View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3155_high_32 (Length: 250)
Name: NF3155_high_32
Description: NF3155
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3155_high_32 |
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Alignment Details
Target: chr3 (Bit Score: 196; Significance: 1e-107; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 1 - 244
Target Start/End: Complemental strand, 49825070 - 49824827
Alignment:
| Q |
1 |
taaggtactttctttaaacttatgttaatgatccatatacagattatataatgtagtttattttttacttatcaagtgagnnnnnnnnatgaaggttggt |
100 |
Q |
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| T |
49825070 |
taaggtaccttctttaaacttatgttaatgatccatatacagattatataatgtagtttattttttacttatcaagtaagttttttttatgaaggttggt |
49824971 |
T |
|
| Q |
101 |
catgaagatatagacgaagatacacacgacaatatgctgaatctatccggtgacacgccagtggaggtaacattacctatattataatacaatcaaattt |
200 |
Q |
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| T |
49824970 |
catgaagatatagacgaagatacacacgacaatatgctgaatctatccggtgacacgccagtggaggtaacattacctatactataatataatcaaattt |
49824871 |
T |
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| Q |
201 |
tttcttcatgtttaaaaacgacccattcgttgtccctatgctac |
244 |
Q |
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||||||||||||||||||||||||||||||||||| ||| |||| |
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| T |
49824870 |
tttcttcatgtttaaaaacgacccattcgttgtccttattctac |
49824827 |
T |
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