View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3162_high_62 (Length: 267)

Name: NF3162_high_62
Description: NF3162
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3162_high_62
NF3162_high_62
[»] chr3 (30 HSPs)
chr3 (1-239)||(37032108-37032335)
chr3 (65-219)||(30904834-30904988)
chr3 (1-145)||(27252417-27252562)
chr3 (45-178)||(3414592-3414726)
chr3 (133-237)||(4557305-4557410)
chr3 (133-237)||(48390817-48390922)
chr3 (134-237)||(4016044-4016148)
chr3 (11-218)||(3385875-3386085)
chr3 (96-234)||(4553137-4553275)
chr3 (133-243)||(49025664-49025774)
chr3 (70-159)||(772873-772961)
chr3 (133-237)||(44172609-44172714)
chr3 (133-237)||(44179309-44179414)
chr3 (134-238)||(44953434-44953539)
chr3 (133-237)||(52198138-52198243)
chr3 (77-145)||(27937666-27937734)
chr3 (146-237)||(29284332-29284424)
chr3 (109-161)||(42243346-42243398)
chr3 (133-200)||(44639257-44639325)
chr3 (57-128)||(9220316-9220387)
chr3 (134-200)||(23546979-23547046)
chr3 (1-93)||(34593005-34593099)
chr3 (81-144)||(40890278-40890340)
chr3 (139-200)||(7469815-7469877)
chr3 (80-145)||(26207213-26207279)
chr3 (62-104)||(38347524-38347566)
chr3 (133-234)||(42758357-42758459)
chr3 (133-198)||(53631887-53631953)
chr3 (134-198)||(34119640-34119705)
chr3 (133-197)||(20086992-20087056)
[»] chr4 (56 HSPs)
chr4 (1-216)||(42907742-42907959)
chr4 (30-234)||(25941022-25941229)
chr4 (11-234)||(21956818-21957043)
chr4 (16-201)||(8843842-8844029)
chr4 (16-201)||(8856806-8856993)
chr4 (1-195)||(33516115-33516313)
chr4 (11-146)||(25265240-25265376)
chr4 (1-146)||(17113096-17113242)
chr4 (45-157)||(36306686-36306798)
chr4 (1-145)||(33616209-33616355)
chr4 (1-151)||(12075719-12075871)
chr4 (13-197)||(9929208-9929395)
chr4 (11-246)||(25298825-25299062)
chr4 (46-199)||(36919026-36919179)
chr4 (20-144)||(21714070-21714196)
chr4 (11-177)||(30034539-30034707)
chr4 (134-237)||(1724311-1724415)
chr4 (45-222)||(4741232-4741409)
chr4 (23-141)||(39086033-39086152)
chr4 (47-161)||(12505608-12505722)
chr4 (11-151)||(7334273-7334413)
chr4 (135-244)||(29527803-29527913)
chr4 (83-161)||(40420663-40420741)
chr4 (1-186)||(9280941-9281129)
chr4 (126-234)||(19883060-19883169)
chr4 (135-243)||(21544570-21544679)
chr4 (80-145)||(35304611-35304675)
chr4 (135-206)||(18423581-18423653)
chr4 (134-200)||(5902652-5902719)
chr4 (134-200)||(6382310-6382377)
chr4 (134-200)||(7608960-7609027)
chr4 (78-244)||(16575046-16575213)
chr4 (45-88)||(24474965-24475008)
chr4 (104-151)||(43553406-43553453)
chr4 (134-200)||(44317525-44317592)
chr4 (101-152)||(50376438-50376489)
chr4 (135-235)||(45065240-45065341)
chr4 (1-145)||(37926416-37926560)
chr4 (133-200)||(47550391-47550459)
chr4 (78-150)||(55783438-55783510)
chr4 (78-150)||(55847620-55847692)
chr4 (101-198)||(10302040-10302139)
chr4 (134-200)||(11122907-11122974)
chr4 (134-220)||(26564821-26564908)
chr4 (74-137)||(43351477-43351540)
chr4 (134-200)||(55826661-55826728)
chr4 (134-220)||(7985143-7985226)
chr4 (79-145)||(19549003-19549069)
chr4 (81-151)||(24474529-24474599)
chr4 (139-220)||(32585484-32585566)
chr4 (134-237)||(11028063-11028167)
chr4 (133-200)||(19534444-19534512)
chr4 (77-157)||(37384206-37384285)
chr4 (159-234)||(41915000-41915076)
chr4 (138-237)||(47103732-47103832)
chr4 (133-220)||(48459470-48459558)
[»] chr6 (26 HSPs)
chr6 (11-244)||(9402448-9402683)
chr6 (11-220)||(20348924-20349135)
chr6 (11-193)||(34346049-34346243)
chr6 (21-184)||(1947844-1948010)
chr6 (107-237)||(13769029-13769160)
chr6 (32-198)||(29341131-29341305)
chr6 (109-243)||(32959820-32959954)
chr6 (88-220)||(256509-256643)
chr6 (1-160)||(2126699-2126860)
chr6 (152-237)||(28079696-28079782)
chr6 (77-145)||(14321794-14321862)
chr6 (134-238)||(32053072-32053177)
chr6 (133-237)||(32853827-32853932)
chr6 (32-244)||(8320788-8321003)
chr6 (133-220)||(24225681-24225769)
chr6 (133-243)||(24602850-24602961)
chr6 (57-150)||(34179096-34179190)
chr6 (147-219)||(14410873-14410946)
chr6 (134-237)||(5863383-5863487)
chr6 (134-200)||(27534668-27534735)
chr6 (45-151)||(21877096-21877201)
chr6 (141-237)||(2367317-2367414)
chr6 (133-237)||(27738755-27738860)
chr6 (135-243)||(29199879-29199988)
chr6 (133-200)||(12678131-12678199)
chr6 (133-220)||(32532523-32532611)
[»] chr8 (31 HSPs)
chr8 (11-220)||(28345350-28345562)
chr8 (1-184)||(36274892-36275077)
chr8 (11-166)||(29918466-29918623)
chr8 (11-220)||(8545366-8545578)
chr8 (16-145)||(6388598-6388729)
chr8 (77-243)||(30903973-30904139)
chr8 (17-243)||(5700221-5700450)
chr8 (1-220)||(17084124-17084348)
chr8 (57-157)||(12468299-12468399)
chr8 (125-243)||(14186295-14186414)
chr8 (63-220)||(9476030-9476188)
chr8 (69-149)||(17108295-17108375)
chr8 (146-243)||(17469251-17469349)
chr8 (53-151)||(39379666-39379763)
chr8 (133-237)||(29108822-29108927)
chr8 (133-220)||(40248388-40248476)
chr8 (45-144)||(5793480-5793579)
chr8 (14-137)||(27777299-27777425)
chr8 (134-200)||(32303045-32303112)
chr8 (134-232)||(43113631-43113730)
chr8 (141-237)||(20399583-20399680)
chr8 (101-244)||(9642344-9642489)
chr8 (134-198)||(24927933-24927998)
chr8 (133-237)||(27932396-27932501)
chr8 (109-161)||(14155491-14155543)
chr8 (134-237)||(24568922-24569026)
chr8 (125-219)||(45236040-45236135)
chr8 (133-237)||(1063490-1063595)
chr8 (133-237)||(39445576-39445681)
chr8 (141-200)||(1012610-1012670)
chr8 (141-193)||(34139439-34139491)
[»] chr7 (40 HSPs)
chr7 (17-198)||(3773939-3774123)
chr7 (45-244)||(23475256-23475457)
chr7 (1-237)||(3156937-3157176)
chr7 (11-192)||(11472759-11472941)
chr7 (11-156)||(31345390-31345537)
chr7 (11-184)||(4101405-4101582)
chr7 (57-159)||(36251009-36251111)
chr7 (133-238)||(27850325-27850431)
chr7 (45-161)||(19440087-19440204)
chr7 (11-243)||(43550411-43550644)
chr7 (45-161)||(6557801-6557919)
chr7 (45-161)||(23533680-23533798)
chr7 (1-159)||(37217858-37218017)
chr7 (133-200)||(30650619-30650687)
chr7 (133-243)||(3920526-3920637)
chr7 (135-237)||(32546182-32546285)
chr7 (133-234)||(5377073-5377175)
chr7 (133-237)||(18825872-18825977)
chr7 (139-220)||(39456032-39456113)
chr7 (79-151)||(29292636-29292708)
chr7 (134-237)||(45380096-45380200)
chr7 (134-200)||(35074459-35074526)
chr7 (141-237)||(2630574-2630670)
chr7 (133-237)||(10072454-10072559)
chr7 (162-243)||(26004468-26004549)
chr7 (134-222)||(27063127-27063216)
chr7 (133-228)||(44734366-44734462)
chr7 (162-237)||(3226946-3227021)
chr7 (134-200)||(17851843-17851910)
chr7 (134-200)||(18125265-18125332)
chr7 (134-200)||(21702648-21702715)
chr7 (62-149)||(24903334-24903421)
chr7 (141-237)||(12980373-12980470)
chr7 (133-237)||(17885453-17885558)
chr7 (135-203)||(27063324-27063393)
chr7 (135-219)||(28309482-28309567)
chr7 (133-237)||(38152875-38152980)
chr7 (73-146)||(40335732-40335805)
chr7 (133-200)||(37182263-37182330)
chr7 (133-200)||(45885802-45885870)
[»] chr5 (32 HSPs)
chr5 (1-220)||(17153018-17153240)
chr5 (18-220)||(8020485-8020686)
chr5 (69-244)||(12457436-12457612)
chr5 (45-235)||(27900404-27900593)
chr5 (11-220)||(29664830-29665042)
chr5 (16-244)||(6810028-6810253)
chr5 (105-235)||(32574941-32575072)
chr5 (17-234)||(38972787-38973007)
chr5 (1-146)||(35583966-35584112)
chr5 (16-151)||(18451973-18452110)
chr5 (1-198)||(40187697-40187896)
chr5 (1-148)||(24207539-24207685)
chr5 (125-243)||(38006464-38006583)
chr5 (79-145)||(457466-457532)
chr5 (133-200)||(2985130-2985198)
chr5 (45-220)||(16311311-16311486)
chr5 (125-218)||(12834594-12834688)
chr5 (133-197)||(6092559-6092624)
chr5 (19-160)||(16366526-16366671)
chr5 (133-237)||(4920809-4920914)
chr5 (76-161)||(36579355-36579440)
chr5 (133-220)||(12866569-12866657)
chr5 (133-220)||(15890190-15890277)
chr5 (133-200)||(35194027-35194095)
chr5 (133-200)||(42987517-42987585)
chr5 (133-239)||(15564619-15564726)
chr5 (154-220)||(28569039-28569106)
chr5 (75-141)||(39887199-39887265)
chr5 (133-237)||(4583102-4583207)
chr5 (53-118)||(12770661-12770726)
chr5 (133-237)||(28045639-28045743)
chr5 (133-200)||(5908726-5908794)
[»] chr1 (32 HSPs)
chr1 (17-184)||(36421632-36421802)
chr1 (80-203)||(48125717-48125841)
chr1 (1-145)||(42729037-42729183)
chr1 (1-144)||(13692494-13692640)
chr1 (45-203)||(41476986-41477145)
chr1 (1-203)||(16903371-16903578)
chr1 (11-161)||(8880308-8880460)
chr1 (17-236)||(39219124-39219346)
chr1 (45-146)||(43513121-43513222)
chr1 (134-237)||(12494995-12495099)
chr1 (83-161)||(33293597-33293675)
chr1 (56-183)||(23719510-23719637)
chr1 (133-237)||(29936400-29936505)
chr1 (133-220)||(29871302-29871390)
chr1 (134-200)||(28297919-28297986)
chr1 (79-150)||(48576206-48576277)
chr1 (133-237)||(19572512-19572617)
chr1 (78-151)||(47644946-47645019)
chr1 (81-141)||(2581505-2581564)
chr1 (125-200)||(23490808-23490884)
chr1 (69-203)||(5283627-5283762)
chr1 (109-144)||(13798198-13798233)
chr1 (135-233)||(16237308-16237407)
chr1 (139-237)||(34611063-34611162)
chr1 (139-237)||(36187220-36187319)
chr1 (162-220)||(42707854-42707911)
chr1 (62-151)||(5293497-5293586)
chr1 (135-203)||(23058452-23058521)
chr1 (2-151)||(25181054-25181206)
chr1 (134-190)||(49741054-49741111)
chr1 (133-237)||(51421842-51421947)
chr1 (154-237)||(34673282-34673366)
[»] chr2 (27 HSPs)
chr2 (46-219)||(30696821-30696995)
chr2 (62-237)||(25210290-25210466)
chr2 (1-149)||(34544400-34544550)
chr2 (69-216)||(13531869-13532017)
chr2 (45-157)||(29656816-29656928)
chr2 (11-143)||(34214752-34214885)
chr2 (11-236)||(35248386-35248610)
chr2 (21-147)||(35409245-35409371)
chr2 (17-157)||(13954611-13954753)
chr2 (17-157)||(14095818-14095960)
chr2 (11-133)||(31600873-31600997)
chr2 (1-169)||(35965184-35965356)
chr2 (45-145)||(11958911-11959011)
chr2 (135-237)||(38342519-38342622)
chr2 (48-114)||(40734707-40734773)
chr2 (77-161)||(17845468-17845553)
chr2 (134-200)||(36128143-36128210)
chr2 (81-144)||(40359276-40359339)
chr2 (85-200)||(4961488-4961601)
chr2 (134-243)||(6027883-6027993)
chr2 (133-237)||(8915938-8916042)
chr2 (135-233)||(3547152-3547251)
chr2 (134-200)||(24414169-24414236)
chr2 (146-200)||(30846943-30846998)
chr2 (133-200)||(7314685-7314753)
chr2 (62-161)||(34320535-34320635)
chr2 (162-222)||(45115572-45115632)
[»] scaffold0244 (1 HSPs)
scaffold0244 (3-145)||(4673-4817)
[»] scaffold0264 (1 HSPs)
scaffold0264 (74-220)||(17472-17619)
[»] scaffold1322 (1 HSPs)
scaffold1322 (77-159)||(1038-1120)
[»] scaffold0157 (1 HSPs)
scaffold0157 (47-161)||(14755-14869)
[»] scaffold0036 (1 HSPs)
scaffold0036 (134-237)||(33377-33481)


Alignment Details
Target: chr3 (Bit Score: 161; Significance: 6e-86; HSPs: 30)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 161; E-Value: 6e-86
Query Start/End: Original strand, 1 - 239
Target Start/End: Complemental strand, 37032335 - 37032108
Alignment:
Q  1 agagtgtggaatattgaaggagaaaagaaagaactatgataattgtgtcatctgaaagaccgagactctgattgtatgagtgaaatgatttagaatttgg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||     
T  37032335 agagtgtggaatattgaaggagaaaagaaagaactatgataattgtgtcatctgaaagaccgagactctgattgtatgagtgaaatgatttagggtttga 37032236  T
Q  101 gtttttatttatataaaatgggtaataaattgattttctacattcgggacggatttgggtagggttcgggatgagtacctatattcccgttacccgtccc 200  Q
    ||||||||||||||||||||||||||||||| ||||||||||||| |||            ||||| | |||||||||||||||||| ||||||||||||    
T  37032235 gtttttatttatataaaatgggtaataaattaattttctacattcagga-----------tgggtttgagatgagtacctatattcctgttacccgtccc 37032147  T
Q  201 gtatccatcttttgaaatcgagacaaacccaaacccaat 239  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  37032146 gtatctatcttttgaaatcgagacaaacccaaacccaat 37032108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 65 - 219
Target Start/End: Complemental strand, 30904988 - 30904834
Alignment:
Q  65 actctgattgtatgagtgaaatgatttagaatttgggtttttatttatataaaatgggtaataaattgattttctacattcgggacggatttgggta-gg 163  Q
    ||||||| | |||||||||||||||| ||  ||||||||| ||||||||||||| ||||| ||||||||||| ||||||||| |||||||||||||| ||    
T  30904988 actctgactatatgagtgaaatgattaagggtttgggtttctatttatataaaaggggtagtaaattgatttcctacattcgagacggatttgggtatgg 30904889  T
Q  164 gttcgggatgagtacctatattcccgttacccgtcccgtatccatcttttgaaatc 219  Q
    ||||||| || |||||||||| |||| ||||||||||||| || | ||||||||||    
T  30904888 gttcggggtgggtacctatatccccg-tacccgtcccgtacccgtgttttgaaatc 30904834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 27252417 - 27252562
Alignment:
Q  1 agagtgtggaatattgaaggagaaaagaaagaactatgataattg--tgtcatctgaaagaccgagactctgattgtatgagtgaaatgatttagaattt 98  Q
    ||||||||  |||| |||||||||| || ||||||| ||||| ||  ||||||||||||||| || ||||| | ||| ||||||||||||||||  ||||    
T  27252417 agagtgtgagatatggaaggagaaa-gagagaactaagataagtgagtgtcatctgaaagactgatactctaactgtgtgagtgaaatgatttatgattt 27252515  T
Q  99 gggtttttatttatataaaatgggtaataaattgattttctacattc 145  Q
     ||||| ||||||||||||||||||||||||||||  ||||||||||    
T  27252516 tggtttctatttatataaaatgggtaataaattgaaattctacattc 27252562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 45 - 178
Target Start/End: Complemental strand, 3414726 - 3414592
Alignment:
Q  45 gtgtcatctgaaagaccgagactctgattgtatgagtgaaatgatttagaatttgggtttttatttatataaaatgggtaataaattgattttctacatt 144  Q
    |||||| || ||||| ||||||| ||| | | |||||||||||||||||  ||| | |||||||||||| |||| ||||| |||| ||||||||||||||    
T  3414726 gtgtcaactaaaagaacgagactttgactatgtgagtgaaatgatttagggtttcgatttttatttatagaaaaggggtattaaaatgattttctacatt 3414627  T
Q  145 cgggacggatttgggta-gggttcgggatgagtac 178  Q
     || |||| |||| ||| || ||||||||||||||    
T  3414626 aggtacgggtttgagtatggattcgggatgagtac 3414592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 133 - 237
Target Start/End: Complemental strand, 4557410 - 4557305
Alignment:
Q  133 attttctacattcgggacggatttgggta-gggttcgggatgagtacctatattcccgttacccgtcccgtatccatcttttgaaatcgagacaaaccca 231  Q
    ||||||| |||||||||  |||||||||| ||||||||| || |||||||||| | ||||||||||||| || |||| |||||||| || |  |||||||    
T  4557410 attttctgcattcgggatagatttgggtatgggttcggggtgggtacctatatactcgttacccgtcccatacccatgttttgaaaacggggaaaaccca 4557311  T
Q  232 aaccca 237  Q
    ||||||    
T  4557310 aaccca 4557305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 133 - 237
Target Start/End: Complemental strand, 48390922 - 48390817
Alignment:
Q  133 attttctacattcgggacggatttgggta-gggttcgggatgagtacctatattcccgttacccgtcccgtatccatcttttgaaatcgagacaaaccca 231  Q
    ||||| ||| |||||||||| | |||||| |||||| ||||| |||||||||||||||||||||||||| || || | ||||||||||| |  |||||||    
T  48390922 attttttacgttcgggacgggtatgggtatgggttcaggatgggtacctatattcccgttacccgtcccatacccgtgttttgaaatcggggaaaaccca 48390823  T
Q  232 aaccca 237  Q
     |||||    
T  48390822 taccca 48390817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 134 - 237
Target Start/End: Complemental strand, 4016148 - 4016044
Alignment:
Q  134 ttttctacattcgggacggatttgggta-gggttcgggatgagtacctatattcccgttacccgtcccgtatccatcttttgaaatcgagacaaacccaa 232  Q
    |||||| |||||||||||  |||||||| ||||||||  || |||||||||| ||||||| ||||||| || |||| ||||||||||| |  ||||||||    
T  4016148 ttttctgcattcgggacgagtttgggtatgggttcggagtgggtacctatatacccgttatccgtcccatacccatgttttgaaatcggggaaaacccaa 4016049  T
Q  233 accca 237  Q
    |||||    
T  4016048 accca 4016044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 11 - 218
Target Start/End: Complemental strand, 3386085 - 3385875
Alignment:
Q  11 atattgaaggagaaaagaaagaactatgataattg--tgtcatctgaaagaccgagactctgattgtatgagtgaaatgatttagaatttgggtttttat 108  Q
    |||| |||||||| |||| |||||| ||||||  |  ||||| || ||||||||||||| | | | | | ||||||||||||||| |||| | |||||||    
T  3386085 atatggaaggagataagagagaactttgataagagagtgtcaactaaaagaccgagactttaactatgtaagtgaaatgatttaggatttcgatttttat 3385986  T
Q  109 ttatataaaatgggtaataaattgattttctacattcgggacggatttgggta-gggttcgggatgagtacctatattcccgttacccgtcccgtatcca 207  Q
    ||||| |||| || || |||| ||||||| |||||| || |||| ||| |||| || |||| | ||  ||||||||| | ||||||| |||||||| ||     
T  3385985 ttatagaaaagggttactaaaatgattttttacattaggtacgggttttggtatggattcgtggtggctacctatatcctcgttacctgtcccgtacccg 3385886  T
Q  208 tcttttgaaat 218  Q
    | |||||||||    
T  3385885 tgttttgaaat 3385875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 96 - 234
Target Start/End: Original strand, 4553137 - 4553275
Alignment:
Q  96 tttgggtttttatttatataaaatgggtaataaattgattttctacattcgggacggatttgggta-gggttcgggatgagtacctatattcccgttacc 194  Q
    |||| ||||||||||||||||||    ||||||||||||||| |||||||| ||||| |||| ||| ||||||||| || |||  ||||| ||  |||||    
T  4553137 tttgagtttttatttatataaaaaaa-taataaattgattttttacattcgagacgggtttgagtatgggttcggggtgtgtatttatatccctattacc 4553235  T
Q  195 cgtcccgtatccatcttttgaaatcgagacaaacccaaac 234  Q
    ||| ||| | |||| ||||||||||| || |||| |||||    
T  4553236 cgttccgcacccatgttttgaaatcgggaaaaactcaaac 4553275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 133 - 243
Target Start/End: Original strand, 49025664 - 49025774
Alignment:
Q  133 attttctacattcgggacggatttgggta-gggttcgggatgagtacctatattcccgttacccgtcccgtatccatcttttgaaatcgagacaaaccca 231  Q
    ||||| |||||| ||||||| |||||||| |||||||| ||| |||||||||| || |||||||||||| || || | |||||| |||| |  |||||||    
T  49025664 attttttacatttgggacgggtttgggtatgggttcgg-atgtgtacctatatacctgttacccgtcccatacccgtgttttgagatcggggaaaaccca 49025762  T
Q  232 aacccaatcaaa 243  Q
    |||||| |||||    
T  49025763 aacccagtcaaa 49025774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 70 - 159
Target Start/End: Complemental strand, 772961 - 772873
Alignment:
Q  70 gattgtatgagtgaaatgatttagaatttgggtttttatttatataaaatgggtaataaattgattttctacattcgggacggatttggg 159  Q
    |||||| |||||||||||||| |   |||| |||| |||||||| |||| ||||||||||||||||||||| ||| |||||  |||||||    
T  772961 gattgtgtgagtgaaatgattcaaggtttgagtttctatttatacaaaa-gggtaataaattgattttctatatttgggacatatttggg 772873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 133 - 237
Target Start/End: Original strand, 44172609 - 44172714
Alignment:
Q  133 attttctacattcgggacggatttgggta-gggttcgggatgagtacctatattcccgttacccgtcccgtatccatcttttgaaatcgagacaaaccca 231  Q
    ||||| |||||| ||||||| |||||||| ||||||||| || |||| ||||| ||||||||||||||| || || | |||||| |||| |  |||||||    
T  44172609 attttttacatttgggacgggtttgggtatgggttcggggtgggtacttatatacccgttacccgtcccatacccgtgttttgagatcggggaaaaccca 44172708  T
Q  232 aaccca 237  Q
     |||||    
T  44172709 taccca 44172714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 133 - 237
Target Start/End: Original strand, 44179309 - 44179414
Alignment:
Q  133 attttctacattcgggacggatttgggta-gggttcgggatgagtacctatattcccgttacccgtcccgtatccatcttttgaaatcgagacaaaccca 231  Q
    ||||| |||||| ||||||| |||||||| ||||||||| || |||| ||||| ||||||||||||||| || || | |||||| |||| |  |||||||    
T  44179309 attttttacatttgggacgggtttgggtatgggttcggggtgggtacttatatacccgttacccgtcccatacccgtgttttgagatcggggaaaaccca 44179408  T
Q  232 aaccca 237  Q
     |||||    
T  44179409 taccca 44179414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 134 - 238
Target Start/End: Complemental strand, 44953539 - 44953434
Alignment:
Q  134 ttttctacattcgggacggatttgggtagg-gttcgggatgagtacctatattcccgttacccgtcccgtatccatcttttgaaatcgagacaaacccaa 232  Q
    |||| |||||| ||||||| |||| ||| | ||||||| ||||||||||||| ||||||||||||||| || || | |||||| |||| |  |||||||     
T  44953539 ttttttacatttgggacgggtttgagtatgagttcggggtgagtacctatatacccgttacccgtcccatacccgtgttttgagatcggggaaaacccat 44953440  T
Q  233 acccaa 238  Q
    ||||||    
T  44953439 acccaa 44953434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 133 - 237
Target Start/End: Original strand, 52198138 - 52198243
Alignment:
Q  133 attttctacattcgggacggatttgggta-gggttcgggatgagtacctatattcccgttacccgtcccgtatccatcttttgaaatcgagacaaaccca 231  Q
    ||||| |||||| || |||| |||||||| ||||||||| || |||||||||| ||||||||||||||| || |  | |||||| |||| || |||||||    
T  52198138 attttttacatttggaacgggtttgggtatgggttcggggtgggtacctatatacccgttacccgtcccatacctgtgttttgagatcgggaaaaaccca 52198237  T
Q  232 aaccca 237  Q
     |||||    
T  52198238 taccca 52198243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 77 - 145
Target Start/End: Original strand, 27937666 - 27937734
Alignment:
Q  77 tgagtgaaatgatttagaatttgggtttttatttatataaaatgggtaataaattgattttctacattc 145  Q
    |||||||||||||||||  ||| ||||| |||||||||||||   |||||||||| |||| ||||||||    
T  27937666 tgagtgaaatgatttagggtttaggtttctatttatataaaagctgtaataaattaatttcctacattc 27937734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 146 - 237
Target Start/End: Original strand, 29284332 - 29284424
Alignment:
Q  146 gggacggatttgggta-gggttcgggatgagtacctatattcccgttacccgtcccgtatccatcttttgaaatcgagacaaacccaaaccca 237  Q
    ||||||| |||||||| ||||||||| || |||||||||| ||||||||||||||| || || | ||| || |||| || ||||||| |||||    
T  29284332 gggacgggtttgggtatgggttcgggctgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcgggaaaaacccataccca 29284424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 109 - 161
Target Start/End: Original strand, 42243346 - 42243398
Alignment:
Q  109 ttatataaaatgggtaataaattgattttctacattcgggacggatttgggta 161  Q
    |||||||||| |||||||||||||||||||||||||  ||| || ||||||||    
T  42243346 ttatataaaaggggtaataaattgattttctacatttaggatgggtttgggta 42243398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 133 - 200
Target Start/End: Original strand, 44639257 - 44639325
Alignment:
Q  133 attttctacattcgggacggatttgggta-gggttcgggatgagtacctatattcccgttacccgtccc 200  Q
    ||||| |||||| || |||| |||||||| ||||||||| || |||||||||| |||||||||||||||    
T  44639257 attttttacatttggaacgggtttgggtatgggttcggggtgggtacctatatacccgttacccgtccc 44639325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 57 - 128
Target Start/End: Complemental strand, 9220387 - 9220316
Alignment:
Q  57 agaccgagactctgattgtatgagtgaaatgatttagaatttgggtttttatttatataaaatgggtaataa 128  Q
    |||| |||||||||| |||||||||| ||||||||||  | || ||||||||||||  |||| |||||||||    
T  9220387 agactgagactctgactgtatgagtggaatgatttagggtatgagtttttatttatgaaaaaagggtaataa 9220316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 134 - 200
Target Start/End: Complemental strand, 23547046 - 23546979
Alignment:
Q  134 ttttctacattcgggacggatttgggta-gggttcgggatgagtacctatattcccgttacccgtccc 200  Q
    |||| |||||| ||||||  |||||||| ||||||||| || |||||||||| |||||||||||||||    
T  23547046 ttttttacatttgggacgagtttgggtatgggttcggggtgggtacctatatacccgttacccgtccc 23546979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 34593005 - 34593099
Alignment:
Q  1 agagtgtggaatattgaaggagaaaagaaagaactatgataattg--tgtcatctgaaagaccgagactctgattgtatgagtgaaatgatttag 93  Q
    ||||||||  |||| ||||||||||  | ||||||||||||| ||  ||| || |||||||||||||| || ||||| | |||||||||||||||    
T  34593005 agagtgtgagatatggaaggagaaacaatagaactatgataagtgagtgttatgtgaaagaccgagaccctaattgtgtaagtgaaatgatttag 34593099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 81 - 144
Target Start/End: Original strand, 40890278 - 40890340
Alignment:
Q  81 tgaaatgatttagaatttgggtttttatttatataaaatgggtaataaattgattttctacatt 144  Q
    ||||||||| |||| |||| |||| |||||||||| || || ||||||||||||||||||||||    
T  40890278 tgaaatgatctagagtttgagtttctatttatatagaa-ggataataaattgattttctacatt 40890340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 200
Target Start/End: Complemental strand, 7469877 - 7469815
Alignment:
Q  139 tacattcgggacggatttgggta-gggttcgggatgagtacctatattcccgttacccgtccc 200  Q
    |||||| ||||||| |||| ||| ||||||||| || |||||||||| |||||||||||||||    
T  7469877 tacatttgggacgggtttgtgtatgggttcggggtgggtacctatatacccgttacccgtccc 7469815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 80 - 145
Target Start/End: Original strand, 26207213 - 26207279
Alignment:
Q  80 gtgaaatgatttagaatttgggtttttatttatat-aaaatgggtaataaattgattttctacattc 145  Q
    ||||||||||||||  |||||||||  |||||||| ||||  ||||||||||||||| |||||||||    
T  26207213 gtgaaatgatttagggtttgggtttcaatttatataaaaaaaggtaataaattgattatctacattc 26207279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 62 - 104
Target Start/End: Original strand, 38347524 - 38347566
Alignment:
Q  62 gagactctgattgtatgagtgaaatgatttagaatttgggttt 104  Q
    |||||||||| |||||||||||||||||||||| |||| ||||    
T  38347524 gagactctgactgtatgagtgaaatgatttagagtttgagttt 38347566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 234
Target Start/End: Original strand, 42758357 - 42758459
Alignment:
Q  133 attttctacattcgggacggatttgggta-gggttcgggatgagtacctatattcccgttacccgtcccgtatccatcttttgaaatcgagacaaaccca 231  Q
    ||||||| | |||||||||| |||||||| ||||||||| ||  ||||||||| || |||||||||||| || |  | ||||||||||| |  |||||||    
T  42758357 attttcttcgttcgggacgggtttgggtatgggttcggggtgcatacctatatacctgttacccgtcccatacctgtgttttgaaatcgggggaaaccca 42758456  T
Q  232 aac 234  Q
    |||    
T  42758457 aac 42758459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 198
Target Start/End: Original strand, 53631887 - 53631953
Alignment:
Q  133 attttctacattcgggacggatttgggta-gggttcgggatgagtacctatattcccgttacccgtc 198  Q
    |||||||| ||||||||||  |||| ||| ||||||||| || |||||||||| |||||||||||||    
T  53631887 attttctagattcgggacgagtttgagtatgggttcggggtgggtacctatatacccgttacccgtc 53631953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 134 - 198
Target Start/End: Original strand, 34119640 - 34119705
Alignment:
Q  134 ttttctacattcgggacggatttgggta-gggttcgggatgagtacctatattcccgttacccgtc 198  Q
    |||||| |||| |||||||||||||||| ||||||||| || |||||||||| || |||| |||||    
T  34119640 ttttctgcatttgggacggatttgggtatgggttcggggtgggtacctatatacctgttatccgtc 34119705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 133 - 197
Target Start/End: Original strand, 20086992 - 20087056
Alignment:
Q  133 attttctacattcgggacggatttgggtagggttcgggatgagtacctatattcccgttacccgt 197  Q
    ||||| |||||| ||||||| | || |||||||||||| || |||||||||| ||| ||||||||    
T  20086992 attttttacatttgggacgggtatgagtagggttcggggtgggtacctatatacccattacccgt 20087056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 92; Significance: 9e-45; HSPs: 56)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 1 - 216
Target Start/End: Original strand, 42907742 - 42907959
Alignment:
Q  1 agagtgtggaatattgaaggagaaaagaaagaactatgataattgtg--tcatctgaaagaccgagactctgattgtatgagtgaaatgatttagaattt 98  Q
    ||||||||  |||| ||||||||||||| ||||||||||||| ||||  |||||||||||||  ||||||| | |||||||||||||||||||||  |||    
T  42907742 agagtgtgagatatggaaggagaaaagatagaactatgataagtgtgtgtcatctgaaagactaagactctaactgtatgagtgaaatgatttagggttt 42907841  T
Q  99 gggtttttatttatataaaatgggtaataaattgattttctacattcgggacggatttgggta-gggttcgggatgagtacctatattcccgttacccgt 197  Q
    | |||| ||||||||||||| | ||| ||||||||||||||||||||||||||  |||||||| ||| ||||| || |||||||||| ||| |||| |||    
T  42907842 gagtttctatttatataaaa-gagtagtaaattgattttctacattcgggacgagtttgggtatgggctcggggtgggtacctatatccccattactcgt 42907940  T
Q  198 cccgtatccatcttttgaa 216  Q
    ||||||||| | |||||||    
T  42907941 cccgtatccgtgttttgaa 42907959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 30 - 234
Target Start/End: Original strand, 25941022 - 25941229
Alignment:
Q  30 agaactatgataattg--tgtcatctgaaagaccgagactctgattgtatgagtgaaatgatttagaatttgggtttttatttatataaaatgggtaata 127  Q
    ||||||||||||| ||  |||||||||||||||  ||||| |||| || |||||||| ||||||||   |||||||| ||||||||||||| |||| |||    
T  25941022 agaactatgataagtgaatgtcatctgaaagactaagactatgatcgtgtgagtgaattgatttaggccttgggtttctatttatataaaaggggttata 25941121  T
Q  128 aattgattttctacattcgggacggatttgggta-gggttcgggatgagtacctatattcccgttacccgtcccgtatccatcttttgaaatcgagacaa 226  Q
    |||||||||||||||| || |||   |||||||| ||||||||| || |||||||| ||||||||||| |||||||| || | ||||||||||| || ||    
T  25941122 aattgattttctacatccgagacatgtttgggtatgggttcggggtgggtacctatcttcccgttacctgtcccgtacccgtgttttgaaatcgggaaaa 25941221  T
Q  227 acccaaac 234  Q
    ||||||||    
T  25941222 acccaaac 25941229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 11 - 234
Target Start/End: Complemental strand, 21957043 - 21956818
Alignment:
Q  11 atattgaaggagaaaagaaagaactatgataattg--tgtcatctgaaagaccgagactctgattgtatgagtgaaatgatttagaatttgggtttttat 108  Q
    |||| ||||||||||||| | ||||||||||| ||  |||||||| |||||| || ||||||| |||  || |||||||||||||  |||||||||||||    
T  21957043 atatggaaggagaaaagatataactatgataaatgagtgtcatctaaaagactgacactctgactgtgcgaatgaaatgatttagggtttgggtttttat 21956944  T
Q  109 ttatataaaatgggtaataaattgattttctacattcgggacggatttgggta-gggttcgggatgagtacctatattcccgttacccgtcccgtatcca 207  Q
    |||||||||| |||||||||||||||||||||||||||  |||  |||||||| ||||||||| || | |||||||| |||||||| | | ||||| ||     
T  21956943 ttatataaaa-gggtaataaattgattttctacattcgtaacgagtttgggtatgggttcggggtgggcacctatatccccgttactcattccgtacccg 21956845  T
Q  208 tcttttgaaatcgagacaaacccaaac 234  Q
    | |||| ||||||  | ||||||||||    
T  21956844 tgttttaaaatcggaaaaaacccaaac 21956818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 16 - 201
Target Start/End: Complemental strand, 8844029 - 8843842
Alignment:
Q  16 gaaggagaaaagaaagaactatgataattg--tgtcatctgaaagaccgagactctgattgtatgagtgaaatgatttagaatttgggtttttatttata 113  Q
    ||||||||||||| ||||||||||||| ||  ||||||||||||| |  ||||| ||| ||| ||||||||||||||||| ||||  |||| ||||||||    
T  8844029 gaaggagaaaagagagaactatgataagtgagtgtcatctgaaagtctaagactgtgactgtgtgagtgaaatgatttaggatttaagtttctatttata 8843930  T
Q  114 taaaatgggtaataaattgattttctacattcgggacggatttgggta-gggttcgggatgagtacctatattcccgttacccgtcccg 201  Q
    | ||| |||||||||||| |||||||||||||  ||||| |||||||| | ||||||| || ||| |||||| |||| |||||||||||    
T  8843929 tgaaaggggtaataaattaattttctacattcacgacgggtttgggtatgagttcggg-tgggtatctatatccccgctacccgtcccg 8843842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 16 - 201
Target Start/End: Complemental strand, 8856993 - 8856806
Alignment:
Q  16 gaaggagaaaagaaagaactatgataattg--tgtcatctgaaagaccgagactctgattgtatgagtgaaatgatttagaatttgggtttttatttata 113  Q
    ||||||||||||| ||||||||||||| ||  ||||||||||||| |  ||||| ||| ||| ||||||||||||||||| ||||  |||| ||||||||    
T  8856993 gaaggagaaaagagagaactatgataagtgagtgtcatctgaaagtctaagactgtgactgtgtgagtgaaatgatttaggatttaagtttctatttata 8856894  T
Q  114 taaaatgggtaataaattgattttctacattcgggacggatttgggta-gggttcgggatgagtacctatattcccgttacccgtcccg 201  Q
    | ||| |||||||||||| |||||||||||||  ||||| |||||||| | ||||||| || ||| |||||| |||| |||||||||||    
T  8856893 tgaaaggggtaataaattaattttctacattcacgacgggtttgggtatgagttcggg-tgggtatctatatccccgctacccgtcccg 8856806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 195
Target Start/End: Complemental strand, 33516313 - 33516115
Alignment:
Q  1 agagtgtggaatattgaaggagaaaagaaagaactatgataattg--tgtcatctgaaagaccgagactctgattg-tatgagtgaaatgatttagaatt 97  Q
    ||||||||  |||| ||||||||||||| |||| |||||||| ||  |||||||||||||||| ||||||| |  | | |||||||||||||||||  ||    
T  33516313 agagtgtgatatatagaaggagaaaagagagaattatgataagtgagtgtcatctgaaagaccaagactctaacgggtgtgagtgaaatgatttagggtt 33516214  T
Q  98 tgggtttttatttatataaaatgggtaataaattgattttctacattcgggacggatttgggta-gggttcgggatgagtacctatattcccgttaccc 195  Q
    || |||||||||||||||||| |||||||| ||||||||| |||||| | ||||| ||||||||  |||||||| || |||| ||||| || |||||||    
T  33516213 tgagtttttatttatataaaaggggtaatacattgattttttacatttgagacgggtttgggtataggttcggggtgggtacttatatccctgttaccc 33516115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 11 - 146
Target Start/End: Complemental strand, 25265376 - 25265240
Alignment:
Q  11 atattgaaggagaaaagaaagaactatgataattg--tgtcatctgaaagaccgagactctgattgtatgagtgaaatgatttagaatttgggtttttat 108  Q
    |||| ||||||||||||| |||||||||||||  |  |||||||||||| |  |||||||||||||| ||||| ||||||||||||||||| |||| |||    
T  25265376 atatggaaggagaaaagagagaactatgataagcgactgtcatctgaaaaattgagactctgattgtgtgagtaaaatgatttagaatttgagtttctat 25265277  T
Q  109 ttatataaaatgggtaataaattgattttctacattcg 146  Q
    ||||||| || || ||||||||||||||||||||||||    
T  25265276 ttatatagaa-ggataataaattgattttctacattcg 25265240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 17113242 - 17113096
Alignment:
Q  1 agagtgtggaatattgaaggagaaaagaaagaactatgataattg--tgtcatctgaaagaccgagactctgattgtatgagtgaaatgatttagaattt 98  Q
    ||||||||  |||| |||||| |||||| | ||||||||||| ||  ||||||||||||||| |||||||||| | |  |||||||||||||||  ||||    
T  17113242 agagtgtgagatatggaaggaaaaaagagataactatgataagtgagtgtcatctgaaagactgagactctgactttgggagtgaaatgatttaagattt 17113143  T
Q  99 gggtttttatttatataaaatgggtaataaattgattttctacattcg 146  Q
    |||||||||||||||| ||| | |||||||||||||||||||||||||    
T  17113142 gggtttttatttatatgaaa-gagtaataaattgattttctacattcg 17113096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 45 - 157
Target Start/End: Original strand, 36306686 - 36306798
Alignment:
Q  45 gtgtcatctgaaagaccgagactctgattgtatgagtgaaatgatttagaatttgggtttttatttatataaaatgggtaataaattgattttctacatt 144  Q
    ||||||||| |||||| |||||||| ||||| | ||||||||||||||  |||| | ||| ||||||||||||| |||||||||||||||||||||||||    
T  36306686 gtgtcatctcaaagactgagactctaattgtgtaagtgaaatgatttatgatttcgatttctatttatataaaaggggtaataaattgattttctacatt 36306785  T
Q  145 cgggacggatttg 157  Q
    |||||||| ||||    
T  36306786 cgggacgggtttg 36306798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 33616355 - 33616209
Alignment:
Q  1 agagtgtggaatattgaaggagaaaagaaagaactatgataattg--tgtcatctgaaagaccgagactctgattgtatgagtgaaatgatttagaattt 98  Q
    ||||||||  |||| || |||||||||| ||||||||||||| ||  |||||| ||||| |   ||||||||| ||| |||||||||||||||||  |||    
T  33616355 agagtgtgagatatggatggagaaaagagagaactatgataagtgagtgtcatatgaaatattaagactctgactgtgtgagtgaaatgatttagggttt 33616256  T
Q  99 gggtttttatttatataaaatgggtaataaattgattttctacattc 145  Q
     | ||||||||||||||||| ||||||||||||||||||||||||||    
T  33616255 tgatttttatttatataaaaggggtaataaattgattttctacattc 33616209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 12075871 - 12075719
Alignment:
Q  1 agagtgtggaatattgaaggagaaaagaaagaactatgataattg--tgtcatctgaaagaccgagactctgattgtatgagtgaaatgatttagaattt 98  Q
    ||||||||  |||| ||||||||||||| |||||||| |||| ||  |||||||| ||| || || ||||| | ||| || ||||||||||| ||| |||    
T  12075871 agagtgtgagatatagaaggagaaaagagagaactataataagtggatgtcatctaaaaaactgaaactctaactgtgtgggtgaaatgattcagagttt 12075772  T
Q  99 gggtttttatttatataaaatgggtaataaattgattttctacattcgggacg 151  Q
      |||| |||||||||||||||||||||||||||||||||||||||| |||||    
T  12075771 tagtttctatttatataaaatgggtaataaattgattttctacattccggacg 12075719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 13 - 197
Target Start/End: Complemental strand, 9929395 - 9929208
Alignment:
Q  13 attgaaggagaaaagaaagaactatgataattg--tgtcatctgaaagaccgagactctgattgtatgagtgaaatgatttagaatttgggtttttattt 110  Q
    |||||| |||| |||| ||||||||||||| ||  ||| |||| ||||||||||||||||| ||| |||||||||| ||||||| |||  |||| |||||    
T  9929395 attgaatgagataagagagaactatgataagtgattgttatctaaaagaccgagactctgactgtgtgagtgaaattatttagagtttcagtttatattt 9929296  T
Q  111 atataaaatgggtaataaattgattttctacattcgggacggatttgggt-agggttcgggatgagtacctatattcccgttacccgt 197  Q
    ||||  ||  ||||||||||||||||||||| ||| |||||  ||||||| || ||||||| || |||||||||| |  |||||||||    
T  9929295 atatggaagaggtaataaattgattttctactttcaggacgattttgggtaagagttcggggtgggtacctatatccatgttacccgt 9929208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 11 - 246
Target Start/End: Complemental strand, 25299062 - 25298825
Alignment:
Q  11 atattgaaggagaaaagaaagaactatgataatt--gtgtcatctgaaagaccgagactctgattgtatgagtgaaatgatttagaatttgggtttttat 108  Q
    |||| ||||||||||||| | || |||||||| |  |||||| ||||||||  | |||||| |   |||||||||||||||||||| |||| ||| | ||    
T  25299062 atatggaaggagaaaagagaaaattatgataaataagtgtcaactgaaagattgcgactctaacgttatgagtgaaatgatttagagtttgagttct-at 25298964  T
Q  109 ttatataaaatgggtaataaattgattttctacattcgggacggatttgggta-gggttcgggatgagtacctatattcccgttacccgtcccgtatcca 207  Q
    ||||| |||| |||| |||||||||||||| ||||| || |||| |||||||| ||||||||| ||   | |||||| ||| |||||| ||||||| ||     
T  25298963 ttataaaaaaggggtgataaattgattttcaacatttggtacgggtttgggtatgggttcggggtggacagctatatccccattacccatcccgtacccg 25298864  T
Q  208 tcttttgaaatcgagacaaacccaaacccaatcaaagtg 246  Q
    | ||||||||||  || ||||||||||||| ||||||||    
T  25298863 tgttttgaaatccggaaaaacccaaacccagtcaaagtg 25298825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 46 - 199
Target Start/End: Original strand, 36919026 - 36919179
Alignment:
Q  46 tgtcatctgaaagaccgagactctgattgtatgagtgaaatgatttagaatttgggtttttatttatataaaatgggtaataaattgattttctacattc 145  Q
    ||||||||||||| | |||||||| | ||| |||||||||||||||||| |||| |||| |||||||||||||  ||||||||| ||||||||||||| |    
T  36919026 tgtcatctgaaagtctgagactct-actgtgtgagtgaaatgatttagagtttgagtttctatttatataaaagtggtaataaactgattttctacatcc 36919124  T
Q  146 gggacggatttgggta-gggttcgggatgagtacctatattcccgttacccgtcc 199  Q
    || |||  |||||||| |||||  |||||  ||||||||| | |||||| |||||    
T  36919125 ggaacgagtttgggtatgggttaaggatggatacctatatccacgttactcgtcc 36919179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 20 - 144
Target Start/End: Complemental strand, 21714196 - 21714070
Alignment:
Q  20 gagaaaagaaagaactatgataattg--tgtcatctgaaagaccgagactctgattgtatgagtgaaatgatttagaatttgggtttttatttatataaa 117  Q
    ||||||||| |||||||||| || ||  |||||| ||| |||| |||||||| ||||| | |||||||||||||||  |||| |||| ||||||||||||    
T  21714196 gagaaaagagagaactatgagaagtgagtgtcatttgagagactgagactctaattgtgtaagtgaaatgatttagggtttgagtttctatttatataaa 21714097  T
Q  118 atgggtaataaattgattttctacatt 144  Q
    |  ||||||||||| ||||||||||||    
T  21714096 agaggtaataaattaattttctacatt 21714070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 11 - 177
Target Start/End: Original strand, 30034539 - 30034707
Alignment:
Q  11 atattgaaggagaaaagaaagaactatgataattg--tgtcatctgaaagaccgagactctgattgtatgagtgaaatgatttagaatttgggtttttat 108  Q
    |||| ||||||||||||| | |||||||||||  |  |||||  |||||||  | |||||| | | |||||||||||||||||||  ||||||||| |||    
T  30034539 atatggaaggagaaaagagaaaactatgataagcgagtgtcacttgaaagattgtgactctcactttatgagtgaaatgatttagggtttgggtttctat 30034638  T
Q  109 ttatataaaatgggtaataaattgattttctacattcgggacggatttgggtagggttcgggatgagta 177  Q
    |||||||||   |||| ||||||||||||  ||||||| |||||||||||   | ||||||||||||||    
T  30034639 ttatataaatgaggtagtaaattgatttttaacattcgagacggatttggtatgagttcgggatgagta 30034707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 134 - 237
Target Start/End: Complemental strand, 1724415 - 1724311
Alignment:
Q  134 ttttctacattcgggacggatttgggta-gggttcgggatgagtacctatattcccgttacccgtcccgtatccatcttttgaaatcgagacaaacccaa 232  Q
    |||||| |||||||||||| |||||||| ||||||||| || ||||||||||  |||||||||||||| || |||| ||||||||||| |  ||||||||    
T  1724415 ttttctgcattcgggacgggtttgggtatgggttcggggtgggtacctatataaccgttacccgtcccatacccatgttttgaaatcggggaaaacccaa 1724316  T
Q  233 accca 237  Q
    |||||    
T  1724315 accca 1724311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 45 - 222
Target Start/End: Complemental strand, 4741409 - 4741232
Alignment:
Q  45 gtgtcatctgaaagaccgagactctgattgtatgagtgaaatgatttagaatttgggtttttatttatataaaatgggtaataaattgattttctacatt 144  Q
    ||||||||||| | |  |||||| ||||||| |||| | || |||||||  |||| |||| |||||||||||||||| ||||||||||| ||| ||||||    
T  4741409 gtgtcatctgagaaattgagactatgattgtgtgagaggaacgatttagggtttgagtttctatttatataaaatggataataaattga-tttatacatt 4741311  T
Q  145 cgggacggatttgggta-gggttcgggatgagtacctatattcccgttacccgtcccgtatccatcttttgaaatcgag 222  Q
    ||| |||| |||  ||| ||||||||| || |||| ||||| || |||| ||||||| || |||| |||| ||||||||    
T  4741310 cggaacgggtttttgtatgggttcggggtgggtacttatatccctgttatccgtcccatacccatgttttaaaatcgag 4741232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 23 - 141
Target Start/End: Original strand, 39086033 - 39086152
Alignment:
Q  23 aaaagaaagaactatgataatt--gtgtcatctgaaagaccgagactctgattgtatgagtgaaatgatttagaatttgggtttttatttatataaaatg 120  Q
    |||| ||||||||||||||| |  ||||||||||||| || |||| ||||| ||| |||||||||||||||||  |||  |||| |||||||||||||      
T  39086033 aaaaaaaagaactatgataagtaagtgtcatctgaaaaactgagagtctgactgtgtgagtgaaatgatttagggtttaagtttctatttatataaaa-a 39086131  T
Q  121 ggtaataaattgattttctac 141  Q
    |||| ||||||||||||||||    
T  39086132 ggtagtaaattgattttctac 39086152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 47 - 161
Target Start/End: Complemental strand, 12505722 - 12505608
Alignment:
Q  47 gtcatctgaaagaccgagactctgattgtatgagtgaaatgatttagaatttgggtttttatttatataaaatgggtaataaattgattttctacattcg 146  Q
    |||||||||||||| |||||| |||||||  || ||||||||||||   |||  |||| ||||||||||||| ||| ||||||||||| || ||| |||     
T  12505722 gtcatctgaaagactgagactttgattgtgcgaatgaaatgatttaatgtttaagtttctatttatataaaaggggaaataaattgatgttttaccttca 12505623  T
Q  147 ggacggatttgggta 161  Q
    |||||| ||||||||    
T  12505622 ggacgggtttgggta 12505608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 11 - 151
Target Start/End: Complemental strand, 7334413 - 7334273
Alignment:
Q  11 atattgaaggagaaaagaaagaactatgataattg--tgtcatctgaaagaccgagactctgattgtatgagtgaaatgatttagaatttgggtttttat 108  Q
    |||| ||||||||||||| |||| |||||||| |   ||||| || |||||| |||||| | | ||| |||||||||||||||||| |||| |||| |||    
T  7334413 atatggaaggagaaaagagagaattatgataaataaatgtcaactaaaagactgagactttaactgtgtgagtgaaatgatttagagtttgagtttctat 7334314  T
Q  109 ttatataaaatgggtaataaattgattttctacattcgggacg 151  Q
    |  |||||||  | |||||||||||||||| ||||| ||||||    
T  7334313 t--tataaaaacgataataaattgattttcaacatttgggacg 7334273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 135 - 244
Target Start/End: Original strand, 29527803 - 29527913
Alignment:
Q  135 tttctacattcgggacggatttgggta-gggttcgggatgagtacctatattcccgttacccgtcccgtatccatcttttgaaatcgagacaaacccaaa 233  Q
    |||||||||||||   || |||||||| ||||||||| || |||| ||||| ||||||||||||| |||| || | ||||||||||| |  |||||||||    
T  29527803 tttctacattcggatagggtttgggtatgggttcggggtgggtacatatatccccgttacccgtcacgtacccgtattttgaaatcggggaaaacccaaa 29527902  T
Q  234 cccaatcaaag 244  Q
    ||| |||||||    
T  29527903 ccctatcaaag 29527913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 83 - 161
Target Start/End: Complemental strand, 40420741 - 40420663
Alignment:
Q  83 aaatgatttagaatttgggtttttatttatataaaatgggtaataaattgattttctacattcgggacggatttgggta 161  Q
    ||||||||| |  ||| ||||| ||||||||||||| |||||||||| ||||||||||||||||||  || ||||||||    
T  40420741 aaatgatttggggttttggtttctatttatataaaaggggtaataaagtgattttctacattcggggtgggtttgggta 40420663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 186
Target Start/End: Complemental strand, 9281129 - 9280941
Alignment:
Q  1 agagtgtggaatattgaaggagaaaagaaagaactatgataattg--tgtcatctgaaagaccgagactctgattgtatgagtgaaatgatttagaattt 98  Q
    ||||||||  |||| ||||||||||||| || |||||||||| ||  ||| ||||||||||  |||||||| ||| | | | || ||||||||||  |||    
T  9281129 agagtgtgagatatggaaggagaaaagagagtactatgataagtgaatgttatctgaaagattgagactctaattttgtcaatgtaatgatttagggttt 9281030  T
Q  99 gggtttttatttatataaaatgggtaataaattgattttctacattcgggacggatttgggta-gggttcgggatgagtacctatattc 186  Q
    |  ||| ||| ||||||||| || ||||||||| |||||||| |||| ||||   |||| ||| | ||||||| || ||||||||||||    
T  9281029 gaatttctatctatataaaagggataataaatttattttctatattcaggacaagtttgagtatgagttcggggtgggtacctatattc 9280941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 126 - 234
Target Start/End: Complemental strand, 19883169 - 19883060
Alignment:
Q  126 taaattgattttctacattcgggacggatttgggta-gggttcgggatgagtacctatattcccgttacccgtcccgtatccatcttttgaaatcgagac 224  Q
    |||||||||||| |||||||||||||  |||| |||  |||||||| ||  ||||||||| |||||||||| |||||||||| | |||| |||||| |      
T  19883169 taaattgattttatacattcgggacgagtttgtgtatcggttcggggtggatacctatatccccgttacccttcccgtatccgtgttttaaaatcgggga 19883070  T
Q  225 aaacccaaac 234  Q
    ||||||||||    
T  19883069 aaacccaaac 19883060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 135 - 243
Target Start/End: Original strand, 21544570 - 21544679
Alignment:
Q  135 tttctacattcgggacggatttgggta-gggttcgggatgagtacctatattcccgttacccgtcccgtatccatcttttgaaatcgagacaaacccaaa 233  Q
    ||||||| ||||||  || |||||||| ||||||||| || |||| ||||| ||| ||||| |||||||| || | ||||||||||| || ||| |||||    
T  21544570 tttctaccttcgggtagggtttgggtatgggttcggggtgggtacatatatccccattacctgtcccgtacccgtattttgaaatcgggaaaaatccaaa 21544669  T
Q  234 cccaatcaaa 243  Q
    ||||||||||    
T  21544670 cccaatcaaa 21544679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 80 - 145
Target Start/End: Complemental strand, 35304675 - 35304611
Alignment:
Q  80 gtgaaatgatttagaatttgggtttttatttatataaaatgggtaataaattgattttctacattc 145  Q
    ||||||||||||||| |||| |||| | ||||||||||| ||||||||||||||||| ||||||||    
T  35304675 gtgaaatgatttagagtttgagtttctttttatataaaa-gggtaataaattgatttcctacattc 35304611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 135 - 206
Target Start/End: Original strand, 18423581 - 18423653
Alignment:
Q  135 tttctacattcgggacggatttgggta-gggttcgggatgagtacctatattcccgttacccgtcccgtatcc 206  Q
    ||||||||||||||  || ||| |||| ||||||||||||||||| ||||| | |||||||||||||||||||    
T  18423581 tttctacattcgggtagggtttaggtatgggttcgggatgagtacatatatcctcgttacccgtcccgtatcc 18423653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 134 - 200
Target Start/End: Complemental strand, 5902719 - 5902652
Alignment:
Q  134 ttttctacattcgggacggatttgggta-gggttcgggatgagtacctatattcccgttacccgtccc 200  Q
    |||| |||||| ||||||| |||||||| ||||||||| || |||||||||| |||||||||||||||    
T  5902719 ttttttacatttgggacgggtttgggtatgggttcggggtgggtacctatatacccgttacccgtccc 5902652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 134 - 200
Target Start/End: Complemental strand, 6382377 - 6382310
Alignment:
Q  134 ttttctacattcgggacggatttgggta-gggttcgggatgagtacctatattcccgttacccgtccc 200  Q
    |||| |||||| ||||||| |||||||| ||||||||| || |||||||||| |||||||||||||||    
T  6382377 ttttttacatttgggacgggtttgggtatgggttcggggtgggtacctatatacccgttacccgtccc 6382310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 134 - 200
Target Start/End: Original strand, 7608960 - 7609027
Alignment:
Q  134 ttttctacattcgggacggatttgggta-gggttcgggatgagtacctatattcccgttacccgtccc 200  Q
    |||| |||||| ||||||| |||||||| ||||||||| || |||||||||| |||||||||||||||    
T  7608960 ttttttacatttgggacgggtttgggtatgggttcggggtgggtacctatatacccgttacccgtccc 7609027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 78 - 244
Target Start/End: Original strand, 16575046 - 16575213
Alignment:
Q  78 gagtgaaatgatttagaatttgggtttttatttatataaaatgggtaataaattgattttctacattcgggacggatttgggta-gggttcgggatgagt 176  Q
    |||||||||||||||  ||||| |||| ||||||||| ||| |||||||||||| ||||| ||||||   ||||  ||||||||  |||||||  || ||    
T  16575046 gagtgaaatgatttatgatttgagtttctatttatattaaaagggtaataaattaattttttacatttaagacgagtttgggtataggttcggagtgggt 16575145  T
Q  177 acctatattcccgttacccgtcccgtatccatcttttgaaatcgagacaaacccaaacccaatcaaag 244  Q
    || ||||| | ||||| || ||||||| ||   |||| ||||||||  | |||||||| |||||||||    
T  16575146 acttatatcctcgttatccatcccgtacccgcgttttaaaatcgaggaatacccaaactcaatcaaag 16575213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 45 - 88
Target Start/End: Complemental strand, 24475008 - 24474965
Alignment:
Q  45 gtgtcatctgaaagaccgagactctgattgtatgagtgaaatga 88  Q
    |||||||||||||||| |||||| ||||||||||||||||||||    
T  24475008 gtgtcatctgaaagactgagactttgattgtatgagtgaaatga 24474965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 104 - 151
Target Start/End: Original strand, 43553406 - 43553453
Alignment:
Q  104 tttatttatataaaatgggtaataaattgattttctacattcgggacg 151  Q
    ||||| ||||||||| ||||||||||||||||||| ||||||||||||    
T  43553406 tttatctatataaaaggggtaataaattgattttcaacattcgggacg 43553453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 134 - 200
Target Start/End: Original strand, 44317525 - 44317592
Alignment:
Q  134 ttttctacattcgggacggatttgggta-gggttcgggatgagtacctatattcccgttacccgtccc 200  Q
    |||| |||||| ||||||| |||||||| ||||||||| || |||||||||| |||||||||||||||    
T  44317525 ttttttacatttgggacgggtttgggtatgggttcggggtgggtacctatatacccgttacccgtccc 44317592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 101 - 152
Target Start/End: Complemental strand, 50376489 - 50376438
Alignment:
Q  101 gtttttatttatataaaatgggtaataaattgattttctacattcgggacgg 152  Q
    |||| ||||||||||||||||  |||||||||||||||||||||||| ||||    
T  50376489 gtttctatttatataaaatggaaaataaattgattttctacattcggaacgg 50376438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 135 - 235
Target Start/End: Original strand, 45065240 - 45065341
Alignment:
Q  135 tttctacattcgggacggatttgggtagg-gttcgggatgagtacctatattcccgttacccgtcccgtatccatcttttgaaatcgagacaaacccaaa 233  Q
    ||||||||||||||  || |||||||| | |||||||||| |||| ||||| || ||||| ||||||||| || | |||||||||||||  ||||| |||    
T  45065240 tttctacattcgggtagggtttgggtatgcgttcgggatgggtacatatatccctgttactcgtcccgtacccgtattttgaaatcgaggaaaacctaaa 45065339  T
Q  234 cc 235  Q
    ||    
T  45065340 cc 45065341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 37926416 - 37926560
Alignment:
Q  1 agagtgtggaatattgaaggagaaaagaaagaactatgataattg--tgtcatctgaaagaccgagactctgattgtatgagtgaaatgatttagaattt 98  Q
    ||||||||  |||| ||||||||||| | ||||||||||||| ||  |||||||  |||||| |||||| | | ||| ||||| |||||||||| | |||    
T  37926416 agagtgtgagatatggaaggagaaaatagagaactatgataagtgactgtcatc--aaagactgagactttaactgtgtgagttaaatgatttaaagttt 37926513  T
Q  99 gggtttttatttatataaaatgggtaataaattgattttctacattc 145  Q
    | ||||  ||| |||| ||| || ||||||||| |||| ||||||||    
T  37926514 gagtttcaattgatatgaaagggataataaattaatttactacattc 37926560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 133 - 200
Target Start/End: Complemental strand, 47550459 - 47550391
Alignment:
Q  133 attttctacattcgggacggatttgggta-gggttcgggatgagtacctatattcccgttacccgtccc 200  Q
    ||||| |||||| ||||||| |||||||| ||||||||| || |||||||||| || ||||||||||||    
T  47550459 attttttacatttgggacgggtttgggtatgggttcggggtgggtacctatatacctgttacccgtccc 47550391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 150
Target Start/End: Original strand, 55783438 - 55783510
Alignment:
Q  78 gagtgaaatgatttagaatttgggtttttatttatataaaatgggtaataaattgattttctacattcgggac 150  Q
    |||||||||||||||| ||||| |||| |||| ||||||||  |||||| || |||||||||| ||| |||||    
T  55783438 gagtgaaatgatttaggatttgagtttctattcatataaaagaggtaatgaagtgattttctatatttgggac 55783510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 150
Target Start/End: Original strand, 55847620 - 55847692
Alignment:
Q  78 gagtgaaatgatttagaatttgggtttttatttatataaaatgggtaataaattgattttctacattcgggac 150  Q
    |||||||||||||||| ||||| |||| |||| ||||||||  |||||| || |||||||||| ||| |||||    
T  55847620 gagtgaaatgatttaggatttgagtttctattcatataaaagaggtaatgaagtgattttctatatttgggac 55847692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 101 - 198
Target Start/End: Original strand, 10302040 - 10302139
Alignment:
Q  101 gtttttatttatataaaatg-ggtaataaattgattttctacattcgggacggatttgggta-gggttcgggatgagtacctatattcccgttacccgtc 198  Q
    |||| ||||||||||||| | ||||| ||| | ||||| |||||| ||||||||| |||||| ||||||||| || |||| ||||  |||||||||||||    
T  10302040 gtttctatttatataaaaggtggtaaaaaagtaattttttacatttgggacggatatgggtatgggttcggggtgggtacatataaccccgttacccgtc 10302139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 134 - 200
Target Start/End: Complemental strand, 11122974 - 11122907
Alignment:
Q  134 ttttctacattcgggacggatttgggta-gggttcgggatgagtacctatattcccgttacccgtccc 200  Q
    |||| |||||| ||||||| |||| ||| ||||||||| || |||||||||| |||||||||||||||    
T  11122974 ttttttacatttgggacgggtttgagtatgggttcggggtgggtacctatatacccgttacccgtccc 11122907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 134 - 220
Target Start/End: Original strand, 26564821 - 26564908
Alignment:
Q  134 ttttctacattcgggacggatttgggtagggtt-cgggatgagtacctatattcccgttacccgtcccgtatccatcttttgaaatcg 220  Q
    |||||| |||| ||||||| |||||||| |||| |||| || |||||||||| ||||||||||||||| || ||   |||||||||||    
T  26564821 ttttctgcatttgggacgggtttgggtatggtttcggggtgggtacctatatacccgttacccgtcccatacccgcgttttgaaatcg 26564908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 74 - 137
Target Start/End: Complemental strand, 43351540 - 43351477
Alignment:
Q  74 gtatgagtgaaatgatttagaatttgggtttttatttatataaaatgggtaataaattgatttt 137  Q
    |||||| |||||||||| ||  |||| |||||||||||| |||||  |||||||||||||||||    
T  43351540 gtatgaatgaaatgattcagggtttgagtttttatttatgtaaaagaggtaataaattgatttt 43351477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 134 - 200
Target Start/End: Complemental strand, 55826728 - 55826661
Alignment:
Q  134 ttttctacattcgggacggatttgggta-gggttcgggatgagtacctatattcccgttacccgtccc 200  Q
    |||| |||||| ||||||| ||||| || ||||||||| || |||||||||| |||||||||||||||    
T  55826728 ttttttacatttgggacgggtttggatatgggttcggggtgggtacctatatacccgttacccgtccc 55826661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 220
Target Start/End: Complemental strand, 7985226 - 7985143
Alignment:
Q  134 ttttctacattcgggacggatttgggta-gggttcgggatgagtacctatattcccgttacccgtcccgtatccatcttttgaaatcg 220  Q
    |||||| |||||||||||| |||||||| ||||||||||||||||| || ||    |||| ||||||| || |||| |||||||||||    
T  7985226 ttttctgcattcgggacgggtttgggtatgggttcgggatgagtacatacat----gttatccgtcccatacccatgttttgaaatcg 7985143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 79 - 145
Target Start/End: Complemental strand, 19549069 - 19549003
Alignment:
Q  79 agtgaaatgatttagaatttgggtttttatttatataaaatgggtaataaattgattttctacattc 145  Q
    ||||||||||||||   |||| |||||| |||||||||||||| |||| |||||| ||| |||||||    
T  19549069 agtgaaatgatttaaggtttgagtttttgtttatataaaatggataatgaattgaatttttacattc 19549003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 151
Target Start/End: Complemental strand, 24474599 - 24474529
Alignment:
Q  81 tgaaatgatttagaatttgggtttttatttatataaaatgggtaataaattgattttctacattcgggacg 151  Q
    |||||||| |||| || || |||| ||||||||||||| || ||| || |||||||| |||||||||||||    
T  24474599 tgaaatgaattaggatatgagtttctatttatataaaagggataaaaatttgattttttacattcgggacg 24474529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 220
Target Start/End: Original strand, 32585484 - 32585566
Alignment:
Q  139 tacattcgggacggatttgggta-gggttcgggatgagtacctatattcccgttacccgtcccgtatccatcttttgaaatcg 220  Q
    |||||| ||||||| |||||||| |||||| || || |||||||||| ||||||||| ||||| || || | |||||||||||    
T  32585484 tacatttgggacgggtttgggtatgggttcagggtgggtacctatatacccgttacctgtcccatacccgtgttttgaaatcg 32585566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 134 - 237
Target Start/End: Original strand, 11028063 - 11028167
Alignment:
Q  134 ttttctacattcgggacggatttgggtagg-gttcgggatgagtacctatattcccgttacccgtcccgtatccatcttttgaaatcgagacaaacccaa 232  Q
    |||| |||||| ||||| | |||||||| | ||||||| || |||||||||| ||||||||||||||| || || | |||||| |||| |  |||||||     
T  11028063 ttttttacatttgggacaggtttgggtatgagttcggggtgggtacctatatacccgttacccgtcccatacccgtgttttgagatcggggaaaacccat 11028162  T
Q  233 accca 237  Q
    |||||    
T  11028163 accca 11028167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 133 - 200
Target Start/End: Original strand, 19534444 - 19534512
Alignment:
Q  133 attttctacattcgggacggatttgggta-gggttcgggatgagtacctatattcccgttacccgtccc 200  Q
    |||||||||||||| ||||| |||||||| | ||||| | || |||||||||| || ||||||||||||    
T  19534444 attttctacattcgtgacgggtttgggtatgagttcgaggtgggtacctatatacctgttacccgtccc 19534512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 77 - 157
Target Start/End: Original strand, 37384206 - 37384285
Alignment:
Q  77 tgagtgaaatgatttagaatttgggtttttatttatataaaatgggtaataaattgattttctacattcgggacggatttg 157  Q
    |||||||||||||||||  ||||   || ||||||||||||| || ||||||||||| |||||| ||| ||||||| ||||    
T  37384206 tgagtgaaatgatttagggtttgaacttctatttatataaaagggataataaattga-tttctatatttgggacgggtttg 37384285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 159 - 234
Target Start/End: Complemental strand, 41915076 - 41915000
Alignment:
Q  159 gtagggttcggg-atgagtacctatattcccgttacccgtcccgtatccatcttttgaaatcgagacaaacccaaac 234  Q
    |||||||| ||| ||| |||| ||||| |||||||||| ||||||| |||| ||||||||||| |  ||||||||||    
T  41915076 gtagggtttgggtatgggtacatatatccccgttacccttcccgtacccatattttgaaatcggggaaaacccaaac 41915000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 138 - 237
Target Start/End: Original strand, 47103732 - 47103832
Alignment:
Q  138 ctacattcgggacggatttgggta-gggttcgggatgagtacctatattcccgttacccgtcccgtatccatcttttgaaatcgagacaaacccaaaccc 236  Q
    |||||||||||  || |||||||| ||||||||| || |||| ||||| | ||||||||| |||||| || | ||||||||| | |  ||||||||||||    
T  47103732 ctacattcgggtagggtttgggtatgggttcggggtgggtacatatatccgcgttacccgccccgtacccgtattttgaaattggggaaaacccaaaccc 47103831  T
Q  237 a 237  Q
    |    
T  47103832 a 47103832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 133 - 220
Target Start/End: Original strand, 48459470 - 48459558
Alignment:
Q  133 attttctacattcgggacggatttgggta-gggttcgggatgagtacctatattcccgttacccgtcccgtatccatcttttgaaatcg 220  Q
    ||||| |||||| |||| || | |||||| ||||||||| || |||||||||| || ||||||||| || || |||| |||||||||||    
T  48459470 attttttacatttgggatgggtatgggtatgggttcggggtgggtacctatatacctgttacccgttccatacccatgttttgaaatcg 48459558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 82; Significance: 8e-39; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 11 - 244
Target Start/End: Original strand, 9402448 - 9402683
Alignment:
Q  11 atattgaaggagaaaagaaagaactatgataattg--tgtcatctgaaagaccgagactctgattgtatgagtgaaatgatttagaatttgggtttttat 108  Q
    |||| ||||||||||||| ||||||||||||| ||  ||| || ||||||||| ||||||||| ||| |||||||||||||||||  ||||||||| |||    
T  9402448 atatggaaggagaaaagagagaactatgataagtgagtgtgatatgaaagacctagactctgactgtgtgagtgaaatgatttagggtttgggtttctat 9402547  T
Q  109 ttatataaaatgggtaataaattgattttctacattcgggacggatttgggta-gggttcgggatgagtacctatattcccgttacccgtcccgtatcca 207  Q
    |||||||||  ||||| ||||||||||||||||||||| ||| | |||| ||| ||||||||| ||   |||||||| |  ||||||||||| ||| |||    
T  9402548 ttatataaatggggtactaaattgattttctacattcgagacaggtttgagtatgggttcggg-tggacacctatatccatgttacccgtcctgtaccca 9402646  T
Q  208 tcttttgaaatcgagacaaacccaaacccaatcaaag 244  Q
    | ||||||||||| |  ||||||||| ||| ||||||    
T  9402647 tgttttgaaatcggggaaaacccaaatccagtcaaag 9402683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 11 - 220
Target Start/End: Original strand, 20348924 - 20349135
Alignment:
Q  11 atattgaaggagaaaagaaagaactatgataatt--gtgtcatctgaaagaccgagactctgattgtatgagtgaaatgatttagaatttgggtttttat 108  Q
    |||| ||||||||||||| ||||||||||||| |  |||||||||||||| || ||||||||| |||  ||||||| ||||||||  |||| |||| |||    
T  20348924 atatggaaggagaaaagagagaactatgataagtaagtgtcatctgaaagtccaagactctgagtgt--gagtgaagtgatttagggtttgagtttatat 20349021  T
Q  109 tt-atataaaatgggtaataaattgattttctacattcgggacggatttgggta-gggttcgggatgagtacctatattcccgttacccgtcccgtatcc 206  Q
    || |||||||| | |||||||||| ||||| |||||| |  ||||||||||||| | ||||||| || |||||||||| |||||||| |||||| || ||    
T  20349022 tttatataaaaagtgtaataaattaattttttacatttgcaacggatttgggtatgagttcggggtgggtacctatatccccgttactcgtcccataccc 20349121  T
Q  207 atcttttgaaatcg 220  Q
     | |||||||||||    
T  20349122 gtgttttgaaatcg 20349135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 11 - 193
Target Start/End: Complemental strand, 34346243 - 34346049
Alignment:
Q  11 atattgaaggagaaaagaaagaactatgataattg--tgtcatctgaaagaccgagactctgattgtatgagtgaaatgatttagaatttgggtttttat 108  Q
    |||| |||| |||||||| ||||||||||||| ||  | |||||| |||||| |||||||||| ||| |||||||||||||||||  ||||||||| |||    
T  34346243 atatggaagaagaaaagatagaactatgataagtgactctcatctaaaagactgagactctgactgtgtgagtgaaatgatttagggtttgggtttctat 34346144  T
Q  109 ttat---------ataaaatgggtaataaattgattttctacattcgggacggatttgggta-gggttcgggatgagtacctatattcccgttac 193  Q
    ||||         |||||| | |||||||||| ||||||||||||||| |||||||||||||  | |||||| || |||||||||| ||||||||    
T  34346143 ttatataatttatataaaaggagtaataaattaattttctacattcggaacggatttgggtatagattcggggtgggtacctatatccccgttac 34346049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 21 - 184
Target Start/End: Complemental strand, 1948010 - 1947844
Alignment:
Q  21 agaaaagaaagaactatgataattg--tgtcatctgaaagaccgagactctgattgtatgagtgaaatgatttagaatttgggtttttatttatataaaa 118  Q
    ||||||||  |||||||||||| ||  ||||||||||||| | || ||||||| ||| |||||  ||||| ||||  ||||| |||||||||||||||||    
T  1948010 agaaaagagggaactatgataagtgagtgtcatctgaaagtcagatactctgactgtgtgagtataatgacttagggtttggatttttatttatataaaa 1947911  T
Q  119 tgggtaataaattgattttctacattcgggacggatttgggta-gggttcgggatgagtacctatat 184  Q
     ||||||||||||||||||||||||| || |||  |||| ||| ||||| | ||||||||| |||||    
T  1947910 ggggtaataaattgattttctacatttggaacgagtttgagtatgggtttgagatgagtacatatat 1947844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 107 - 237
Target Start/End: Original strand, 13769029 - 13769160
Alignment:
Q  107 atttatataaaatgggtaataaattgattttctacattcgggacggatttgggta-gggttcgggatgagtacctatattcccgttacccgtcccgtatc 205  Q
    |||||||||||| | |||||||||||||||||||||||| |||||| ||||| || |||||| || || ||||||||||  |||||||||||||| || |    
T  13769029 atttatataaaaggagtaataaattgattttctacattcaggacgggtttggatatgggttctgggtgggtacctatatgtccgttacccgtcccatacc 13769128  T
Q  206 catcttttgaaatcgagacaaacccaaaccca 237  Q
    ||| ||||||| ||| |  ||||| |||||||    
T  13769129 catgttttgaagtcggggaaaaccgaaaccca 13769160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 32 - 198
Target Start/End: Original strand, 29341131 - 29341305
Alignment:
Q  32 aactatgataattg--tgtcatctgaaagaccgagactctgattgtatgagtgaaatgatttagaatttgggtttttatttatataaa--atgggtaata 127  Q
    ||||||||||| ||  ||||||||||||||  |||| ||||| ||||| ||||||||||| |||  ||||||||| |||||||||| |  | |||||| |    
T  29341131 aactatgataagtgattgtcatctgaaagattgagaatctgactgtataagtgaaatgatatagggtttgggtttctatttatatagataaggggtaaaa 29341230  T
Q  128 aat---tgattttctacattcgggacggatttgggta-gggttcgggatgagtacctatattcccgttacccgtc 198  Q
    ||    |||||||||||||||||||||| |||||||| | ||| |||||| ||||||||||  ||||||||||||    
T  29341231 aaaaaatgattttctacattcgggacgggtttgggtatgagtttgggatgggtacctatatctccgttacccgtc 29341305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 109 - 243
Target Start/End: Original strand, 32959820 - 32959954
Alignment:
Q  109 ttatataaaatgggtaataaattgattttctacattcgggacggatttgggtagggttcgggatgagtacctatattcccgttacccgtcccgtatccat 208  Q
    |||||||| | |||||||||||||||||||||||||   |||||||||||   ||||||||| ||  ||||||||| |||||||||||| ||||| || |    
T  32959820 ttatataataggggtaataaattgattttctacatttatgacggatttggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgt 32959919  T
Q  209 cttttgaaatcgagacaaacccaaacccaatcaaa 243  Q
     |||||||||   |  |||||||||||||||||||    
T  32959920 gttttgaaattagggaaaacccaaacccaatcaaa 32959954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 88 - 220
Target Start/End: Complemental strand, 256643 - 256509
Alignment:
Q  88 atttagaatttgggtttttattt-atataaaatgggtaataaattgattttctacattcgggacggatttgggta-gggttcgggatgagtacctatatt 185  Q
    ||||||| |||| |||| ||||| | |||||| ||||| |||||||||||||||||||  ||| || |||||||| ||||| ||| || ||||||||||     
T  256643 atttagagtttgtgtttctattttaaataaaaggggtagtaaattgattttctacatttaggaggggtttgggtatgggtttggggtgggtacctatatg 256544  T
Q  186 cccgttacccgtcccgtatccatcttttgaaatcg 220  Q
    ||| ||||||||| |||| |||| |||||||||||    
T  256543 cccattacccgtctcgtacccatgttttgaaatcg 256509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 2126860 - 2126699
Alignment:
Q  1 agagtgtggaatattgaaggagaaaagaaagaactatgataattg--tgtcatctgaaagaccgagactctgattgtatgagtgaaatgatttagaattt 98  Q
    ||||||||  |||| ||||||||||||| ||||||||||||| ||  ||| |||| ||| ||||||||| | | | | | |||||||||||||| |  ||    
T  2126860 agagtgtgagatatggaaggagaaaagagagaactatgataactgagtgtgatctaaaataccgagactttaactctgtaagtgaaatgatttaaagctt 2126761  T
Q  99 gggtttttatttatataaaatgggtaataaattgattttctacattcgggacggatttgggt 160  Q
    | |||| ||| ||||||||| |||||||||| | ||||||| |||||| || ||||||||||    
T  2126760 gagtttctatctatataaaaggggtaataaacttattttcttcattcgagatggatttgggt 2126699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 152 - 237
Target Start/End: Complemental strand, 28079782 - 28079696
Alignment:
Q  152 gatttgggta-gggttcgggatgagtacctatattcccgttacccgtcccgtatccatcttttgaaatcgagacaaacccaaaccca 237  Q
    |||||||||| ||||||||| || |||||||||| |||||||||||||||||| |||| ||||||||||| |  |||||||||||||    
T  28079782 gatttgggtatgggttcggggtgggtacctatatccccgttacccgtcccgtacccatgttttgaaatcggggaaaacccaaaccca 28079696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 77 - 145
Target Start/End: Original strand, 14321794 - 14321862
Alignment:
Q  77 tgagtgaaatgatttagaatttgggtttttatttatataaaatgggtaataaattgattttctacattc 145  Q
    ||||||||||||||||  ||||| |||| |||||||||||||| ||||||||||| |||||||||||||    
T  14321794 tgagtgaaatgatttaagatttgagtttctatttatataaaataggtaataaattaattttctacattc 14321862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 134 - 238
Target Start/End: Original strand, 32053072 - 32053177
Alignment:
Q  134 ttttctacattcgggacggatttgggta-gggttcgggatgagtacctatattcccgttacccgtcccgtatccatcttttgaaatcgagacaaacccaa 232  Q
    |||| ||||||  |||||| |||||||| ||||| ||| || |||| ||||| ||||||||||||||| ||||||| ||||||||||| |  |||||||     
T  32053072 ttttttacattttggacgggtttgggtatgggtttggggtgggtacatatatacccgttacccgtcccatatccatgttttgaaatcggggaaaacccat 32053171  T
Q  233 acccaa 238  Q
    ||||||    
T  32053172 acccaa 32053177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 133 - 237
Target Start/End: Original strand, 32853827 - 32853932
Alignment:
Q  133 attttctacattcgggacggatttgggta-gggttcgggatgagtacctatattcccgttacccgtcccgtatccatcttttgaaatcgagacaaaccca 231  Q
    ||||| |||||| ||||||| |||||||| ||||||||| || |||||||||| ||||||||||||||| || || | |||||| |||| |  |||||||    
T  32853827 attttttacatttgggacgggtttgggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgttttgagatcggggaaaaccca 32853926  T
Q  232 aaccca 237  Q
     |||||    
T  32853927 taccca 32853932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 32 - 244
Target Start/End: Complemental strand, 8321003 - 8320788
Alignment:
Q  32 aactatgataattg--tgtcatctgaaagaccgagactctgattgtatgagtgaaatgatttagaatttgggtttttatttatataaaatgggtaataaa 129  Q
    ||||||||||| ||  |||| ||||||||||||||||||||| ||| | |||||||||||||||  |||  |||| ||||||  ||||  | |||||||     
T  8321003 aactatgataagtgaatgtcgtctgaaagaccgagactctgactgtgtaagtgaaatgatttagggtttaagtttctatttacgtaaatggagtaataag 8320904  T
Q  130 ttgattttctacattcgggacggatttgggta-gggttcgggatgagtacctatattcccgttacccgtcccgtatccatcttttgaaatcgagacaaac 228  Q
    |||||||| | ||||| | |||| | |||||| ||||||||| |   || |||||| || |||||| || ||||| || | ||||||||| | |  ||||    
T  8320903 ttgattttttgcattcagaacgggtctgggtatgggttcggggtcgatatctatatccctgttacctgttccgtacccgtgttttgaaattggggaaaac 8320804  T
Q  229 ccaaacccaatcaaag 244  Q
    ||||||| | ||||||    
T  8320803 ccaaacctagtcaaag 8320788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 133 - 220
Target Start/End: Original strand, 24225681 - 24225769
Alignment:
Q  133 attttctacattcgggacggatttgggta-gggttcgggatgagtacctatattcccgttacccgtcccgtatccatcttttgaaatcg 220  Q
    ||||| |||||| ||||||| |||||| | ||||||||| || |||||||||| ||||||||||||||| ||||| | |||||| ||||    
T  24225681 attttttacatttgggacgggtttgggcatgggttcggggtgggtacctatatacccgttacccgtcccatatccgtgttttgagatcg 24225769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 133 - 243
Target Start/End: Complemental strand, 24602961 - 24602850
Alignment:
Q  133 attttctacattcgggacggatttgggta-gggttcgggatgagtacctatattcccgttacccgtcccgtatccatcttttgaaatcgagacaaaccca 231  Q
    |||||||||||||| || || |||||||| ||||||||| || ||| |||||| || |||||||||| | || |||| ||||||||||  |  |||||||    
T  24602961 attttctacattcgtgatgggtttgggtatgggttcggggtgggtatctatatacctgttacccgtcacatacccatgttttgaaatctgggaaaaccca 24602862  T
Q  232 aacccaatcaaa 243  Q
    |||||| |||||    
T  24602861 aacccagtcaaa 24602850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 57 - 150
Target Start/End: Complemental strand, 34179190 - 34179096
Alignment:
Q  57 agaccgagactctgattgtatgagtgaaatgatttagaatttgggtttttatttatataaaatg-ggtaataaattgattttctacattcgggac 150  Q
    |||||||||||||||  ||  || | |||||||||||  |||| |||| ||||||||||||| | |||||||||||||||||| |||||| ||||    
T  34179190 agaccgagactctgaccgtgcgaataaaatgatttagggtttgagtttctatttatataaaaagaggtaataaattgattttcaacattcaggac 34179096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 147 - 219
Target Start/End: Complemental strand, 14410946 - 14410873
Alignment:
Q  147 ggacggatttgggta-gggttcgggatgagtacctatattcccgttacccgtcccgtatccatcttttgaaatc 219  Q
    |||||| |||||||| ||||||||| || |||||||||| ||||||||||||||| || || | ||||||||||    
T  14410946 ggacgggtttgggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgttttgaaatc 14410873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 134 - 237
Target Start/End: Complemental strand, 5863487 - 5863383
Alignment:
Q  134 ttttctacattcgggacggatttgggta-gggttcgggatgagtacctatattcccgttacccgtcccgtatccatcttttgaaatcgagacaaacccaa 232  Q
    |||| |||||| ||||||| |||||||| ||||||| | || ||| |||||| ||||||||||||||| || || | ||||||||||| |  |||||||     
T  5863487 ttttttacatttgggacgggtttgggtatgggttcgaggtgggtatctatatacccgttacccgtcccatacccgtgttttgaaatcggggaaaacccat 5863388  T
Q  233 accca 237  Q
    |||||    
T  5863387 accca 5863383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 134 - 200
Target Start/End: Original strand, 27534668 - 27534735
Alignment:
Q  134 ttttctacattcgggacggatttgggtaggg-ttcgggatgagtacctatattcccgttacccgtccc 200  Q
    |||| |||||| ||||||| |||||||| || |||||| || |||||||||| |||||||||||||||    
T  27534668 ttttttacatttgggacgggtttgggtatggattcggggtgggtacctatatacccgttacccgtccc 27534735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 151
Target Start/End: Complemental strand, 21877201 - 21877096
Alignment:
Q  45 gtgtcatctgaaagaccgagactctgattgtatgagtgaaatgatttagaatttgggtttttatttatataaaatgggtaataaattgattttctacatt 144  Q
    ||||| ||||| | || |||||| ||| ||||||||||||||| ||||| |||| ||||| ||||| ||| ||   ||||||| ||| ||||||||||||    
T  21877201 gtgtcgtctgacacactgagactttgactgtatgagtgaaatggtttaggatttaggtttatattt-tattaatatggtaatacattaattttctacatt 21877103  T
Q  145 cgggacg 151  Q
     ||||||    
T  21877102 tgggacg 21877096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 141 - 237
Target Start/End: Original strand, 2367317 - 2367414
Alignment:
Q  141 cattcgggacggatttgggta-gggttcgggatgagtacctatattcccgttacccgtcccgtatccatcttttgaaatcgagacaaacccaaaccca 237  Q
    |||| ||||||| |||||||| ||||||||| || |||| ||||| ||||||||||||||| || || | |||||| |||| |  ||||||| |||||    
T  2367317 catttgggacgggtttgggtatgggttcggggtgggtacttatatacccgttacccgtcccatacccgtgttttgagatcggggaaaacccataccca 2367414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 133 - 237
Target Start/End: Original strand, 27738755 - 27738860
Alignment:
Q  133 attttctacattcgggacggatttgggta-gggttcgggatgagtacctatattcccgttacccgtcccgtatccatcttttgaaatcgagacaaaccca 231  Q
    ||||| |||||| ||||||| |||||||| ||||||||| || |||| |||||  | |||||||||||| || || | ||||||||||| |  |||||||    
T  27738755 attttttacatttgggacgggtttgggtatgggttcggggtgggtacatatatatctgttacccgtcccatacccgtgttttgaaatcggggaaaaccca 27738854  T
Q  232 aaccca 237  Q
     |||||    
T  27738855 taccca 27738860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 135 - 243
Target Start/End: Complemental strand, 29199988 - 29199879
Alignment:
Q  135 tttctacattcgggacggatttgggta-gggttcgggatgagtacctatattcccgttacccgtcccgtatccatcttttgaaatcgagacaaacccaaa 233  Q
    ||||||||||||||  |  |||||||| ||||||||| |   ||| ||||| || ||||||||||||||| || | ||||||||||| |  ||| |||||    
T  29199988 tttctacattcgggtagagtttgggtatgggttcggggtagatacatatatccctgttacccgtcccgtacccgtattttgaaatcggggaaaatccaaa 29199889  T
Q  234 cccaatcaaa 243  Q
    ||||||||||    
T  29199888 cccaatcaaa 29199879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 133 - 200
Target Start/End: Complemental strand, 12678199 - 12678131
Alignment:
Q  133 attttctacattcgggacggatttgggta-gggttcgggatgagtacctatattcccgttacccgtccc 200  Q
    |||||||  ||||||||||| |||||||| |||||| || || |||||||||| ||| |||||||||||    
T  12678199 attttctcaattcgggacgggtttgggtatgggttcagggtgggtacctatataccctttacccgtccc 12678131  T

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Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 133 - 220
Target Start/End: Original strand, 32532523 - 32532611
Alignment:
Q  133 attttctacattcgggacggatttgggta-gggttcgggatgagtacctatattcccgttacccgtcccgtatccatcttttgaaatcg 220  Q
    ||||| |||||| ||||||| | || ||| ||||||||| || |||||||||| ||| ||||||||||| || || | |||||||||||    
T  32532523 attttttacatttgggacgggtatgagtatgggttcggggtgggtacctatatacccattacccgtcccatacccgtgttttgaaatcg 32532611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 78; Significance: 2e-36; HSPs: 31)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 11 - 220
Target Start/End: Original strand, 28345350 - 28345562
Alignment:
Q  11 atattgaaggagaaaagaaagaactatgataattg--tgtcatctgaaagaccgagactctgattgtatgagtgaaatgatttagaatttgggtttttat 108  Q
    |||| |||||||| |||| ||||||||||||| ||  |||||||||||| || |||||| ||| ||| |||||||||||||||||||||| ||||| |||    
T  28345350 atatggaaggagataagagagaactatgataagtgagtgtcatctgaaatactgagactatgactgtgtgagtgaaatgatttagaatttcggtttctat 28345449  T
Q  109 ttatataaaatgggtaataaattgattttctacattcgggacggatttgggta-gggttcgggatgagtacctatattcccgttacccgtcccgtatcca 207  Q
    |||||||||| |||||||| ||| ||||||||||||| ||||   |||||||| ||||||||| || || ||||||| | |||||||| ||| ||| ||     
T  28345450 ttatataaaaggggtaatatatttattttctacattcaggacaagtttgggtatgggttcggggtgggtgcctatatcctcgttacccatcctgtacccg 28345549  T
Q  208 tcttttgaaatcg 220  Q
    | ||||| |||||    
T  28345550 tgttttggaatcg 28345562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 184
Target Start/End: Original strand, 36274892 - 36275077
Alignment:
Q  1 agagtgtggaatattgaaggagaaaagaaagaactatgataattg--tgtcatctgaaagaccgagactctgattgtatgagtgaaatgatttagaattt 98  Q
    ||||||||  |||| ||||||||||||  || |||||||||| ||  |||||||||||||||||||||| ||| ||| |||||||||||||||||   ||    
T  36274892 agagtgtgagatatggaaggagaaaagggaggactatgataagtgagtgtcatctgaaagaccgagactttgactgtgtgagtgaaatgatttag-ggtt 36274990  T
Q  99 gggtttttatttatataaaatgggtaataaattgattttctacattcgggacggatttgggta-gggttcgggatgagtacctatat 184  Q
    |||||| ||||||||||||| || || |||||||||||| ||||||||||||   ||| |||| ||||||||| ||||||| |||||    
T  36274991 gggtttctatttatataaaagggatagtaaattgattttttacattcgggacatgtttaggtatgggttcggggtgagtacttatat 36275077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 11 - 166
Target Start/End: Original strand, 29918466 - 29918623
Alignment:
Q  11 atattgaaggagaaaagaaagaactatgataatt--gtgtcatctgaaagaccgagactctgattgtatgagtgaaatgatttagaatttgggtttttat 108  Q
    |||| ||||| ||||||| ||||||||||||| |  |||||||||||||||  |||||||| | ||| |||||||||||||||||  |||| |||| |||    
T  29918466 atatggaaggcgaaaagatagaactatgataactaagtgtcatctgaaagattgagactctaactgtgtgagtgaaatgatttagggtttgagtttctat 29918565  T
Q  109 ttatataaaatgggtaataaattgattttctacattcgggacggatttgggtagggtt 166  Q
    ||||||||||  ||||||||||||||||| |||||| ||||||| |||| ||| ||||    
T  29918566 ttatataaaagaggtaataaattgattttttacatttgggacgggtttgtgtatggtt 29918623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 11 - 220
Target Start/End: Complemental strand, 8545578 - 8545366
Alignment:
Q  11 atattgaaggagaaaagaaagaactatgataattg--tgtcatctgaaagaccgagactctgattgtatgagtgaaatgatttagaatttgggtttttat 108  Q
    |||| ||||||||||||| |||| |||||||| ||  |||||| ||||||||||||||||||  | | |||||||||||||||||  ||||| ||| | |    
T  8545578 atatggaaggagaaaagagagaattatgataagtgagtgtcatttgaaagaccgagactctggctatttgagtgaaatgatttagggtttggatttctgt 8545479  T
Q  109 ttatataaaatgggtaataaattgattttctacattcgggacggatttgggta-gggttcgggatgagtacctatattcccgttacccgtcccgtatcca 207  Q
    |||||||||| | ||  ||||||||||||||||||| ||||||  |||| ||| ||||||||| || ||| |||||| |||||||| ||| || || ||     
T  8545478 ttatataaaaggagttgtaaattgattttctacatttgggacgagtttgagtatgggttcggggtgggtatctatatccccgttactcgttccatacccg 8545379  T
Q  208 tcttttgaaatcg 220  Q
    | |||||||||||    
T  8545378 tgttttgaaatcg 8545366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 16 - 145
Target Start/End: Complemental strand, 6388729 - 6388598
Alignment:
Q  16 gaaggagaaaagaaagaactatgataattg--tgtcatctgaaagaccgagactctgattgtatgagtgaaatgatttagaatttgggtttttatttata 113  Q
    ||||||||||  | ||||||||||||| ||  |||||| | |||| | |||||||| ||||| |||||||||||||||||  ||||||||| | ||||||    
T  6388729 gaaggagaaagaagagaactatgataagtgagtgtcattttaaagtctgagactctaattgtgtgagtgaaatgatttagggtttgggtttctgtttata 6388630  T
Q  114 taaaatgggtaataaattgattttctacattc 145  Q
    ||||||||||||||||||||||||||||||||    
T  6388629 taaaatgggtaataaattgattttctacattc 6388598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 77 - 243
Target Start/End: Original strand, 30903973 - 30904139
Alignment:
Q  77 tgagtgaaatgatttagaatttgggtttttatttatataaaatgggtaataaattgattttctacattcgggacggatttgggta-gggttcgggatgag 175  Q
    ||||||||||||||||   ||| ||||| ||||||||||||||| ||||||||||||||||||||||||||||| |||||||||| ||||  ||| || |    
T  30903973 tgagtgaaatgatttaaggttttggtttctatttatataaaatgtgtaataaattgattttctacattcgggactgatttgggtatgggtatggggtggg 30904072  T
Q  176 tacctatattcccgttacccgtcccgtatccatcttttgaaatcgagacaaacccaaacccaatcaaa 243  Q
    ||| |||||  || ||||||||| |||| || | |||||||||||||  |||||||||| || |||||    
T  30904073 tacttatatctccattacccgtctcgtacccgtgttttgaaatcgag-gaaacccaaactcattcaaa 30904139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 17 - 243
Target Start/End: Original strand, 5700221 - 5700450
Alignment:
Q  17 aaggagaaaagaaagaactatgataattg--tgtcatctgaaagaccgagactctgattgtatgagtgaaatgatttagaatttgggtttttatttatat 114  Q
    ||||||| |||| |||| |||||||| ||  |||||||| ||||||  ||||||||| | |  ||||||||||||||||| ||| |||||  ||||||||    
T  5700221 aaggagataagagagaattatgataagtgactgtcatctaaaagactaagactctgactatgggagtgaaatgatttagagtttcggtttcaatttatat 5700320  T
Q  115 aaaatgggtaataaattgattttctacattcgggacggatttgggta-gggttcgggatgagtacctatattcccgttacccgtcccgtatccatctttt 213  Q
    |||| |||||| ||||| ||||| ||||||||||| ||||||||||| ||||||| | || ||| |||||| ||||||||| ||| | || |  | ||||    
T  5700321 aaaaggggtaaaaaattaattttatacattcgggatggatttgggtatgggttcgaggtgggtatctatatccccgttaccagtctcatacctgtgtttt 5700420  T
Q  214 gaaatcgagacaaacccaaacccaatcaaa 243  Q
    ||||||| || ||||  ||||||| |||||    
T  5700421 gaaatcgggaaaaacttaaacccagtcaaa 5700450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 17084348 - 17084124
Alignment:
Q  1 agagtgtggaatattgaaggagaaaagaaagaactatgataattg--tgtcatctgaaagaccgagactctgattgtatgagtgaaatgatttagaattt 98  Q
    |||||||| ||||| ||||||||||||| | ||||||||||| ||  |||||| |||||||| || ||||||||||| |||| | ||| ||||||   ||    
T  17084348 agagtgtgaaatatggaaggagaaaagagataactatgataagtgattgtcatatgaaagactgaaactctgattgtgtgaggggaataatttagggctt 17084249  T
Q  99 gggtttttatttatataaaatgggtaataaattga--ttttctacattcgggacggatttgggta-gggttcgggatgagtacctatattcccgttaccc 195  Q
    |||||| ||||||||||||| ||  ||||||||||  |||| |||||||| || || ||||| || | ||||||| || ||| |||||| ||||||||||    
T  17084248 gggtttatatttatataaaaaggacaataaattgattttttttacattcgtgatgggtttggatatgagttcggggtgggtatctatatccccgttaccc 17084149  T
Q  196 gtcccgtatccatcttttgaaatcg 220  Q
    ||| |||| || | |||| ||||||    
T  17084148 gtctcgtacccgtgttttaaaatcg 17084124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 57 - 157
Target Start/End: Complemental strand, 12468399 - 12468299
Alignment:
Q  57 agaccgagactctgattgtatgagtgaaatgatttagaatttgggtttttatttatataaaatgggtaataaattgattttctacattcgggacggattt 156  Q
    |||||||||||||||  ||||||||||||| |||||| ||||| |||| | ||||||||||| ||||||||| |||||||||||||||||| ||| ||||    
T  12468399 agaccgagactctgacagtatgagtgaaataatttaggatttgcgtttctctttatataaaaagggtaataagttgattttctacattcggaacgaattt 12468300  T
Q  157 g 157  Q
    |    
T  12468299 g 12468299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 125 - 243
Target Start/End: Original strand, 14186295 - 14186414
Alignment:
Q  125 ataaattgattttctacattcgggacggatttgggta-gggttcgggatgagtacctatattcccgttacccgtcccgtatccatcttttgaaatcgaga 223  Q
    ||||||| ||||||||||||| |||||| |||||||| |||||| || |||||||||||||  ||||||||| |||| || || | ||||||||||||||    
T  14186295 ataaattaattttctacattcaggacgggtttgggtatgggttcagggtgagtacctatatatccgttacccatcccatacccgtgttttgaaatcgaga 14186394  T
Q  224 caaacccaaacccaatcaaa 243  Q
     |||| ||||||||||||||    
T  14186395 aaaactcaaacccaatcaaa 14186414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 63 - 220
Target Start/End: Complemental strand, 9476188 - 9476030
Alignment:
Q  63 agactctgattgtatgagtgaaatgatttagaatttgggtttttatttatataaaatgggtaataaattgattttctacattcgggacggatttgggta- 161  Q
    ||||||||| ||| |||||||||| ||||||| |||   ||| |||||||||| || ||||||||| || ||||||||||||||||| || ||||||||     
T  9476188 agactctgactgtgtgagtgaaataatttagagtttcaatttctatttatatataaggggtaataatttaattttctacattcgggatgggtttgggtat 9476089  T
Q  162 gggttcgggatgagtacctatattcccgttacccgtcccgtatccatcttttgaaatcg 220  Q
    ||||||| | || |||  ||||| ||||||||  ||||||||||| | |||||||||||    
T  9476088 gggttcgaggtgggtatttatatccccgttacttgtcccgtatccgttttttgaaatcg 9476030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 69 - 149
Target Start/End: Original strand, 17108295 - 17108375
Alignment:
Q  69 tgattgtatgagtgaaatgatttagaatttgggtttttatttatataaaatgggtaataaattgattttctacattcggga 149  Q
    ||||||| |||||||||| ||||||  |||  |||| |||||||||||||||| ||||||||||||||| |||| ||||||    
T  17108295 tgattgtgtgagtgaaattatttagggtttaagtttctatttatataaaatggataataaattgattttttacaatcggga 17108375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 146 - 243
Target Start/End: Original strand, 17469251 - 17469349
Alignment:
Q  146 gggacggatttgggta-gggttcgggatgagtacctatattcccgttacccgtcccgtatccatcttttgaaatcgagacaaacccaaacccaatcaaa 243  Q
    ||||||| |||||||| ||||| ||| || |||||||||| ||||||||||||||| || || | ||||||||||| |  ||||||||||||| |||||    
T  17469251 gggacgggtttgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgttttgaaatcggggaaaacccaaacccagtcaaa 17469349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 53 - 151
Target Start/End: Complemental strand, 39379763 - 39379666
Alignment:
Q  53 tgaaagaccgagactctgattgtatgagtgaaatgatttagaatttgggtttttatttatataaaatgggtaataaattgattttctacattcgggacg 151  Q
    ||||||||||||||   |||||| | ||||||||||||||  |||||| ||| |||||||| | || || |||||||||||||| ||||||||||||||    
T  39379763 tgaaagaccgagacatcgattgtgtaagtgaaatgatttaagatttggatttctatttatacagaa-ggataataaattgatttactacattcgggacg 39379666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 133 - 237
Target Start/End: Complemental strand, 29108927 - 29108822
Alignment:
Q  133 attttctacattcgggacggatttgggta-gggttcgggatgagtacctatattcccgttacccgtcccgtatccatcttttgaaatcgagacaaaccca 231  Q
    ||||| |||||| ||||||| | |||||| ||||||||| || |||| ||||| ||||||||||||||| || |||| |||| |||||| || |||||||    
T  29108927 attttttacatttgggacgggtatgggtatgggttcggggtgggtacatatatacccgttacccgtcccatacccatgttttaaaatcgggaaaaaccca 29108828  T
Q  232 aaccca 237  Q
     |||||    
T  29108827 taccca 29108822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 133 - 220
Target Start/End: Complemental strand, 40248476 - 40248388
Alignment:
Q  133 attttctacattcgggacggatttgggta-gggttcgggatgagtacctatattcccgttacccgtcccgtatccatcttttgaaatcg 220  Q
    ||||| |||||| ||||||||| |||||| |||||||||||| |||||||||| ||||||| ||||| | || || | |||||||||||    
T  40248476 attttttacatttgggacggatatgggtatgggttcgggatgggtacctatatacccgttatccgtctcatacccgtgttttgaaatcg 40248388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 45 - 144
Target Start/End: Original strand, 5793480 - 5793579
Alignment:
Q  45 gtgtcatctgaaagaccgagactctgattgtatgagtgaaatgatttagaatttgggtttttatttatataaaatgggtaataaattgattttctacatt 144  Q
    ||||| || |||||||  ||||| || |||| |||||||||||||||||  |||| |||| |||||||||||||  | |||| |||||||||| ||||||    
T  5793480 gtgtcgtcagaaagacttagactttggttgtgtgagtgaaatgatttagggtttgagtttctatttatataaaaatgataattaattgattttttacatt 5793579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 137
Target Start/End: Complemental strand, 27777425 - 27777299
Alignment:
Q  14 ttgaaggagaaaagaaagaactatgataattg--tgtcatctgaaagaccgagactctgattgtatgagtgaaatgatttagaatttgggtttttattta 111  Q
    |||||||||||| ||  |||||||||||| ||  |||||||||||| || || |||| || ||| | ||| |||||||||||| ||| | ||| ||||||    
T  27777425 ttgaaggagaaaggagtgaactatgataagtgagtgtcatctgaaatactgaaactcagactgtttaagtaaaatgatttagagtttagatttctattta 27777326  T
Q  112 ta-taaaatgggtaataaattgatttt 137  Q
    ||  |||| ||||||||||||||||||    
T  27777325 tacaaaaaggggtaataaattgatttt 27777299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 134 - 200
Target Start/End: Original strand, 32303045 - 32303112
Alignment:
Q  134 ttttctacattcgggacggatttgggta-gggttcgggatgagtacctatattcccgttacccgtccc 200  Q
    |||| |||||| ||||||| |||||||| ||||||||| || |||||||||| |||||||||||||||    
T  32303045 ttttttacatttgggacgggtttgggtatgggttcggggtgggtacctatatacccgttacccgtccc 32303112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 134 - 232
Target Start/End: Complemental strand, 43113730 - 43113631
Alignment:
Q  134 ttttctacattcgggacggatttgggtagg-gttcgggatgagtacctatattcccgttacccgtcccgtatccatcttttgaaatcgagacaaacccaa 232  Q
    |||||| |||||| |||||||||||||| | ||||||| || |||||||||| || |||||||||||| |  || | ||||||||||| || ||||||||    
T  43113730 ttttctgcattcgagacggatttgggtatgagttcggggtgggtacctatatacctgttacccgtcccatgcccgtgttttgaaatcgggaaaaacccaa 43113631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 141 - 237
Target Start/End: Original strand, 20399583 - 20399680
Alignment:
Q  141 cattcgggacggatttgggta-gggttcgggatgagtacctatattcccgttacccgtcccgtatccatcttttgaaatc-gagacaaacccaaaccca 237  Q
    |||||||||||| |||||| | ||||||||| || ||| |||||| ||||||||||||||| || || | |||||||||| |||| |||||||||||||    
T  20399583 cattcgggacgggtttgggaatgggttcggggtgggtatctatatacccgttacccgtcccatacccgtgttttgaaatcggaga-aaacccaaaccca 20399680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 101 - 244
Target Start/End: Complemental strand, 9642489 - 9642344
Alignment:
Q  101 gtttttatttatataaaatggg-taataaattgattttctacattcgggacggatttgggta-gggttcgggatgagtacctatattcccgttacccgtc 198  Q
    |||| ||||||||||||| ||| ||| ||| | ||||| |||||| ||||||| | || ||| ||||||||||||  ||  ||||  |||||||||||||    
T  9642489 gtttctatttatataaaaaggggtaaaaaaataattttttacatttgggacgggtatgagtatgggttcgggatggatatatataaccccgttacccgtc 9642390  T
Q  199 ccgtatccatcttttgaaatcgagacaaacccaaacccaatcaaag 244  Q
    || || || | ||||||||||| |  ||||||||||||| ||||||    
T  9642389 ccatacccgtgttttgaaatcggggaaaacccaaacccagtcaaag 9642344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 134 - 198
Target Start/End: Original strand, 24927933 - 24927998
Alignment:
Q  134 ttttctacattcgggacggatttgggta-gggttcgggatgagtacctatattcccgttacccgtc 198  Q
    |||| |||||| ||||||| |||||||| ||||||||| || |||||||||| |||||||||||||    
T  24927933 ttttttacatttgggacgggtttgggtatgggttcggggtgggtacctatatacccgttacccgtc 24927998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 133 - 237
Target Start/End: Original strand, 27932396 - 27932501
Alignment:
Q  133 attttctacattcgggacggatttgggta-gggttcgggatgagtacctatattcccgttacccgtcccgtatccatcttttgaaatcgagacaaaccca 231  Q
    ||||| |||||| ||||||||| || ||| ||||||||| || |||||||||| |||||||| |||||| || || | ||||||||||| |  |||||||    
T  27932396 attttttacatttgggacggatatgagtatgggttcggggtgggtacctatatacccgttactcgtcccatacccgtgttttgaaatcggggaaaaccca 27932495  T
Q  232 aaccca 237  Q
     |||||    
T  27932496 taccca 27932501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 109 - 161
Target Start/End: Original strand, 14155491 - 14155543
Alignment:
Q  109 ttatataaaatgggtaataaattgattttctacattcgggacggatttgggta 161  Q
    |||||||||| |||||||||||||||||||||||||  ||| || ||||||||    
T  14155491 ttatataaaaggggtaataaattgattttctacatttaggatgggtttgggta 14155543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 134 - 237
Target Start/End: Original strand, 24568922 - 24569026
Alignment:
Q  134 ttttctacattcgggacggatttgggta-gggttcgggatgagtacctatattcccgttacccgtcccgtatccatcttttgaaatcgagacaaacccaa 232  Q
    |||||| ||||||||||||||||| ||| ||||||||| ||  ||||||||| |||| |||| ||||| || |||| || |||||||| || ||| |||     
T  24568922 ttttctccattcgggacggatttgagtatgggttcggggtggatacctatatacccgctacctgtcccatacccatgttgtgaaatcgggaaaaatccat 24569021  T
Q  233 accca 237  Q
    |||||    
T  24569022 accca 24569026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 125 - 219
Target Start/End: Original strand, 45236040 - 45236135
Alignment:
Q  125 ataaattgattttctacattcgggacggatttgggta-gggttcgggatgagtacctatattcccgttacccgtcccgtatccatcttttgaaatc 219  Q
    ||||||| ||||| |||||| ||||||| | ||| || ||||||||| || |||||||||| ||| ||||||||||| || || | ||||||||||    
T  45236040 ataaattaattttttacatttgggacgggtatggatatgggttcggggtgggtacctatatacccattacccgtcccatacccgtgttttgaaatc 45236135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 133 - 237
Target Start/End: Original strand, 1063490 - 1063595
Alignment:
Q  133 attttctacattcgggacggatttgggtagg-gttcgggatgagtacctatattcccgttacccgtcccgtatccatcttttgaaatcgagacaaaccca 231  Q
    ||||| |||| | |||| ||||||||||| | ||||||| || |||| ||||| ||||||| ||||||| || || | ||||||||||| || |||||||    
T  1063490 attttttacacttgggatggatttgggtatgagttcggggtgggtacttatatacccgttaaccgtcccatacccgtgttttgaaatcgggaaaaaccca 1063589  T
Q  232 aaccca 237  Q
     |||||    
T  1063590 taccca 1063595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 133 - 237
Target Start/End: Complemental strand, 39445681 - 39445576
Alignment:
Q  133 attttctacattcgggacggatttgggtagg-gttcgggatgagtacctatattcccgttacccgtcccgtatccatcttttgaaatcgagacaaaccca 231  Q
    ||||| |||||| ||||||| | |||||| | ||||||| || |||||||||  ||||||||| ||||| || || | ||||||||||| || |||||||    
T  39445681 attttttacatttgggacgggtatgggtatgagttcggggtgggtacctataaacccgttacctgtcccatacccgtgttttgaaatcgggaaaaaccca 39445582  T
Q  232 aaccca 237  Q
     |||||    
T  39445581 taccca 39445576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 141 - 200
Target Start/End: Original strand, 1012610 - 1012670
Alignment:
Q  141 cattcgggacggatttgggta-gggttcgggatgagtacctatattcccgttacccgtccc 200  Q
    |||||||||||  |||||||| ||||||||| || |||||||||| ||| |||||||||||    
T  1012610 cattcgggacgagtttgggtatgggttcggggtgggtacctatatacccattacccgtccc 1012670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 141 - 193
Target Start/End: Original strand, 34139439 - 34139491
Alignment:
Q  141 cattcgggacggatttgggtagggttcgggatgagtacctatattcccgttac 193  Q
    |||||||||||| |||||||| |||||||| || |||||||||| || |||||    
T  34139439 cattcgggacgggtttgggtatggttcggggtgggtacctatatacctgttac 34139491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 74; Significance: 5e-34; HSPs: 40)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 17 - 198
Target Start/End: Original strand, 3773939 - 3774123
Alignment:
Q  17 aaggagaaaagaaagaactatgataattg--tgtcatctgaaagaccgagactctgattgtatgagtgaaatgatttagaatttgggtttttatttatat 114  Q
    |||||||||||| ||||||||||||| ||  |||||| |||||| | || ||||||| ||| ||||| ||||||||| |  ||||||||  || ||||||    
T  3773939 aaggagaaaagatagaactatgataaatgggtgtcatatgaaagtctgaaactctgactgtgtgagtaaaatgattttgcgtttgggttcctaattatat 3774038  T
Q  115 aaaatgggtaataaattgattttctacattcgggacggatttgggta-gggttcgggatgagtacctatattcccgttacccgtc 198  Q
    |||| ||||||||||||||||||||| |||||||||||||||| ||| |||||| || || |||||||||| | |||||||||||    
T  3774039 aaaaggggtaataaattgattttctaaattcgggacggatttgagtatgggttcagggtgggtacctatatcctcgttacccgtc 3774123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 45 - 244
Target Start/End: Complemental strand, 23475457 - 23475256
Alignment:
Q  45 gtgtcatctgaaagaccgagactctgattgtatgagtgaaatgatttagaatttgggtttttatttatataaaatgggtaataaattga-ttttctacat 143  Q
    ||||||||||||| || | |||||||| | | |||||||||||||||||| |||||||||||||||||| |||| ||||| |||||||| |||| |||||    
T  23475457 gtgtcatctgaaacactgggactctgactatgtgagtgaaatgatttagagtttgggtttttatttatacaaaacgggtagtaaattgatttttttacat 23475358  T
Q  144 tcgggacggatttgggta-gggttcgggatgagtacctatattcccgttacccgtcccgtatccatcttttgaaatcgagacaaacccaaacccaatcaa 242  Q
    ||||||||| |||||||| |||||||   || |||| ||||| ||| |||||| ||||  | || | ||||||||||| || ||||||||||||| ||||    
T  23475357 tcgggacgggtttgggtatgggttcgaagtgggtacatatatccccattacccatcccaaacccgtgttttgaaatcgggaaaaacccaaacccagtcaa 23475258  T
Q  243 ag 244  Q
    ||    
T  23475257 ag 23475256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 237
Target Start/End: Original strand, 3156937 - 3157176
Alignment:
Q  1 agagtgtggaatattgaaggagaaaagaaagaactatgataattg--tgtcatctgaaagaccgagactctgattgtatgagtgaaatgatttagaattt 98  Q
    ||||||||  |||| |||||| |||||| |||||||| |||| ||  |||||||| ||||||| ||||||||| |    |||||||| ||||||| ||||    
T  3156937 agagtgtgacatatggaaggaaaaaagagagaactataataagtgagtgtcatctaaaagaccaagactctgactacgcgagtgaaaggatttaggattt 3157036  T
Q  99 gggtttttatttatataaaatgggtaataaattgattttctacattcgggacggatttgggta-gggttcgggatgagtacctatattcccgttacccgt 197  Q
    |||||| ||||||||||  | |||||||||||||||||||||  || ||||||| ||||||||  |||||||  || |||||||||| ||||||| ||||    
T  3157037 gggtttctatttatatagtaggggtaataaattgattttctatgtttgggacgggtttgggtataggttcggtgtgggtacctatatccccgttatccgt 3157136  T
Q  198 cccgtatccatcttttgaaatcgagacaaacccaaaccca 237  Q
    ||| || |||| ||||||||||| |  ||||| |||||||    
T  3157137 cccatacccatattttgaaatcggggaaaacctaaaccca 3157176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 11 - 192
Target Start/End: Complemental strand, 11472941 - 11472759
Alignment:
Q  11 atattgaaggagaaaagaaagaactatgataattg--tgtcatctgaaagaccgagactctgattgtatgagtgaaatgatttagaatttgggtttttat 108  Q
    |||| |||||||| |||| ||||||||||||| ||  |||||||| |||||| |||||||| | |   |||||||||||||||||  ||| ||||| |||    
T  11472941 atatggaaggagataagagagaactatgataagtgagtgtcatctaaaagactgagactctaactacgtgagtgaaatgatttagggttttggtttctat 11472842  T
Q  109 ttatataaaatgggtaataaattgattttctacattcgggacggatttgggta-gggttcgggatgagtacctatattcccgtta 192  Q
    |||||||||| |  ||||||||||||||||| |||| |||||||||||||||| | |||| || |||||||||||||||||||||    
T  11472841 ttatataaaaggtataataaattgattttct-catttgggacggatttgggtatgagttcagg-tgagtacctatattcccgtta 11472759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 11 - 156
Target Start/End: Original strand, 31345390 - 31345537
Alignment:
Q  11 atattgaaggagaaaagaaagaactatgataattg--tgtcatctgaaagaccgagactctgattgtatgagtgaaatgatttagaatttgggtttttat 108  Q
    |||| |||| |||||||| |||| |||||||| ||  |||||||| || ||| |||||| ||||||| ||||||||||||| |||| |||| |||| |||    
T  31345390 atatggaagaagaaaagagagaattatgataagtgagtgtcatctaaatgactgagactttgattgtgtgagtgaaatgatatagagtttgagtttctat 31345489  T
Q  109 ttatataaaatgggtaataaattgattttctacattcgggacggattt 156  Q
    ||||||||||  |||| |||||||||||| |||||||||||| |||||    
T  31345490 ttatataaaaatggtagtaaattgattttttacattcgggacagattt 31345537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 11 - 184
Target Start/End: Original strand, 4101405 - 4101582
Alignment:
Q  11 atattgaaggagaaaagaaagaactatgataatt--gtgtcatctgaaagaccgagactct-gattgtatgagtgaaatgatttagaatttgggttttta 107  Q
    |||| |||||||||||||||||||||||| || |  |||||| || |||||| |||  | | |||||| |||||||||||||| ||  |||| |||||||    
T  4101405 atatcgaaggagaaaagaaagaactatgacaaataagtgtcaactaaaagactgagggttttgattgtgtgagtgaaatgattaagggtttgagttttta 4101504  T
Q  108 tttatataaaatgggtaataaattgattttctacattcgggacggatttgggta-gggttcgggatgagtacctatat 184  Q
    |||| ||||||| |||||||||||||||||| |||||| |||||| || ||||| |||||| ||||| |||| |||||    
T  4101505 tttaaataaaattggtaataaattgattttcaacattcaggacgggttagggtatgggttcaggatgggtacatatat 4101582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 57 - 159
Target Start/End: Complemental strand, 36251111 - 36251009
Alignment:
Q  57 agaccgagactctgattgtatgagtgaaatgatttagaatttgggtttttatttatataaaatgggtaataaattgattttctacattcgggacggattt 156  Q
    |||| |||| ||||| ||||| ||||||||| |||||| |||  |||||||||||||||||||  ||||||||||||||||||||||||||||||| |||    
T  36251111 agactgagagtctgactgtataagtgaaatggtttagagttttagtttttatttatataaaatatgtaataaattgattttctacattcgggacgggttt 36251012  T
Q  157 ggg 159  Q
    |||    
T  36251011 ggg 36251009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 133 - 238
Target Start/End: Complemental strand, 27850431 - 27850325
Alignment:
Q  133 attttctacattcgggacggatttgggta-gggttcgggatgagtacctatattcccgttacccgtcccgtatccatcttttgaaatcgagacaaaccca 231  Q
    |||||||||||||||||||| |||||||| |||||||||||| |||||||||  ||||||||||||||| || || | ||||||||||| |  |||||||    
T  27850431 attttctacattcgggacgggtttgggtatgggttcgggatgggtacctatacacccgttacccgtcccatacccgtgttttgaaatcggggaaaaccca 27850332  T
Q  232 aacccaa 238  Q
     ||||||    
T  27850331 tacccaa 27850325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 45 - 161
Target Start/End: Complemental strand, 19440204 - 19440087
Alignment:
Q  45 gtgtcatctgaaagaccgagactctgattgtatgagtgaaatgatttagaatttgggtttttatttatataaaatgggtaataaattga-ttttctacat 143  Q
    |||||||||| || || |||||||||| | | |||||||||||||||||| ||||||||| ||||||||  ||| ||||  |||||||| |||| |||||    
T  19440204 gtgtcatctggaacactgagactctgactatgtgagtgaaatgatttagagtttgggtttctatttataccaaaggggtggtaaattgatttttttacat 19440105  T
Q  144 tcgggacggatttgggta 161  Q
    ||||||||| ||||||||    
T  19440104 tcgggacgggtttgggta 19440087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 11 - 243
Target Start/End: Complemental strand, 43550644 - 43550411
Alignment:
Q  11 atattgaaggagaaaagaaagaactatgataatt--gtgtcatctgaaagaccgagactctgattgtatgagtgaaatgatttagaatttgggtttttat 108  Q
    |||| |||||||||||||||||| | |||||| |  |||| |  |||||||| ||||||||||   | |||||||||||||||||  ||||||||| |||    
T  43550644 atatggaaggagaaaagaaagaaatgtgataaataagtgttaattgaaagactgagactctgacatt-tgagtgaaatgatttagggtttgggtttctat 43550546  T
Q  109 ttatataaaatgggtaataaattgattttctacattcgggacggatttgggta-gggttcgggatgagtacctatattcccgttacccgtcccgtatcca 207  Q
    ||||||| || ||||||||||| || |||| |||||| |||||| |||| ||| | ||||||| ||||||| ||||| ||  ||||| ||| ||||||      
T  43550545 ttatatagaaggggtaataaatagactttccacattcaggacgggtttgtgtatgagttcggg-tgagtacatatatccctattaccagtctcgtatctg 43550447  T
Q  208 tcttttgaaatcgagacaaacccaaacccaatcaaa 243  Q
    | |||| ||| || |  |||| ||||||||||||||    
T  43550446 tgttttaaaaacggggaaaactcaaacccaatcaaa 43550411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 45 - 161
Target Start/End: Complemental strand, 6557919 - 6557801
Alignment:
Q  45 gtgtcatctgaaagaccgagactctgattgtatgagtgaaatgatttagaatttgggtttttatttatataaaatgggtaataaattga--ttttctaca 142  Q
    |||||||||||||||| |||||| ||||||| |||||||||||||||||| |||| | || ||||| ||| ||| || ||||||| |||  |||| || |    
T  6557919 gtgtcatctgaaagactgagactttgattgtgtgagtgaaatgatttagagtttgagattctatttctatgaaaaggataataaactgattttttttata 6557820  T
Q  143 ttcgggacggatttgggta 161  Q
    |||| ||||||||||||||    
T  6557819 ttcgagacggatttgggta 6557801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 45 - 161
Target Start/End: Complemental strand, 23533798 - 23533680
Alignment:
Q  45 gtgtcatctgaaagaccgagactctgattgtatgagtgaaatgatttagaatttgggtttttatttatataaaatggg-taataaattga-ttttctaca 142  Q
    ||||||||||||| || |||||||||| | | |||||||||||||||||| ||||||||| || ||||| |||| ||| || |||||||| |||| ||||    
T  23533798 gtgtcatctgaaacactgagactctgactatgtgagtgaaatgatttagagtttgggtttctaattatacaaaaggggttagtaaattgatttttttaca 23533699  T
Q  143 ttcgggacggatttgggta 161  Q
    |||||||||  ||||||||    
T  23533698 ttcgggacgagtttgggta 23533680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 37217858 - 37218017
Alignment:
Q  1 agagtgtggaatattgaaggagaaaagaaagaactatgataattg--tgtcatctgaaagaccgagactctgattgtatgagtgaaatgatttagaattt 98  Q
    ||||||||  |||| |||||||| |||| ||||||||||||  ||  |||||| ||||| ||||||||||||||||| | ||| |||||||||||   ||    
T  37217858 agagtgtgagatatggaaggagagaagagagaactatgatatgtgagtgtcatatgaaaaaccgagactctgattgtgttagtaaaatgatttaggcatt 37217957  T
Q  99 gggtttttatttatataaaatgggtaataaattgattttctacattcgggacggatttggg 159  Q
    | |||| |||||||| ||||  | |||| ||||||||||||| |||| |||||| ||||||    
T  37217958 gagtttctatttatacaaaagagataat-aattgattttctatattcaggacgggtttggg 37218017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 133 - 200
Target Start/End: Original strand, 30650619 - 30650687
Alignment:
Q  133 attttctacattcgggacggatttgggta-gggttcgggatgagtacctatattcccgttacccgtccc 200  Q
    ||||| |||||| |||||||||||||||| ||||||||| || |||||||||| |||||||||||||||    
T  30650619 attttttacatttgggacggatttgggtatgggttcggggtgggtacctatatacccgttacccgtccc 30650687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 133 - 243
Target Start/End: Original strand, 3920526 - 3920637
Alignment:
Q  133 attttctacattcgggacggatttgggta-gggttcgggatgagtacctatattcccgttacccgtcccgtatccatcttttgaaatcgagacaaaccca 231  Q
    |||||||||||||||||| | |||||||| ||||||||| || |||||||||| || |||| ||||||| || |  | ||||||||||| |  |||||||    
T  3920526 attttctacattcgggacagttttgggtatgggttcggggtgggtacctatatacctgttatccgtcccataccagtgttttgaaatcggggaaaaccca 3920625  T
Q  232 aacccaatcaaa 243  Q
    |||||| |||||    
T  3920626 aacccagtcaaa 3920637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 135 - 237
Target Start/End: Original strand, 32546182 - 32546285
Alignment:
Q  135 tttctacattcgggacggatttgggta-gggttcgggatgagtacctatattcccgttacccgtcccgtatccatcttttgaaatcgagacaaacccaaa 233  Q
    ||||||||||||||  || |||||||| ||||||||| || |||| ||||| |||||||||||| ||||| || | ||||||||||| || ||| |||||    
T  32546182 tttctacattcgggtagggtttgggtatgggttcggggtgggtacatatatccccgttacccgttccgtacccgtattttgaaatcgggaaaaatccaaa 32546281  T
Q  234 ccca 237  Q
    ||||    
T  32546282 ccca 32546285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 133 - 234
Target Start/End: Original strand, 5377073 - 5377175
Alignment:
Q  133 attttctacattcgggacggatttgggta-gggttcgggatgagtacctatattcccgttacccgtcccgtatccatcttttgaaatcgagacaaaccca 231  Q
    ||||||| |||||||||| |||||||||| ||||||||| || |||||||||| ||| ||||||||||| || |  | ||||||||||| |  |||||||    
T  5377073 attttctgcattcgggacagatttgggtatgggttcggggtgggtacctatataccctttacccgtcccatacctgtgttttgaaatcggggaaaaccca 5377172  T
Q  232 aac 234  Q
    |||    
T  5377173 aac 5377175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 133 - 237
Target Start/End: Complemental strand, 18825977 - 18825872
Alignment:
Q  133 attttctacattcgggacggatttgggta-gggttcgggatgagtacctatattcccgttacccgtcccgtatccatcttttgaaatcgagacaaaccca 231  Q
    |||||||  ||| |||| || |||||||| ||||||||| || |||||||||| ||||||||||||||| || || | ||||||||||| |  |||||||    
T  18825977 attttctgtatttgggatgggtttgggtacgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgttttgaaatcggggaaaaccca 18825878  T
Q  232 aaccca 237  Q
    ||||||    
T  18825877 aaccca 18825872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 139 - 220
Target Start/End: Complemental strand, 39456113 - 39456032
Alignment:
Q  139 tacattcgggacggatttgggtagggttcgggatgagtacctatattcccgttacccgtcccgtatccatcttttgaaatcg 220  Q
    |||||| ||||||| | || ||| |||||||| || |||||||||| ||||||||||||||| || |||| |||||||||||    
T  39456113 tacatttgggacgggtatgagtatggttcggggtgggtacctatatacccgttacccgtcccatacccatgttttgaaatcg 39456032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 79 - 151
Target Start/End: Original strand, 29292636 - 29292708
Alignment:
Q  79 agtgaaatgatttagaatttgggtttttatttatataaaatgggtaataaattgattttctacattcgggacg 151  Q
    |||||||| ||||||  ||||| ||| | ||||||||||| ||||| ||||||||||||||||||||| ||||    
T  29292636 agtgaaataatttagggtttggatttctctttatataaaaggggtagtaaattgattttctacattcgagacg 29292708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 134 - 237
Target Start/End: Original strand, 45380096 - 45380200
Alignment:
Q  134 ttttctacattcgggacggatttgggta-gggttcgggatgagtacctatattcccgttacccgtcccgtatccatcttttgaaatcgagacaaacccaa 232  Q
    |||| |||||| ||||||  ||| |||| ||||||||| || |||||||||| ||||||||||||||| || || | ||||||||||| || |||||||     
T  45380096 ttttttacatttgggacgagtttaggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtattttgaaatcgggaaaaacccat 45380195  T
Q  233 accca 237  Q
    |||||    
T  45380196 accca 45380200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 134 - 200
Target Start/End: Original strand, 35074459 - 35074526
Alignment:
Q  134 ttttctacattcgggacggatttgggta-gggttcgggatgagtacctatattcccgttacccgtccc 200  Q
    |||| |||||| ||||||| |||||||| ||||||||| || |||||||||| |||||||||||||||    
T  35074459 ttttttacatttgggacgggtttgggtatgggttcgggttgggtacctatatacccgttacccgtccc 35074526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 141 - 237
Target Start/End: Complemental strand, 2630670 - 2630574
Alignment:
Q  141 cattcgggacggatttgggta-gggttcgggatgagtacctatattcccgttacccgtcccgtatccatcttttgaaatcgagacaaacccaaaccca 237  Q
    |||||||||||| |||||||| ||||||||| || ||| |||||| ||||| ||||||||| || |||| |||| |||||| |  |||||||||||||    
T  2630670 cattcgggacgggtttgggtatgggttcggggtgggtatctatatacccgtcacccgtcccatacccatgtttt-aaatcggggaaaacccaaaccca 2630574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 133 - 237
Target Start/End: Original strand, 10072454 - 10072559
Alignment:
Q  133 attttctacattcgggacggatttgggta-gggttcgggatgagtacctatattcccgttacccgtcccgtatccatcttttgaaatcgagacaaaccca 231  Q
    ||||| |||||| ||||||| | |||||| ||||||||| || |||||||||| |||||||||||| || || || | ||||||||||| |  |||||||    
T  10072454 attttttacatttgggacggttatgggtatgggttcggggtgggtacctatatacccgttacccgttccatacccgtgttttgaaatcggggaaaaccca 10072553  T
Q  232 aaccca 237  Q
     |||||    
T  10072554 taccca 10072559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 162 - 243
Target Start/End: Complemental strand, 26004549 - 26004468
Alignment:
Q  162 gggttcgggatgagtacctatattcccgttacccgtcccgtatccatcttttgaaatcgagacaaacccaaacccaatcaaa 243  Q
    ||||||||| || ||| |||||| || |||||||||||| || |||  |||||||||||||  ||||||||||||| |||||    
T  26004549 gggttcggggtgggtatctatatacctgttacccgtcccatacccaagttttgaaatcgaggaaaacccaaacccagtcaaa 26004468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 134 - 222
Target Start/End: Original strand, 27063127 - 27063216
Alignment:
Q  134 ttttctacattcgggacggatttgggtagg-gttcgggatgagtacctatattcccgttacccgtcccgtatccatcttttgaaatcgag 222  Q
    |||||||||||||||  || |||||||| | ||||||| ||||||| ||||| ||||||| |||||| ||| || | |||||||||||||    
T  27063127 ttttctacattcgggtagggtttgggtatgagttcggggtgagtacatatatccccgttatccgtcctgtacccgtattttgaaatcgag 27063216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 133 - 228
Target Start/End: Complemental strand, 44734462 - 44734366
Alignment:
Q  133 attttctacattcgggacggatttgggta-gggttcgggatgagtacctatattcccgttacccgtcccgtatccatcttttgaaatcgagacaaac 228  Q
    ||||| |||||| ||||||||| || ||| ||||||||| || |||||||||| ||| ||||| ||||| || || | |||||||||||||| ||||    
T  44734462 attttttacatttgggacggatatgtgtatgggttcggggtgggtacctatatacccattaccggtcccatacccgtgttttgaaatcgagaaaaac 44734366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 162 - 237
Target Start/End: Complemental strand, 3227021 - 3226946
Alignment:
Q  162 gggttcgggatgagtacctatattcccgttacccgtcccgtatccatcttttgaaatcgagacaaacccaaaccca 237  Q
    ||||||||| || ||||||||||||| |||||||||||| || || | ||||||||||| |  ||||||| |||||    
T  3227021 gggttcggggtgggtacctatattcctgttacccgtcccatacccgtgttttgaaatcggggaaaacccataccca 3226946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 134 - 200
Target Start/End: Original strand, 17851843 - 17851910
Alignment:
Q  134 ttttctacattcgggacggatttgggta-gggttcgggatgagtacctatattcccgttacccgtccc 200  Q
    |||| |||||| |||| || |||||||| |||||||||||| ||||||||||  ||||||||||||||    
T  17851843 ttttttacatttgggatgggtttgggtatgggttcgggatgggtacctatatatccgttacccgtccc 17851910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 134 - 200
Target Start/End: Complemental strand, 18125332 - 18125265
Alignment:
Q  134 ttttctacattcgggacggatttgggtagg-gttcgggatgagtacctatattcccgttacccgtccc 200  Q
    |||| |||||| ||||||| |||||||| | ||||||| || |||||||||| |||||||||||||||    
T  18125332 ttttttacatttgggacgggtttgggtatgcgttcggggtgggtacctatatacccgttacccgtccc 18125265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 134 - 200
Target Start/End: Original strand, 21702648 - 21702715
Alignment:
Q  134 ttttctacattcgggacggatttgggta-gggttcgggatgagtacctatattcccgttacccgtccc 200  Q
    |||| |||||| ||||||| || ||||| ||||||||| || |||||||||| |||||||||||||||    
T  21702648 ttttttacatttgggacgggttggggtatgggttcggggtgggtacctatatacccgttacccgtccc 21702715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 62 - 149
Target Start/End: Original strand, 24903334 - 24903421
Alignment:
Q  62 gagactctgattgtatgagtgaaatgatttagaatttgggtttttatttatataaaatgggtaataaattgattttctacattcggga 149  Q
    ||||||||||||| | |||||||||| |||||  |||  |||| ||||||||||||| |||||| ||| |  |||||||||| |||||    
T  24903334 gagactctgattgcacgagtgaaatggtttagcgttttagtttatatttatataaaaggggtaacaaaatagttttctacatccggga 24903421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 141 - 237
Target Start/End: Original strand, 12980373 - 12980470
Alignment:
Q  141 cattcgggacggatttgggta-gggttcgggatgagtacctatattcccgttacccgtcccgtatccatcttttgaaatcgagacaaacccaaaccca 237  Q
    |||| ||||||| |||||||| ||||||||| || |||| ||||| ||| ||||||||||| || || | ||||||||||| |  ||||| |||||||    
T  12980373 catttgggacgggtttgggtatgggttcggggtgggtacttatatacccattacccgtcccatacccgtgttttgaaatcggggaaaaccaaaaccca 12980470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 133 - 237
Target Start/End: Original strand, 17885453 - 17885558
Alignment:
Q  133 attttctacattcgggacggatttgggta-gggttcgggatgagtacctatattcccgttacccgtcccgtatccatcttttgaaatcgagacaaaccca 231  Q
    ||||| |||||| ||||||| | |||||| ||||||||| |  | |||||||| ||||||||||||||| || |||| |||| |||||| |  |||||||    
T  17885453 attttttacatttgggacgggtatgggtatgggttcggggttggaacctatatacccgttacccgtcccatacccatgttttaaaatcggggaaaaccca 17885552  T
Q  232 aaccca 237  Q
     |||||    
T  17885553 taccca 17885558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 135 - 203
Target Start/End: Original strand, 27063324 - 27063393
Alignment:
Q  135 tttctacattcgggacggatttgggtagg-gttcgggatgagtacctatattcccgttacccgtcccgta 203  Q
    ||||||||||||||  || || ||||| | ||||||| || |||| ||||||||||||||||||||||||    
T  27063324 tttctacattcgggtagggttggggtatgagttcggggtgggtacatatattcccgttacccgtcccgta 27063393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 135 - 219
Target Start/End: Original strand, 28309482 - 28309567
Alignment:
Q  135 tttctacattcgggacggatttgggtagg-gttcgggatgagtacctatattcccgttacccgtcccgtatccatcttttgaaatc 219  Q
    ||||||||||||||  || |||||||| | ||||||| |   ||| |||||||||||||||||||||||| || | ||||||||||    
T  28309482 tttctacattcgggtagggtttgggtatgagttcggggtagatacatatattcccgttacccgtcccgtacccgtattttgaaatc 28309567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 133 - 237
Target Start/End: Original strand, 38152875 - 38152980
Alignment:
Q  133 attttctacattcgggacggatttgggta-gggttcgggatgagtacctatattcccgttacccgtcccgtatccatcttttgaaatcgagacaaaccca 231  Q
    ||||| |||||| ||||||| ||| |||| ||||||||| || ||||||||||  |||||| |||| || || |||| ||||||||||| |  |||||||    
T  38152875 attttttacatttgggacgggtttaggtatgggttcggggtgggtacctatatagccgttatccgttccatacccatgttttgaaatcggggaaaaccca 38152974  T
Q  232 aaccca 237  Q
     |||||    
T  38152975 taccca 38152980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 73 - 146
Target Start/End: Complemental strand, 40335805 - 40335732
Alignment:
Q  73 tgtatgagtgaaatgatttagaatttgggtttttatttatataaaatgggtaataaattgattttctacattcg 146  Q
    |||||||||||||||||| |   |||   ||| ||| ||||||||| ||||||||| |||||||||||||||||    
T  40335805 tgtatgagtgaaatgattcatgctttaattttctatgtatataaaaagggtaataagttgattttctacattcg 40335732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 133 - 200
Target Start/End: Original strand, 37182263 - 37182330
Alignment:
Q  133 attttctacattcgggacggatttgggta-gggttcgggatgagtacctatattcccgttacccgtccc 200  Q
    ||||| |||||| ||||||| | |||||| |||||||| |||||||||||||| |||| ||||||||||    
T  37182263 attttttacatttgggacgggtatgggtatgggttcgg-atgagtacctatatacccgctacccgtccc 37182330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 133 - 200
Target Start/End: Complemental strand, 45885870 - 45885802
Alignment:
Q  133 attttctacattcgggacggatttgggta-gggttcgggatgagtacctatattcccgttacccgtccc 200  Q
    ||||| |||||| ||||||||||| |||| ||||||||| || |||||||||| |  ||||||||||||    
T  45885870 attttttacatttgggacggattttggtatgggttcggggtgggtacctatatacttgttacccgtccc 45885802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 72; Significance: 8e-33; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 17153018 - 17153240
Alignment:
Q  1 agagtgtggaatattgaaggagaaaagaaagaactatgataattg--tgtcatctgaaagaccgagactctgattgtatgagtgaaatgatttagaattt 98  Q
    ||||||||  |||| |||| |||||| | ||||||||||||| ||  | |||| |||||||| |||  ||||| ||| |||||||||| ||||||  |||    
T  17153018 agagtgtgagatatggaagaagaaaatagagaactatgataagtgaatctcatttgaaagactgagtatctgactgtgtgagtgaaattatttaggtttt 17153117  T
Q  99 gggtttttatttatataaaatgggtaataaattgattttctacattcgggacggatttgggta-gggttcgggatgagtacctatattcccgttacccgt 197  Q
    || ||| ||||||| || || ||||||||||||||||||||||||||||||||| |||||||| ||||| ||||||||||| |||||    |||| ||||    
T  17153118 ggatttctatttatctagaaggggtaataaattgattttctacattcgggacgggtttgggtatgggtttgggatgagtacatatatcatagttatccgt 17153217  T
Q  198 cccgtatccatcttttgaaatcg 220  Q
    |||||| |||| |||| ||||||    
T  17153218 cccgtacccatgttttaaaatcg 17153240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 18 - 220
Target Start/End: Original strand, 8020485 - 8020686
Alignment:
Q  18 aggagaaaagaaagaactatgataattgtgtcatctgaaagaccgagactctgattgtatgagtgaaatgatttagaatttgggtttttatttatataaa 117  Q
    ||||||||| ||||||||||||| |  ||||||| |||||||| |||||||||| ||| |||||| ||| ||||||  ||| ||||||  ||||||||||    
T  8020485 aggagaaaaaaaagaactatgatga--gtgtcatttgaaagactgagactctgactgtttgagtggaataatttagggtttaggttttcctttatataaa 8020582  T
Q  118 atgggtaataaattgattttctacattcgggacggatttgggta-gggttcgggatgagtacctatattcccgttacccgtcccgtatccatcttttgaa 216  Q
    | ||||| |||||||||||||||||||| | |||| |||| ||| | ||||| ||||||||||||||| || ||||||| | | ||| || | |||||||    
T  8020583 aggggtagtaaattgattttctacattcagaacgggtttgcgtatgagttcgagatgagtacctatatccctgttacccattcagtacccgtgttttgaa 8020682  T
Q  217 atcg 220  Q
    ||||    
T  8020683 atcg 8020686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 69 - 244
Target Start/End: Original strand, 12457436 - 12457612
Alignment:
Q  69 tgattgtatgagtgaaatgatttagaatttgggtttttatttatataaaatgggtaataaattgattttctacattcgggacggatttgggta-gggttc 167  Q
    ||||||| |||||||||||||||||| ||| ||||| ||||||||| ||| ||||||||||||||||||||||||||||||||| |||||||| | ||||    
T  12457436 tgattgtgtgagtgaaatgatttagactttaggtttctatttatattaaaggggtaataaattgattttctacattcgggacgggtttgggtatgagttc 12457535  T
Q  168 gggatgagtacctatattcccgttacccgtcccgtatccatcttttgaaatcgagacaaacccaaacccaatcaaag 244  Q
    ||  |||||   |||||    |||||| ||||| || || | |||||||||||||  || |||||||||||||||||    
T  12457536 ggagtgagtgtttatatctatgttacctgtcccatacccgtattttgaaatcgaggaaaccccaaacccaatcaaag 12457612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 45 - 235
Target Start/End: Complemental strand, 27900593 - 27900404
Alignment:
Q  45 gtgtcatctgaaagaccgagactctgattgtatgagtgaaatgatttagaatttgggtttttatttatataaaatgggtaataaattgattttctacatt 144  Q
    |||||||||||||||| ||   ||||| ||| ||| |||||||||||||  |||  |||| |||||||||||||  || |||||||||||||| ||||||    
T  27900593 gtgtcatctgaaagactgat--tctgaatgtgtgactgaaatgatttagggtttcagtttctatttatataaaagaggaaataaattgattttatacatt 27900496  T
Q  145 cgggacggatttgggta-gggttcgggatgagtacctatattcccgttacccgtcccgtatccatcttttgaaatcgagacaaacccaaacc 235  Q
    |||| |||||||||||| ||||||| |||| |||||||||| | | ||||||||||| || |||| ||||||||||| || |||| ||||||    
T  27900495 cggggcggatttgggtatgggttcgagatgggtacctatatccacattacccgtcccatacccatgttttgaaatcgggaaaaactcaaacc 27900404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 11 - 220
Target Start/End: Original strand, 29664830 - 29665042
Alignment:
Q  11 atattgaaggagaaaagaaagaactatgataattg--tgtcatctgaaagaccgagactctgattgtatgagtgaaatgatttagaatttgggtttttat 108  Q
    |||||||| ||||||||| |||| |||||||| ||  |||||||||||| || ||||||||||   | | | |||||||||||||| |||| |||| |||    
T  29664830 atattgaaagagaaaagagagaattatgataagtgagtgtcatctgaaatactgagactctgacaatgtaaatgaaatgatttagagtttgagtttctat 29664929  T
Q  109 ttatataaaatgggtaataaattgattttctacattcgggacggatttgggta-gggttcgggatgagtacctatattcccgttacccgtcccgtatcca 207  Q
    ||| |||||| ||||| |||||||||||| |||||||||||||| |||||||| | |||||   || |||||||||| |||||||||| ||  ||| ||     
T  29664930 ttaaataaaaggggtagtaaattgattttgtacattcgggacgggtttgggtatgagttcgaagtgggtacctatatccccgttacccatcatgtacccg 29665029  T
Q  208 tcttttgaaatcg 220  Q
    | |||||||||||    
T  29665030 tgttttgaaatcg 29665042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 16 - 244
Target Start/End: Original strand, 6810028 - 6810253
Alignment:
Q  16 gaaggagaaaagaaagaactatgataatt--gtgtcatctgaaagaccgagactctgattgtatgagtgaaatgatttagaatttgggtttttatttata 113  Q
    ||||||||||||| ||||||||||||| |  | |||| |||||| |||||||      |||| |||||||||| |||||   ||||||||| |||| |||    
T  6810028 gaaggagaaaagagagaactatgataaataagggtcaactgaaataccgaga------ttgtgtgagtgaaatcatttaaggtttgggtttctattgata 6810121  T
Q  114 taaaatgggtaataaattgattttctacattcgggacggatttgggta-gggttcgggatgagtacctatattcccgttacccgtcccgtatccatcttt 212  Q
    ||||| ||| |||||||||||||||  ||||||||| || |||||||| ||||||||| ||||||| ||||| | |||||||||| ||||| || | ||     
T  6810122 taaaaggggcaataaattgattttcaccattcgggatgggtttgggtatgggttcggggtgagtacttatatcctcgttacccgttccgtacccgtgttc 6810221  T
Q  213 tgaaatcgagacaaacccaaacccaatcaaag 244  Q
    | |||||| |  |||||||||| || ||||||    
T  6810222 taaaatcggggaaaacccaaactcattcaaag 6810253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 105 - 235
Target Start/End: Complemental strand, 32575072 - 32574941
Alignment:
Q  105 ttatttatataaaatgggtaataaattgattttctacattcgggacggatttggg-tagggttcgggatgagtacctatattcccgttacccgtcccgta 203  Q
    |||||||||||||| ||||||||||||||| ||||||||||||| ||| |||||| | |||||||||||| |||| ||||| |  ||||||| |||||||    
T  32575072 ttatttatataaaaggggtaataaattgatattctacattcggggcgggtttgggtttgggttcgggatgggtacatatatccatgttacccatcccgta 32574973  T
Q  204 tccatcttttgaaatcgagacaaacccaaacc 235  Q
    ||  | ||||||||||| |  |||||||||||    
T  32574972 tctgtgttttgaaatcggggaaaacccaaacc 32574941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 17 - 234
Target Start/End: Original strand, 38972787 - 38973007
Alignment:
Q  17 aaggagaaaagaaagaactatgataattg--tgtcatctgaaagaccgagactctgattgtatgagtgaaatgatttagaatttgggtttttatttatat 114  Q
    ||||||| |||| ||||||||||||| ||  |||||| |||||||   ||||||| |  || ||| | |||||||||||  |||  ||||  ||||||||    
T  38972787 aaggagataagagagaactatgataagtgagtgtcatatgaaagatttagactctaacagtgtgaatcaaatgatttagggtttcagtttcgatttatat 38972886  T
Q  115 aaaatgggtaataaattgattttctacattcgggacggatttgggta-gggttcgggatgagtacctatattcccgttacccgtcccgtatccatctttt 213  Q
    |||| || ||||||||||||||| | |||| | || || |||| ||| ||||||||| || ||||||||||||||||||||  |||| || |||| ||||    
T  38972887 aaaagggttaataaattgattttatgcatttgagatgggtttgagtatgggttcggggtgggtacctatattcccgttacctatcccatacccatgtttt 38972986  T
Q  214 gaaatcgagacaaacccaaac 234  Q
    ||||||| || ||||||||||    
T  38972987 gaaatcgggaaaaacccaaac 38973007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 35583966 - 35584112
Alignment:
Q  1 agagtgtggaatattgaaggagaaaagaaagaactatgataattgtgt--catctgaaagaccgagactctgattgtatgagtgaaatgatttagaattt 98  Q
    ||||||||| ||||  |||||||||| | |||||  |||||| || ||  |||||||||||| |||||||||| ||| ||||  |||||||||||  |||    
T  35583966 agagtgtgggatatgaaaggagaaaacagagaacagtgataaatgagtgacatctgaaagactgagactctgactgtgtgagcaaaatgatttagggttt 35584065  T
Q  99 gggtttttatttatataaaatgggtaataaattgattttctacattcg 146  Q
    | |||| ||||||||||||| |||||||||||||||||| ||||||||    
T  35584066 gagtttctatttatataaaa-gggtaataaattgattttgtacattcg 35584112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 16 - 151
Target Start/End: Complemental strand, 18452110 - 18451973
Alignment:
Q  16 gaaggagaaaagaaagaactatgataattg--tgtcatctgaaagaccgagactctgattgtatgagtgaaatgatttagaatttgggtttttatttata 113  Q
    ||||||||||||| ||||| ||||||| ||  | |||||||||||||||||||| | | ||| ||||||||||||| ||  ||| |  ||| |||| |||    
T  18452110 gaaggagaaaagagagaaccatgataagtgactatcatctgaaagaccgagactttaactgtgtgagtgaaatgatctaagattcgtatttctattaata 18452011  T
Q  114 taaaatgggtaataaattgattttctacattcgggacg 151  Q
    ||||| || |||||||||||||||||||| ||||||||    
T  18452010 taaaagggataataaattgattttctacaatcgggacg 18451973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 198
Target Start/End: Complemental strand, 40187896 - 40187697
Alignment:
Q  1 agagtgtggaatattgaaggagaaaagaaagaactatgataattg--tgtcatctgaaagaccgagactctgattgtatgagtgaaatgatttagaattt 98  Q
    ||||||||  |||| ||| |||| |||| ||||||||||||| ||  ||||||||||||||  || ||||||| | | ||||| ||||||||||| ||||    
T  40187896 agagtgtgagatatggaatgagataagagagaactatgataagtgagtgtcatctgaaagattgaaactctgactatgtgagtaaaatgatttaggattt 40187797  T
Q  99 gggtttttatttatataaaatgggtaataaattgattttctacattcgggacggatttgggta-gggttcgggatgagtacctatattcccgttacccgt 197  Q
       ||  |||||||||||||  ||||||||||| |||||||| ||||||||||  |||||||| | ||| ||| ||| |||||||||  |||||||||||    
T  40187796 tcattactatttatataaaagaggtaataaattaattttctatattcgggacgagtttgggtatgagtttggg-tgaatacctatatctccgttacccgt 40187698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 24207539 - 24207685
Alignment:
Q  1 agagtgtggaatattgaaggagaaaagaaagaactatgataatt--gtgtcatctgaaagaccgagactctgattgtatgagtgaaatgatttagaattt 98  Q
    ||||||||  ||| |||||||||||||| |||||||| |||| |  |||||||||||||||| ||||||||    || |||||||| | ||||||  |||    
T  24207539 agagtgtgagataatgaaggagaaaagagagaactattataagttagtgtcatctgaaagactgagactcta---gtgtgagtgaagttatttagggttt 24207635  T
Q  99 gggtttttatttatataaaatgggtaataaattgattttctacattcggg 148  Q
      |||||||||||||||||| |  ||||||||| ||||||||||||||||    
T  24207636 tagtttttatttatataaaaggattaataaattaattttctacattcggg 24207685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 125 - 243
Target Start/End: Complemental strand, 38006583 - 38006464
Alignment:
Q  125 ataaattgattttctacattcgggacggatttgggta-gggttcgggatgagtacctatattcccgttacccgtcccgtatccatcttttgaaatcgaga 223  Q
    ||||||| |||||| |||||||||||||||||||||| ||||||||| || ||||||||||  | ||||| |||||| || || | ||||||||| | |     
T  38006583 ataaattaattttcaacattcgggacggatttgggtatgggttcggggtgggtacctatatatctgttacgcgtcccatacccgtattttgaaattgggg 38006484  T
Q  224 caaacccaaacccaatcaaa 243  Q
     ||||||||||||| |||||    
T  38006483 aaaacccaaacccagtcaaa 38006464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 79 - 145
Target Start/End: Complemental strand, 457532 - 457466
Alignment:
Q  79 agtgaaatgatttagaatttgggtttttatttatataaaatgggtaataaattgattttctacattc 145  Q
    ||||||||||||||| |||| ||||| ||||||||||||| | |||||||||||||||| |||||||    
T  457532 agtgaaatgatttaggattttggtttctatttatataaaaggtgtaataaattgattttatacattc 457466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 133 - 200
Target Start/End: Original strand, 2985130 - 2985198
Alignment:
Q  133 attttctacattcgggacggatttgggtagggtt-cgggatgagtacctatattcccgttacccgtccc 200  Q
    |||||||| ||||| ||| |||||||||| |||| |||||||||||||||||| |||||||||||||||    
T  2985130 attttctatattcgagacagatttgggtatggtttcgggatgagtacctatatacccgttacccgtccc 2985198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 45 - 220
Target Start/End: Complemental strand, 16311486 - 16311311
Alignment:
Q  45 gtgtcatctgaaagaccgagactctgattgtatgagtgaaatgatttagaatttgggtttttatttatataaaatgggtaataaattgattttctacatt 144  Q
    |||||| ||||||||| ||||||  || | |  |||| |||||||||||  ||||| ||| ||||||||||||| || |||||||||||||||| |||||    
T  16311486 gtgtcaactgaaagactgagactgagactctgcgagtaaaatgatttagggtttgg-tttctatttatataaaagggataataaattgattttcaacatt 16311388  T
Q  145 cgggacggatttgggta-gggttcgggatgagtacctatattcccgttacccgtcccgtatccatcttttgaaatcg 220  Q
    || ||| | ||||  || ||||||||| || |||||||||| || |||| ||||| ||||  | | |||||||||||    
T  16311387 cgagacaggtttgaatatgggttcggggtgggtacctatatccctgttatccgtctcgtactcgtgttttgaaatcg 16311311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 125 - 218
Target Start/End: Complemental strand, 12834688 - 12834594
Alignment:
Q  125 ataaattgattttctacattcgggacggatttgggta-gggttcgggatgagtacctatattcccgttacccgtcccgtatccatcttttgaaat 218  Q
    ||||||| ||||| |||||| ||||||| | |||||| ||||||||| |  |||||||||| || |||||||||||| ||||||| |||||||||    
T  12834688 ataaattaattttttacatttgggacgggtatgggtatgggttcggggtaggtacctatatacctgttacccgtcccatatccatgttttgaaat 12834594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 133 - 197
Target Start/End: Complemental strand, 6092624 - 6092559
Alignment:
Q  133 attttctacattcgggacggatttgggta-gggttcgggatgagtacctatattcccgttacccgt 197  Q
    ||||| |||||| |||||||||||||||| ||||||||| || |||||||||| ||||||||||||    
T  6092624 attttttacatttgggacggatttgggtatgggttcggggtgggtacctatatacccgttacccgt 6092559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 19 - 160
Target Start/End: Complemental strand, 16366671 - 16366526
Alignment:
Q  19 ggagaaaagaaagaactatgataattg--tgtcatctgaaagaccgagactctgattgtatgagtgaaatgattta-gaatttgggtttttatttatata 115  Q
    |||||| ||| |||||| |||||| ||  |||||||||| || | |||| ||||||||| |||  ||||||||||| |  |||| |||| | ||||||||    
T  16366671 ggagaatagagagaactctgataagtgagtgtcatctgataggctgagattctgattgtgtgacggaaatgatttatggttttgagtttctttttatata 16366572  T
Q  116 aaatgg-gtaataaattgattttctacattcgggacggatttgggt 160  Q
    ||| || |||||||| | |||||||||||||||||||  |||||||    
T  16366571 aaagggagtaataaaataattttctacattcgggacgagtttgggt 16366526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 133 - 237
Target Start/End: Original strand, 4920809 - 4920914
Alignment:
Q  133 attttctacattcgggacggatttgggta-gggttcgggatgagtacctatattcccgttacccgtcccgtatccatcttttgaaatcgagacaaaccca 231  Q
    ||||| |||||| ||||||| |||||||| ||||||||| ||  ||||||||| ||||||||||||||| || || | |||||| |||| |  |||||||    
T  4920809 attttttacatttgggacgggtttgggtatgggttcggggtggatacctatatacccgttacccgtcccatacccgtgttttgagatcggggaaaaccca 4920908  T
Q  232 aaccca 237  Q
     |||||    
T  4920909 taccca 4920914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 76 - 161
Target Start/End: Complemental strand, 36579440 - 36579355
Alignment:
Q  76 atgagtgaaatgatttagaatttgggtttttatttatataaaatgggtaataaattgattttctacattcgggacggatttgggta 161  Q
    |||| ||||||| ||||| ||||| |||||||||||||||||| | ||||| || | |||||| |||||  |||||||||| ||||    
T  36579440 atgaatgaaatggtttaggatttgagtttttatttatataaaaagagtaatcaagtaattttcaacattgcggacggatttaggta 36579355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 133 - 220
Target Start/End: Complemental strand, 12866657 - 12866569
Alignment:
Q  133 attttctacattcgggacggatttgggta-gggttcgggatgagtacctatattcccgttacccgtcccgtatccatcttttgaaatcg 220  Q
    ||||| |||||| ||||||| | |||||| ||||||| | || |||||||||| || |||||||||||| || |||| |||||||||||    
T  12866657 attttttacatttgggacgggtatgggtatgggttcgcggtgggtacctatatacctgttacccgtcccatacccatgttttgaaatcg 12866569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 133 - 220
Target Start/End: Original strand, 15890190 - 15890277
Alignment:
Q  133 attttctacattcgggacggatttgggta-gggttcgggatgagtacctatattcccgttacccgtcccgtatccatcttttgaaatcg 220  Q
    ||||| |||||| ||||||| | |||||| ||||||||| || |||||||||| ||||||||||||||| || || | |||||||||||    
T  15890190 attttttacatttgggacgggtatgggtatgggttcggg-tgggtacctatatacccgttacccgtcccatacccgtgttttgaaatcg 15890277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 133 - 200
Target Start/End: Complemental strand, 35194095 - 35194027
Alignment:
Q  133 attttctacattcgggacggatttgggtagg-gttcgggatgagtacctatattcccgttacccgtccc 200  Q
    |||||||||||||||||||| |||| ||| | ||| ||| || |||||||||| |||||||||||||||    
T  35194095 attttctacattcgggacgggtttgagtatgagtttggggtgggtacctatatacccgttacccgtccc 35194027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 133 - 200
Target Start/End: Complemental strand, 42987585 - 42987517
Alignment:
Q  133 attttctacattcgggacggatttgggta-gggttcgggatgagtacctatattcccgttacccgtccc 200  Q
    ||||| |||||| ||||||| |||||||| |||||||||||| ||||||||||  ||||||| ||||||    
T  42987585 attttttacatttgggacgggtttgggtatgggttcgggatgggtacctatatatccgttacacgtccc 42987517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 133 - 239
Target Start/End: Original strand, 15564619 - 15564726
Alignment:
Q  133 attttctacattcgggacggatttgggtagg-gttcgggatgagtacctatattcccgttacccgtcccgtatccatcttttgaaatcgagacaaaccca 231  Q
    |||||||||||||||||||  |||| ||| | ||||||||||| |||  |||| |||||||||| |||| ||  ||| | ||||||||| || |||||||    
T  15564619 attttctacattcgggacgagtttgagtatgagttcgggatgaatacagatatacccgttacccatcccatacgcatttcttgaaatcgggaaaaaccca 15564718  T
Q  232 aacccaat 239  Q
    ||| ||||    
T  15564719 aactcaat 15564726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 154 - 220
Target Start/End: Complemental strand, 28569106 - 28569039
Alignment:
Q  154 tttgggta-gggttcgggatgagtacctatattcccgttacccgtcccgtatccatcttttgaaatcg 220  Q
    |||||||| ||||||||| || |||||||||| |||||||||||||||||| ||   |||||||||||    
T  28569106 tttgggtatgggttcggggtgggtacctatatccccgttacccgtcccgtacccgcattttgaaatcg 28569039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 75 - 141
Target Start/End: Complemental strand, 39887265 - 39887199
Alignment:
Q  75 tatgagtgaaatgatttagaatttgggtttttatttatataaaatgggtaataaattgattttctac 141  Q
    ||||| |||||||||||||| || | |||| |||||||||||||  |  ||||||||||||||||||    
T  39887265 tatgattgaaatgatttagatttcgagtttctatttatataaaagagagaataaattgattttctac 39887199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 133 - 237
Target Start/End: Original strand, 4583102 - 4583207
Alignment:
Q  133 attttctacattcgggacggatttgggta-gggttcgggatgagtacctatattcccgttacccgtcccgtatccatcttttgaaatcgagacaaaccca 231  Q
    ||||| |||||| ||||||| | |||||| ||||| ||| || | |||||||| ||||||||||||||| || || | ||||||||||| |  |||||||    
T  4583102 attttttacatttgggacgggtatgggtatgggtttggggtgggaacctatatacccgttacccgtcccatacccgtgttttgaaatcggggaaaaccca 4583201  T
Q  232 aaccca 237  Q
     |||||    
T  4583202 taccca 4583207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 53 - 118
Target Start/End: Original strand, 12770661 - 12770726
Alignment:
Q  53 tgaaagaccgagactctgattgtatgagtgaaatgatttagaatttgggtttttatttatataaaa 118  Q
    ||||||||||||||| || ||||| ||||||||||||||||  ||||  ||| ||||||| |||||    
T  12770661 tgaaagaccgagactttggttgtacgagtgaaatgatttagggtttgaatttctatttatgtaaaa 12770726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 133 - 237
Target Start/End: Original strand, 28045639 - 28045743
Alignment:
Q  133 attttctacattcgggacggatttgggta-gggttcgggatgagtacctatattcccgttacccgtcccgtatccatcttttgaaatcgagacaaaccca 231  Q
    ||||| |||||| ||||||| | |||||| ||||||||| || |||||||||| ||||||||||||||| ||| | | ||||||| | | || |||||||    
T  28045639 attttttacatttgggacgggtatgggtatgggttcggg-tgggtacctatatacccgttacccgtcccatattcgtgttttgaattagggaaaaaccca 28045737  T
Q  232 aaccca 237  Q
     |||||    
T  28045738 taccca 28045743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 133 - 200
Target Start/End: Complemental strand, 5908794 - 5908726
Alignment:
Q  133 attttctacattcgggacggatttgggta-gggttcgggatgagtacctatattcccgttacccgtccc 200  Q
    ||||| |||||| ||||||| |||||||| ||||| ||| || |||| ||||| |||||||||||||||    
T  5908794 attttttacatttgggacgggtttgggtatgggtttggggtgtgtacatatatacccgttacccgtccc 5908726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 68; Significance: 2e-30; HSPs: 32)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 17 - 184
Target Start/End: Original strand, 36421632 - 36421802
Alignment:
Q  17 aaggagaaaagaaagaactatgataattg--tgtcatctgaaagaccgagactctgattgtatgagtgaaatgatttagaatttgggtttttatttatat 114  Q
    |||||||||||| ||||||||||||| ||  || |||||||||||  |||||||||| ||| ||| |||||||||||||| || | ||||||||||||||    
T  36421632 aaggagaaaagagagaactatgataagtgattgccatctgaaagattgagactctgactgtgtgaatgaaatgatttagagttcgagtttttatttatat 36421731  T
Q  115 aaaatgggtaataaattgattttctacattcgggacggatttgggta-gggttcgggatgagtacctatat 184  Q
    || | || |||||||||||||||||| ||||| ||||  ||||||||   ||||||| |||||||||||||    
T  36421732 aagagggataataaattgattttctatattcgagacgagtttgggtataagttcggggtgagtacctatat 36421802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 80 - 203
Target Start/End: Complemental strand, 48125841 - 48125717
Alignment:
Q  80 gtgaaatgatttagaatttgggtttttatttatataaaatgggtaataaattgattttctacattcgggacggatttgggta-gggttcgggatgagtac 178  Q
    ||||||| ||||||| |||| |||| |||||||||||||  |||| ||||||||||||||||||||| ||||  |||||||| ||||||||| ||  |||    
T  48125841 gtgaaataatttagagtttgagtttctatttatataaaagcggtagtaaattgattttctacattcgcgacgagtttgggtatgggttcggggtggatac 48125742  T
Q  179 ctatattcccgttacccgtcccgta 203  Q
    |||||| | ||||||||||||||||    
T  48125741 ctatatcctcgttacccgtcccgta 48125717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 42729183 - 42729037
Alignment:
Q  1 agagtgtggaatattgaaggagaaaagaaagaactatgataattg--tgtcatctgaaagaccgagactctgattgtatgagtgaaatgatttagaattt 98  Q
    ||||||||  |||| |||||||| |||| ||||||||||||| ||  ||| ||||||||||| |||||||||| ||| |||||||||||||||||  | |    
T  42729183 agagtgtgatatatggaaggagacaagagagaactatgataagtgggtgttatctgaaagactgagactctgactgtgtgagtgaaatgatttagtgtat 42729084  T
Q  99 gggtttttatttatataaaatgggtaataaattgattttctacattc 145  Q
      |||| ||||||||||||| || | ||||||| |||||||||||||    
T  42729083 aagtttctatttatataaaagggatgataaatttattttctacattc 42729037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 13692494 - 13692640
Alignment:
Q  1 agagtgtggaatattgaaggagaaaagaaagaactatgataattg--tgtcatctgaaagaccgagactctgattgtatgagtgaaatgatttagaattt 98  Q
    ||||||||  |||| ||||||||||||| |||||||| |||| ||  |||| |||||||||   ||||||| ||||| || ||||||||||||||  |||    
T  13692494 agagtgtgagatatggaaggagaaaagagagaactataataagtgagtgtcgtctgaaagagtaagactctaattgtgtgggtgaaatgatttagggttt 13692593  T
Q  99 gggtttttatttatataaaatgggtaat-aaattgattttctacatt 144  Q
     ||||| ||||||||||||| || |||| ||||||||||||||||||    
T  13692594 tggtttctatttatataaaagggataataaaattgattttctacatt 13692640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 45 - 203
Target Start/End: Complemental strand, 41477145 - 41476986
Alignment:
Q  45 gtgtcatctgaaagaccgagactctgattgtatgagtgaaatgatttagaatttgggtttttatttatataaaatgggtaataaattgattttctacatt 144  Q
    |||||||||||||||| |||||| ||| ||| ||| |||||| ||||||  |||   ||| | ||||||||||| |||||| ||||||||||||| | ||    
T  41477145 gtgtcatctgaaagacggagactttgactgtgtgaatgaaataatttagggtttccatttctctttatataaaaagggtaacaaattgattttctgcttt 41477046  T
Q  145 cgggacggatttgggta-gggttcgggatgagtacctatattcccgttacccgtcccgta 203  Q
    |||||||| |||||||| || |||||| || |||| ||||| | ||||| ||||||||||    
T  41477045 cgggacgggtttgggtatggattcggggtgggtacatatatccacgttatccgtcccgta 41476986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 16903371 - 16903578
Alignment:
Q  1 agagtgtggaatattgaaggagaaaagaaagaactatgataattg--tgtcatctgaaagaccgagactctgattgtatgagtgaaatgatttagaattt 98  Q
    |||||||| ||||| ||||||||||||| ||||||||||||| ||  |||||      |||| || ||||||||||| |||||||||| ||||||  |||    
T  16903371 agagtgtgaaatatggaaggagaaaagagagaactatgataagtgattgtca------agactgaaactctgattgtgtgagtgaaataatttagggttt 16903464  T
Q  99 gggtttttatttatataaaatgggtaataaattga--------ttttctacattcgggacggatttgggta-gggttcgggatgagtacctatattcccg 189  Q
    | |||| ||||||||||||| ||| ||||||||||        |||| |||||||||||||| |||||||| | ||||||| || |||||||||| |||     
T  16903465 gagtttatatttatataaaaagggcaataaattgattttttttttttttacattcgggacgggtttgggtatgagttcggggtgggtacctatatcccca 16903564  T
Q  190 ttacccgtcccgta 203  Q
    |||||  |||||||    
T  16903565 ttacctatcccgta 16903578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 11 - 161
Target Start/End: Original strand, 8880308 - 8880460
Alignment:
Q  11 atattgaaggagaaaagaaagaactatgataatt--gtgtcatctgaaagaccgagactctgattgtatgagtgaaatgatttagaatttgggtttttat 108  Q
    |||| ||||||||||||| |||| |||||||| |  |||||| ||||||||| | |||||| | | | |||||||||||||||| | |||| |||| |||    
T  8880308 atatggaaggagaaaagagagaattatgataaataagtgtcaactgaaagactgcgactctaactttgtgagtgaaatgatttaaagtttgagtttctat 8880407  T
Q  109 ttatataaaatgggtaataaattgattttctacattcgggacggatttgggta 161  Q
    ||||| |||| |||||||||||| |||||   |||| ||||||| ||||||||    
T  8880408 ttataaaaaaggggtaataaatttatttttagcatttgggacgggtttgggta 8880460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 17 - 236
Target Start/End: Original strand, 39219124 - 39219346
Alignment:
Q  17 aaggagaaaagaaagaactatgataattg--tgtcatctgaaagaccgagactctgattgtatgagtgaaatgatttagaatttgggtttttatttatat 114  Q
    ||||||||| || | ||||||||||| ||  |||||| ||||| |  |||||| ||| ||| |||| ||||||||||||  |||| |||| |||||||||    
T  39219124 aaggagaaaggagataactatgataagtgagtgtcatatgaaaaaatgagactgtgactgtgtgagcgaaatgatttagggtttgagtttctatttatat 39219223  T
Q  115 aaaatgggtaataaattgattttctacattcgggacggatttgggta-gggttcgggatgagtacctatattcccgttacccgtcccgtatccatctttt 213  Q
    ||||  ||||||||||| ||||||||||||  | |||  |||||||| ||||||||| || |||| | ||| ||||||||  || ||||| || | ||||    
T  39219224 aaaagaggtaataaattaattttctacatttagaacgagtttgggtatgggttcggggtgggtacatgtatccccgttacttgttccgtacccgtgtttt 39219323  T
Q  214 gaaatcgagacaaacccaaaccc 236  Q
     |||||| |  ||||||||||||    
T  39219324 aaaatcggggaaaacccaaaccc 39219346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 45 - 146
Target Start/End: Complemental strand, 43513222 - 43513121
Alignment:
Q  45 gtgtcatctgaaagaccgagactctgattgtatgagtgaaatgatttagaatttgggtttttatttatataaaatgggtaataaattgattttctacatt 144  Q
    ||||| ||||| | ||||| |||||||||||| ||||||||| ||||||  |||| |||| ||||||||||||| | || ||||||||||||| ||||||    
T  43513222 gtgtcctctgacacaccgaaactctgattgtacgagtgaaattatttagggtttgagtttctatttatataaaaagagttataaattgattttttacatt 43513123  T
Q  145 cg 146  Q
    ||    
T  43513122 cg 43513121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 134 - 237
Target Start/End: Original strand, 12494995 - 12495099
Alignment:
Q  134 ttttctacattcgggacggatttgggta-gggttcgggatgagtacctatattcccgttacccgtcccgtatccatcttttgaaatcgagacaaacccaa 232  Q
    ||||||||||| ||||||| |||||||| ||||||| | || |||||||||| |||||||| |||||| ||||| | ||||||||||| || ||||| ||    
T  12494995 ttttctacatttgggacgggtttgggtatgggttcgaggtgggtacctatatacccgttacacgtcccatatccgtgttttgaaatcgggaaaaaccaaa 12495094  T
Q  233 accca 237  Q
    |||||    
T  12495095 accca 12495099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 83 - 161
Target Start/End: Complemental strand, 33293675 - 33293597
Alignment:
Q  83 aaatgatttagaatttgggtttttatttatataaaatgggtaataaattgattttctacattcgggacggatttgggta 161  Q
    |||||||||||  |||| |||| |||| |||||||||||||| |||||||||||||||||||||| |||  ||||||||    
T  33293675 aaatgatttagggtttgagtttctattgatataaaatgggtactaaattgattttctacattcggaacgagtttgggta 33293597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 56 - 183
Target Start/End: Original strand, 23719510 - 23719637
Alignment:
Q  56 aagaccgagactctgattgtatgagtgaaatgatttagaatttgggtttttatttatataaaatgggtaataaattgattttctacattcgggacggatt 155  Q
    ||||| ||||||| || ||| | |||||||||||||| | |||| |||| ||||||||||||| ||||| |||||||| ||| |||||||||||||  ||    
T  23719510 aagactgagactcagactgtgttagtgaaatgatttatagtttgagtttctatttatataaaaagggtagtaaattga-tttgtacattcgggacgagtt 23719608  T
Q  156 tgggta-gggttcgggatgagtacctata 183  Q
    || ||| | ||||||||||  ||||||||    
T  23719609 tgagtatgagttcgggatggatacctata 23719637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 133 - 237
Target Start/End: Original strand, 29936400 - 29936505
Alignment:
Q  133 attttctacattcgggacggatttgggta-gggttcgggatgagtacctatattcccgttacccgtcccgtatccatcttttgaaatcgagacaaaccca 231  Q
    ||||| |||||| ||||||| |||||||| ||||||||| || |||||||||| ||||||||||||||| || || | |||||| |||| |  |||||||    
T  29936400 attttttacatttgggacgggtttgggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtattttgagatcggggaaaaccca 29936499  T
Q  232 aaccca 237  Q
     |||||    
T  29936500 taccca 29936505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 133 - 220
Target Start/End: Complemental strand, 29871390 - 29871302
Alignment:
Q  133 attttctacattcgggacggatttgggta-gggttcgggatgagtacctatattcccgttacccgtcccgtatccatcttttgaaatcg 220  Q
    |||||||||||||||||||| |||||||| | |||| || || |||||||||| || |||||| ||||| || |||| |||||||||||    
T  29871390 attttctacattcgggacgggtttgggtatgagttcagggtgggtacctatataccagttacctgtcccatacccatgttttgaaatcg 29871302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 134 - 200
Target Start/End: Original strand, 28297919 - 28297986
Alignment:
Q  134 ttttctacattcgggacggatttgggta-gggttcgggatgagtacctatattcccgttacccgtccc 200  Q
    |||| |||||| ||||||| |||||||| ||||||||| || |||||||||| |||||||||||||||    
T  28297919 ttttttacatttgggacgggtttgggtatgggttcggggtgggtacctatatacccgttacccgtccc 28297986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 79 - 150
Target Start/End: Complemental strand, 48576277 - 48576206
Alignment:
Q  79 agtgaaatgatttagaatttgggtttttatttatataaaatgggtaataaattgattttctacattcgggac 150  Q
    |||||||||||||||  |||| | ||||||||||| |||| || | ||||||||||||||| ||||||||||    
T  48576277 agtgaaatgatttagggtttgagattttatttatacaaaaaggattataaattgattttcttcattcgggac 48576206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 133 - 237
Target Start/End: Complemental strand, 19572617 - 19572512
Alignment:
Q  133 attttctacattcgggacggatttgggta-gggttcgggatgagtacctatattcccgttacccgtcccgtatccatcttttgaaatcgagacaaaccca 231  Q
    ||||| |||||| ||||||| | || ||| ||||||||| || |||||||||| ||||||||| ||||| || || | ||||||||||| || |||||||    
T  19572617 attttttacatttgggacgggtatgagtatgggttcggggtgggtacctatatacccgttacctgtcccatacccgtgttttgaaatcgggaaaaaccca 19572518  T
Q  232 aaccca 237  Q
     |||||    
T  19572517 taccca 19572512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 78 - 151
Target Start/End: Complemental strand, 47645019 - 47644946
Alignment:
Q  78 gagtgaaatgatttagaatttgggtttttatttatataaaatgggtaataaattgattttctacattcgggacg 151  Q
    |||||||||||||||| || || |||| ||||||||||||| || |||||||||  | || |||||||||||||    
T  47645019 gagtgaaatgatttaggatctgagtttctatttatataaaagggataataaattattattttacattcgggacg 47644946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 81 - 141
Target Start/End: Original strand, 2581505 - 2581564
Alignment:
Q  81 tgaaatgatttagaatttgggtttttatttatataaaatgggtaataaattgattttctac 141  Q
    |||||||||||||| |||| |||| ||||||||||||| || || ||||||||||||||||    
T  2581505 tgaaatgatttagagtttgagtttctatttatataaaa-ggatattaaattgattttctac 2581564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 125 - 200
Target Start/End: Complemental strand, 23490884 - 23490808
Alignment:
Q  125 ataaattgattttctacattcgggacggatttgggta-gggttcgggatgagtacctatattcccgttacccgtccc 200  Q
    |||||||  |||| |||||| ||||||| ||| |||| ||||||||| || |||||||||| |||||||||||||||    
T  23490884 ataaattagttttttacatttgggacgggttttggtatgggttcggggtgggtacctatatacccgttacccgtccc 23490808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 69 - 203
Target Start/End: Complemental strand, 5283762 - 5283627
Alignment:
Q  69 tgattgtatgagtgaaatgatttagaatttgggtttttatttatataaaatgggtaataaattgattttctacattcgggacggatttgggta-gggttc 167  Q
    ||||||| |||| ||||||||||| | |||| |||  |||||||| |||| || | |||||||||||||||||| ||  ||||| ||| |||| | ||||    
T  5283762 tgattgtgtgagagaaatgatttaaagtttgagttcctatttatacaaaagggatgataaattgattttctacaatccagacgggtttaggtatgagttc 5283663  T
Q  168 gggatgagtacctatattcccgttacccgtcccgta 203  Q
    | | || |||| | ||| ||| ||||||||||||||    
T  5283662 gaggtgggtacttctatccccattacccgtcccgta 5283627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 109 - 144
Target Start/End: Original strand, 13798198 - 13798233
Alignment:
Q  109 ttatataaaatgggtaataaattgattttctacatt 144  Q
    |||||||||| |||||||||||||||||||||||||    
T  13798198 ttatataaaaggggtaataaattgattttctacatt 13798233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 135 - 233
Target Start/End: Complemental strand, 16237407 - 16237308
Alignment:
Q  135 tttctacattcgggacggatttgggta-gggttcgggatgagtacctatattcccgttacccgtcccgtatccatcttttgaaatcgagacaaacccaaa 233  Q
    ||||||||||||||  || |||||||| ||||||||| | ||||| ||||| | ||||||||||||| || || | ||||||||||| |  |||||||||    
T  16237407 tttctacattcgggtagggtttgggtatgggttcggggttagtacatatatcctcgttacccgtcccttacccgtattttgaaatcggggaaaacccaaa 16237308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 139 - 237
Target Start/End: Original strand, 34611063 - 34611162
Alignment:
Q  139 tacattcgggacggatttgggta-gggttcgggatgagtacctatattcccgttacccgtcccgtatccatcttttgaaatcgagacaaacccaaaccca 237  Q
    |||||| ||||||| |||||||| ||||||||| ||||||||||||| | ||||||  ||||| || || | |||||| |||| || ||||||| |||||    
T  34611063 tacatttgggacgggtttgggtatgggttcggggtgagtacctatatacacgttacatgtcccatacccgtgttttgagatcgggaaaaacccataccca 34611162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 139 - 237
Target Start/End: Complemental strand, 36187319 - 36187220
Alignment:
Q  139 tacattcgggacggatttgggta-gggttcgggatgagtacctatattcccgttacccgtcccgtatccatcttttgaaatcgagacaaacccaaaccca 237  Q
    |||||| ||||||| |||||||| |||||| || || |||||||||| ||||||||||||||| || || | |||||| |||| |  ||||||| |||||    
T  36187319 tacatttgggacgggtttgggtatgggttcagggtgggtacctatatacccgttacccgtcccatacccgtgttttgagatcggggaaaacccataccca 36187220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 220
Target Start/End: Complemental strand, 42707911 - 42707854
Alignment:
Q  162 gggttcgggatgagtacctatattcccgttacccgtcccgtatccatcttttgaaatcg 220  Q
    ||||||||| ||||||| ||||||||||||||||||||| || || | |||||||||||    
T  42707911 gggttcggg-tgagtacttatattcccgttacccgtcccatacccgtgttttgaaatcg 42707854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 62 - 151
Target Start/End: Complemental strand, 5293586 - 5293497
Alignment:
Q  62 gagactctgattgtatgagtgaaatgatttagaatttgggtttttatttatataaaatgggtaataaattgattttctacattcgggacg 151  Q
    |||||||||  ||| ||| ||||||  ||| || |||| |||| |||||||||||||  | ||||||||||| |||| ||||||||||||    
T  5293586 gagactctggctgtgtgattgaaatagttttgagtttgagtttctatttatataaaagtgataataaattgactttcaacattcgggacg 5293497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 135 - 203
Target Start/End: Original strand, 23058452 - 23058521
Alignment:
Q  135 tttctacattcgggacggatttgggta-gggttcgggatgagtacctatattcccgttacccgtcccgta 203  Q
    |||||| |||||||  || |||||||| ||||||||| || |||||||||| ||||||||||||| ||||    
T  23058452 tttctatattcgggtagggtttgggtatgggttcggggtgggtacctatatccccgttacccgtctcgta 23058521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 2 - 151
Target Start/End: Original strand, 25181054 - 25181206
Alignment:
Q  2 gagtgtggaatattgaaggagaaaagaaagaactatgataatt--gtgtcatctgaaagaccgagactctgattgtatgagtgaaatgattt-agaattt 98  Q
    |||||||  |||| |||||||||||||||||| | | |||| |  || |||||||||||||  ||||||| | | | |||||||||| |||| ||| |||    
T  25181054 gagtgtgagatatggaaggagaaaagaaagaattgtaataagtgagtatcatctgaaagacaaagactctaactatgtgagtgaaattatttaagagttt 25181153  T
Q  99 gggtttttatttatataaaatgggtaataaattgattttctacattcgggacg 151  Q
     ||||| |||||||||| || || || |||||||| ||| |||| | ||||||    
T  25181154 aggtttctatttatatagaagggatagtaaattgactttttacaattgggacg 25181206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 134 - 190
Target Start/End: Complemental strand, 49741111 - 49741054
Alignment:
Q  134 ttttctacattcgggacggatttgggta-gggttcgggatgagtacctatattcccgt 190  Q
    |||||| |||||||||||| |||||||| ||||||||| || |||||||||| |||||    
T  49741111 ttttctgcattcgggacgggtttgggtatgggttcggggtgggtacctatatacccgt 49741054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 133 - 237
Target Start/End: Original strand, 51421842 - 51421947
Alignment:
Q  133 attttctacattcgggacggatttgggta-gggttcgggatgagtacctatattcccgttacccgtcccgtatccatcttttgaaatcgagacaaaccca 231  Q
    ||||| |||||| ||||||| |||||||| ||||||||| || |||| ||||| |  |||||||||||| || || | |||||| |||| || |||||||    
T  51421842 attttttacatttgggacgggtttgggtatgggttcggggtgggtacatatatacatgttacccgtcccatacccgtgttttgagatcgggaaaaaccca 51421941  T
Q  232 aaccca 237  Q
     |||||    
T  51421942 taccca 51421947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 154 - 237
Target Start/End: Complemental strand, 34673366 - 34673282
Alignment:
Q  154 tttgggta-gggttcgggatgagtacctatattcccgttacccgtcccgtatccatcttttgaaatcgagacaaacccaaaccca 237  Q
    |||||||| ||||||||| || |||||||||| ||||||||| ||| | || || | ||||||||| | || |||||||||||||    
T  34673366 tttgggtatgggttcggggtgggtacctatatacccgttaccagtctcatacccgtgttttgaaattgggaaaaacccaaaccca 34673282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 67; Significance: 8e-30; HSPs: 27)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 46 - 219
Target Start/End: Original strand, 30696821 - 30696995
Alignment:
Q  46 tgtcatctgaaagaccgagactctgattgtatgagtgaaatgatttagaatttgggtttttatttatataaaatgggtaataaattgattttctacattc 145  Q
    |||||| ||||||||||||||||| | ||| ||||||| |||||||||  ||||  ||| |||||||||||||||||||||||||||||||| ||||||     
T  30696821 tgtcatatgaaagaccgagactctaactgtgtgagtgacatgatttagggtttgaatttctatttatataaaatgggtaataaattgattttttacattt 30696920  T
Q  146 gggacggatttgggta-gggttcgggatgagtacctatattcccgttacccgtcccgtatccatcttttgaaatc 219  Q
    ||||  | |||||||| | ||||||| || |||| |||||  | |||||||||| ||||||||| |||| |||||    
T  30696921 gggataggtttgggtatgagttcggggtgggtacatatatctctgttacccgtctcgtatccatgttttaaaatc 30696995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 62 - 237
Target Start/End: Original strand, 25210290 - 25210466
Alignment:
Q  62 gagactctgattgtatgagtgaaatgatttagaatttgggtttttatttatataaaatgggtaataaattgattttctacattcgggacggatttgggta 161  Q
    ||||||| || ||| |||||||||||||||||  |||| |||| |||||||||||||||||||| ||||||||||||||||||||||| || ||| ||||    
T  25210290 gagactccgactgtgtgagtgaaatgatttagggtttgagtttctatttatataaaatgggtaacaaattgattttctacattcgggaggggttttggta 25210389  T
Q  162 -gggttcgggatgagtacctatattcccgttacccgtcccgtatccatcttttgaaatcgagacaaacccaaaccca 237  Q
     ||||| ||| || |||| ||||| | ||||||||||||| || || | |||| || ||| || ||||| |||||||    
T  25210390 tgggtttggggtgggtacatatatcctcgttacccgtcccatacccgtgttttaaagtcgggaaaaacctaaaccca 25210466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 34544550 - 34544400
Alignment:
Q  1 agagtgtggaatattgaaggagaaaagaaagaactatgataattg--tgtcatctgaaagaccgagactctgattgtatgagtgaaatgatttagaattt 98  Q
    ||||||||  |||| ||||||| ||||| |||||||||| || ||  |||||||| ||||| ||||| |||  |||| ||| |||||| ||||||  |||    
T  34544550 agagtgtgagatatggaaggagtaaagagagaactatgagaagtgattgtcatctaaaagaacgagagtctcgttgtgtgaatgaaattatttagggttt 34544451  T
Q  99 gggtttttatttatataaaatgggtaataaattgattttctacattcggga 149  Q
    | |||||||||||||||||||||||||||||| ||||||||||||||||||    
T  34544450 gagtttttatttatataaaatgggtaataaatagattttctacattcggga 34544400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 69 - 216
Target Start/End: Original strand, 13531869 - 13532017
Alignment:
Q  69 tgattgtatgagtgaaatgatttagaatttgggtttttatttatataaaatgggtaataaattgattttctacattcgggacggatttgggt-agggttc 167  Q
    ||||||| |||||||||||||||||  |||| |||| |||||||||||||||| |||||||||||||||||||||  ||| ||| |||| ||  ||||||    
T  13531869 tgattgtgtgagtgaaatgatttagggtttgagtttctatttatataaaatggataataaattgattttctacatgtggggcgggtttgagtgtgggttc 13531968  T
Q  168 gggatgagtacctatattcccgttacccgtcccgtatccatcttttgaa 216  Q
    ||| ||| ||| ||||| | |||||||  ||| |||||||| |||||||    
T  13531969 ggggtgaatacatatatcctcgttacctatccagtatccatgttttgaa 13532017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 45 - 157
Target Start/End: Complemental strand, 29656928 - 29656816
Alignment:
Q  45 gtgtcatctgaaagaccgagactctgattgtatgagtgaaatgatttagaatttgggtttttatttatataaaatgggtaataaattgattttctacatt 144  Q
    |||||||||||||||| |||||| ||| ||| ||||| |||||||||||  ||  ||||||||||||||||||| || ||||||||||||||| ||||||    
T  29656928 gtgtcatctgaaagactgagactttgactgtgtgagtcaaatgatttagggttatggtttttatttatataaaagggataataaattgattttatacatt 29656829  T
Q  145 cgggacggatttg 157  Q
     | ||| ||||||    
T  29656828 tgagacagatttg 29656816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 11 - 143
Target Start/End: Complemental strand, 34214885 - 34214752
Alignment:
Q  11 atattgaaggagaaaagaaagaactatgataattg--tgtcatctgaaagaccgagactctgattgtatgagtgaaatgatttagaatttgggtttttat 108  Q
    |||| |||||||||||||  |||||||||||| ||  |||||| |||||||| |||||||||| ||| | ||||||||||||||| | ||| |||| |||    
T  34214885 atatcgaaggagaaaagagcgaactatgataagtgagtgtcatgtgaaagactgagactctgactgtgttagtgaaatgatttag-agttgagtttctat 34214787  T
Q  109 ttatataaaatgggtaataaattgattttctacat 143  Q
    |||||||||  ||| |||||||||| |||||||||    
T  34214786 ttatataaacagggcaataaattgactttctacat 34214752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 11 - 236
Target Start/End: Complemental strand, 35248610 - 35248386
Alignment:
Q  11 atattgaaggagaaaagaaagaactatgataattg--tgtcatctgaaagaccgagactctgattgtatgagtgaaatgatttagaatttgggtttttat 108  Q
    |||| |||||||| |||| |||||||| ||||  |  |||||| |||||||| |||||||||  ||| |||||||||||||||||  |||   ||| |||    
T  35248610 atatggaaggagataagagagaactataataagcgagtgtcatttgaaagactgagactctgtctgtgtgagtgaaatgatttagggtttcattttctat 35248511  T
Q  109 ttatataaaatgggtaataaattgattttctacattcgggacggatttgggta-gggttcgggatgagtacctatattcccgttacccgtcccgtatcca 207  Q
    |||||||||| ||||| || |||   ||||||||||| |||||| |||||||| ||||||||| || |||||| ||| ||| ||||||||||| || ||     
T  35248510 ttatataaaaggggta-tatatt---tttctacattcaggacgggtttgggtatgggttcggggtgggtacctttatcccctttacccgtcccatacccg 35248415  T
Q  208 tcttttgaaatcgagacaaacccaaaccc 236  Q
    | ||||| ||||| |  ||||||||||||    
T  35248414 tgttttgtaatcgtggaaaacccaaaccc 35248386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 21 - 147
Target Start/End: Complemental strand, 35409371 - 35409245
Alignment:
Q  21 agaaaagaaagaactatgataattg--tgtcatctgaaagaccgagactctgattgtatgagtgaaatgatttagaatttgggtttttatttatataaaa 118  Q
    ||||||||| |||||||||||| ||  |||||| || ||||| |||||||||| ||| | ||||||||  |||||| |||||||||||||||||||  ||    
T  35409371 agaaaagaatgaactatgataagtgagtgtcatatgtaagactgagactctgactgtgtaagtgaaatagtttagagtttgggtttttatttatat--aa 35409274  T
Q  119 tgggtaataaattgattttctacattcgg 147  Q
     |||||| ||||||||||| |||||||||    
T  35409273 cgggtaaaaaattgattttatacattcgg 35409245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 17 - 157
Target Start/End: Original strand, 13954611 - 13954753
Alignment:
Q  17 aaggagaaaagaaagaactatgataattg--tgtcatctgaaagaccgagactctgattgtatgagtgaaatgatttagaatttgggtttttatttatat 114  Q
    |||||||||||| |||||||| |||| ||  ||||||||||||| | |||||||| |  |  |||||||||||||||||  || | |||| |||||||||    
T  13954611 aaggagaaaagagagaactatcataagtgagtgtcatctgaaagtctgagactctcaccgagtgagtgaaatgatttagggttcgagtttctatttatat 13954710  T
Q  115 aaaatgggtaataaattgattttctacattcgggacggatttg 157  Q
    ||||  |||||||| |||||||||||| |||| ||||| ||||    
T  13954711 aaaagtggtaataagttgattttctacgttcgagacgggtttg 13954753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 17 - 157
Target Start/End: Original strand, 14095818 - 14095960
Alignment:
Q  17 aaggagaaaagaaagaactatgataattg--tgtcatctgaaagaccgagactctgattgtatgagtgaaatgatttagaatttgggtttttatttatat 114  Q
    |||||||||||| |||||||| |||| ||  ||||||||||||| | |||||||| |  |  |||||||||||||||||  || | |||| |||||||||    
T  14095818 aaggagaaaagagagaactatcataagtgagtgtcatctgaaagtctgagactctcaccgagtgagtgaaatgatttagggttcgagtttctatttatat 14095917  T
Q  115 aaaatgggtaataaattgattttctacattcgggacggatttg 157  Q
    ||||  |||||||| |||||||||||| |||| ||||| ||||    
T  14095918 aaaagtggtaataagttgattttctacgttcgagacgggtttg 14095960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 11 - 133
Target Start/End: Complemental strand, 31600997 - 31600873
Alignment:
Q  11 atattgaaggagaaaagaaagaactatgataattgtg--tcatctgaaagaccgagactctgattgtatgagtgaaatgatttagaatttgggtttttat 108  Q
    |||| |||||| | |||| ||||||||||||| || |  |||| ||||||||  ||||||| | |||||||||||||||||||||| |||| |||| |||    
T  31600997 atatggaaggatagaagagagaactatgataagtgagcgtcatatgaaagactaagactctaactgtatgagtgaaatgatttagagtttgagtttctat 31600898  T
Q  109 ttatataaaatgggtaataaattga 133  Q
    |||||||||| | ||| ||||||||    
T  31600897 ttatataaaaggcgtattaaattga 31600873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 35965184 - 35965356
Alignment:
Q  1 agagtgtggaatattgaaggagaaaagaaagaactatgataattg--tgtcatctgaaagaccgagactctgattgtatgagtgaaatgatttagaattt 98  Q
    ||||||||  |||| |||||||| || | ||||||||||||| ||  ||| |||||||| || ||||  || | ||||||||||||||||||||    ||    
T  35965184 agagtgtgagatatggaaggagataaaagagaactatgataagtgaatgttatctgaaaaactgagatcctcactgtatgagtgaaatgatttatggatt 35965283  T
Q  99 gggtttttattta-tataaaatgggtaataaattgattttctacattcgggacggatttgggta-gggttcgg 169  Q
       ||  |||||| ||||||| ||| ||||||||||||||||||||||||||||| |||||||| ||||||||    
T  35965284 caattcctatttagtataaaaggggcaataaattgattttctacattcgggacgggtttgggtatgggttcgg 35965356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 45 - 145
Target Start/End: Original strand, 11958911 - 11959011
Alignment:
Q  45 gtgtcatctgaaagaccgagactctgattgtatgagtgaaatgatttagaatttgggtttttatttatataaaatgggtaataaattgattttctacatt 144  Q
    ||||||||||||||||||||||||| | ||| | ||| ||||||| |||  |||| |||| |  ||||||||||  ||||||||||||||||| ||||||    
T  11958911 gtgtcatctgaaagaccgagactctaactgtgtaagttaaatgatctaggttttgagtttctgcttatataaaagaggtaataaattgattttatacatt 11959010  T
Q  145 c 145  Q
    |    
T  11959011 c 11959011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 135 - 237
Target Start/End: Complemental strand, 38342622 - 38342519
Alignment:
Q  135 tttctacattcgggacggatttgggta-gggttcgggatgagtacctatattcccgttacccgtcccgtatccatcttttgaaatcgagacaaacccaaa 233  Q
    ||||||||||||||  || |||||||| ||||||||| || |||| ||||| ||||||||||||||||||||| | |||| |||||| |  |||| ||||    
T  38342622 tttctacattcgggtagggtttgggtatgggttcggggtgggtacatatatccccgttacccgtcccgtatccgtattttaaaatcggggaaaactcaaa 38342523  T
Q  234 ccca 237  Q
    ||||    
T  38342522 ccca 38342519  T

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Target: chr2; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 48 - 114
Target Start/End: Complemental strand, 40734773 - 40734707
Alignment:
Q  48 tcatctgaaagaccgagactctgattgtatgagtgaaatgatttagaatttgggtttttatttatat 114  Q
    |||| |||||||| |||||||||| ||| |||||||||||||||||  ||| |||||||||||||||    
T  40734773 tcatttgaaagactgagactctgactgtgtgagtgaaatgatttagggttttggtttttatttatat 40734707  T

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Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 77 - 161
Target Start/End: Complemental strand, 17845553 - 17845468
Alignment:
Q  77 tgagtgaaatgatttagaatttgggtttttatttatataaaatgggtaataaattga-ttttctacattcgggacggatttgggta 161  Q
    |||||||||||||||||  || | |||| ||||||||||||| || ||||||||||| |||| |||||||| ||||| ||||||||    
T  17845553 tgagtgaaatgatttaggtttggagtttctatttatataaaaaggataataaattgatttttttacattcgagacgggtttgggta 17845468  T

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Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 134 - 200
Target Start/End: Complemental strand, 36128210 - 36128143
Alignment:
Q  134 ttttctacattcgggacggatttgggta-gggttcgggatgagtacctatattcccgttacccgtccc 200  Q
    |||| |||||| ||||||| |||||||| ||||||||| ||||||||||||| |||||||||| ||||    
T  36128210 ttttttacatttgggacgggtttgggtatgggttcggggtgagtacctatatacccgttacccatccc 36128143  T

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Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 81 - 144
Target Start/End: Original strand, 40359276 - 40359339
Alignment:
Q  81 tgaaatgatttagaatttgggtttttatttatataaaatgggtaataaattgattttctacatt 144  Q
    |||||||||||||| |||| |||| |||||||||||||   |||||||||||||||| ||||||    
T  40359276 tgaaatgatttagactttgagtttctatttatataaaagatgtaataaattgattttttacatt 40359339  T

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Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 85 - 200
Target Start/End: Complemental strand, 4961601 - 4961488
Alignment:
Q  85 atgatttagaatttgggtttttatttatataaaatgggtaataaattgattttctacattcgggacggatttgggta-gggttcgggatgagtacctata 183  Q
    ||||||||||  |||||||| ||||   ||||||  ||||||||||| |||||||| ||||||||||  |||||||| ||||||| | || |||||||||    
T  4961601 atgatttagagcttgggtttctatt---ataaaagaggtaataaattcattttctatattcgggacgagtttgggtatgggttcgaggtgtgtacctata 4961505  T
Q  184 ttcccgttacccgtccc 200  Q
    | || ||||| ||||||    
T  4961504 tccctgttacacgtccc 4961488  T

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Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 134 - 243
Target Start/End: Complemental strand, 6027993 - 6027883
Alignment:
Q  134 ttttctacattcgggacggatttgggta-gggttcgggatgagtacctatattcccgttacccgtcccgtatccatcttttgaaatcgagacaaacccaa 232  Q
    |||||| ||||| |||||| | || ||| ||||||||| || |||||||||| || |||||||||| | || |||| |||| |||||| |  ||||||||    
T  6027993 ttttctgcattcaggacgggtatgagtatgggttcggggtgggtacctatatacctgttacccgtctcatacccatgttttaaaatcggggaaaacccaa 6027894  T
Q  233 acccaatcaaa 243  Q
    |||||||||||    
T  6027893 acccaatcaaa 6027883  T

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Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 133 - 237
Target Start/End: Complemental strand, 8916042 - 8915938
Alignment:
Q  133 attttctacattcgggacggatttgggta-gggttcgggatgagtacctatattcccgttacccgtcccgtatccatcttttgaaatcgagacaaaccca 231  Q
    ||||| |||||| ||||||| |||| ||| ||||||||| || |||||||||| || |||||||||||| || || | |||||| ||||||| |||||||    
T  8916042 attttttacatttgggacgggtttgagtatgggttcggggtgggtacctatatacctgttacccgtcccatacccgtgttttgagatcgaga-aaaccca 8915944  T
Q  232 aaccca 237  Q
     |||||    
T  8915943 taccca 8915938  T

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Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 135 - 233
Target Start/End: Original strand, 3547152 - 3547251
Alignment:
Q  135 tttctacattcgggacggatttgggta-gggttcgggatgagtacctatattcccgttacccgtcccgtatccatcttttgaaatcgagacaaacccaaa 233  Q
    ||||||||||||||  || ||||| || ||||||||| || |||| |||||  ||||||||||||||||| || | |||||||||||  | |||||||||    
T  3547152 tttctacattcgggtagggtttggatatgggttcggggtgggtacatatatctccgttacccgtcccgtacccgtattttgaaatcggtaaaaacccaaa 3547251  T

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Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 134 - 200
Target Start/End: Complemental strand, 24414236 - 24414169
Alignment:
Q  134 ttttctacattcgggacggatttgggta-gggttcgggatgagtacctatattcccgttacccgtccc 200  Q
    |||| |||||| ||||||| |||||||| ||||||||| || |||||||||| || ||||||||||||    
T  24414236 ttttttacatttgggacgggtttgggtatgggttcggggtgggtacctatatacctgttacccgtccc 24414169  T

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Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 146 - 200
Target Start/End: Original strand, 30846943 - 30846998
Alignment:
Q  146 gggacggatttgggta-gggttcgggatgagtacctatattcccgttacccgtccc 200  Q
    ||||||| |||||||| ||||||||| || |||||||||| |||||||||||||||    
T  30846943 gggacgggtttgggtatgggttcggggtgggtacctatatacccgttacccgtccc 30846998  T

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Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 133 - 200
Target Start/End: Complemental strand, 7314753 - 7314685
Alignment:
Q  133 attttctacattcgggacggatttgggta-gggttcgggatgagtacctatattcccgttacccgtccc 200  Q
    ||||| |||||| ||||||| | |||||| ||||||||| || | |||||||| |||||||||||||||    
T  7314753 attttttacatttgggacgggtgtgggtatgggttcggggtgggaacctatatacccgttacccgtccc 7314685  T

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Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 62 - 161
Target Start/End: Original strand, 34320535 - 34320635
Alignment:
Q  62 gagactctgattgtatgagtgaaatgatttagaatttgggtttttatttatataaaatgggt-aataaattgattttctacattcgggacggatttgggt 160  Q
    |||||||||||||| ||  ||||||||||||  ||||| |||| | || || ||||| |||  |||||| |||||||| ||||||||||||  |||||||    
T  34320535 gagactctgattgtgtggctgaaatgatttatgatttgtgtttcttttgatttaaaagggggcaataaaatgattttcaacattcgggacgtgtttgggt 34320634  T
Q  161 a 161  Q
    |    
T  34320635 a 34320635  T

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Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 162 - 222
Target Start/End: Original strand, 45115572 - 45115632
Alignment:
Q  162 gggttcgggatgagtacctatattcccgttacccgtcccgtatccatcttttgaaatcgag 222  Q
    |||||||||||| |||||||||| || |||||||||| | || || | |||||||||||||    
T  45115572 gggttcgggatgggtacctatatacctgttacccgtctcatacccgtgttttgaaatcgag 45115632  T

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Target: scaffold0244 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0244
Description:

Target: scaffold0244; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 3 - 145
Target Start/End: Complemental strand, 4817 - 4673
Alignment:
Q  3 agtgtggaatattgaaggagaaaagaaagaactatgataattg--tgtcatctgaaagaccgagactctgattgtatgagtgaaatgatttagaatttgg 100  Q
    |||||| ||||| |||||| |||||| ||||||||||||| ||  ||| |||| |||||||| |||||||| ||| |||||||||||||||||| ||| |    
T  4817 agtgtgaaatatggaaggaaaaaagagagaactatgataagtgagtgttatctaaaagaccgtgactctgactgtgtgagtgaaatgatttagagttttg 4718  T
Q  101 gtttttatttatataaaatgggtaataaattgattttctacattc 145  Q
     ||| ||||||||||||| |||| |||| ||||||||||||||||    
T  4717 atttctatttatataaaaggggttataatttgattttctacattc 4673  T

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Target: scaffold0264 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0264
Description:

Target: scaffold0264; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 74 - 220
Target Start/End: Complemental strand, 17619 - 17472
Alignment:
Q  74 gtatgagtgaaatgatttagaatttgggtttttatttatataaaatgggtaataaattgattttctacattcgggacggatttgggt-agggttcgggat 172  Q
    |||||||||||||||||||   |||| |||| ||||||||||||||||||||||||| | |||| ||||||||| ||   ||||| | |||||| |||||    
T  17619 gtatgagtgaaatgatttatggtttgcgtttctatttatataaaatgggtaataaatgggttttatacattcggtacatgtttggataagggtttgggat 17520  T
Q  173 gagtacctatattcccgttacccgtcccgtatccatcttttgaaatcg 220  Q
    |  ||||||||| |||||||||| ||| |||||||| |||||||||||    
T  17519 ggatacctatatccccgttacccttcctgtatccatgttttgaaatcg 17472  T

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Target: scaffold1322 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold1322
Description:

Target: scaffold1322; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 77 - 159
Target Start/End: Original strand, 1038 - 1120
Alignment:
Q  77 tgagtgaaatgatttagaatttgggtttttatttatataaaatgggtaataaattgattttctacattcgggacggatttggg 159  Q
    ||||||||||||||||  ||||| |||| |||||||||||||||||||||||||| |||||||||||||  ||||| ||||||    
T  1038 tgagtgaaatgatttaagatttgagtttctatttatataaaatgggtaataaattaattttctacattcatgacgggtttggg 1120  T

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Target: scaffold0157 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 47 - 161
Target Start/End: Original strand, 14755 - 14869
Alignment:
Q  47 gtcatctgaaagaccgagactctgattgtatgagtgaaatgatttagaatttgggtttttatttatataaaatgggtaataaattgattttctacattcg 146  Q
    |||||||||||||| |||||| |||||||  || ||||||||||||   |||  |||| ||||||||||||| ||| ||||||||||| || ||| |||     
T  14755 gtcatctgaaagactgagactttgattgtgcgaatgaaatgatttaatgtttaagtttctatttatataaaaggggaaataaattgatgttttaccttca 14854  T
Q  147 ggacggatttgggta 161  Q
    |||||| ||||||||    
T  14855 ggacgggtttgggta 14869  T

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Target: scaffold0036 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 134 - 237
Target Start/End: Original strand, 33377 - 33481
Alignment:
Q  134 ttttctacattcgggacggatttgggta-gggttcgggatgagtacctatattcccgttacccgtcccgtatccatcttttgaaatcgagacaaacccaa 232  Q
    |||||| |||||||||||  |||||||| ||||||||| || |||| ||||| ||||||||||||||| || || | ||||||||||| |  ||||||||    
T  33377 ttttctgcattcgggacgagtttgggtatgggttcggggtgggtacatatatacccgttacccgtcccatacccgtgttttgaaatcggggaaaacccaa 33476  T
Q  233 accca 237  Q
    |||||    
T  33477 accca 33481  T

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