View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3162_low_85 (Length: 237)
Name: NF3162_low_85
Description: NF3162
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3162_low_85 |
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Alignment Details
Target: chr8 (Bit Score: 213; Significance: 1e-117; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 6370977 - 6370757
Alignment:
| Q |
1 |
tacattccaagagatgaattacttcacacagatgagagtttaatattcagtcaagagtttaacacctttcaagatgtgttgtcactcttcaatattcaaa |
100 |
Q |
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| T |
6370977 |
tacattccaagagatgaattacttcacacagatgagagtttaatattcagtcaagagtttaacacctttcaagatgtgttgtcactcttcaatattcaaa |
6370878 |
T |
|
| Q |
101 |
ttaaccatggtcctgatatactaagtaaattcaacaaaacatcgaggtccaacgaactttccccaattaatgctaaatcagtggctaaaagttcaacgta |
200 |
Q |
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||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
6370877 |
ttaaccatggtactgatatactaagtaaattcaacaaaacatcgaggtccaacgaactttccccaattaatgctaaatcagtggctaaaagttcaacgta |
6370778 |
T |
|
| Q |
201 |
tccaacaccacaagtaattgc |
221 |
Q |
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||||||||||||||| ||||| |
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| T |
6370777 |
tccaacaccacaagtgattgc |
6370757 |
T |
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