View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3155_high_6 (Length: 465)
Name: NF3155_high_6
Description: NF3155
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3155_high_6 |
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Alignment Details
Target: chr4 (Bit Score: 262; Significance: 1e-146; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 262; E-Value: 1e-146
Query Start/End: Original strand, 150 - 415
Target Start/End: Complemental strand, 46313330 - 46313065
Alignment:
| Q |
150 |
ggagaaacctgaggaattatgtgacacacacgttaattatcagaaaatctacgactagtgttcttcttctcttcggttacattaaacagaaaagggggtg |
249 |
Q |
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| T |
46313330 |
ggagaaacctgaggaattatgtgacacacacgttaattatcagaaaatctacgactagtgttcttcttctcttcggttacattaaacagaaaaaggggtg |
46313231 |
T |
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| Q |
250 |
tgaaccttgttctttgtttcctgaaacagacatgtatgtatgtatgtcagagtgagagttaagagttgttgaatttaataataaagtactgacatttagt |
349 |
Q |
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| T |
46313230 |
tgaaccttgttctttgtttcctgaaacagacatgtatgtatgtatgtcagagtgagagttaagagttgttgaatttaataataaagtactgacatttagt |
46313131 |
T |
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| Q |
350 |
ttagccgatacgatacctttgtttgttgtttgtactattttcgaagctaatctaatggattgaatt |
415 |
Q |
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| T |
46313130 |
ttagccgatacgatacctttgtttgttgtttgtactattttcgaagctaatctaatggattgaatt |
46313065 |
T |
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