View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3162_high_65 (Length: 263)
Name: NF3162_high_65
Description: NF3162
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3162_high_65 |
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Alignment Details
Target: chr1 (Bit Score: 169; Significance: 1e-90; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 9 - 239
Target Start/End: Original strand, 26007766 - 26008000
Alignment:
| Q |
9 |
agcataagttgaccaagatggaaaatatcactatgaccatgaattatgtacatgtcaaattaattctaattgacaaaatgcttgtaacaatagcttcgat |
108 |
Q |
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| T |
26007766 |
agcataagttgaccaatatggaaaagatcactatgaccatgaattatttacatgtcaaattaattctaattgacaaaatgcttgtagcaatagcttcgat |
26007865 |
T |
|
| Q |
109 |
agaaattaaaggtcactaagatattcgagttttgatctactaccat---tgtacgttgtagtaggttgtagagtcgttcgatctaaatataaattactta |
205 |
Q |
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| T |
26007866 |
agaaattaaatgtcactaagatattcgagttttgatctactaccgttgatgtgcattgtagtgggttgtagagtcgttcgatctagatataaattactta |
26007965 |
T |
|
| Q |
206 |
tggattc-gataaacggtttcctaatccgctgcac |
239 |
Q |
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||||||| |||||||||||||||| |||||||||| |
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| T |
26007966 |
tggattcagataaacggtttcctagtccgctgcac |
26008000 |
T |
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