View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3154_high_5 (Length: 530)
Name: NF3154_high_5
Description: NF3154
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3154_high_5 |
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Alignment Details
Target: chr7 (Bit Score: 351; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 351; E-Value: 0
Query Start/End: Original strand, 16 - 513
Target Start/End: Original strand, 25110745 - 25111267
Alignment:
| Q |
16 |
attatacttaatgattagttagttagaggttggagaatttttt-gcagtaggtaataatcaaaatctggacctcatcaataatatatcttcggcgtttca |
114 |
Q |
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||||||||| |||||||||||||| ||||||||||||||||| ||| || |||| |||||||||||||||||||| ||||||||||||||| ||||||| |
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| T |
25110745 |
attatacttggtgattagttagttacaggttggagaatttttttgcaatatgtaagaatcaaaatctggacctcattaataatatatcttcgacgtttca |
25110844 |
T |
|
| Q |
115 |
aaccata-------------ccttggaagata----------tatgtaagtgtacttttaaccctaaaacactnnnnnnntatacaagaagatgcagaat |
191 |
Q |
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||||||| ||||||| |||| ||| ||||||||| ||||||||||||||||| |||||||||||||||||||| |
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| T |
25110845 |
aaccataccattggattataccttggaggataagtttcactatatttaagtgtacatttaaccctaaaacactaaaaaaatatacaagaagatgcagaat |
25110944 |
T |
|
| Q |
192 |
atgcaaaaatgtacttgaagaacatgaaagtatatatataatagcaaccttaaaatgatatagagtagaaagaaaatgacctttctagcatacaaattag |
291 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25110945 |
atgcaaaaatgtacttgaagaacatgaaagtatatatataatagcaaccataaaatgatatagagtagaaagaaaatgacctttctagcatacaaattag |
25111044 |
T |
|
| Q |
292 |
ctagaatagcaccccaaccaccattatcaaaactcatctgaattatggaggagccaaatagcacgatttgaggtctcattggtcctgccataactttata |
391 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25111045 |
ctagaatagcaccccaaccaccattatcaaaactcatctgaattatggaggagccaaatagcacgatttgaggtctcattggtcctgccataactttata |
25111144 |
T |
|
| Q |
392 |
ctatgttgttattttatttggctccctctcactcaaacactcctcctgagatgttgcactatgtatcatattggaatcacaatttatagatgtggatttt |
491 |
Q |
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||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25111145 |
ctatgttgttattttatttggctccctctcactcaaacactactcctgagatgttgcactatgtatcatattggaatcacaatttatagatgtggatttt |
25111244 |
T |
|
| Q |
492 |
atta-ttttttgattaattttct |
513 |
Q |
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|||| ||||||||||| |||||| |
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| T |
25111245 |
attatttttttgattatttttct |
25111267 |
T |
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