View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3162_low_74 (Length: 248)
Name: NF3162_low_74
Description: NF3162
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3162_low_74 |
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Alignment Details
Target: chr8 (Bit Score: 220; Significance: 1e-121; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 1 - 232
Target Start/End: Original strand, 38771074 - 38771305
Alignment:
| Q |
1 |
ctcattgctttttgtttcagcttctgctgtttctatattcacctcagctgcaacatcatttttattttgtttcacaacagttggttcattgattttacta |
100 |
Q |
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| T |
38771074 |
ctcattgctttttgtttcagcttctggtgtttctatcttcacctcagctgcaacatcatttttattttgtttcacaacagctggttcattgattttacta |
38771173 |
T |
|
| Q |
101 |
gtttcttgtgaagttttcttagcttcttcatgtgtttctgtcttcacaatctcttcagctgctgaatcagtgattttattttgcaatgaaggtttttcct |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38771174 |
gtttcttgtgaagttttcttagcttcttcatgtgtttctgtcttcacaatctcttcagctgctgaatcagtgattttattttgcaatgaaggtttttcct |
38771273 |
T |
|
| Q |
201 |
caacaactgcacattcttgttcagtagatggt |
232 |
Q |
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|||||||||||||||||||||||||||||||| |
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| T |
38771274 |
caacaactgcacattcttgttcagtagatggt |
38771305 |
T |
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