
    ||||||||| ||  ||||||||||||| |||| |||||||||||| |||| |||||| ||||    
T  436285 atgcccaaatcatctaagcctattttctaccaacttttctactataggtgctacccccactc 436224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 101 - 150
Target Start/End: Complemental strand, 4440909 - 4440860
Alignment:
Q  101 atgcccaaaccacgtaagcctattttccaccatcttttctactatcggtg 150  Q
    ||||||||||||  ||||||||||||| |||| |||||||||||| ||||    
T  4440909 atgcccaaaccatctaagcctattttctaccaacttttctactataggtg 4440860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 107 - 160
Target Start/End: Original strand, 10775654 - 10775707
Alignment:
Q  107 aaaccacgtaagcctattttccaccatcttttctactatcggtgttaccccaac 160  Q
    ||||||| || | ||| |||| ||||||||||||||||| ||||||||||||||    
T  10775654 aaaccacctatgtctagtttctaccatcttttctactataggtgttaccccaac 10775707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 101 - 162
Target Start/End: Complemental strand, 33227265 - 33227204
Alignment:
Q  101 atgcccaaaccacgtaagcctattttccaccatcttttctactatcggtgttaccccaactc 162  Q
    |||||||||| |  ||||||||||||| |||| |||||||||||| |||| |||||| ||||    
T  33227265 atgcccaaacaatctaagcctattttctaccaacttttctactataggtgctacccccactc 33227204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 92 - 157
Target Start/End: Original strand, 37773668 - 37773733
Alignment:
Q  92 tctatgtaaatgcccaaaccacgtaagcctattttccaccatcttttctactatcggtgttacccc 157  Q
    ||||| || ||||||||||||  ||||||||||||| |||  |||||||||||| |||| ||||||    
T  37773668 tctatctacatgcccaaaccatctaagcctattttctaccgacttttctactataggtgctacccc 37773733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 101 - 150
Target Start/End: Original strand, 38570973 - 38571022
Alignment:
Q  101 atgcccaaaccacgtaagcctattttccaccatcttttctactatcggtg 150  Q
    ||||||||||||| |||||||| ||||||| ||||||| |||||| ||||    
T  38570973 atgcccaaaccacctaagcctagtttccactatcttttgtactataggtg 38571022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 101 - 162
Target Start/End: Complemental strand, 41192892 - 41192831
Alignment:
Q  101 atgcccaaaccacgtaagcctattttccaccatcttttctactatcggtgttaccccaactc 162  Q
    |||| |||| ||| |||| ||| |||||||||||||||||||| | |||| |||||||||||    
T  41192892 atgcacaaatcacctaagtctagtttccaccatcttttctactgtaggtgctaccccaactc 41192831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 105 - 150
Target Start/End: Original strand, 42639250 - 42639295
Alignment:
Q  105 ccaaaccacgtaagcctattttccaccatcttttctactatcggtg 150  Q
    ||||||||| |||||||  |||||||||||||||||||||| ||||    
T  42639250 ccaaaccacctaagcctggtttccaccatcttttctactataggtg 42639295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 105 - 162
Target Start/End: Original strand, 44047578 - 44047635
Alignment:
Q  105 ccaaaccacgtaagcctattttccaccatcttttctactatcggtgttaccccaactc 162  Q
    ||||||||| ||||||||  ||| |||| |||||||||||| |||| |||||||||||    
T  44047578 ccaaaccacctaagcctagattctaccaccttttctactataggtgctaccccaactc 44047635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 101 - 142
Target Start/End: Original strand, 46715598 - 46715639
Alignment:
Q  101 atgcccaaaccacgtaagcctattttccaccatcttttctac 142  Q
    ||||||| ||||| |||||||| |||||||||||||||||||    
T  46715598 atgcccacaccacctaagcctagtttccaccatcttttctac 46715639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 102 - 162
Target Start/End: Complemental strand, 17900535 - 17900475
Alignment:
Q  102 tgcccaaaccacgtaagcctattttccaccatcttttctactatcggtgttaccccaactc 162  Q
    |||||||||||| | || ||| |||| ||| ||||||||||||| |||| |||||||||||    
T  17900535 tgcccaaaccacatgagtctagtttctaccgtcttttctactataggtgctaccccaactc 17900475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 145
Target Start/End: Original strand, 42285926 - 42285970
Alignment:
Q  101 atgcccaaaccacgtaagcctattttccaccatcttttctactat 145  Q
    ||||||||||||| |||| ||| |||| |||||||||||||||||    
T  42285926 atgcccaaaccacctaagtctagtttctaccatcttttctactat 42285970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 96 - 160
Target Start/End: Complemental strand, 51421791 - 51421727
Alignment:
Q  96 tgtaaatgcccaaaccacgtaagcctattttccaccatcttttctactatcggtgttaccccaac 160  Q
    |||| ||||||||||||| ||||||||||||| | |||||  ||||||||  ||| |||||||||    
T  51421791 tgtatatgcccaaaccacctaagcctattttctatcatctaatctactatatgtgctaccccaac 51421727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 157
Target Start/End: Original strand, 11822 - 11878
Alignment:
Q  101 atgcccaaaccacgtaagcctattttccaccatcttttctactatcggtgttacccc 157  Q
    ||||||||| ||  ||||||||||||| |||| |||||||||||| |||| ||||||    
T  11822 atgcccaaatcatctaagcctattttctaccaacttttctactataggtgctacccc 11878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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