View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3163_high_3 (Length: 471)

Name: NF3163_high_3
Description: NF3163
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3163_high_3
NF3163_high_3
[»] chr5 (46 HSPs)
chr5 (1-459)||(42770323-42770781)
chr5 (1-110)||(36208478-36208588)
chr5 (7-110)||(25904001-25904105)
chr5 (7-85)||(26098528-26098607)
chr5 (1-106)||(31472885-31472990)
chr5 (7-92)||(2818613-2818698)
chr5 (7-91)||(17072800-17072885)
chr5 (17-91)||(2144878-2144954)
chr5 (7-85)||(18596570-18596649)
chr5 (7-85)||(26097656-26097735)
chr5 (7-92)||(36402605-36402689)
chr5 (7-97)||(37706057-37706148)
chr5 (7-68)||(12556200-12556262)
chr5 (7-92)||(25921750-25921835)
chr5 (14-91)||(39398276-39398354)
chr5 (15-91)||(2723884-2723961)
chr5 (7-91)||(20044927-20045012)
chr5 (7-91)||(34530943-34531027)
chr5 (22-110)||(1189905-1189996)
chr5 (14-97)||(17818773-17818857)
chr5 (14-92)||(21947944-21948022)
chr5 (7-85)||(41585983-41586062)
chr5 (7-68)||(20507739-20507801)
chr5 (50-83)||(4897638-4897671)
chr5 (7-91)||(10474600-10474685)
chr5 (7-91)||(20042967-20043052)
chr5 (7-91)||(24126773-24126858)
chr5 (37-110)||(29748240-29748312)
chr5 (37-89)||(3373349-3373401)
chr5 (37-89)||(10586758-10586810)
chr5 (37-89)||(15552154-15552206)
chr5 (37-89)||(18468926-18468978)
chr5 (37-89)||(25803935-25803987)
chr5 (37-89)||(27910364-27910416)
chr5 (37-89)||(27912449-27912501)
chr5 (7-66)||(40221464-40221524)
chr5 (17-91)||(15225069-15225143)
chr5 (220-258)||(695658-695696)
chr5 (7-92)||(4236546-4236631)
chr5 (37-110)||(16092512-16092585)
chr5 (7-91)||(16776075-16776160)
chr5 (225-258)||(20044784-20044817)
chr5 (37-90)||(25837938-25837990)
chr5 (1-110)||(9020120-9020231)
chr5 (37-89)||(18466599-18466651)
chr5 (37-65)||(35430120-35430148)
[»] chr1 (61 HSPs)
chr1 (7-110)||(49495478-49495582)
chr1 (5-137)||(15669667-15669802)
chr1 (14-96)||(16431013-16431096)
chr1 (14-110)||(8347555-8347652)
chr1 (7-123)||(31423153-31423269)
chr1 (14-111)||(9241372-9241468)
chr1 (14-91)||(42922151-42922229)
chr1 (7-110)||(11457754-11457858)
chr1 (7-97)||(6756438-6756529)
chr1 (7-110)||(50079100-50079204)
chr1 (2-92)||(30790668-30790758)
chr1 (48-110)||(8349370-8349432)
chr1 (18-106)||(50076962-50077051)
chr1 (7-91)||(18800848-18800932)
chr1 (25-91)||(43104076-43104143)
chr1 (7-92)||(41646837-41646922)
chr1 (7-63)||(25251554-25251611)
chr1 (1-110)||(26613511-26613622)
chr1 (7-94)||(16428567-16428655)
chr1 (14-89)||(48665090-48665166)
chr1 (7-85)||(28998532-28998611)
chr1 (7-85)||(29004248-29004327)
chr1 (14-88)||(40133856-40133930)
chr1 (7-92)||(13214998-13215083)
chr1 (7-88)||(17318814-17318895)
chr1 (7-92)||(28207345-28207430)
chr1 (7-68)||(38925757-38925819)
chr1 (14-111)||(47451547-47451643)
chr1 (15-91)||(50248859-50248936)
chr1 (22-106)||(12302803-12302890)
chr1 (6-77)||(50307825-50307897)
chr1 (7-97)||(14183865-14183955)
chr1 (7-89)||(17186407-17186490)
chr1 (7-93)||(18307024-18307111)
chr1 (220-258)||(25248989-25249027)
chr1 (220-258)||(25251750-25251788)
chr1 (37-91)||(27916415-27916468)
chr1 (1-106)||(30738899-30739004)
chr1 (17-89)||(17323984-17324057)
chr1 (17-89)||(24325575-24325648)
chr1 (7-63)||(25248793-25248850)
chr1 (14-58)||(26520404-26520449)
chr1 (37-89)||(2510638-2510690)
chr1 (14-85)||(6995986-6996058)
chr1 (37-89)||(9459733-9459785)
chr1 (37-89)||(9463560-9463612)
chr1 (37-89)||(31735835-31735887)
chr1 (37-89)||(46432038-46432090)
chr1 (37-89)||(47906183-47906235)
chr1 (7-85)||(2949510-2949589)
chr1 (38-97)||(14996863-14996921)
chr1 (38-89)||(27339445-27339496)
chr1 (17-111)||(39462417-39462511)
chr1 (7-92)||(15823463-15823548)
chr1 (220-258)||(17186623-17186661)
chr1 (7-89)||(28842413-28842497)
chr1 (14-91)||(31489832-31489910)
chr1 (7-92)||(51749956-51750041)
chr1 (7-92)||(51752282-51752367)
chr1 (37-110)||(155599-155671)
chr1 (7-67)||(14098249-14098310)
[»] chr2 (40 HSPs)
chr2 (7-106)||(37963204-37963304)
chr2 (7-110)||(17848991-17849095)
chr2 (7-110)||(31733042-31733146)
chr2 (7-92)||(12342687-12342772)
chr2 (7-111)||(22874017-22874120)
chr2 (17-91)||(40699203-40699278)
chr2 (7-88)||(28196534-28196615)
chr2 (14-88)||(17848342-17848414)
chr2 (7-76)||(19007548-19007618)
chr2 (7-92)||(40032335-40032420)
chr2 (7-110)||(11578381-11578485)
chr2 (22-89)||(20147040-20147108)
chr2 (48-110)||(45239300-45239362)
chr2 (7-91)||(22163224-22163309)
chr2 (17-92)||(35107193-35107268)
chr2 (7-89)||(42452678-42452761)
chr2 (7-92)||(6264422-6264507)
chr2 (14-91)||(11739844-11739922)
chr2 (1-110)||(13828612-13828720)
chr2 (7-92)||(13910321-13910406)
chr2 (7-92)||(19504622-19504707)
chr2 (7-92)||(27104692-27104777)
chr2 (37-91)||(35028473-35028526)
chr2 (38-91)||(33603818-33603870)
chr2 (7-77)||(38414312-38414378)
chr2 (37-89)||(23452549-23452601)
chr2 (37-89)||(35215904-35215956)
chr2 (7-61)||(3022086-3022141)
chr2 (37-91)||(17897550-17897605)
chr2 (7-65)||(24162489-24162548)
chr2 (37-92)||(28462594-28462648)
chr2 (14-91)||(15539759-15539837)
chr2 (220-258)||(15539970-15540008)
chr2 (37-79)||(20146915-20146957)
chr2 (220-258)||(22163420-22163458)
chr2 (15-92)||(42064408-42064485)
chr2 (7-91)||(45280262-45280348)
chr2 (15-91)||(14837166-14837243)
chr2 (11-91)||(44289349-44289430)
chr2 (22-85)||(42923803-42923867)
[»] chr7 (54 HSPs)
chr7 (1-91)||(20091812-20091903)
chr7 (7-91)||(7188470-7188555)
chr7 (7-91)||(22828910-22828995)
chr7 (14-110)||(24817632-24817729)
chr7 (7-110)||(4296212-4296317)
chr7 (2-90)||(30906322-30906411)
chr7 (1-91)||(6332153-6332243)
chr7 (7-88)||(11355189-11355270)
chr7 (7-88)||(20137386-20137467)
chr7 (15-85)||(443528-443599)
chr7 (7-85)||(42331276-42331355)
chr7 (7-92)||(27306506-27306591)
chr7 (22-106)||(9680726-9680812)
chr7 (18-88)||(42223087-42223157)
chr7 (7-92)||(35556-35641)
chr7 (7-68)||(22392423-22392485)
chr7 (7-91)||(39146264-39146349)
chr7 (37-89)||(7351966-7352018)
chr7 (14-85)||(13099760-13099832)
chr7 (55-110)||(24465449-24465502)
chr7 (7-92)||(26804500-26804581)
chr7 (7-89)||(31156188-31156271)
chr7 (220-259)||(44724356-44724395)
chr7 (7-68)||(44514-44576)
chr7 (38-103)||(6048586-6048652)
chr7 (14-91)||(25276068-25276146)
chr7 (17-89)||(1606399-1606472)
chr7 (7-91)||(21677993-21678078)
chr7 (7-91)||(21679954-21680039)
chr7 (37-89)||(3035646-3035698)
chr7 (37-89)||(7349587-7349639)
chr7 (37-89)||(11757153-11757205)
chr7 (37-89)||(18345466-18345518)
chr7 (14-85)||(21990084-21990156)
chr7 (37-89)||(28485491-28485543)
chr7 (37-89)||(38393911-38393963)
chr7 (37-89)||(38396215-38396267)
chr7 (37-89)||(43253832-43253884)
chr7 (17-91)||(6048725-6048799)
chr7 (1-58)||(6348778-6348837)
chr7 (7-65)||(22251819-22251878)
chr7 (220-251)||(27833128-27833159)
chr7 (7-85)||(37412405-37412484)
chr7 (7-92)||(1049572-1049657)
chr7 (7-68)||(18567563-18567625)
chr7 (7-68)||(31435324-31435386)
chr7 (38-92)||(45366473-45366526)
chr7 (48-89)||(1849894-1849935)
chr7 (48-89)||(21470614-21470655)
chr7 (13-91)||(26210473-26210553)
chr7 (7-91)||(44724506-44724591)
chr7 (46-90)||(6067509-6067552)
chr7 (37-89)||(20299383-20299435)
chr7 (14-65)||(25542484-25542536)
[»] chr8 (40 HSPs)
chr8 (7-91)||(15185987-15186072)
chr8 (7-106)||(27910973-27911073)
chr8 (7-106)||(27957392-27957492)
chr8 (3-91)||(31162186-31162275)
chr8 (14-88)||(13858768-13858842)
chr8 (7-89)||(26775176-26775259)
chr8 (7-110)||(35872655-35872759)
chr8 (7-97)||(1225133-1225224)
chr8 (22-104)||(6375949-6376032)
chr8 (7-88)||(14419468-14419549)
chr8 (7-91)||(25952494-25952579)
chr8 (7-85)||(181516-181595)
chr8 (18-110)||(30480791-30480884)
chr8 (7-89)||(3886195-3886277)
chr8 (7-88)||(5623015-5623096)
chr8 (17-102)||(14419784-14419870)
chr8 (7-92)||(14807724-14807809)
chr8 (7-91)||(27107174-27107259)
chr8 (7-110)||(36865491-36865596)
chr8 (1-85)||(41382652-41382736)
chr8 (37-89)||(3873981-3874033)
chr8 (7-89)||(15072686-15072768)
chr8 (37-92)||(17847501-17847555)
chr8 (7-69)||(21482317-21482380)
chr8 (7-92)||(4423991-4424076)
chr8 (14-91)||(14477249-14477327)
chr8 (7-92)||(15067954-15068039)
chr8 (7-91)||(33541665-33541750)
chr8 (37-89)||(15809190-15809242)
chr8 (37-89)||(24873495-24873547)
chr8 (17-92)||(28251854-28251929)
chr8 (37-89)||(28283533-28283585)
chr8 (37-89)||(32339280-32339332)
chr8 (15-68)||(2468383-2468437)
chr8 (220-258)||(26775005-26775043)
chr8 (7-92)||(27826959-27827044)
chr8 (7-92)||(27829270-27829355)
chr8 (220-258)||(33541861-33541899)
chr8 (14-85)||(41384724-41384796)
chr8 (37-89)||(43530099-43530151)
[»] chr4 (57 HSPs)
chr4 (1-91)||(16186108-16186199)
chr4 (7-116)||(36378240-36378348)
chr4 (7-91)||(15032813-15032898)
chr4 (7-110)||(19095834-19095938)
chr4 (20-97)||(36380339-36380417)
chr4 (1-110)||(18537742-18537852)
chr4 (7-110)||(24446856-24446960)
chr4 (17-92)||(25357607-25357683)
chr4 (199-261)||(16186309-16186371)
chr4 (7-88)||(38928455-38928536)
chr4 (1-68)||(8756521-8756589)
chr4 (7-110)||(12396122-12396226)
chr4 (7-110)||(12401084-12401188)
chr4 (7-85)||(5100974-5101053)
chr4 (2-103)||(18535101-18535203)
chr4 (7-92)||(22803011-22803096)
chr4 (7-88)||(33415764-33415845)
chr4 (7-92)||(48486290-48486375)
chr4 (17-110)||(52043716-52043811)
chr4 (7-68)||(619724-619786)
chr4 (7-92)||(5198391-5198476)
chr4 (7-68)||(22801139-22801201)
chr4 (7-92)||(51015217-51015302)
chr4 (7-84)||(56030422-56030500)
chr4 (7-111)||(16453261-16453365)
chr4 (38-90)||(26557563-26557614)
chr4 (7-70)||(41997484-41997548)
chr4 (7-89)||(24878963-24879045)
chr4 (14-92)||(24880422-24880500)
chr4 (7-89)||(40091692-40091774)
chr4 (220-262)||(3937701-3937743)
chr4 (37-91)||(28453658-28453712)
chr4 (18-91)||(38270274-38270348)
chr4 (220-258)||(38270478-38270516)
chr4 (15-91)||(3937494-3937570)
chr4 (17-89)||(22134917-22134990)
chr4 (7-67)||(47274722-47274783)
chr4 (37-89)||(17662546-17662598)
chr4 (37-89)||(22132707-22132759)
chr4 (37-89)||(24348187-24348239)
chr4 (37-89)||(47211054-47211106)
chr4 (37-89)||(53405100-53405152)
chr4 (38-89)||(18709480-18709531)
chr4 (17-91)||(40999234-40999308)
chr4 (7-89)||(44600115-44600198)
chr4 (220-251)||(47564532-47564563)
chr4 (7-91)||(2891287-2891373)
chr4 (7-92)||(11434926-11435011)
chr4 (7-92)||(22044667-22044752)
chr4 (7-92)||(22046962-22047047)
chr4 (7-92)||(24888767-24888852)
chr4 (7-88)||(37313343-37313423)
chr4 (1-91)||(12102061-12102153)
chr4 (9-65)||(16932068-16932125)
chr4 (24-92)||(36919881-36919949)
chr4 (16-91)||(6132844-6132920)
chr4 (37-85)||(14787741-14787789)
[»] chr3 (68 HSPs)
chr3 (17-91)||(23633357-23633432)
chr3 (13-86)||(53597143-53597217)
chr3 (7-110)||(880727-880831)
chr3 (1-105)||(1618925-1619032)
chr3 (47-106)||(1620709-1620768)
chr3 (16-91)||(23636924-23637000)
chr3 (14-88)||(28761710-28761784)
chr3 (48-107)||(13419757-13419816)
chr3 (1-77)||(31151258-31151336)
chr3 (7-110)||(6231327-6231431)
chr3 (37-90)||(25635318-25635371)
chr3 (16-106)||(890055-890146)
chr3 (7-85)||(1313313-1313392)
chr3 (38-96)||(562069-562127)
chr3 (7-92)||(1321338-1321423)
chr3 (7-102)||(3314570-3314666)
chr3 (7-91)||(4560540-4560625)
chr3 (2-110)||(24177159-24177266)
chr3 (7-91)||(28137570-28137655)
chr3 (7-110)||(51675030-51675134)
chr3 (7-110)||(53591073-53591177)
chr3 (7-90)||(28100316-28100400)
chr3 (7-90)||(28180922-28181006)
chr3 (14-97)||(39715361-39715445)
chr3 (7-85)||(53915771-53915850)
chr3 (14-88)||(54691855-54691929)
chr3 (7-92)||(15780757-15780842)
chr3 (7-91)||(1626958-1627043)
chr3 (7-90)||(13420447-13420531)
chr3 (7-90)||(28102277-28102361)
chr3 (7-97)||(6484276-6484367)
chr3 (37-87)||(11007981-11008031)
chr3 (7-92)||(11170301-11170386)
chr3 (7-92)||(24979604-24979689)
chr3 (37-91)||(26762863-26762916)
chr3 (7-111)||(43423738-43423843)
chr3 (7-92)||(48361945-48362030)
chr3 (7-102)||(3306685-3306781)
chr3 (7-91)||(5927039-5927124)
chr3 (7-91)||(36011724-36011809)
chr3 (7-91)||(53468730-53468815)
chr3 (37-89)||(455802-455854)
chr3 (37-89)||(458179-458231)
chr3 (37-89)||(746650-746702)
chr3 (37-89)||(4104205-4104257)
chr3 (7-58)||(6561740-6561792)
chr3 (37-89)||(10621848-10621900)
chr3 (15-92)||(18162561-18162639)
chr3 (37-89)||(41849041-41849093)
chr3 (37-89)||(42990181-42990233)
chr3 (48-91)||(1673872-1673915)
chr3 (15-89)||(12268249-12268323)
chr3 (37-92)||(46966941-46966995)
chr3 (37-110)||(47149206-47149280)
chr3 (7-69)||(47701870-47701933)
chr3 (15-85)||(51943274-51943345)
chr3 (7-77)||(53917939-53918010)
chr3 (15-89)||(54884056-54884131)
chr3 (220-258)||(1627175-1627213)
chr3 (7-91)||(4308556-4308642)
chr3 (7-92)||(5191550-5191635)
chr3 (7-92)||(11163047-11163132)
chr3 (7-92)||(26720445-26720530)
chr3 (220-258)||(28137766-28137804)
chr3 (7-68)||(45882859-45882921)
chr3 (45-110)||(27420523-27420587)
chr3 (17-91)||(31021431-31021507)
chr3 (37-89)||(25533333-25533385)
[»] scaffold0224 (1 HSPs)
scaffold0224 (14-91)||(16102-16180)
[»] chr6 (42 HSPs)
chr6 (38-110)||(15719580-15719652)
chr6 (7-110)||(3390312-3390416)
chr6 (8-88)||(15346347-15346427)
chr6 (7-85)||(17852500-17852579)
chr6 (7-91)||(13057146-13057231)
chr6 (22-105)||(11138241-11138325)
chr6 (37-89)||(28038013-28038065)
chr6 (15-91)||(10584078-10584155)
chr6 (1-102)||(26945089-26945192)
chr6 (7-111)||(3630141-3630245)
chr6 (7-89)||(12195792-12195875)
chr6 (7-69)||(32447593-32447656)
chr6 (1-91)||(12186339-12186431)
chr6 (7-92)||(30729105-30729190)
chr6 (1-110)||(19696375-19696486)
chr6 (7-91)||(24338725-24338810)
chr6 (7-91)||(25477226-25477311)
chr6 (363-426)||(1310672-1310736)
chr6 (37-88)||(15366992-15367042)
chr6 (22-92)||(16455716-16455786)
chr6 (7-88)||(3234008-3234088)
chr6 (220-258)||(13039536-13039574)
chr6 (7-92)||(15532958-15533043)
chr6 (15-91)||(3632223-3632300)
chr6 (1-68)||(3028121-3028189)
chr6 (37-89)||(30034915-30034967)
chr6 (18-92)||(1072165-1072239)
chr6 (17-91)||(14466285-14466360)
chr6 (1-91)||(14507447-14507536)
chr6 (7-65)||(15541417-15541476)
chr6 (8-58)||(17012029-17012080)
chr6 (220-263)||(20219934-20219977)
chr6 (38-89)||(30967152-30967203)
chr6 (220-258)||(13056976-13057014)
chr6 (14-91)||(13870705-13870783)
chr6 (220-258)||(24338963-24339001)
chr6 (7-91)||(13039706-13039791)
chr6 (8-68)||(15530400-15530461)
chr6 (7-91)||(22490591-22490676)
chr6 (37-89)||(2629198-2629250)
chr6 (1-92)||(8995431-8995521)
chr6 (1-92)||(9019878-9019968)
[»] scaffold0057 (1 HSPs)
scaffold0057 (1-91)||(16918-17008)
[»] scaffold0004 (1 HSPs)
scaffold0004 (7-88)||(79789-79870)
[»] scaffold0154 (1 HSPs)
scaffold0154 (7-85)||(11750-11829)
[»] scaffold0045 (1 HSPs)
scaffold0045 (18-88)||(85161-85231)
[»] scaffold0131 (1 HSPs)
scaffold0131 (7-92)||(14945-15030)
[»] scaffold0133 (1 HSPs)
scaffold0133 (1-58)||(4773-4831)
[»] scaffold0339 (1 HSPs)
scaffold0339 (7-67)||(3947-4008)
[»] scaffold0031 (1 HSPs)
scaffold0031 (1-85)||(79117-79201)
[»] scaffold0250 (1 HSPs)
scaffold0250 (7-92)||(2806-2891)
[»] scaffold0005 (1 HSPs)
scaffold0005 (37-85)||(51941-51989)


Alignment Details
Target: chr5 (Bit Score: 455; Significance: 0; HSPs: 46)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 455; E-Value: 0
Query Start/End: Original strand, 1 - 459
Target Start/End: Complemental strand, 42770781 - 42770323
Alignment:
Q  1 ccttgttttcagtcccctctatctcaaggtttactcgatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaatctggcccataa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42770781 ccttgttttcagtcccctctatctcaaggtttactcgatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaatctggcccataa 42770682  T
Q  101 aaatacgtttcaaaaatatgctgttatgacacatcggccaccaattttcaccgtgggcatcgaaaattcacgcatcaaaaggctgcaatagcactgcaaa 200  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42770681 aaatacgtttcaaaaatatgttgttatgacacatcggccaccaattttcaccgtgggcatcgaaaattcacgcatcaaaaggctgcaatagcactgcaaa 42770582  T
Q  201 atcgggccccggattccataaatcggccaccgattttctgcttccagaatttcaattttgaggactgcttacttctttgtatcatgtgcacaatagatcc 300  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42770581 atcgggccccggattccataaatcggccaccgattttctgcttccagaatttcaattttgaggactgcttacttctttgtatcatgtgcacaatagatcc 42770482  T
Q  301 caggagctacaacctaaataaataaatgtttggttacttatgacattcaacaattttaactaaattaggatttcgtgaacatggctgttttgaatcctac 400  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42770481 caggagctacaacctaaataaataaatgtttggttacttatgacattcaacaattttaactaaattaggatttcgtgaacatggctgttttgaatcctac 42770382  T
Q  401 aaaaaagtgttgagacttggatttaggtgttttgaatctgatactctattgtttctgat 459  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42770381 aaaaaagtgttgagacttggatttaggtgttttgaatctgatactctattgtttctgat 42770323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 36208588 - 36208478
Alignment:
Q  1 ccttgttttcagtcccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaac-aaatctggcccat 98  Q
    |||||||||||| ||||||||||||||||||||||| ||||||| || ||||||||||||||||| |||||||   |||||||||| ||||| |||||||    
T  36208588 ccttgttttcagccccctctatctcaaggtttactctgatacaaggtctatatttatagtaaaagcatccctc-gcaaattggaacaaaatcaggcccat 36208490  T
Q  99 aaaaatacgttt 110  Q
    ||||||| ||||    
T  36208489 aaaaatatgttt 36208478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 7 - 110
Target Start/End: Complemental strand, 25904105 - 25904001
Alignment:
Q  7 tttcagtcccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaa-caaatctggcccataaaaat 104  Q
    |||||| ||||||||||||||||||||| | ||||||| || ||||||||||||||||| |||| |||| |||||| || |||||  |||||||||||||    
T  25904105 tttcagccccctctatctcaaggtttacactgatacaatgtctatatttatagtaaaagcatccttcat-aaattgaaaccaaattaggcccataaaaat 25904007  T
Q  105 acgttt 110  Q
    ||||||    
T  25904006 acgttt 25904001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 7 - 85
Target Start/End: Original strand, 26098528 - 26098607
Alignment:
Q  7 tttcagtcccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaac 85  Q
    |||||| |||||||||||| |||||||||| ||| ||| || ||||||||||||||||||||  ||||||||||||||||    
T  26098528 tttcagccccctctatctccaggtttactctgattcaaggtctatatttatagtaaaagtataactcataaaattggaac 26098607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 31472885 - 31472990
Alignment:
Q  1 ccttgttttcagtcccctctatctcaaggtttactcga-tacaaagtttatatttatagtaaaagtatccctcataaaattggaa-caaatctggcccat 98  Q
    ||||||||| || ||||||||||||||||||||| | | ||||| ||  |||||||||||||||| ||||||||| ||||||||| |||||| |||||||    
T  31472885 ccttgtttt-agccccctctatctcaaggtttacactaatacaatgtccatatttatagtaaaagcatccctcat-aaattggaaccaaatcaggcccat 31472982  T
Q  99 aaaaatac 106  Q
    ||||||||    
T  31472983 aaaaatac 31472990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 7 - 92
Target Start/End: Original strand, 2818613 - 2818698
Alignment:
Q  7 tttcagtcccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaatctg 92  Q
    |||||| |||||||||||||| |||||||| ||||||| || ||||||||||||||||||||| || | ||| ||||||||||||||    
T  2818613 tttcagccccctctatctcaaagtttactctgatacaaggtctatatttatagtaaaagtatcgctta-aaatttggaacaaatctg 2818698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 7 - 91
Target Start/End: Complemental strand, 17072885 - 17072800
Alignment:
Q  7 tttcagtcccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaatct 91  Q
    |||||| ||||||||||||||||||||| | ||||||| || ||||||||||||||||| ||||   |||||| ||||||||||||    
T  17072885 tttcagccccctctatctcaaggtttacactgatacaatgtctatatttatagtaaaagaatcctcaataaaaatggaacaaatct 17072800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 17 - 91
Target Start/End: Original strand, 2144878 - 2144954
Alignment:
Q  17 ctctatctcaaggtttac-tc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaatct 91  Q
    |||| ||||||||||||| || ||||||| || |||||||||||||||||||||||||| | |||||||||||||||    
T  2144878 ctctctctcaaggtttacatctgatacaaggtctatatttatagtaaaagtatccctcaaataattggaacaaatct 2144954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 7 - 85
Target Start/End: Complemental strand, 18596649 - 18596570
Alignment:
Q  7 tttcagtcccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaac 85  Q
    |||||| |||||||||| |||||||||||| ||| ||| || ||||||||||||||||||||  |||||||| |||||||    
T  18596649 tttcagccccctctatcccaaggtttactctgattcaaggtctatatttatagtaaaagtataactcataaatttggaac 18596570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 7 - 85
Target Start/End: Complemental strand, 26097735 - 26097656
Alignment:
Q  7 tttcagtcccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaac 85  Q
    |||||| |||||||||||||| |||||||| ||| ||| || ||||||||||||||||||||  |||||||| |||||||    
T  26097735 tttcagccccctctatctcaaagtttactctgattcaaggtctatatttatagtaaaagtataactcataaatttggaac 26097656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 7 - 92
Target Start/End: Original strand, 36402605 - 36402689
Alignment:
Q  7 tttcagtcccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaatctg 92  Q
    |||||| |||||||||||||| |||||||| |||| || || ||||||||||||||||||||| ||  ||||||| |||||||||||    
T  36402605 tttcagccccctctatctcaacgtttactctgatataaggtctatatttatagtaaaagtatcgct--taaaatttgaacaaatctg 36402689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 7 - 97
Target Start/End: Original strand, 37706057 - 37706148
Alignment:
Q  7 tttcagtcccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaatctggccca 97  Q
    |||||| ||||||||||||||||||||| | ||||||| || ||||||||||| ||||||| | | |||||||||| || ||||||| ||||    
T  37706057 tttcagccccctctatctcaaggtttacactgatacaatgtctatatttatagcaaaagtaactcccataaaattgtaaaaaatctgaccca 37706148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 7 - 68
Target Start/End: Original strand, 12556200 - 12556262
Alignment:
Q  7 tttcagtcccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatc 68  Q
    |||||| |||||||||||||| |||||||| ||||||| || |||||||||||||||||||||    
T  12556200 tttcagccccctctatctcaaagtttactctgatacaaggtctatatttatagtaaaagtatc 12556262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 7 - 92
Target Start/End: Original strand, 25921750 - 25921835
Alignment:
Q  7 tttcagtcccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaatctg 92  Q
    |||||| |||||||||||||| |||| ||| ||||||| || ||||||||||||||||||||| || | ||| ||||||||||||||    
T  25921750 tttcagccccctctatctcaaagtttgctctgatacaaggtctatatttatagtaaaagtatcgctta-aaatttggaacaaatctg 25921835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 14 - 91
Target Start/End: Original strand, 39398276 - 39398354
Alignment:
Q  14 cccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaatct 91  Q
    ||||||||||||||||||||| | | ||||| |||||||||||||||||||| ||||   |||||| ||||||||||||    
T  39398276 cccctctatctcaaggtttacaccggtacaatgtttatatttatagtaaaagaatcctcaataaaactggaacaaatct 39398354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 15 - 91
Target Start/End: Complemental strand, 2723961 - 2723884
Alignment:
Q  15 ccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaatct 91  Q
    |||||||||||||||||||| | ||||||| || ||||||||||||||||| ||||   ||||| |||||||||||||    
T  2723961 ccctctatctcaaggtttacactgatacaatgtctatatttatagtaaaagaatcctcaataaacttggaacaaatct 2723884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 7 - 91
Target Start/End: Complemental strand, 20045012 - 20044927
Alignment:
Q  7 tttcagtcccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaatct 91  Q
    |||||| ||||||| ||||||||||| ||| |||||||||  ||||||||||||||||| ||||   |||||| ||||||||||||    
T  20045012 tttcagccccctctgtctcaaggtttgctctgatacaaagcctatatttatagtaaaagaatcctcaataaaactggaacaaatct 20044927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 7 - 91
Target Start/End: Original strand, 34530943 - 34531027
Alignment:
Q  7 tttcagtcccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaatct 91  Q
    |||||| ||||||||||||||||||||||| ||| |||||| |||||||| |||||||| || ||| | |||| ||||||||||||    
T  34530943 tttcagccccctctatctcaaggtttactctgattcaaagtctatatttacagtaaaagaat-cctaaaaaaactggaacaaatct 34531027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 22 - 110
Target Start/End: Original strand, 1189905 - 1189996
Alignment:
Q  22 tctcaaggtttac-tc-gatacaaagtttatatttatagtaaaagta-tccctcataaaattggaa-caaatctggcccataaaaatacgttt 110  Q
    ||||||||||||| || ||||||| || ||||||||||||||||| | |||||||| ||||||||| |||||| |||||||||||||||||||    
T  1189905 tctcaaggtttacatctgatacaaggtctatatttatagtaaaagcaatccctcat-aaattggaaccaaatcaggcccataaaaatacgttt 1189996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 14 - 97
Target Start/End: Original strand, 17818773 - 17818857
Alignment:
Q  14 cccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaatctggccca 97  Q
    ||||||| ||||||||||||| | ||||||| || ||||||||||  ||||||| | | |||||||||| |||||||||||||||    
T  17818773 cccctctttctcaaggtttacactgatacaatgtctatatttataacaaaagtaactcccataaaattgtaacaaatctggccca 17818857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 14 - 92
Target Start/End: Complemental strand, 21948022 - 21947944
Alignment:
Q  14 cccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaatctg 92  Q
    ||||||||||||||  ||||||| ||||||| || ||||||||||||||||||||| || | ||| ||||||||||||||    
T  21948022 cccctctatctcaaaatttactctgatacaaggtctatatttatagtaaaagtatcgctta-aaatttggaacaaatctg 21947944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 7 - 85
Target Start/End: Original strand, 41585983 - 41586062
Alignment:
Q  7 tttcagtcccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaac 85  Q
    |||||| ||||| ||||||||||||||||| ||||||||   ||||||||||||||||||||  |||||| | |||||||    
T  41585983 tttcagccccctttatctcaaggtttactctgatacaaaacctatatttatagtaaaagtataactcatagatttggaac 41586062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 7 - 68
Target Start/End: Original strand, 20507739 - 20507801
Alignment:
Q  7 tttcagtcccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatc 68  Q
    |||||| |||||||||||||| |||||||| |||||||  | |||||||||||||||||||||    
T  20507739 tttcagccccctctatctcaaagtttactctgatacaagatctatatttatagtaaaagtatc 20507801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 50 - 83
Target Start/End: Complemental strand, 4897671 - 4897638
Alignment:
Q  50 tatttatagtaaaagtatccctcataaaattgga 83  Q
    ||||||||||||||||||||||||||||||||||    
T  4897671 tatttatagtaaaagtatccctcataaaattgga 4897638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 7 - 91
Target Start/End: Original strand, 10474600 - 10474685
Alignment:
Q  7 tttcagtcccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaatct 91  Q
    |||||| ||||||||| ||||||||||| | ||||||| || |||||||||||||| || ||||   |||||| ||||||||||||    
T  10474600 tttcagccccctctatttcaaggtttacactgatacaatgtctatatttatagtaagagaatcctcaataaaactggaacaaatct 10474685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 7 - 91
Target Start/End: Complemental strand, 20043052 - 20042967
Alignment:
Q  7 tttcagtcccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaatct 91  Q
    |||||| ||||||||||||||||||| ||  |||||||||  ||||||||||||||||| ||||   |||||| ||||| ||||||    
T  20043052 tttcagccccctctatctcaaggtttgctatgatacaaagcctatatttatagtaaaagaatcctcaataaaactggaataaatct 20042967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 7 - 91
Target Start/End: Complemental strand, 24126858 - 24126773
Alignment:
Q  7 tttcagtcccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaatct 91  Q
    |||||| ||| ||||||||||||||||| | |||| || || ||||||||||||||||| ||||   |||||| ||||||||||||    
T  24126858 tttcagccccatctatctcaaggtttacactgatataatgtctatatttatagtaaaagaatcctcaataaaactggaacaaatct 24126773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 37 - 110
Target Start/End: Complemental strand, 29748312 - 29748240
Alignment:
Q  37 gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaatctggcccataaaaatacgttt 110  Q
    ||||||| || ||||||||||||||||| |||||||| ||| ||||||||||||    ||||||||||||||||    
T  29748312 gatacaaggtctatatttatagtaaaagcatccctca-aaatttggaacaaatccaaaccataaaaatacgttt 29748240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 37 - 89
Target Start/End: Original strand, 3373349 - 3373401
Alignment:
Q  37 gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaat 89  Q
    ||||||| || ||||||||||||||||||||  |||||||| |||||||||||    
T  3373349 gatacaaggtctatatttatagtaaaagtataactcataaatttggaacaaat 3373401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 37 - 89
Target Start/End: Complemental strand, 10586810 - 10586758
Alignment:
Q  37 gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaat 89  Q
    ||||||| || ||||||||||||||||||||  |||||||| |||||||||||    
T  10586810 gatacaaggtctatatttatagtaaaagtataactcataaatttggaacaaat 10586758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 37 - 89
Target Start/End: Complemental strand, 15552206 - 15552154
Alignment:
Q  37 gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaat 89  Q
    ||||||| || ||||||||||||||||||||  |||||||| |||||||||||    
T  15552206 gatacaaggtctatatttatagtaaaagtataactcataaatttggaacaaat 15552154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 37 - 89
Target Start/End: Complemental strand, 18468978 - 18468926
Alignment:
Q  37 gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaat 89  Q
    ||||||| || ||||||||||||||||||||  |||||||| |||||||||||    
T  18468978 gatacaaggtctatatttatagtaaaagtataactcataaatttggaacaaat 18468926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 37 - 89
Target Start/End: Complemental strand, 25803987 - 25803935
Alignment:
Q  37 gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaat 89  Q
    ||||||| || ||||||||||||||||||||  |||||||| |||||||||||    
T  25803987 gatacaaggtctatatttatagtaaaagtataactcataaatttggaacaaat 25803935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 37 - 89
Target Start/End: Complemental strand, 27910416 - 27910364
Alignment:
Q  37 gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaat 89  Q
    ||||||| || ||||||||||||||||||||  |||||||| |||||||||||    
T  27910416 gatacaaggtctatatttatagtaaaagtataactcataaatttggaacaaat 27910364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 37 - 89
Target Start/End: Complemental strand, 27912501 - 27912449
Alignment:
Q  37 gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaat 89  Q
    ||||||| || ||||||||||||||||||||  |||||||| |||||||||||    
T  27912501 gatacaaggtctatatttatagtaaaagtataactcataaatttggaacaaat 27912449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 7 - 66
Target Start/End: Complemental strand, 40221524 - 40221464
Alignment:
Q  7 tttcagtcccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagta 66  Q
    |||||| ||||||||||||||||||||||| ||  ||| || |||||||||||||||||||    
T  40221524 tttcagccccctctatctcaaggtttactctgagtcaatgtctatatttatagtaaaagta 40221464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 17 - 91
Target Start/End: Original strand, 15225069 - 15225143
Alignment:
Q  17 ctctatctcaaggtttac-tcgatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaatct 91  Q
    |||| ||||||||||||| ||| ||||| |||||| ||||||||||||| || ||| | |||||||||||||||||    
T  15225069 ctctctctcaaggtttacatcgttacaaggtttatgtttatagtaaaagcat-ccttaaaaaattggaacaaatct 15225143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 220 - 258
Target Start/End: Complemental strand, 695696 - 695658
Alignment:
Q  220 aaatcggccaccgattttctgcttccagaatttcaattt 258  Q
    |||||||||||| |||||| |||||||||||||||||||    
T  695696 aaatcggccaccaattttcagcttccagaatttcaattt 695658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 7 - 92
Target Start/End: Complemental strand, 4236631 - 4236546
Alignment:
Q  7 tttcagtcccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaatctg 92  Q
    |||||| ||||| |||||| | |||| ||| ||||||| || ||||||||||||||||||||| || | ||| ||||||||||||||    
T  4236631 tttcagccccctttatctccaagtttgctctgatacaaggtctatatttatagtaaaagtatcgctta-aaatttggaacaaatctg 4236546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 37 - 110
Target Start/End: Original strand, 16092512 - 16092585
Alignment:
Q  37 gatacaaagtttatatttatagtaaaagtatccctcataaaattggaa-caaatctggcccataaaaatacgttt 110  Q
    |||||||||| ||||||| |||||||   ||||||||| ||||||||| |||||| ||||||||||| |||||||    
T  16092512 gatacaaagtctatatttctagtaaagcaatccctcat-aaattggaaccaaatcaggcccataaaactacgttt 16092585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 7 - 91
Target Start/End: Complemental strand, 16776160 - 16776075
Alignment:
Q  7 tttcagtcccctctatctcaaggtttactc-gatacaaagtttata-tttatagtaaaagtatccctcataaaattggaacaaatct 91  Q
    |||||| |||||||||||||| |||| ||| ||||||| || |||| ||||||||||||||||| || | ||| |||||||||||||    
T  16776160 tttcagccccctctatctcaaagtttgctcagatacaaggtctatattttatagtaaaagtatcgctta-aaatttggaacaaatct 16776075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 225 - 258
Target Start/End: Complemental strand, 20044817 - 20044784
Alignment:
Q  225 ggccaccgattttctgcttccagaatttcaattt 258  Q
    ||||||||||||||||||||||||||| ||||||    
T  20044817 ggccaccgattttctgcttccagaattccaattt 20044784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 37 - 90
Target Start/End: Complemental strand, 25837990 - 25837938
Alignment:
Q  37 gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaatc 90  Q
    ||||||||||||| ||||||| |||||| |||||| | ||||||||||||||||    
T  25837990 gatacaaagtttaaatttatattaaaagcatccct-aaaaaattggaacaaatc 25837938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 9020231 - 9020120
Alignment:
Q  1 ccttgttttcagtcccctctatctcaaggtttac-tc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaac-aaatctggccca 97  Q
    ||||||||||||  ||||||| | |||||||||| || ||||||| || | ||||||||||||||  ||| ||||| |||||||||| ||||| | ||||    
T  9020231 ccttgttttcagctccctctagcacaaggtttacatctgatacaaggtatgtatttatagtaaaaacatctctcat-aaattggaacaaaatcagaccca 9020133  T
Q  98 taaaaatacgttt 110  Q
    |||||||| ||||    
T  9020132 taaaaatatgttt 9020120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 37 - 89
Target Start/End: Complemental strand, 18466651 - 18466599
Alignment:
Q  37 gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaat 89  Q
    ||||||| || |||||||||||||||| |||  |||||||| |||||||||||    
T  18466651 gatacaaggtctatatttatagtaaaaatataactcataaatttggaacaaat 18466599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 37 - 65
Target Start/End: Complemental strand, 35430148 - 35430120
Alignment:
Q  37 gatacaaagtttatatttatagtaaaagt 65  Q
    |||||||||||||||||||||||||||||    
T  35430148 gatacaaagtttatatttatagtaaaagt 35430120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 81; Significance: 6e-38; HSPs: 61)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 7 - 110
Target Start/End: Original strand, 49495478 - 49495582
Alignment:
Q  7 tttcagtcccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaatctggcccataaaaata 105  Q
    |||||| ||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||    
T  49495478 tttcagccccctctatctcaaggtttactctgatacaaagtctatatttatagtaaaagtatccctcataaaattcgaacaaatctggctcataaaaata 49495577  T
Q  106 cgttt 110  Q
    |||||    
T  49495578 cgttt 49495582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 5 - 137
Target Start/End: Original strand, 15669667 - 15669802
Alignment:
Q  5 gttttcagtcccctctatctcaaggtttac-tc-gatacaaagtttatatttatagtaaaagtatccc-tcataaaattggaacaaatctggcccataaa 101  Q
    |||||||| |||||||||| ||| |||||| || | ||||| || | ||||||||||||||||||||| ||| |||| ||||||||||||||||||||||    
T  15669667 gttttcagccccctctatcccaatgtttacatctgctacaaggtctgtatttatagtaaaagtatcccctcaaaaaactggaacaaatctggcccataaa 15669766  T
Q  102 aatacgtttcaaaaatatgctgttatgacacatcgg 137  Q
    ||||||||| ||||||||||||||| ||||||||||    
T  15669767 aatacgtttaaaaaatatgctgttacgacacatcgg 15669802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 14 - 96
Target Start/End: Complemental strand, 16431096 - 16431013
Alignment:
Q  14 cccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaatctggccc 96  Q
    ||||||||||||||||||| ||| ||||||||   |||||||||||||||||||||||||||||||||||||||||||||||||    
T  16431096 cccctctatctcaaggtttgctctgatacaaaacctatatttatagtaaaagtatccctcataaaattggaacaaatctggccc 16431013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 14 - 110
Target Start/End: Original strand, 8347555 - 8347652
Alignment:
Q  14 cccctctatctcaaggtttac-tc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaatctggcccataaaaatacgttt 110  Q
    ||||||||||||||||||||| || ||||||| || ||| ||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||    
T  8347555 cccctctatctcaaggtttacatctgatacaaggtctat-tttatagtaaaagtacccctcataaaattggaacaaatctgacccataaaaatacgttt 8347652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 7 - 123
Target Start/End: Original strand, 31423153 - 31423269
Alignment:
Q  7 tttcagtcccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaatctggcccataaaaata 105  Q
    |||||| ||||||||||||||||||||| | ||||||| | |||||||||||||||||||||| | ||||||||||||||||||||| |||| |||||||    
T  31423153 tttcagccccctctatctcaaggtttacactgatacaatgcttatatttatagtaaaagtatctcccataaaattggaacaaatctgaccca-aaaaata 31423251  T
Q  106 cgtttcaaaaatatgctg 123  Q
     ||||   ||||||||||    
T  31423252 tgtttttgaaatatgctg 31423269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 14 - 111
Target Start/End: Original strand, 9241372 - 9241468
Alignment:
Q  14 cccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaatctggcccataaaaatacgtttc 111  Q
    ||||||||||| ||||||||||| |||||||||  ||||||||||||||||||| ||| ||||||||||||||||||||| |||  |||||||||||||    
T  9241372 cccctctatcttaaggtttactctgatacaaagcctatatttatagtaaaagtaacccccataaaattggaacaaatctgaccc--aaaaatacgtttc 9241468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 14 - 91
Target Start/End: Complemental strand, 42922229 - 42922151
Alignment:
Q  14 cccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaatct 91  Q
    ||||||||||| ||||||||||| |||||||| | |||||||||||||||||||||||||||||| |||||||||||||    
T  42922229 cccctctatcttaaggtttactctgatacaaaatctatatttatagtaaaagtatccctcataaatttggaacaaatct 42922151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 7 - 110
Target Start/End: Original strand, 11457754 - 11457858
Alignment:
Q  7 tttcagtcccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaa-caaatctggcccataaaaat 104  Q
    |||||| ||||||||||||||||||||| | ||||||| || ||||||||||||||||| ||||||||| ||||||||| |||||| | |||||||||||    
T  11457754 tttcagccccctctatctcaaggtttacactgatacaatgtctatatttatagtaaaagcatccctcat-aaattggaaccaaatcagacccataaaaat 11457852  T
Q  105 acgttt 110  Q
    ||||||    
T  11457853 acgttt 11457858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 7 - 97
Target Start/End: Complemental strand, 6756529 - 6756438
Alignment:
Q  7 tttcagtcccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaatctggccca 97  Q
    |||||||||||||||| ||||||||||| | ||||||| || ||||||||||| ||||||| | |||||||||||| |||||||||||||||    
T  6756529 tttcagtcccctctatttcaaggtttacaccgatacaatgtctatatttatagcaaaagtaactctcataaaattgtaacaaatctggccca 6756438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 7 - 110
Target Start/End: Original strand, 50079100 - 50079204
Alignment:
Q  7 tttcagtcccctctatctcaaggtttactcga-tacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaatctggcccataaaaata 105  Q
    |||||| ||||||||||||||||||||| | | ||||| || ||||||||||||||||| |||||||||||| ||| | |||||| |  |||||||||||    
T  50079100 tttcagccccctctatctcaaggtttacactaatacaatgtctatatttatagtaaaagcatccctcataaatttgaaccaaatcagatccataaaaata 50079199  T
Q  106 cgttt 110  Q
    |||||    
T  50079200 cgttt 50079204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 2 - 92
Target Start/End: Original strand, 30790668 - 30790758
Alignment:
Q  2 cttgttttcagtcccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaatctg 92  Q
    |||||||||||  |||||||||||||||||||||| ||||||| || ||||||||||||||||||||| || | ||| ||||||||||||||    
T  30790668 cttgttttcagctccctctatctcaaggtttactctgatacaatgtctatatttatagtaaaagtatcgctta-aaatttggaacaaatctg 30790758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 48 - 110
Target Start/End: Original strand, 8349370 - 8349432
Alignment:
Q  48 tatatttatagtaaaagtatccctcataaaattggaacaaatctggcccataaaaatacgttt 110  Q
    |||||||||| ||||| |||||||||||||||||||||||||||| ||||||||| |||||||    
T  8349370 tatatttataataaaattatccctcataaaattggaacaaatctgacccataaaattacgttt 8349432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 18 - 106
Target Start/End: Original strand, 50076962 - 50077051
Alignment:
Q  18 tctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaa-caaatctggcccataaaaatac 106  Q
    ||||||||||||||||| | ||||||| || ||||||||||||||||| ||||||||| ||||||||| |||||| |||||||||||||||    
T  50076962 tctatctcaaggtttacactgatacaatgtctatatttatagtaaaagcatccctcat-aaattggaaccaaatcaggcccataaaaatac 50077051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 7 - 91
Target Start/End: Original strand, 18800848 - 18800932
Alignment:
Q  7 tttcagtcccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaatct 91  Q
    |||||| ||| | ||||||||||||||||| ||||||| || |||||||||||||||||||| |||||||||||||||| ||||||    
T  18800848 tttcagccccttgtatctcaaggtttactctgatacaaggtctatatttatagtaaaagtat-cctcataaaattggaaaaaatct 18800932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 25 - 91
Target Start/End: Complemental strand, 43104143 - 43104076
Alignment:
Q  25 caaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaatct 91  Q
    |||||||||||| ||||||| || |||||||||||||||||||||||||| |||| ||||||||||||    
T  43104143 caaggtttactctgatacaaggtctatatttatagtaaaagtatccctcaaaaaactggaacaaatct 43104076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 7 - 92
Target Start/End: Complemental strand, 41646922 - 41646837
Alignment:
Q  7 tttcagtcccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaatctg 92  Q
    |||||| |||||||||||||| |||||||| ||||||| || ||||||||||||||||||||| || | ||| ||||||||||||||    
T  41646922 tttcagccccctctatctcaaagtttactctgatacaaggtctatatttatagtaaaagtatcgctta-aaatttggaacaaatctg 41646837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 7 - 63
Target Start/End: Original strand, 25251554 - 25251611
Alignment:
Q  7 tttcagtcccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaa 63  Q
    |||||| ||||||||||||||||||||||| |||||||||| ||||||||||||||||    
T  25251554 tttcagccccctctatctcaaggtttactctgatacaaagtctatatttatagtaaaa 25251611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 26613511 - 26613622
Alignment:
Q  1 ccttgttttcagtcccctcta--tctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaatctggccca 97  Q
    |||||||||||| ||||||||  |||||||||||  || ||||||| || ||||||||||| ||||| |||||||| |||||||||||||||||  | ||    
T  26613511 ccttgttttcagccccctctatctctcaaggtttcatctgatacaaggtctatatttatagcaaaagaatccctca-aaaattggaacaaatctcacgca 26613609  T
Q  98 taaaaatacgttt 110  Q
    |||||||| ||||    
T  26613610 taaaaatatgttt 26613622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 7 - 94
Target Start/End: Complemental strand, 16428655 - 16428567
Alignment:
Q  7 tttcagtcccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaatctggc 94  Q
    |||||| ||||||||||| | ||||| ||| |||| |||   |||||||||||||||||||||||| |||||||| |||||||||||||    
T  16428655 tttcagccccctctatctaatggtttgctctgatataaaacctatatttatagtaaaagtatcccttataaaattcgaacaaatctggc 16428567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 14 - 89
Target Start/End: Complemental strand, 48665166 - 48665090
Alignment:
Q  14 cccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaat 89  Q
    ||||||||||| ||||||||||| ||| ||| || ||||||||||||||||||||  |||||||| |||||||||||    
T  48665166 cccctctatcttaaggtttactctgattcaaggtctatatttatagtaaaagtataactcataaatttggaacaaat 48665090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 7 - 85
Target Start/End: Original strand, 28998532 - 28998611
Alignment:
Q  7 tttcagtcccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaac 85  Q
    |||||| | |||||||||||| |||||||| ||| |||||| ||||||||||||||||||||  |||||||| |||||||    
T  28998532 tttcagcctcctctatctcaaagtttactctgattcaaagtctatatttatagtaaaagtataactcataaatttggaac 28998611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 7 - 85
Target Start/End: Original strand, 29004248 - 29004327
Alignment:
Q  7 tttcagtcccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaac 85  Q
    |||||| | |||||||||||| |||||||| ||| |||||| ||||||||||||||||||||  |||||||| |||||||    
T  29004248 tttcagcctcctctatctcaaagtttactctgattcaaagtctatatttatagtaaaagtataactcataaatttggaac 29004327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 14 - 88
Target Start/End: Complemental strand, 40133930 - 40133856
Alignment:
Q  14 cccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaa 88  Q
    ||||| ||||||||| ||||||| |||||||||  ||||||||||||||||| ||||||||| |||||||||||||    
T  40133930 cccctatatctcaagatttactctgatacaaagcctatatttatagtaaaagaatccctcat-aaattggaacaaa 40133856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 7 - 92
Target Start/End: Complemental strand, 13215083 - 13214998
Alignment:
Q  7 tttcagtcccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaatctg 92  Q
    |||||| ||||||||||||||  ||||||| ||||||| || ||||||||||||||||||||| || | ||| ||||||||||||||    
T  13215083 tttcagccccctctatctcaaaatttactctgatacaaggtctatatttatagtaaaagtatcgctta-aaatttggaacaaatctg 13214998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 7 - 88
Target Start/End: Complemental strand, 17318895 - 17318814
Alignment:
Q  7 tttcagtcccctctatctcaaggtttact-cgatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaa 88  Q
    |||||| ||||||||||||||||||||||  ||||||||   ||||||||||||||||  ||||||||| |||||||||||||    
T  17318895 tttcagccccctctatctcaaggtttactatgatacaaaacctatatttatagtaaaaaaatccctcat-aaattggaacaaa 17318814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 7 - 92
Target Start/End: Original strand, 28207345 - 28207430
Alignment:
Q  7 tttcagtcccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaatctg 92  Q
    |||||| |||||||||||||| ||||| || ||||||| || ||||||||||||||||||||| || | ||| ||||||||||||||    
T  28207345 tttcagccccctctatctcaaagtttagtctgatacaaggtctatatttatagtaaaagtatcgctta-aaatttggaacaaatctg 28207430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 7 - 68
Target Start/End: Original strand, 38925757 - 38925819
Alignment:
Q  7 tttcagtcccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatc 68  Q
    |||||| |||||||||||||| |||||||| ||||||| || |||||||||||||||||||||    
T  38925757 tttcagccccctctatctcaaagtttactctgatacaaggtctatatttatagtaaaagtatc 38925819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 14 - 111
Target Start/End: Complemental strand, 47451643 - 47451547
Alignment:
Q  14 cccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaatctggcccataaaaatacgtttc 111  Q
    |||||||||||||| |||||||| ||||||| || ||||||||||||||||||||| || | | | ||||||||||||||  ||| |||||||||||||    
T  47451643 cccctctatctcaaagtttactctgatacaaggtctatatttatagtaaaagtatcgctta-atatttggaacaaatctgcacca-aaaaatacgtttc 47451547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 15 - 91
Target Start/End: Original strand, 50248859 - 50248936
Alignment:
Q  15 ccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaatct 91  Q
    |||||||||||||||||||| | ||||||| || ||||||||||||||||| ||||   |||||| ||||||||||||    
T  50248859 ccctctatctcaaggtttacactgatacaatgtctatatttatagtaaaagaatcctcaataaaactggaacaaatct 50248936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 22 - 106
Target Start/End: Original strand, 12302803 - 12302890
Alignment:
Q  22 tctcaaggtttac-tc-gatacaaagtttatatttatagtaaaagt-atccctcataaaattggaa-caaatctggcccataaaaatac 106  Q
    ||||||||||||| || ||||||| || |||||||||||||||||| ||||||||| ||||||||| |||||| |||||||||||||||    
T  12302803 tctcaaggtttacatctgatacaaggtctatatttatagtaaaagtaatccctcat-aaattggaaccaaatcaggcccataaaaatac 12302890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 6 - 77
Target Start/End: Original strand, 50307825 - 50307897
Alignment:
Q  6 ttttcagtcccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaa 77  Q
    ||||||| ||| | ||||||||||||||||  ||||||||| |||||||||||||||||| ||||||| ||||    
T  50307825 ttttcagccccatatatctcaaggtttactttgatacaaagcttatatttatagtaaaagaatccctcgtaaa 50307897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 7 - 97
Target Start/End: Original strand, 14183865 - 14183955
Alignment:
Q  7 tttcagtcccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaatctggccca 97  Q
    |||||| || |||||||||||||||||||| ||||||  || ||||||||||||||||| || ||| | |||| | ||||||||||||||||    
T  14183865 tttcagccctctctatctcaaggtttactctgatacatggtctatatttatagtaaaagaat-cctaaaaaaactagaacaaatctggccca 14183955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 7 - 89
Target Start/End: Original strand, 17186407 - 17186490
Alignment:
Q  7 tttcagtcccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaat 89  Q
    |||||| ||||||||||||||||||| ||| |||||||| | |||||||||| |||||| ||||   |||||| ||||||||||    
T  17186407 tttcagccccctctatctcaaggtttgctctgatacaaaatctatatttatattaaaagaatcctcaataaaactggaacaaat 17186490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 7 - 93
Target Start/End: Complemental strand, 18307111 - 18307024
Alignment:
Q  7 tttcagtcccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaatctgg 93  Q
    |||||| ||||||||||||||||||||| | ||||||| || ||||||||||| |||| || | | |||||||||| |||||| ||||    
T  18307111 tttcagccccctctatctcaaggtttacactgatacaatgtctatatttatagcaaaaatagctcccataaaattgtaacaaagctgg 18307024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 220 - 258
Target Start/End: Original strand, 25248989 - 25249027
Alignment:
Q  220 aaatcggccaccgattttctgcttccagaatttcaattt 258  Q
    |||||||||||||||||||||||||||||||| ||||||    
T  25248989 aaatcggccaccgattttctgcttccagaattccaattt 25249027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 220 - 258
Target Start/End: Original strand, 25251750 - 25251788
Alignment:
Q  220 aaatcggccaccgattttctgcttccagaatttcaattt 258  Q
    |||||||||||||||||||||||||||||||| ||||||    
T  25251750 aaatcggccaccgattttctgcttccagaattccaattt 25251788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 37 - 91
Target Start/End: Complemental strand, 27916468 - 27916415
Alignment:
Q  37 gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaatct 91  Q
    ||||||| || |||||||||||||||||||||||||  |||||||||||||||||    
T  27916468 gatacaatgtctatatttatagtaaaagtatccctc-caaaattggaacaaatct 27916415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 30738899 - 30739004
Alignment:
Q  1 ccttgttttcagtcccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaatctggcccata 99  Q
    |||||||||||||| ||| |||||||||||||  || ||||||| |  ||| ||||||||||||| || ||||| |||||||||| ||||||  | ||||    
T  30738899 ccttgttttcagtcacctgtatctcaaggtttcatctgatacaaggactatgtttatagtaaaagaatgcctca-aaaattggaataaatctcacgcata 30738997  T
Q  100 aaaatac 106  Q
    |||||||    
T  30738998 aaaatac 30739004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 17 - 89
Target Start/End: Complemental strand, 17324057 - 17323984
Alignment:
Q  17 ctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaat 89  Q
    ||||||||||||||||||||  ||||||||| |||||||||| |||||| ||||   |||||| ||||||||||    
T  17324057 ctctatctcaaggtttactctaatacaaagtctatatttataataaaagaatcctcaataaaactggaacaaat 17323984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 17 - 89
Target Start/End: Complemental strand, 24325648 - 24325575
Alignment:
Q  17 ctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaat 89  Q
    |||| |||||| |||| ||| ||||||| || ||||||||||||||||||||  |||||||| |||||||||||    
T  24325648 ctctctctcaaagtttgctctgatacaaggtctatatttatagtaaaagtataactcataaatttggaacaaat 24325575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 7 - 63
Target Start/End: Original strand, 25248793 - 25248850
Alignment:
Q  7 tttcagtcccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaa 63  Q
    |||||| ||||||||||||||||||||||| |||||||||| ||||||| ||| ||||    
T  25248793 tttcagccccctctatctcaaggtttactctgatacaaagtctatatttctagaaaaa 25248850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 14 - 58
Target Start/End: Original strand, 26520404 - 26520449
Alignment:
Q  14 cccctctatctcaaggtttactc-gatacaaagtttatatttatag 58  Q
    ||||||||||||||||||||||| |||||||||| |||||||||||    
T  26520404 cccctctatctcaaggtttactctgatacaaagtctatatttatag 26520449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 37 - 89
Target Start/End: Original strand, 2510638 - 2510690
Alignment:
Q  37 gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaat 89  Q
    ||||||| || ||||||||||||||||||||  |||||||| |||||||||||    
T  2510638 gatacaaggtctatatttatagtaaaagtataactcataaatttggaacaaat 2510690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 14 - 85
Target Start/End: Original strand, 6995986 - 6996058
Alignment:
Q  14 cccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaac 85  Q
    ||||||||||||||| ||||||| ||| ||| || |||||||||| |||||||||  |||||||| |||||||    
T  6995986 cccctctatctcaagatttactctgattcaaggtctatatttataataaaagtataactcataaatttggaac 6996058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 37 - 89
Target Start/End: Original strand, 9459733 - 9459785
Alignment:
Q  37 gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaat 89  Q
    ||||||| || ||||||||||||||||||||  |||||||| |||||||||||    
T  9459733 gatacaaggtctatatttatagtaaaagtataactcataaatttggaacaaat 9459785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 37 - 89
Target Start/End: Original strand, 9463560 - 9463612
Alignment:
Q  37 gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaat 89  Q
    ||||||| || ||||||||||||||||||||  |||||||| |||||||||||    
T  9463560 gatacaaggtctatatttatagtaaaagtataactcataaatttggaacaaat 9463612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 37 - 89
Target Start/End: Original strand, 31735835 - 31735887
Alignment:
Q  37 gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaat 89  Q
    ||||||| || ||||||||||||||||||||  |||||||| |||||||||||    
T  31735835 gatacaaggtctatatttatagtaaaagtataactcataaatttggaacaaat 31735887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 37 - 89
Target Start/End: Original strand, 46432038 - 46432090
Alignment:
Q  37 gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaat 89  Q
    ||||||| || ||||||||||||||||||||  |||||||| |||||||||||    
T  46432038 gatacaaggtctatatttatagtaaaagtataactcataaatttggaacaaat 46432090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 37 - 89
Target Start/End: Complemental strand, 47906235 - 47906183
Alignment:
Q  37 gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaat 89  Q
    ||||||| || ||||||||||||||||||||  |||||||| |||||||||||    
T  47906235 gatacaaggtctatatttatagtaaaagtataactcataaatttggaacaaat 47906183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 7 - 85
Target Start/End: Original strand, 2949510 - 2949589
Alignment:
Q  7 tttcagtcccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaac 85  Q
    |||||| ||||||||||||||||||| ||| ||| |||  | ||||||||| ||||||||||  |||||||| |||||||    
T  2949510 tttcagccccctctatctcaaggttttctcggattcaatatctatatttattgtaaaagtataactcataaatttggaac 2949589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 38 - 97
Target Start/End: Complemental strand, 14996921 - 14996863
Alignment:
Q  38 atacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaatctggccca 97  Q
    |||||||||||||||||||||| |||| |||||| | |||||||||||||| | ||||||    
T  14996921 atacaaagtttatatttatagtgaaagcatccctta-aaaattggaacaaaacaggccca 14996863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 38 - 89
Target Start/End: Original strand, 27339445 - 27339496
Alignment:
Q  38 atacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaat 89  Q
    |||||| || ||||||||||||||||||||  |||||||| |||||||||||    
T  27339445 atacaaggtctatatttatagtaaaagtataactcataaatttggaacaaat 27339496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 17 - 111
Target Start/End: Complemental strand, 39462511 - 39462417
Alignment:
Q  17 ctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaatctggcccataaaaatacgtttc 111  Q
    ||||||||||| |||||||| ||||||| || |||||||||||| |||||||  || | ||| ||||||||||||||  ||  |||||||||||||    
T  39462511 ctctatctcaaagtttactctgatacaaggtctatatttatagtgaaagtattactta-aaatttggaacaaatctgcacccaaaaaatacgtttc 39462417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 7 - 92
Target Start/End: Complemental strand, 15823548 - 15823463
Alignment:
Q  7 tttcagtcccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaatctg 92  Q
    |||||| ||||| |||||| | |||||||  ||||||| || ||||||||||||||||||||| || | ||| ||||||||||||||    
T  15823548 tttcagccccctttatctctaagtttactttgatacaaggtctatatttatagtaaaagtatcgctta-aaatttggaacaaatctg 15823463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 220 - 258
Target Start/End: Original strand, 17186623 - 17186661
Alignment:
Q  220 aaatcggccaccgattttctgcttccagaatttcaattt 258  Q
    ||||| ||||||||||||||||||||||| |||||||||    
T  17186623 aaatcagccaccgattttctgcttccagattttcaattt 17186661  T

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Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 7 - 89
Target Start/End: Complemental strand, 28842497 - 28842413
Alignment:
Q  7 tttcagtcccctctatctc--aaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaat 89  Q
    |||||| ||||||||||||  || |||| ||| ||||||| |||||||||||||||||||||||| || | ||| |||||||||||    
T  28842497 tttcagccccctctatctctcaaagtttgctctgatacaaggtttatatttatagtaaaagtatcgctta-aaatttggaacaaat 28842413  T

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Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 14 - 91
Target Start/End: Complemental strand, 31489910 - 31489832
Alignment:
Q  14 cccctctatctcaaggtttactcga-tacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaatct 91  Q
    ||||||||||||||||||||| | | ||||| || ||||||||||||||||| ||||   |||||| | ||||||||||    
T  31489910 cccctctatctcaaggtttacactaatacaatgtctatatttatagtaaaagaatcctcaataaaactagaacaaatct 31489832  T

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Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 7 - 92
Target Start/End: Complemental strand, 51750041 - 51749956
Alignment:
Q  7 tttcagtcccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaatctg 92  Q
    |||||| |||||||||||| | |||| ||| ||||||| || |||||||||||||||||| || || | ||| ||||||||||||||    
T  51750041 tttcagccccctctatctccaagtttgctctgatacaaggtctatatttatagtaaaagtttcgctta-aaatttggaacaaatctg 51749956  T

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Target: chr1; HSP #59
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 7 - 92
Target Start/End: Complemental strand, 51752367 - 51752282
Alignment:
Q  7 tttcagtcccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaatctg 92  Q
    |||||| |||||||||||| | |||| ||| ||||||| || |||||||||||||||||| || || | ||| ||||||||||||||    
T  51752367 tttcagccccctctatctccaagtttgctctgatacaaggtctatatttatagtaaaagtttcgctta-aaatttggaacaaatctg 51752282  T

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Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 37 - 110
Target Start/End: Complemental strand, 155671 - 155599
Alignment:
Q  37 gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaatctggcccataaaaatacgttt 110  Q
    |||||||  |||| |||||||||||||| |||||||| ||||||| |||||||||  | |||||||||| ||||    
T  155671 gatacaagatttacatttatagtaaaaggatccctca-aaaattgaaacaaatctcacgcataaaaataggttt 155599  T

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Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 7 - 67
Target Start/End: Original strand, 14098249 - 14098310
Alignment:
Q  7 tttcagtcccctctatctcaaggttta-ctcgatacaaagtttatatttatagtaaaagtat 67  Q
    ||||||||||||||||||||| |||||  | ||||||| || |||||||||||| |||||||    
T  14098249 tttcagtcccctctatctcaaagtttagtttgatacaaggtctatatttatagtgaaagtat 14098310  T

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Target: chr2 (Bit Score: 77; Significance: 1e-35; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 7 - 106
Target Start/End: Original strand, 37963204 - 37963304
Alignment:
Q  7 tttcagtcccctctatctcaaggtttactcg-atacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaatctggcccataaaaata 105  Q
    |||||| |||||||||||||||||||||||  ||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  37963204 tttcagccccctctatctcaaggtttactcttatacaaagtctatatttatagtaaaagtatccatcataaaattggaacaaatctggcccataaaaata 37963303  T
Q  106 c 106  Q
    |    
T  37963304 c 37963304  T

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Target: chr2; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 7 - 110
Target Start/End: Complemental strand, 17849095 - 17848991
Alignment:
Q  7 tttcagtcccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaa-caaatctggcccataaaaat 104  Q
    |||||| ||||||||||||||||||||| | ||||||| |||||||||||||||||||| ||||||||| ||||||||| |||||| |||||||| ||||    
T  17849095 tttcagccccctctatctcaaggtttacactgatacaatgtttatatttatagtaaaagcatccctcat-aaattggaaccaaatcaggcccatataaat 17848997  T
Q  105 acgttt 110  Q
    ||||||    
T  17848996 acgttt 17848991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 7 - 110
Target Start/End: Original strand, 31733042 - 31733146
Alignment:
Q  7 tttcagtcccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaa-caaatctggcccataaaaat 104  Q
    |||||| |||||||||||||| |||||||| | |||||||| ||||||||||||||||| ||||||||| ||||||||| |||||| |||||||||||||    
T  31733042 tttcagccccctctatctcaatgtttactctgttacaaagtctatatttatagtaaaagcatccctcat-aaattggaaccaaatcaggcccataaaaat 31733140  T
Q  105 acgttt 110  Q
    ||||||    
T  31733141 acgttt 31733146  T

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Target: chr2; HSP #4
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 7 - 92
Target Start/End: Original strand, 12342687 - 12342772
Alignment:
Q  7 tttcagtcccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaatctg 92  Q
    |||||| ||||||||||||||||||||||| ||||||| || |||||||||||||||||||| ||| | ||||||||||||||||||    
T  12342687 tttcagccccctctatctcaaggtttactctgatacaatgtgtatatttatagtaaaagtat-cctaaaaaaattggaacaaatctg 12342772  T

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Target: chr2; HSP #5
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 7 - 111
Target Start/End: Complemental strand, 22874120 - 22874017
Alignment:
Q  7 tttcagtcccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaatctggcccataaaaata 105  Q
    |||||| |||||||||||| |||||| ||| |||||||||  | ||||||||| ||||||| |||||||||||||| ||||||||||||||  |||||||    
T  22874120 tttcagccccctctatctccaggtttgctctgatacaaagcctgtatttatagcaaaagtaaccctcataaaattgaaacaaatctggccc--aaaaata 22874023  T
Q  106 cgtttc 111  Q
    ||||||    
T  22874022 cgtttc 22874017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 17 - 91
Target Start/End: Complemental strand, 40699278 - 40699203
Alignment:
Q  17 ctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaatct 91  Q
    |||| ||||||||||||||| ||| ||| || |||||||||||||||||||||||||| |||||||||||||||||    
T  40699278 ctctctctcaaggtttactctgatgcaaggtctatatttatagtaaaagtatccctcagaaaattggaacaaatct 40699203  T

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Target: chr2; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 7 - 88
Target Start/End: Complemental strand, 28196615 - 28196534
Alignment:
Q  7 tttcagtcccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaa 88  Q
    |||||| |||||||||||||| |||||||| |||||||||  ||||||||||||||||| ||||||||| |||||||||||||    
T  28196615 tttcagccccctctatctcaatgtttactctgatacaaagcatatatttatagtaaaagaatccctcat-aaattggaacaaa 28196534  T

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Target: chr2; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 14 - 88
Target Start/End: Complemental strand, 17848414 - 17848342
Alignment:
Q  14 cccctctatctcaaggtttactcgatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaa 88  Q
    |||||||||||||||| ||||| |||||||||  ||||||||||||||||| ||||||||| |||||||||||||    
T  17848414 cccctctatctcaaggattact-gatacaaagcctatatttatagtaaaagaatccctcat-aaattggaacaaa 17848342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 7 - 76
Target Start/End: Complemental strand, 19007618 - 19007548
Alignment:
Q  7 tttcagtcccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataa 76  Q
    |||||| ||||||||||||||||||||||  |||||||||  ||||||||||||||||| |||||||||||    
T  19007618 tttcagccccctctatctcaaggtttactatgatacaaagcctatatttatagtaaaagaatccctcataa 19007548  T

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Target: chr2; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 7 - 92
Target Start/End: Original strand, 40032335 - 40032420
Alignment:
Q  7 tttcagtcccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaatctg 92  Q
    |||||| |||||||||||||| |||||||| ||||||| || ||||||||||||||||||||| || | ||| ||||||||||||||    
T  40032335 tttcagccccctctatctcaaagtttactctgatacaaggtctatatttatagtaaaagtatcgctta-aaacttggaacaaatctg 40032420  T

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Target: chr2; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 7 - 110
Target Start/End: Original strand, 11578381 - 11578485
Alignment:
Q  7 tttcagtcccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagta-tccctcataaaattggaacaaatctggcccataaaaat 104  Q
    |||||| || |||||||||||| ||||| | |||| || || ||||||||||||||||| | ||||||| |||||||||||||||| ||||| |||||||    
T  11578381 tttcagcccactctatctcaagatttaccctgatataaggtctatatttatagtaaaagcaatccctca-aaaattggaacaaatcaggcccctaaaaat 11578479  T
Q  105 acgttt 110  Q
    ||||||    
T  11578480 acgttt 11578485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 22 - 89
Target Start/End: Original strand, 20147040 - 20147108
Alignment:
Q  22 tctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaat 89  Q
    ||||||||||||||  ||||||| || |||||||||||||||| ||| |||||||||||||||||||||    
T  20147040 tctcaaggtttactttgatacaaggtctatatttatagtaaaaatattcctcataaaattggaacaaat 20147108  T

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Target: chr2; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 48 - 110
Target Start/End: Original strand, 45239300 - 45239362
Alignment:
Q  48 tatatttatagtaaaagtatccctcataaaattggaac-aaatctggcccataaaaatacgttt 110  Q
    ||||||||||||||||| ||||||||| |||||||||| ||||| |||||||||||||||||||    
T  45239300 tatatttatagtaaaagcatccctcat-aaattggaactaaatcaggcccataaaaatacgttt 45239362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 7 - 91
Target Start/End: Original strand, 22163224 - 22163309
Alignment:
Q  7 tttcagtcccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaatct 91  Q
    |||||| |||||||||||||| |||||| | ||||||| || ||||||||||||||||| ||||   |||||| ||||||||||||    
T  22163224 tttcagccccctctatctcaaagtttacactgatacaatgtctatatttatagtaaaagaatcctcaataaaactggaacaaatct 22163309  T

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Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 17 - 92
Target Start/End: Complemental strand, 35107268 - 35107193
Alignment:
Q  17 ctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaatctg 92  Q
    ||||| |||||||||||||  ||||||| || |||||||||||||||||||||||| | ||| ||||||||||||||    
T  35107268 ctctacctcaaggtttactatgatacaatgtctatatttatagtaaaagtatccctta-aaatttggaacaaatctg 35107193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 7 - 89
Target Start/End: Complemental strand, 42452761 - 42452678
Alignment:
Q  7 tttcagtcccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaat 89  Q
    |||||| |||||||||||| | |||| ||| ||||||| || |||||||||| |||||||||  |||||||| |||||||||||    
T  42452761 tttcagccccctctatctccaagtttgctctgatacaatgtctatatttataataaaagtataactcataaatttggaacaaat 42452678  T

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Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 7 - 92
Target Start/End: Original strand, 6264422 - 6264507
Alignment:
Q  7 tttcagtcccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaatctg 92  Q
    |||||| |||||||||||||| ||||| || ||||||| || |||||||||||||||| |||| || | ||| ||||||||||||||    
T  6264422 tttcagccccctctatctcaaagtttagtctgatacaaggtctatatttatagtaaaaatatcgctta-aaatttggaacaaatctg 6264507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 14 - 91
Target Start/End: Original strand, 11739844 - 11739922
Alignment:
Q  14 cccctctatctcaaggtttactcga-tacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaatct 91  Q
    ||||||||||||||||||||| | | ||||| || ||||||||||||||||| ||||   |||||| ||||||||||||    
T  11739844 cccctctatctcaaggtttacactaatacaatgtctatatttatagtaaaagaatcctcaataaaactggaacaaatct 11739922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 13828612 - 13828720
Alignment:
Q  1 ccttgttttcagtcccctctatctcaaggtttactcg-atacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaatctggcccata 99  Q
    |||||||||||| ||||||| |||||||||||  ||  ||||||  | ||||||||||||||||| |||||| | |||||||||||||||||  | ||||    
T  13828612 ccttgttttcag-cccctctctctcaaggtttcatctcatacaacttctatatttatagtaaaagaatccct-aaaaaattggaacaaatctcacgcata 13828709  T
Q  100 aaaatacgttt 110  Q
    ||| |||||||    
T  13828710 aaagtacgttt 13828720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 7 - 92
Target Start/End: Original strand, 13910321 - 13910406
Alignment:
Q  7 tttcagtcccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaatctg 92  Q
    |||||| |||||||||||| | |||| ||| ||||||| || |||||||||||||||||| ||||| | ||| ||||||||||||||    
T  13910321 tttcagccccctctatctccaagtttgctctgatacaaggtctatatttatagtaaaagtttccctta-aaatttggaacaaatctg 13910406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 7 - 92
Target Start/End: Original strand, 19504622 - 19504707
Alignment:
Q  7 tttcagtcccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaatctg 92  Q
    |||||| |||||||||||| | |||| ||| ||||||| || |||||||||||||||||| ||||| | ||| ||||||||||||||    
T  19504622 tttcagccccctctatctccaagtttgctctgatacaaggtctatatttatagtaaaagtttccctta-aaatttggaacaaatctg 19504707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 7 - 92
Target Start/End: Complemental strand, 27104777 - 27104692
Alignment:
Q  7 tttcagtcccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaatctg 92  Q
    |||||| |||||||||||||| |||| ||| ||||||| || |||||||||||||||||| || || | ||| ||||||||||||||    
T  27104777 tttcagccccctctatctcaaagttttctctgatacaaggtctatatttatagtaaaagtttcgctta-aaatttggaacaaatctg 27104692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 37 - 91
Target Start/End: Complemental strand, 35028526 - 35028473
Alignment:
Q  37 gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaatct 91  Q
    ||||||| || |||||||||||||||||||||||| | |||||||||||||||||    
T  35028526 gatacaatgtctatatttatagtaaaagtatccct-aaaaaattggaacaaatct 35028473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 38 - 91
Target Start/End: Complemental strand, 33603870 - 33603818
Alignment:
Q  38 atacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaatct 91  Q
    |||||| ||||||||||||||||||||||||||| |  ||||||||||||||||    
T  33603870 atacaaggtttatatttatagtaaaagtatccct-aacaaattggaacaaatct 33603818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 7 - 77
Target Start/End: Original strand, 38414312 - 38414378
Alignment:
Q  7 tttcagtcccctctatctcaaggtttactcgatacaaagtttatatttatagtaaaagtatccctcataaa 77  Q
    |||||| |||||||||||||||||||||    |||||||  ||||||||||||||||| |||| |||||||    
T  38414312 tttcagccccctctatctcaaggtttac----tacaaagcctatatttatagtaaaagaatccttcataaa 38414378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 37 - 89
Target Start/End: Original strand, 23452549 - 23452601
Alignment:
Q  37 gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaat 89  Q
    ||||||| || ||||||||||||||||||||  |||||||| |||||||||||    
T  23452549 gatacaaggtctatatttatagtaaaagtataactcataaatttggaacaaat 23452601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 37 - 89
Target Start/End: Original strand, 35215904 - 35215956
Alignment:
Q  37 gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaat 89  Q
    ||||||| || ||||||||||||||||||||  |||||||| |||||||||||    
T  35215904 gatacaaggtctatatttatagtaaaagtataactcataaatttggaacaaat 35215956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 7 - 61
Target Start/End: Complemental strand, 3022141 - 3022086
Alignment:
Q  7 tttcagtcccctctatctcaaggtttactc-gatacaaagtttatatttatagtaa 61  Q
    |||||| | ||| ||||||||||||||||| |||||||||| ||||||||||||||    
T  3022141 tttcagcctcctatatctcaaggtttactctgatacaaagtctatatttatagtaa 3022086  T

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Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 37 - 91
Target Start/End: Original strand, 17897550 - 17897605
Alignment:
Q  37 gatacaaagtttatatttatagtaaaagtatccctc-ataaaattggaacaaatct 91  Q
    ||||||| || ||||||||||||||||||||||||| | |||| ||||||||||||    
T  17897550 gatacaaggtctatatttatagtaaaagtatccctcaaaaaaactggaacaaatct 17897605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 7 - 65
Target Start/End: Original strand, 24162489 - 24162548
Alignment:
Q  7 tttcagtcccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagt 65  Q
    |||||| |||||||||||||| |||| ||| ||||||| || ||||||||||||||||||    
T  24162489 tttcagccccctctatctcaaagtttgctctgatacaaggtctatatttatagtaaaagt 24162548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 37 - 92
Target Start/End: Original strand, 28462594 - 28462648
Alignment:
Q  37 gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaatctg 92  Q
    ||||||| |||||||||||||||||||||| |||| | ||| ||||||||||||||    
T  28462594 gatacaaggtttatatttatagtaaaagtaaccctta-aaatttggaacaaatctg 28462648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 14 - 91
Target Start/End: Original strand, 15539759 - 15539837
Alignment:
Q  14 cccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaatct 91  Q
    ||||| ||||||||||||||| | ||||||| || ||||||||||||||||  ||||   |||||| ||||||||||||    
T  15539759 cccctatatctcaaggtttacactgatacaatgtctatatttatagtaaaacaatcctcaataaaactggaacaaatct 15539837  T

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Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 220 - 258
Target Start/End: Original strand, 15539970 - 15540008
Alignment:
Q  220 aaatcggccaccgattttctgcttccagaatttcaattt 258  Q
    |||||||||| ||||||||||||||||||||| ||||||    
T  15539970 aaatcggccatcgattttctgcttccagaattccaattt 15540008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 37 - 79
Target Start/End: Original strand, 20146915 - 20146957
Alignment:
Q  37 gatacaaagtttatatttatagtaaaagtatccctcataaaat 79  Q
    ||||||| || |||||||||||||||| |||||||||||||||    
T  20146915 gatacaaggtctatatttatagtaaaaatatccctcataaaat 20146957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 220 - 258
Target Start/End: Original strand, 22163420 - 22163458
Alignment:
Q  220 aaatcggccaccgattttctgcttccagaatttcaattt 258  Q
    ||||||||||||||||||| |||||||||||| ||||||    
T  22163420 aaatcggccaccgattttcagcttccagaattccaattt 22163458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 15 - 92
Target Start/End: Complemental strand, 42064485 - 42064408
Alignment:
Q  15 ccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaatctg 92  Q
    ||||||||||| | |||| ||| ||||||| || ||||||||||||||||||||| || | ||| ||||||||||||||    
T  42064485 ccctctatctccaagtttgctctgatacaaggtctatatttatagtaaaagtatcgctta-aaatttggaacaaatctg 42064408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 7 - 91
Target Start/End: Original strand, 45280262 - 45280348
Alignment:
Q  7 tttcagtcccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagt-atccctcataaaattggaacaaatct 91  Q
    |||||| |||||||||||||| |||| ||| ||||||| || |||||||||||| ||||| |||||| | |||| || |||||||||    
T  45280262 tttcagccccctctatctcaaagtttgctctgatacaaggtatatatttatagtgaaagtaatcccttaaaaaactgaaacaaatct 45280348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 15 - 91
Target Start/End: Complemental strand, 14837243 - 14837166
Alignment:
Q  15 ccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaatct 91  Q
    |||||||||||||||||||| | ||||||| || |||||||| |||||||| ||||   |||||| |||| |||||||    
T  14837243 ccctctatctcaaggtttacactgatacaatgtctatatttacagtaaaagaatcctcaataaaactggagcaaatct 14837166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 11 - 91
Target Start/End: Original strand, 44289349 - 44289430
Alignment:
Q  11 agtcccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaatct 91  Q
    |||||||||||| ||||||||| ||  ||||||||   ||||||||||||||||| ||||   |||||| ||||||||||||    
T  44289349 agtcccctctatatcaaggtttgctatgatacaaaacctatatttatagtaaaagaatcctcaataaaactggaacaaatct 44289430  T

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Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 22 - 85
Target Start/End: Original strand, 42923803 - 42923867
Alignment:
Q  22 tctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaac 85  Q
    ||||||||||||||  ||| ||| || ||||||||||||||||||||  |||||||| |||||||    
T  42923803 tctcaaggtttactatgattcaaggtctatatttatagtaaaagtataactcataaatttggaac 42923867  T

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Target: chr7 (Bit Score: 72; Significance: 1e-32; HSPs: 54)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 20091812 - 20091903
Alignment:
Q  1 ccttgttttcagtcccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaatct 91  Q
    |||||||||||| ||||||||||||||||||||||| |||| ||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  20091812 ccttgttttcagccccctctatctcaaggtttactctgataaaaagtctatatttatagtaaaagtatccctcataaaattggaacaaatct 20091903  T

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Target: chr7; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 7 - 91
Target Start/End: Complemental strand, 7188555 - 7188470
Alignment:
Q  7 tttcagtcccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaatct 91  Q
    |||||| ||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  7188555 tttcagccccctctatctcaaggtttactctgatacaaagtctatatttatagtaaaagtatccctcataaaattggaacaaatct 7188470  T

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Target: chr7; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 7 - 91
Target Start/End: Original strand, 22828910 - 22828995
Alignment:
Q  7 tttcagtcccctctatctcaaggtttactcg-atacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaatct 91  Q
    |||||| |||||||||||||||||||||||| ||||||||  ||||||||||||||||||||||||||||||| ||||||||||||    
T  22828910 tttcagccccctctatctcaaggtttactcggatacaaagcctatatttatagtaaaagtatccctcataaaactggaacaaatct 22828995  T

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Target: chr7; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 14 - 110
Target Start/End: Original strand, 24817632 - 24817729
Alignment:
Q  14 cccctctatctcaaggtttac-tc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaatctggcccataaaaatacgttt 110  Q
    ||||||||||||||||||||| || ||||||| || |||||||||| |||| |||||||||||||||||| ||||||||||||| ||||||||||||||    
T  24817632 cccctctatctcaaggtttacatctgatacaaggtctatatttatattaaa-gtatccctcataaaattgtaacaaatctggccaataaaaatacgttt 24817729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 7 - 110
Target Start/End: Original strand, 4296212 - 4296317
Alignment:
Q  7 tttcagtcccctctatctcaaggtttactc-gatacaaa-gtttatatttatagtaaaagtatccctcataaaattgga-acaaatctggcccataaaaa 103  Q
    |||||| ||||||||||||||||||||| | |||||||| || ||||||||||||||||| ||||||||| ||||||||  |||||| ||||||||||||    
T  4296212 tttcagccccctctatctcaaggtttacactgatacaaatgtctatatttatagtaaaagcatccctcat-aaattggatccaaatcaggcccataaaaa 4296310  T
Q  104 tacgttt 110  Q
    |||||||    
T  4296311 tacgttt 4296317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 2 - 90
Target Start/End: Original strand, 30906322 - 30906411
Alignment:
Q  2 cttgttttcagtcccctctatctcaaggtttactcg-atacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaatc 90  Q
    ||||||||||| ||||||||||||||| |||||||  |||||| || ||||||||||| |||||||||| |||||||||||||| |||||    
T  30906322 cttgttttcagccccctctatctcaagatttactcttatacaaggtctatatttatagcaaaagtatccatcataaaattggaagaaatc 30906411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 6332243 - 6332153
Alignment:
Q  1 ccttgttttcagtcccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaatct 91  Q
    |||||||| ||| ||||||| |||||||||| |||| |||||||  |||||||||||||||||||||||||||| |||| ||||||||||||    
T  6332243 ccttgtttccagccccctctctctcaaggtt-actctgatacaagttttatatttatagtaaaagtatccctcaaaaaactggaacaaatct 6332153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 7 - 88
Target Start/End: Complemental strand, 11355270 - 11355189
Alignment:
Q  7 tttcagtcccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaa 88  Q
    |||||| ||||||||||||||||||||| | |||||||||  ||||||||||||||||| ||||||||| |||||||||||||    
T  11355270 tttcagccccctctatctcaaggtttacactgatacaaagcctatatttatagtaaaagaatccctcat-aaattggaacaaa 11355189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 7 - 88
Target Start/End: Original strand, 20137386 - 20137467
Alignment:
Q  7 tttcagtcccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaa 88  Q
    |||||| ||||||||||||||||||||||| |||||||||   |||||||||||||||| ||||||||| |||||||||||||    
T  20137386 tttcagccccctctatctcaaggtttactctgatacaaagccaatatttatagtaaaagaatccctcat-aaattggaacaaa 20137467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 15 - 85
Target Start/End: Complemental strand, 443599 - 443528
Alignment:
Q  15 ccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaac 85  Q
    |||||||||||||||||||||| ||| |||||| ||||||||||||||||||||  |||||||| |||||||    
T  443599 ccctctatctcaaggtttactctgattcaaagtctatatttatagtaaaagtataactcataaatttggaac 443528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 7 - 85
Target Start/End: Original strand, 42331276 - 42331355
Alignment:
Q  7 tttcagtcccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaac 85  Q
    |||||| |||||||||||||| ||||| || |||||||||| ||||||||||||||||||||  |||||||| |||||||    
T  42331276 tttcagccccctctatctcaaagtttagtctgatacaaagtctatatttatagtaaaagtataactcataaatttggaac 42331355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 7 - 92
Target Start/End: Original strand, 27306506 - 27306591
Alignment:
Q  7 tttcagtcccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaatctg 92  Q
    |||||| |||||||||||||| |||||||| ||||||| || ||||||||||||||||||||| || | ||| ||||||||||||||    
T  27306506 tttcagccccctctatctcaaagtttactctgatacaaggtctatatttatagtaaaagtatcgctta-aaatttggaacaaatctg 27306591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 22 - 106
Target Start/End: Complemental strand, 9680812 - 9680726
Alignment:
Q  22 tctcaaggtttac-tc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaac-aaatctggcccataaaaatac 106  Q
    ||||||||||||| || ||||||| || ||||||||||||||||| |||||||||||| ||||||| ||||| |||||||||||||||    
T  9680812 tctcaaggtttacatctgatacaaggtctatatttatagtaaaagcatccctcataaa-ttggaaccaaatcaggcccataaaaatac 9680726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 18 - 88
Target Start/End: Complemental strand, 42223157 - 42223087
Alignment:
Q  18 tctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaa 88  Q
    ||||||||||||||||||| |||||||||  ||||||||||||||||| | ||||||| |||||||||||||    
T  42223157 tctatctcaaggtttactctgatacaaagcctatatttatagtaaaagaaaccctcat-aaattggaacaaa 42223087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 7 - 92
Target Start/End: Complemental strand, 35641 - 35556
Alignment:
Q  7 tttcagtcccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaatctg 92  Q
    |||||| |||||||||||||| |||| ||| ||||||| || ||||||||||||||||||||| || | ||| ||||||||||||||    
T  35641 tttcagccccctctatctcaaagtttgctctgatacaaggtctatatttatagtaaaagtatcgctta-aaatttggaacaaatctg 35556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 7 - 68
Target Start/End: Complemental strand, 22392485 - 22392423
Alignment:
Q  7 tttcagtcccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatc 68  Q
    |||||| |||||||||||||| |||||||| ||||||| || |||||||||||||||||||||    
T  22392485 tttcagccccctctatctcaaagtttactctgatacaaggtctatatttatagtaaaagtatc 22392423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 7 - 91
Target Start/End: Original strand, 39146264 - 39146349
Alignment:
Q  7 tttcagtcccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaatct 91  Q
    |||||| |||||| |||||||||||||| | ||||||  || ||||||||||||||||| ||||   |||||||||||||||||||    
T  39146264 tttcagccccctccatctcaaggtttacactgatacagtgtctatatttatagtaaaagaatcctcaataaaattggaacaaatct 39146349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 37 - 89
Target Start/End: Original strand, 7351966 - 7352018
Alignment:
Q  37 gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaat 89  Q
    ||||||| |||||||||||||||||||||||  |||||||| |||||||||||    
T  7351966 gatacaaggtttatatttatagtaaaagtataactcataaatttggaacaaat 7352018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 14 - 85
Target Start/End: Original strand, 13099760 - 13099832
Alignment:
Q  14 cccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaac 85  Q
    ||||||||||||||||||||||  ||| ||| || ||||||||||||||||||||  |||||||| |||||||    
T  13099760 cccctctatctcaaggtttactttgattcaaggtctatatttatagtaaaagtataactcataaatttggaac 13099832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 55 - 110
Target Start/End: Complemental strand, 24465502 - 24465449
Alignment:
Q  55 atagtaaaagtatccctcataaaattggaacaaatctggcccataaaaatacgttt 110  Q
    ||||||||||||| ||||||||  ||||||||||||||||||||||||| ||||||    
T  24465502 atagtaaaagtattcctcataa--ttggaacaaatctggcccataaaaaaacgttt 24465449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 7 - 92
Target Start/End: Complemental strand, 26804581 - 26804500
Alignment:
Q  7 tttcagtcccctctatctcaaggtttactcgatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaatctg 92  Q
    |||||| |||||||||||||| ||||||||   |||| || ||||||||||||||||||||| || | ||| ||||||||||||||    
T  26804581 tttcagccccctctatctcaaagtttactc---acaaggtctatatttatagtaaaagtatcgctta-aaatttggaacaaatctg 26804500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 7 - 89
Target Start/End: Original strand, 31156188 - 31156271
Alignment:
Q  7 tttcagtcccctctatctcaaggtttac-tcgatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaat 89  Q
    |||||| |||||||||||||| |||| | | |||||||  | ||||||||||||||||||||  |||||||| |||||||||||    
T  31156188 tttcagccccctctatctcaaagtttgccttgatacaagctctatatttatagtaaaagtatagctcataaatttggaacaaat 31156271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 220 - 259
Target Start/End: Complemental strand, 44724395 - 44724356
Alignment:
Q  220 aaatcggccaccgattttctgcttccagaatttcaatttt 259  Q
    ||||||||||||||||||| ||||||||||||||||||||    
T  44724395 aaatcggccaccgattttcagcttccagaatttcaatttt 44724356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 7 - 68
Target Start/End: Complemental strand, 44576 - 44514
Alignment:
Q  7 tttcagtcccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatc 68  Q
    |||||| |||||||||||||| |||| ||| ||||||| || |||||||||||||||||||||    
T  44576 tttcagccccctctatctcaaagtttgctctgatacaaggtctatatttatagtaaaagtatc 44514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 38 - 103
Target Start/End: Complemental strand, 6048652 - 6048586
Alignment:
Q  38 atacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaatct-ggcccataaaaa 103  Q
    |||||| || ||||||||||||||||| |||||||| | ||||||||||||||| |||||| |||||    
T  6048652 atacaaggtctatatttatagtaaaagcatccctcaaataattggaacaaatctaggcccagaaaaa 6048586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 14 - 91
Target Start/End: Complemental strand, 25276146 - 25276068
Alignment:
Q  14 cccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaatct 91  Q
    |||||||||||||| |||| ||| |||||||||  ||||||||||||||||| ||||   |||||| ||||||||||||    
T  25276146 cccctctatctcaaagtttgctctgatacaaagcatatatttatagtaaaagaatcctcaataaaactggaacaaatct 25276068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 17 - 89
Target Start/End: Complemental strand, 1606472 - 1606399
Alignment:
Q  17 ctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaat 89  Q
    ||||||||||| |||| ||  ||||||| || ||||||||||||||||||||  |||||||| |||||||||||    
T  1606472 ctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtataactcataaatttggaacaaat 1606399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 7 - 91
Target Start/End: Complemental strand, 21678078 - 21677993
Alignment:
Q  7 tttcagtcccctctatctcaaggtttac-tcgatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaatct 91  Q
    |||||| ||||||||||||||||||||| | |||||||  | ||||||||||||||||| ||||   |||||| || |||||||||    
T  21678078 tttcagccccctctatctcaaggtttacattgatacaatatctatatttatagtaaaagaatcctcaataaaactgaaacaaatct 21677993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 7 - 91
Target Start/End: Complemental strand, 21680039 - 21679954
Alignment:
Q  7 tttcagtcccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaatct 91  Q
    |||||| ||||||||||||||||||||| |  |||||| || ||||||||||||||||| ||||   || ||| ||||||||||||    
T  21680039 tttcagccccctctatctcaaggtttacactaatacaatgtctatatttatagtaaaagaatcctcaattaaactggaacaaatct 21679954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 37 - 89
Target Start/End: Complemental strand, 3035698 - 3035646
Alignment:
Q  37 gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaat 89  Q
    ||||||| || ||||||||||||||||||||  |||||||| |||||||||||    
T  3035698 gatacaaggtctatatttatagtaaaagtataactcataaatttggaacaaat 3035646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 37 - 89
Target Start/End: Original strand, 7349587 - 7349639
Alignment:
Q  37 gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaat 89  Q
    ||||||| || ||||||||||||||||||||  |||||||| |||||||||||    
T  7349587 gatacaaggtctatatttatagtaaaagtataactcataaatttggaacaaat 7349639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 37 - 89
Target Start/End: Complemental strand, 11757205 - 11757153
Alignment:
Q  37 gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaat 89  Q
    ||||||| || ||||||||||||||||||||  |||||||| |||||||||||    
T  11757205 gatacaaggtctatatttatagtaaaagtataactcataaatttggaacaaat 11757153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 37 - 89
Target Start/End: Complemental strand, 18345518 - 18345466
Alignment:
Q  37 gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaat 89  Q
    ||||||| || ||||||||||||||||||||  |||||||| |||||||||||    
T  18345518 gatacaaggtctatatttatagtaaaagtataactcataaatttggaacaaat 18345466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 14 - 85
Target Start/End: Complemental strand, 21990156 - 21990084
Alignment:
Q  14 cccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaac 85  Q
    |||||||||||| |||||||||| ||| ||| || |||||||||||||||| |||  |||||||| |||||||    
T  21990156 cccctctatctccaggtttactctgattcaaggtctatatttatagtaaaattataactcataaatttggaac 21990084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 37 - 89
Target Start/End: Complemental strand, 28485543 - 28485491
Alignment:
Q  37 gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaat 89  Q
    ||||||| || ||||||||||||||||||||  |||||||| |||||||||||    
T  28485543 gatacaaggtctatatttatagtaaaagtataactcataaatttggaacaaat 28485491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 37 - 89
Target Start/End: Complemental strand, 38393963 - 38393911
Alignment:
Q  37 gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaat 89  Q
    ||||||| || ||||||||||||||||||||  |||||||| |||||||||||    
T  38393963 gatacaaggtctatatttatagtaaaagtataactcataaatttggaacaaat 38393911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 37 - 89
Target Start/End: Complemental strand, 38396267 - 38396215
Alignment:
Q  37 gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaat 89  Q
    ||||||| || ||||||||||||||||||||  |||||||| |||||||||||    
T  38396267 gatacaaggtctatatttatagtaaaagtataactcataaatttggaacaaat 38396215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 37 - 89
Target Start/End: Original strand, 43253832 - 43253884
Alignment:
Q  37 gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaat 89  Q
    ||||||| || ||||||||||||||||||||  |||||||| |||||||||||    
T  43253832 gatacaaggtctatatttatagtaaaagtataactcataaatttggaacaaat 43253884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 17 - 91
Target Start/End: Complemental strand, 6048799 - 6048725
Alignment:
Q  17 ctctatctcaaggtttac-tcgatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaatct 91  Q
    |||| ||||||||||||| || |||||| |||||| ||||||||||||| || ||| | |||||||||||||||||    
T  6048799 ctctctctcaaggtttacatctatacaaggtttatgtttatagtaaaagcat-ccttaaaaaattggaacaaatct 6048725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 6348837 - 6348778
Alignment:
Q  1 ccttgttttcagtcccctctatctcaaggtttac-tc-gatacaaagtttatatttatag 58  Q
    ||||||||||||||| ||||||||||| |||||| || ||||||| ||||||||||||||    
T  6348837 ccttgttttcagtcctctctatctcaatgtttacatctgatacaaggtttatatttatag 6348778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 7 - 65
Target Start/End: Original strand, 22251819 - 22251878
Alignment:
Q  7 tttcagtcccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagt 65  Q
    |||||| | |||||||||||| |||||||| ||| ||| |||||||||||||||||||||    
T  22251819 tttcagcctcctctatctcaaagtttactctgattcaaggtttatatttatagtaaaagt 22251878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 220 - 251
Target Start/End: Original strand, 27833128 - 27833159
Alignment:
Q  220 aaatcggccaccgattttctgcttccagaatt 251  Q
    ||||||||||||||||||||||||||||||||    
T  27833128 aaatcggccaccgattttctgcttccagaatt 27833159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 7 - 85
Target Start/End: Original strand, 37412405 - 37412484
Alignment:
Q  7 tttcagtcccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaac 85  Q
    |||||| ||||| |||||| |||||||||| ||| ||| || |||||||||||||||| |||  |||||||| |||||||    
T  37412405 tttcagccccctatatctccaggtttactctgattcaaggtctatatttatagtaaaaatataactcataaatttggaac 37412484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 7 - 92
Target Start/End: Original strand, 1049572 - 1049657
Alignment:
Q  7 tttcagtcccctctatctcaaggtttactcga-tacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaatctg 92  Q
    |||||| |||||||||||||| |||| ||| | ||||| || |||||||||||||||||| || || | ||| ||||||||||||||    
T  1049572 tttcagccccctctatctcaaagtttgctctaatacaaggtctatatttatagtaaaagtttcgctta-aaatttggaacaaatctg 1049657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 7 - 68
Target Start/End: Complemental strand, 18567625 - 18567563
Alignment:
Q  7 tttcagtcccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatc 68  Q
    |||||| ||| |||||||||| |||||||| |||||||  | |||||||||||||||||||||    
T  18567625 tttcagccccttctatctcaaagtttactctgatacaagatctatatttatagtaaaagtatc 18567563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 7 - 68
Target Start/End: Original strand, 31435324 - 31435386
Alignment:
Q  7 tttcagtcccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatc 68  Q
    |||||| ||| |||||||||| |||||||| |||||||  | |||||||||||||||||||||    
T  31435324 tttcagccccttctatctcaaagtttactctgatacaagatctatatttatagtaaaagtatc 31435386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 38 - 92
Target Start/End: Complemental strand, 45366526 - 45366473
Alignment:
Q  38 atacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaatctg 92  Q
    |||||| |||||||||||||||||||||| |||| | ||| ||||||||||||||    
T  45366526 atacaaggtttatatttatagtaaaagtaaccctta-aaatttggaacaaatctg 45366473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 48 - 89
Target Start/End: Complemental strand, 1849935 - 1849894
Alignment:
Q  48 tatatttatagtaaaagtatccctcataaaattggaacaaat 89  Q
    ||||||||||||||||||||  |||||||| |||||||||||    
T  1849935 tatatttatagtaaaagtataactcataaatttggaacaaat 1849894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 48 - 89
Target Start/End: Original strand, 21470614 - 21470655
Alignment:
Q  48 tatatttatagtaaaagtatccctcataaaattggaacaaat 89  Q
    ||||||||||||||||||||  |||||||| |||||||||||    
T  21470614 tatatttatagtaaaagtataactcataaatttggaacaaat 21470655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 13 - 91
Target Start/End: Complemental strand, 26210553 - 26210473
Alignment:
Q  13 tcccctctatctcaaggtttac--tcgatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaatct 91  Q
    ||||| || |||||||||||||  | |||||||  | |||||||||| |||||| |||||||| | |||||||||||||||    
T  26210553 tcccccctctctcaaggtttacatttgatacaagttctatatttatactaaaagcatccctcaaataattggaacaaatct 26210473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 7 - 91
Target Start/End: Complemental strand, 44724591 - 44724506
Alignment:
Q  7 tttcagtcccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaatct 91  Q
    |||||| ||||| |||||| |||||||| | ||||||| || ||||||||||||||||| ||||   |||||| | ||||||||||    
T  44724591 tttcagccccctatatctccaggtttacactgatacaatgtctatatttatagtaaaagaatcctcaataaaactagaacaaatct 44724506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 46 - 90
Target Start/End: Original strand, 6067509 - 6067552
Alignment:
Q  46 tttatatttatagtaaaagtatccctcataaaattggaacaaatc 90  Q
    ||||||||||||||||||| |||||| | ||||||||||||||||    
T  6067509 tttatatttatagtaaaagcatccct-aaaaaattggaacaaatc 6067552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 37 - 89
Target Start/End: Complemental strand, 20299435 - 20299383
Alignment:
Q  37 gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaat 89  Q
    ||||||| || ||||||||||||||||||||  ||||||||  ||||||||||    
T  20299435 gatacaaggtctatatttatagtaaaagtataactcataaatatggaacaaat 20299383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 14 - 65
Target Start/End: Complemental strand, 25542536 - 25542484
Alignment:
Q  14 cccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagt 65  Q
    |||||||||||||| |||| ||| ||||||| || ||||||||||||||||||    
T  25542536 cccctctatctcaaagtttgctctgatacaaggtctatatttatagtaaaagt 25542484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 70; Significance: 2e-31; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 7 - 91
Target Start/End: Original strand, 15185987 - 15186072
Alignment:
Q  7 tttcagtcccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaatct 91  Q
    |||||||| ||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15185987 tttcagtcacctttatctcaaggtttactctgatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaatct 15186072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 7 - 106
Target Start/End: Complemental strand, 27911073 - 27910973
Alignment:
Q  7 tttcagtcccctctatctcaaggtttac-tcgatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaatctggcccataaaaata 105  Q
    |||||| ||||||||||||||||||||| | ||||||| ||  |||||||| ||||||||||| | ||||||||||||||||||||||||||||||||||    
T  27911073 tttcagccccctctatctcaaggtttacattgatacaatgtcaatatttattgtaaaagtatctcccataaaattggaacaaatctggcccataaaaata 27910974  T
Q  106 c 106  Q
    |    
T  27910973 c 27910973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 7 - 106
Target Start/End: Complemental strand, 27957492 - 27957392
Alignment:
Q  7 tttcagtcccctctatctcaaggtttac-tcgatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaatctggcccataaaaata 105  Q
    |||||| ||||||||||||||||||||| | ||||||| ||  |||||||| ||||||||||| | ||||||||||||||||||||||||||||||||||    
T  27957492 tttcagccccctctatctcaaggtttacattgatacaatgtcaatatttattgtaaaagtatctcccataaaattggaacaaatctggcccataaaaata 27957393  T
Q  106 c 106  Q
    |    
T  27957392 c 27957392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 3 - 91
Target Start/End: Complemental strand, 31162275 - 31162186
Alignment:
Q  3 ttgttttcagtcccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaatct 91  Q
    ||||||| || ||||||| ||||||||||||||  ||||||| || ||||||||||||||||||||||||||||||||||||||||||||    
T  31162275 ttgtttttagccccctctttctcaaggtttactatgatacaaggtctatatttatagtaaaagtatccctcataaaattggaacaaatct 31162186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 14 - 88
Target Start/End: Original strand, 13858768 - 13858842
Alignment:
Q  14 cccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaa 88  Q
    ||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||| |||||||||||||    
T  13858768 cccctctatctcaaggtttactctgatacaaagtctatatttatagtaaaagtatccctcat-aaattggaacaaa 13858842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 7 - 89
Target Start/End: Complemental strand, 26775259 - 26775176
Alignment:
Q  7 tttcagtcccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaat 89  Q
    |||||| ||||||||||||||||||| ||| |||||||||  ||||||||||||||||||| |||||||||||||| |||||||    
T  26775259 tttcagccccctctatctcaaggtttgctctgatacaaagcctatatttatagtaaaagtaaccctcataaaattgtaacaaat 26775176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 7 - 110
Target Start/End: Original strand, 35872655 - 35872759
Alignment:
Q  7 tttcagtcccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaa-caaatctggcccataaaaat 104  Q
    |||||| ||||||||||||||||||||| | ||||||| || ||||||||||||||||| ||||||||| ||||||||| ||||||  ||||||||||||    
T  35872655 tttcagccccctctatctcaaggtttacactgatacaatgtctatatttatagtaaaagcatccctcat-aaattggaaccaaatcatgcccataaaaat 35872753  T
Q  105 acgttt 110  Q
    | ||||    
T  35872754 atgttt 35872759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 7 - 97
Target Start/End: Complemental strand, 1225224 - 1225133
Alignment:
Q  7 tttcagtcccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaatctggccca 97  Q
    |||||| ||||||||||||||||||||| | ||||||| |  ||||||||||||||||||| | | |||||||||| |||||||||||||||    
T  1225224 tttcagccccctctatctcaaggtttacactgatacaatgcctatatttatagtaaaagtaactcccataaaattgtaacaaatctggccca 1225133  T

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Target: chr8; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 22 - 104
Target Start/End: Complemental strand, 6376032 - 6375949
Alignment:
Q  22 tctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaatctggcccataaaaat 104  Q
    |||||| |||||||| ||||||| || ||||||||||||||||||||||| ||||||||||||| ||||||  |||||||||||    
T  6376032 tctcaatgtttactctgatacaaggtctatatttatagtaaaagtatcccgcataaaattggaataaatctaacccataaaaat 6375949  T

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Target: chr8; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 7 - 88
Target Start/End: Original strand, 14419468 - 14419549
Alignment:
Q  7 tttcagtcccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaa 88  Q
    |||||| ||||||||||||||||||||| | ||||||| || ||||||||||||||||||||| ||||| |||||||||||||    
T  14419468 tttcagccccctctatctcaaggtttacactgatacaatgtctatatttatagtaaaagtatcactcat-aaattggaacaaa 14419549  T

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Target: chr8; HSP #11
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 7 - 91
Target Start/End: Complemental strand, 25952579 - 25952494
Alignment:
Q  7 tttcagtcccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaatct 91  Q
    |||||| ||||||||||||||||||| ||| ||||||||| |||||||||||||||||| ||||   |||||| ||||||||||||    
T  25952579 tttcagccccctctatctcaaggtttcctctgatacaaagcttatatttatagtaaaagaatcctcaataaaactggaacaaatct 25952494  T

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Target: chr8; HSP #12
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 7 - 85
Target Start/End: Complemental strand, 181595 - 181516
Alignment:
Q  7 tttcagtcccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaac 85  Q
    |||||| |||||||||||||| ||||| || |||||||||| ||||||||||||||||||||  |||||||| |||||||    
T  181595 tttcagccccctctatctcaaagtttagtctgatacaaagtctatatttatagtaaaagtataactcataaatttggaac 181516  T

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Target: chr8; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 18 - 110
Target Start/End: Original strand, 30480791 - 30480884
Alignment:
Q  18 tctatctcaaggtttactcga-tacaaagtttatatttatagtaaaagtatccctcataaaattggaa-caaatctggcccataaaaatacgttt 110  Q
    ||||||||||||||||| | | ||||| || ||||||||||||||||| ||||||||| ||||||||| ||||||  ||||||||||||||||||    
T  30480791 tctatctcaaggtttacactaatacaatgtctatatttatagtaaaagcatccctcat-aaattggaaccaaatcaagcccataaaaatacgttt 30480884  T

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Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 7 - 89
Target Start/End: Original strand, 3886195 - 3886277
Alignment:
Q  7 tttcagtcccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaat 89  Q
    |||||| |||||||||||||| |||| ||| |||||||||| ||||||||||||||||||||| || | ||| |||||||||||    
T  3886195 tttcagccccctctatctcaaagtttgctctgatacaaagtctatatttatagtaaaagtatcgctta-aaatttggaacaaat 3886277  T

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Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 7 - 88
Target Start/End: Original strand, 5623015 - 5623096
Alignment:
Q  7 tttcagtcccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaa 88  Q
    |||||| |||||||||||||||||||| || ||||||||   ||||||||||||||||| ||| ||||| |||||||||||||    
T  5623015 tttcagccccctctatctcaaggtttattctgatacaaaacctatatttatagtaaaagaatcactcat-aaattggaacaaa 5623096  T

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Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 17 - 102
Target Start/End: Original strand, 14419784 - 14419870
Alignment:
Q  17 ctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaatctggcccataaaa 102  Q
    |||||||||||||||||| | ||||||| || ||||||||||| ||||||| | | |||||||||| | ||||||||||||| ||||    
T  14419784 ctctatctcaaggtttaccctgatacaatgtctatatttatagcaaaagtaactcccataaaattgtagcaaatctggcccaaaaaa 14419870  T

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Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 7 - 92
Target Start/End: Complemental strand, 14807809 - 14807724
Alignment:
Q  7 tttcagtcccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaatctg 92  Q
    |||||| |||||||||||||| |||| ||| ||||||| || ||||||||||||||||||||| || | ||| ||||||||||||||    
T  14807809 tttcagccccctctatctcaaagtttgctctgatacaaggtctatatttatagtaaaagtatcgctta-aaatttggaacaaatctg 14807724  T

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Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 7 - 91
Target Start/End: Original strand, 27107174 - 27107259
Alignment:
Q  7 tttcagtcccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaatct 91  Q
    |||||| ||||||||||||||||||||  | ||||||| || ||||||||||||||||| ||||   |||||| ||||||||||||    
T  27107174 tttcagccccctctatctcaaggtttatactgatacaatgtctatatttatagtaaaagaatcctcaataaaactggaacaaatct 27107259  T

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Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 7 - 110
Target Start/End: Complemental strand, 36865596 - 36865491
Alignment:
Q  7 tttcagtcccctctatctcaaggtttac-tc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaatctggcccataaaaat 104  Q
    |||||| ||||||||||| ||||||||| || ||||||| || ||||||||||||||||  |||  ||||||| | | ||||||||  ||||||||||||    
T  36865596 tttcagccccctctatcttaaggtttacatctgatacaatgtctatatttatagtaaaaacatctatcataaattggaaacaaatcaagcccataaaaat 36865497  T
Q  105 acgttt 110  Q
    ||||||    
T  36865496 acgttt 36865491  T

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Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 41382736 - 41382652
Alignment:
Q  1 ccttgttttcagtcccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaac 85  Q
    ||||||||| || ||| ||||||||||||||||||| ||| ||| || ||||||||||||||||||||  |||||||| |||||||    
T  41382736 ccttgtttt-agccccatctatctcaaggtttactctgattcaaggtctatatttatagtaaaagtataactcataaatttggaac 41382652  T

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Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 37 - 89
Target Start/End: Complemental strand, 3874033 - 3873981
Alignment:
Q  37 gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaat 89  Q
    |||||||||| ||||||||||||||||||||  |||||||| |||||||||||    
T  3874033 gatacaaagtctatatttatagtaaaagtataactcataaatttggaacaaat 3873981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 7 - 89
Target Start/End: Complemental strand, 15072768 - 15072686
Alignment:
Q  7 tttcagtcccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaat 89  Q
    |||||| |||||||||||||| ||||| || ||||||| || ||||||||||||||||||||| || | ||| |||||||||||    
T  15072768 tttcagccccctctatctcaaagtttagtctgatacaaggtctatatttatagtaaaagtatcgctta-aaatttggaacaaat 15072686  T

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Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 37 - 92
Target Start/End: Complemental strand, 17847555 - 17847501
Alignment:
Q  37 gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaatctg 92  Q
    ||||||| || |||||||||||||||||||||||||| ||| ||||||||||||||    
T  17847555 gatacaaggtctatatttatagtaaaagtatccctca-aaatttggaacaaatctg 17847501  T

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Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 7 - 69
Target Start/End: Complemental strand, 21482380 - 21482317
Alignment:
Q  7 tttcagtcccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatcc 69  Q
    ||||||||| ||||||||||| |||||||| |||||||| | ||||||||||||||||| ||||    
T  21482380 tttcagtccactctatctcaaagtttactctgatacaaattctatatttatagtaaaagaatcc 21482317  T

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Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 7 - 92
Target Start/End: Complemental strand, 4424076 - 4423991
Alignment:
Q  7 tttcagtcccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaatctg 92  Q
    |||||| |||||||||||||| |||| ||| ||||||| || | ||||||||||||||||||| || | ||| ||||||||||||||    
T  4424076 tttcagccccctctatctcaaagtttgctctgatacaaggtctgtatttatagtaaaagtatcgctta-aaatttggaacaaatctg 4423991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 14 - 91
Target Start/End: Complemental strand, 14477327 - 14477249
Alignment:
Q  14 cccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaatct 91  Q
    ||||||||||||||||||| ||| |||||||||  ||||||||||||||||| ||||   |||||| ||||| ||||||    
T  14477327 cccctctatctcaaggtttgctctgatacaaagcctatatttatagtaaaagaatcctcaataaaactggaataaatct 14477249  T

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Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 7 - 92
Target Start/End: Complemental strand, 15068039 - 15067954
Alignment:
Q  7 tttcagtcccctctatctcaaggtttac-tcgatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaatctg 92  Q
    |||||| ||| |||||||||| |||||  | ||||||| |||||||||||||||||||||||| || | ||| ||||||||||||||    
T  15068039 tttcagccccttctatctcaaagtttaggttgatacaaggtttatatttatagtaaaagtatcgctta-aaatttggaacaaatctg 15067954  T

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Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 7 - 91
Target Start/End: Original strand, 33541665 - 33541750
Alignment:
Q  7 tttcagtcccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaatct 91  Q
    |||||| |||||||||||||| |||||| | ||||||| || ||||||||||||||||| ||||   |||||| | ||||||||||    
T  33541665 tttcagccccctctatctcaatgtttacactgatacaatgtctatatttatagtaaaagaatcctcaataaaactcgaacaaatct 33541750  T

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Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 37 - 89
Target Start/End: Complemental strand, 15809242 - 15809190
Alignment:
Q  37 gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaat 89  Q
    ||||||| || ||||||||||||||||||||  |||||||| |||||||||||    
T  15809242 gatacaaggtctatatttatagtaaaagtataactcataaatttggaacaaat 15809190  T

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Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 37 - 89
Target Start/End: Original strand, 24873495 - 24873547
Alignment:
Q  37 gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaat 89  Q
    ||||||| || ||||||||||||||||||||  |||||||| |||||||||||    
T  24873495 gatacaaggtctatatttatagtaaaagtataactcataaatttggaacaaat 24873547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 17 - 92
Target Start/End: Original strand, 28251854 - 28251929
Alignment:
Q  17 ctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaatctg 92  Q
    ||||||||||| |||||||  ||||||| || ||||||||||||||||||||| || | ||| ||||||||||||||    
T  28251854 ctctatctcaaagtttactatgatacaaggtctatatttatagtaaaagtatcgctta-aaatttggaacaaatctg 28251929  T

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Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 37 - 89
Target Start/End: Original strand, 28283533 - 28283585
Alignment:
Q  37 gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaat 89  Q
    ||||||| || ||||||||||||||||||||  |||||||| |||||||||||    
T  28283533 gatacaaggtctatatttatagtaaaagtataactcataaatttggaacaaat 28283585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 37 - 89
Target Start/End: Complemental strand, 32339332 - 32339280
Alignment:
Q  37 gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaat 89  Q
    ||||||| || ||||||||||||||||||||  |||||||| |||||||||||    
T  32339332 gatacaaggtctatatttatagtaaaagtataactcataaatttggaacaaat 32339280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 15 - 68
Target Start/End: Original strand, 2468383 - 2468437
Alignment:
Q  15 ccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatc 68  Q
    ||||||||||||| |||||||  ||||||| || |||||||||||||||||||||    
T  2468383 ccctctatctcaaagtttactttgatacaaggtctatatttatagtaaaagtatc 2468437  T

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Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 220 - 258
Target Start/End: Complemental strand, 26775043 - 26775005
Alignment:
Q  220 aaatcggccaccgattttctgcttccagaatttcaattt 258  Q
    ||||||||||||||||||||||| |||||||| ||||||    
T  26775043 aaatcggccaccgattttctgctaccagaattccaattt 26775005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 7 - 92
Target Start/End: Complemental strand, 27827044 - 27826959
Alignment:
Q  7 tttcagtcccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaatctg 92  Q
    |||||| |||||||||||| | |||| ||| ||||||| |  ||||||||||||||||||||| || | ||| ||||||||||||||    
T  27827044 tttcagccccctctatctccaagtttgctctgatacaaggcctatatttatagtaaaagtatcgctta-aaatttggaacaaatctg 27826959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 7 - 92
Target Start/End: Complemental strand, 27829355 - 27829270
Alignment:
Q  7 tttcagtcccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaatctg 92  Q
    |||||| |||||||||||| | |||| ||| ||||||| |  ||||||||||||||||||||| || | ||| ||||||||||||||    
T  27829355 tttcagccccctctatctccaagtttgctctgatacaaggcctatatttatagtaaaagtatcgctta-aaatttggaacaaatctg 27829270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 220 - 258
Target Start/End: Original strand, 33541861 - 33541899
Alignment:
Q  220 aaatcggccaccgattttctgcttccagaatttcaattt 258  Q
    ||||||||||||||||||| |||||||||||| ||||||    
T  33541861 aaatcggccaccgattttcagcttccagaattccaattt 33541899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 14 - 85
Target Start/End: Complemental strand, 41384796 - 41384724
Alignment:
Q  14 cccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaac 85  Q
    ||||||||||||||  ||||||  ||| ||| || ||||||||||||||||||||  |||||||| |||||||    
T  41384796 cccctctatctcaatttttactttgattcaaggtctatatttatagtaaaagtataactcataaatttggaac 41384724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 37 - 89
Target Start/End: Complemental strand, 43530151 - 43530099
Alignment:
Q  37 gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaat 89  Q
    ||||||| || ||||||||||||||||||||  |||||||| |||||| ||||    
T  43530151 gatacaaggtctatatttatagtaaaagtataactcataaatttggaataaat 43530099  T

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Target: chr4 (Bit Score: 64; Significance: 9e-28; HSPs: 57)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 16186108 - 16186199
Alignment:
Q  1 ccttgttttcagtcccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaatct 91  Q
    ||||||||| || ||||||| ||||||||||||||| ||||||| |||||||||||||||||||||||||||| ||||||||||||||||||    
T  16186108 ccttgtttttagccccctctctctcaaggtttactctgatacaaggtttatatttatagtaaaagtatccctcctaaaattggaacaaatct 16186199  T

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Target: chr4; HSP #2
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 7 - 116
Target Start/End: Complemental strand, 36378348 - 36378240
Alignment:
Q  7 tttcagtcccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaatctggcccataaaaata 105  Q
    |||||| ||| |||||||||||||||| || |||||||||| ||||||||||||||||||| |||||||||||||| ||||||||||||||  |||||||    
T  36378348 tttcagccccgtctatctcaaggtttattctgatacaaagtctatatttatagtaaaagtaaccctcataaaattgtaacaaatctggccc--aaaaata 36378251  T
Q  106 cgtttcaaaaa 116  Q
    |||||| ||||    
T  36378250 cgtttctaaaa 36378240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 7 - 91
Target Start/End: Original strand, 15032813 - 15032898
Alignment:
Q  7 tttcagtcccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaatct 91  Q
    |||||| ||||| ||||||||||||||||| | ||| |||| ||||||||||||||||||||||||||||||||||||||||||||    
T  15032813 tttcagccccctttatctcaaggtttactctggtaccaagtctatatttatagtaaaagtatccctcataaaattggaacaaatct 15032898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 7 - 110
Target Start/End: Complemental strand, 19095938 - 19095834
Alignment:
Q  7 tttcagtcccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaac-aaatctggcccataaaaat 104  Q
    |||||| ||||||||||||||||||||| | ||||||| || ||||||||||||||||| |||||||||||| ||||||| ||||| |||||||||||||    
T  19095938 tttcagccccctctatctcaaggtttacactgatacaatgtctatatttatagtaaaagcatccctcataaa-ttggaaccaaatcaggcccataaaaat 19095840  T
Q  105 acgttt 110  Q
    ||||||    
T  19095839 acgttt 19095834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 20 - 97
Target Start/End: Complemental strand, 36380417 - 36380339
Alignment:
Q  20 tatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaatctggccca 97  Q
    ||||||||||||||||| ||||||||||  |||||||||||||||||| |||||||||||||| |||||||||||||||    
T  36380417 tatctcaaggtttactctgatacaaagtccatatttatagtaaaagtaaccctcataaaattgtaacaaatctggccca 36380339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 18537742 - 18537852
Alignment:
Q  1 ccttgttttcagtcccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaac-aaatctggcccat 98  Q
    |||||||||||| |||||||||||||| |||||||| |||||||  | ||||||||||||||||| ||| ||||| |||||||||| |||||  ||||||    
T  18537742 ccttgttttcagccccctctatctcaatgtttactctgatacaagatctatatttatagtaaaagcatcactcat-aaattggaacaaaatcatgcccat 18537840  T
Q  99 aaaaatacgttt 110  Q
    ||||||||||||    
T  18537841 aaaaatacgttt 18537852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 7 - 110
Target Start/End: Original strand, 24446856 - 24446960
Alignment:
Q  7 tttcagtcccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaa-caaatctggcccataaaaat 104  Q
    |||||| ||||||||||||||||||||| | ||||||| || ||||||||||||||||| ||||||||| ||||||||| ||||||  ||||||||||||    
T  24446856 tttcagccccctctatctcaaggtttacactgatacaatgtctatatttatagtaaaagcatccctcat-aaattggaaccaaatcatgcccataaaaat 24446954  T
Q  105 acgttt 110  Q
    | ||||    
T  24446955 atgttt 24446960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 17 - 92
Target Start/End: Complemental strand, 25357683 - 25357607
Alignment:
Q  17 ctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaatctg 92  Q
    |||| ||||||||||||||  ||||||| || ||||||||||||||||||||||||| |||||||||||||||||||    
T  25357683 ctctctctcaaggtttactttgatacaaggtctatatttatagtaaaagtatccctcgtaaaattggaacaaatctg 25357607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 199 - 261
Target Start/End: Original strand, 16186309 - 16186371
Alignment:
Q  199 aaatcgggccccggattccataaatcggccaccgattttctgcttccagaatttcaattttga 261  Q
    |||||||||||||  |||||||||| ||||||||||||||||||||||||||| |||||||||    
T  16186309 aaatcgggccccgatttccataaattggccaccgattttctgcttccagaattccaattttga 16186371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 7 - 88
Target Start/End: Original strand, 38928455 - 38928536
Alignment:
Q  7 tttcagtcccctctatctcaaggtttactcga-tacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaa 88  Q
    |||||| ||||||||||||||||||||||| | |||||||  ||||||||||||||||| ||||||||| |||||||||||||    
T  38928455 tttcagccccctctatctcaaggtttactctaatacaaagcctatatttatagtaaaagaatccctcat-aaattggaacaaa 38928536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 8756521 - 8756589
Alignment:
Q  1 ccttgttttcagtcccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatc 68  Q
    |||||||||||| ||| ||||||||||||||||||| ||||||| || |||||||||||||||||||||    
T  8756521 ccttgttttcagccccttctatctcaaggtttactctgatacaaggtctatatttatagtaaaagtatc 8756589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 7 - 110
Target Start/End: Original strand, 12396122 - 12396226
Alignment:
Q  7 tttcagtcccctctatctcaaggtttac-tcgatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaatctggcccataaaaata 105  Q
    |||||| ||| ||||||||||||||||| |  |||||| || ||||||||||||||||| |||||||||||| | | | |||||| ||| ||||||||||    
T  12396122 tttcagccccatctatctcaaggtttacatttatacaatgtctatatttatagtaaaagcatccctcataaactggaaccaaatcaggctcataaaaata 12396221  T
Q  106 cgttt 110  Q
    |||||    
T  12396222 cgttt 12396226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 7 - 110
Target Start/End: Original strand, 12401084 - 12401188
Alignment:
Q  7 tttcagtcccctctatctcaaggtttac-tcgatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaatctggcccataaaaata 105  Q
    |||||| ||| ||||||||||||||||| |  |||||| || ||||||||||||||||| |||||||||||| | | | |||||| ||| ||||||||||    
T  12401084 tttcagccccatctatctcaaggtttacatttatacaatgtctatatttatagtaaaagcatccctcataaactggaaccaaatcaggctcataaaaata 12401183  T
Q  106 cgttt 110  Q
    |||||    
T  12401184 cgttt 12401188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 7 - 85
Target Start/End: Complemental strand, 5101053 - 5100974
Alignment:
Q  7 tttcagtcccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaac 85  Q
    |||||||||||||||||||||||||||| | ||| ||| || ||||||||||||||||||||  |||||||| |||||||    
T  5101053 tttcagtcccctctatctcaaggtttaccctgattcaaggtctatatttatagtaaaagtataactcataaatttggaac 5100974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 2 - 103
Target Start/End: Original strand, 18535101 - 18535203
Alignment:
Q  2 cttgttttcagtcccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaac-aaatctggcccata 99  Q
    ||||||||||| ||||||||||||||||||||||| ||  | | || ||||||||| ||||||| ||||||||| |||||||||| ||||| ||||||||    
T  18535101 cttgttttcagccccctctatctcaaggtttactctgaatcgaggtctatatttattgtaaaagcatccctcat-aaattggaacaaaatcaggcccata 18535199  T
Q  100 aaaa 103  Q
    ||||    
T  18535200 aaaa 18535203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 7 - 92
Target Start/End: Original strand, 22803011 - 22803096
Alignment:
Q  7 tttcagtcccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaatctg 92  Q
    |||||| |||||||||||||| |||||||| ||||||| || ||||||||||||||||||||| || | ||| ||||||||||||||    
T  22803011 tttcagccccctctatctcaaagtttactctgatacaaggtctatatttatagtaaaagtatcgctta-aaatttggaacaaatctg 22803096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 7 - 88
Target Start/End: Original strand, 33415764 - 33415845
Alignment:
Q  7 tttcagtcccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaa 88  Q
    |||||| ||||||||||||||||||||||| |||||||||  ||||||| ||||||||  ||||||||| |||||||||||||    
T  33415764 tttcagccccctctatctcaaggtttactctgatacaaagcctatatttgtagtaaaaaaatccctcat-aaattggaacaaa 33415845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 7 - 92
Target Start/End: Complemental strand, 48486375 - 48486290
Alignment:
Q  7 tttcagtcccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaatctg 92  Q
    |||||| |||||||||||||| |||||||| ||||||| || ||||||||||||||||||||| || | ||| ||||||||||||||    
T  48486375 tttcagccccctctatctcaaagtttactctgatacaaggtctatatttatagtaaaagtatcgctta-aaatttggaacaaatctg 48486290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 17 - 110
Target Start/End: Original strand, 52043716 - 52043811
Alignment:
Q  17 ctctatctcaaggtttac-tc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaatct-ggcccataaaaatacgttt 110  Q
    |||| ||||||||||||| || ||||||| || ||||||||||||||||| |||||| | |||||||||||||||||  ||||||||||||||||||    
T  52043716 ctctctctcaaggtttacatctgatacaaggtctatatttatagtaaaagcatccct-aaaaaattggaacaaatctaagcccataaaaatacgttt 52043811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 7 - 68
Target Start/End: Original strand, 619724 - 619786
Alignment:
Q  7 tttcagtcccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatc 68  Q
    |||||| |||||||||||||| |||||||| ||||||| || |||||||||||||||||||||    
T  619724 tttcagccccctctatctcaaagtttactctgatacaaggtctatatttatagtaaaagtatc 619786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 7 - 92
Target Start/End: Complemental strand, 5198476 - 5198391
Alignment:
Q  7 tttcagtcccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaatctg 92  Q
    |||||| |||||||||||||| |||| ||| ||||||| || ||||||||||||||||||||| || | ||| ||||||||||||||    
T  5198476 tttcagccccctctatctcaaagtttgctctgatacaaggtctatatttatagtaaaagtatcgctta-aaatttggaacaaatctg 5198391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 7 - 68
Target Start/End: Original strand, 22801139 - 22801201
Alignment:
Q  7 tttcagtcccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatc 68  Q
    |||||| |||||||||||||| |||||||| ||||||| || |||||||||||||||||||||    
T  22801139 tttcagccccctctatctcaaagtttactctgatacaaggtctatatttatagtaaaagtatc 22801201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 7 - 92
Target Start/End: Complemental strand, 51015302 - 51015217
Alignment:
Q  7 tttcagtcccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaatctg 92  Q
    |||||| |||||||||||| | |||| ||| |||||||||| ||||||||||||||||||||| || | ||| ||||||||||||||    
T  51015302 tttcagccccctctatctccaagtttgctctgatacaaagtctatatttatagtaaaagtatcgctta-aaatttggaacaaatctg 51015217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 7 - 84
Target Start/End: Complemental strand, 56030500 - 56030422
Alignment:
Q  7 tttcagtcccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaa 84  Q
    |||||| ||| ||||||||||||||||||| |||||||||  |||||||||||||||| |||  |||||||| ||||||    
T  56030500 tttcagccccttctatctcaaggtttactctgatacaaagcctatatttatagtaaaaatataactcataaatttggaa 56030422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 7 - 111
Target Start/End: Complemental strand, 16453365 - 16453261
Alignment:
Q  7 tttcagtcccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaatctggcccataaaaata 105  Q
    |||||| ||||||||||||  ||||| ||| |||||||||  ||||||||||| ||||||| | | |||||||||| ||||||| ||||||| |||||||    
T  16453365 tttcagccccctctatctctcggtttgctctgatacaaagcctatatttatagcaaaagtaactcccataaaattgtaacaaatttggccca-aaaaata 16453267  T
Q  106 cgtttc 111  Q
     |||||    
T  16453266 tgtttc 16453261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 38 - 90
Target Start/End: Complemental strand, 26557614 - 26557563
Alignment:
Q  38 atacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaatc 90  Q
    |||||| ||||||||||||||||||| ||||||||| ||||||||||||||||    
T  26557614 atacaaggtttatatttatagtaaaattatccctca-aaaattggaacaaatc 26557563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 7 - 70
Target Start/End: Complemental strand, 41997548 - 41997484
Alignment:
Q  7 tttcagtcccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccc 70  Q
    |||||| ||||| ||||||||||||||||| |||||||||| ||||||||||||| ||| |||||    
T  41997548 tttcagccccctttatctcaaggtttactctgatacaaagtctatatttatagtagaagaatccc 41997484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 7 - 89
Target Start/End: Complemental strand, 24879045 - 24878963
Alignment:
Q  7 tttcagtcccctctatctcaaggtttactcg-atacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaat 89  Q
    |||||| |||||||||||| | ||||||||| |||||| || ||||||||||||||||||||| || | ||| |||||||||||    
T  24879045 tttcagccccctctatctccaagtttactcggatacaaggtctatatttatagtaaaagtatcgctta-aaatttggaacaaat 24878963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 14 - 92
Target Start/End: Complemental strand, 24880500 - 24880422
Alignment:
Q  14 cccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaatctg 92  Q
    |||||||||||| | |||||||| ||||||| || ||||||||||||||||||||| || | ||| ||||||||||||||    
T  24880500 cccctctatctccaagtttactccgatacaaggtctatatttatagtaaaagtatcgctta-aaatttggaacaaatctg 24880422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 7 - 89
Target Start/End: Original strand, 40091692 - 40091774
Alignment:
Q  7 tttcagtcccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaat 89  Q
    |||||| |||||||||||||| |||||||  ||||||| || ||||||||||||||||||||| || | ||| |||||||||||    
T  40091692 tttcagccccctctatctcaaagtttactttgatacaaggtctatatttatagtaaaagtatcgctta-aaatttggaacaaat 40091774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 220 - 262
Target Start/End: Original strand, 3937701 - 3937743
Alignment:
Q  220 aaatcggccaccgattttctgcttccagaatttcaattttgag 262  Q
    |||||||||||||||||||||||| ||||||| ||||||||||    
T  3937701 aaatcggccaccgattttctgctttcagaattccaattttgag 3937743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 37 - 91
Target Start/End: Complemental strand, 28453712 - 28453658
Alignment:
Q  37 gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaatct 91  Q
    ||||||| || |||||||||||||||| ||||||||| | |||||||||||||||    
T  28453712 gatacaaggtctatatttatagtaaaaatatccctcaaataattggaacaaatct 28453658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 18 - 91
Target Start/End: Original strand, 38270274 - 38270348
Alignment:
Q  18 tctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaatct 91  Q
    ||||||||||||||||| | ||||||| || ||||||||||||||||| ||||   |||||| ||||||||||||    
T  38270274 tctatctcaaggtttacactgatacaatgtctatatttatagtaaaagaatcctcaataaaactggaacaaatct 38270348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 220 - 258
Target Start/End: Original strand, 38270478 - 38270516
Alignment:
Q  220 aaatcggccaccgattttctgcttccagaatttcaattt 258  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  38270478 aaatcggccaccgattttctgctaccagaatttcaattt 38270516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 15 - 91
Target Start/End: Original strand, 3937494 - 3937570
Alignment:
Q  15 ccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaatct 91  Q
    |||||||||||||||||||||| |||| ||||| ||||||||||||||||| ||||   |||||| ||||| ||||||    
T  3937494 ccctctatctcaaggtttactctgata-aaagtctatatttatagtaaaagaatcctaaataaaactggaaaaaatct 3937570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 17 - 89
Target Start/End: Original strand, 22134917 - 22134990
Alignment:
Q  17 ctctatctcaaggttta-ctcgatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaat 89  Q
    |||| |||||| ||||| || ||||||| || ||||||||||||||||||||  |||||||| |||||||||||    
T  22134917 ctctctctcaaagtttagcttgatacaaggtctatatttatagtaaaagtataactcataaatttggaacaaat 22134990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 7 - 67
Target Start/End: Complemental strand, 47274783 - 47274722
Alignment:
Q  7 tttcagtcccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtat 67  Q
    |||||| |||||||||||||| ||||| || ||||||| || ||||||||||||||||||||    
T  47274783 tttcagccccctctatctcaaagtttagtctgatacaaggtctatatttatagtaaaagtat 47274722  T

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Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 37 - 89
Target Start/End: Original strand, 17662546 - 17662598
Alignment:
Q  37 gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaat 89  Q
    ||||||| || ||||||||||||||||||||  |||||||| |||||||||||    
T  17662546 gatacaaggtctatatttatagtaaaagtataactcataaatttggaacaaat 17662598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 37 - 89
Target Start/End: Original strand, 22132707 - 22132759
Alignment:
Q  37 gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaat 89  Q
    ||||||| || ||||||||||||||||||||  |||||||| |||||||||||    
T  22132707 gatacaaggtctatatttatagtaaaagtataactcataaatttggaacaaat 22132759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 37 - 89
Target Start/End: Complemental strand, 24348239 - 24348187
Alignment:
Q  37 gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaat 89  Q
    ||||||| || ||||||||||||||||||||  |||||||| |||||||||||    
T  24348239 gatacaaggtctatatttatagtaaaagtataactcataaatttggaacaaat 24348187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 37 - 89
Target Start/End: Original strand, 47211054 - 47211106
Alignment:
Q  37 gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaat 89  Q
    ||||||| || ||||||||||||||||||||  |||||||| |||||||||||    
T  47211054 gatacaaggtctatatttatagtaaaagtataactcataaatttggaacaaat 47211106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 37 - 89
Target Start/End: Complemental strand, 53405152 - 53405100
Alignment:
Q  37 gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaat 89  Q
    ||||||| || ||||||||||||||||||||  |||||||| |||||||||||    
T  53405152 gatacaaggtctatatttatagtaaaagtataactcataaatttggaacaaat 53405100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 38 - 89
Target Start/End: Original strand, 18709480 - 18709531
Alignment:
Q  38 atacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaat 89  Q
    |||||| || ||||||||||||||||||||  |||||||| |||||||||||    
T  18709480 atacaaggtctatatttatagtaaaagtataactcataaatttggaacaaat 18709531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 17 - 91
Target Start/End: Original strand, 40999234 - 40999308
Alignment:
Q  17 ctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaatct 91  Q
    ||||| |||||||||||||| |||| || ||||||||||||||||||| || |||| | ||| |||||||||||||    
T  40999234 ctctacctcaaggtttactctgatataaggtttatatttatagtaaaaataaccctta-aaatttggaacaaatct 40999308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 7 - 89
Target Start/End: Original strand, 44600115 - 44600198
Alignment:
Q  7 tttcagtcccctctatctcaaggtttactcga-tacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaat 89  Q
    |||||| |||||||||||||| |||| ||  | ||||| || ||||||||||||||||||||  |||||||| ||| |||||||    
T  44600115 tttcagccccctctatctcaaagtttgctttaatacaaggtctatatttatagtaaaagtataactcataaatttgaaacaaat 44600198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 220 - 251
Target Start/End: Complemental strand, 47564563 - 47564532
Alignment:
Q  220 aaatcggccaccgattttctgcttccagaatt 251  Q
    ||||||||||||||||||||||||||||||||    
T  47564563 aaatcggccaccgattttctgcttccagaatt 47564532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 7 - 91
Target Start/End: Complemental strand, 2891373 - 2891287
Alignment:
Q  7 tttcagtcccctctatctcaaggtttactc-gat-acaaagtttatatttatagtaaaagtatccctcataaaattggaacaaatct 91  Q
    |||||| ||||||||||| ||||||||| | ||| |||| || ||||||||||||||||| ||||   |||||| ||||||||||||    
T  2891373 tttcagccccctctatcttaaggtttacactgattacaatgtctatatttatagtaaaagaatcctcaataaaactggaacaaatct 2891287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 7 - 92
Target Start/End: Complemental strand, 11435011 - 11434926
Alignment:
Q  7 tttcagtcccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaatctg 92  Q
    |||||| |||||||||||| | |||| ||| ||||||| || |||||||||||||||||| || || | ||| ||||||||||||||    
T  11435011 tttcagccccctctatctccaagtttgctctgatacaaggtctatatttatagtaaaagtttcgctta-aaatttggaacaaatctg 11434926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 7 - 92
Target Start/End: Original strand, 22044667 - 22044752
Alignment:
Q  7 tttcagtcccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaatctg 92  Q
    |||||| |||||||||||| | |||| ||| ||||||| |  ||||||||||||||||||||| || | ||| ||||||||||||||    
T  22044667 tttcagccccctctatctccaagtttgctctgatacaaggcctatatttatagtaaaagtatcgctta-aaatttggaacaaatctg 22044752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 7 - 92
Target Start/End: Original strand, 22046962 - 22047047
Alignment:
Q  7 tttcagtcccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaatctg 92  Q
    |||||| |||||||||||| | |||| ||| ||||||| |  ||||||||||||||||||||| || | ||| ||||||||||||||    
T  22046962 tttcagccccctctatctccaagtttgctccgatacaaggcctatatttatagtaaaagtatcgctta-aaatttggaacaaatctg 22047047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 7 - 92
Target Start/End: Complemental strand, 24888852 - 24888767
Alignment:
Q  7 tttcagtcccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaatctg 92  Q
    |||||| |||||||||||| | |||| ||| ||||||| || ||||||||||||||||||||  || | ||| ||||||||||||||    
T  24888852 tttcagccccctctatctctaagtttgctctgatacaaggtctatatttatagtaaaagtattgctta-aaatttggaacaaatctg 24888767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 7 - 88
Target Start/End: Original strand, 37313343 - 37313423
Alignment:
Q  7 tttcagtcccctctatctcaaggtttac-tcgatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaa 88  Q
    |||||| ||||||||||||||||||||| | ||||||||   ||||||||||||||||  |||||||| ||||||| ||||||    
T  37313343 tttcagccccctctatctcaaggtttactttgatacaaaacctatatttatagtaaaa-aatccctca-aaaattgaaacaaa 37313423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 12102153 - 12102061
Alignment:
Q  1 ccttgttttcagtcccc-tctatctcaaggtttactc-gatacaaagtttatatttatagtaaaag-tatccctcataaaattggaacaaatct 91  Q
    |||||||||||| |||| |||||||||||||||  || |||||||  | |||||||||||||||||  |||||| | |||||||||||||||||    
T  12102153 ccttgttttcagcccccctctatctcaaggttttatctgatacaagatctatatttatagtaaaagaaatccct-aaaaaattggaacaaatct 12102061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 65
Target Start/End: Original strand, 16932068 - 16932125
Alignment:
Q  9 tcagtcccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagt 65  Q
    |||| |||||||||||||| |||| ||  ||||||| |||||||||||||||||||||    
T  16932068 tcagccccctctatctcaaagtttgctttgatacaaggtttatatttatagtaaaagt 16932125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 24 - 92
Target Start/End: Original strand, 36919881 - 36919949
Alignment:
Q  24 tcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaatctg 92  Q
    |||| |||||||| ||||||| || ||||||||||||||||||||| || | ||| ||||||||||||||    
T  36919881 tcaaagtttactctgatacaaggtctatatttatagtaaaagtatcgctta-aaatttggaacaaatctg 36919949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 16 - 91
Target Start/End: Complemental strand, 6132920 - 6132844
Alignment:
Q  16 cctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaatct 91  Q
    |||||||||||| |||||| | ||||||| || ||||||||||||||||| ||||   |||||| | ||||||||||    
T  6132920 cctctatctcaatgtttacaccgatacaatgtctatatttatagtaaaagaatcctcaataaaactagaacaaatct 6132844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 37 - 85
Target Start/End: Original strand, 14787741 - 14787789
Alignment:
Q  37 gatacaaagtttatatttatagtaaaagtatccctcataaaattggaac 85  Q
    ||||||| || ||||||||||||||||||||  |||||||| |||||||    
T  14787741 gatacaaggtctatatttatagtaaaagtataactcataaatttggaac 14787789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 64; Significance: 9e-28; HSPs: 68)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 17 - 91
Target Start/End: Complemental strand, 23633432 - 23633357
Alignment:
Q  17 ctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaatct 91  Q
    |||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  23633432 ctctatctcaaggtttactctgatacaaagtctatatttatagtaaaagtatccctcataaaattggaacaaatct 23633357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 13 - 86
Target Start/End: Complemental strand, 53597217 - 53597143
Alignment:
Q  13 tcccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaaca 86  Q
    |||||||||||||||||||||||| ||||||| || |||||||||||||||||||||||||||||||||||||||    
T  53597217 tcccctctatctcaaggtttactctgatacaaggtctatatttatagtaaaagtatccctcataaaattggaaca 53597143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 7 - 110
Target Start/End: Original strand, 880727 - 880831
Alignment:
Q  7 tttcagtcccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaa-caaatctggcccataaaaat 104  Q
    |||||| ||||||||||||||||||||| | ||||||| || ||||||||||||||||| ||||||||| ||||||||| |||||| |||||||||||||    
T  880727 tttcagacccctctatctcaaggtttacactgatacaatgtctatatttatagtaaaagcatccctcat-aaattggaaccaaatcaggcccataaaaat 880825  T
Q  105 acgttt 110  Q
    ||||||    
T  880826 acgttt 880831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 1618925 - 1619032
Alignment:
Q  1 ccttgttttcagtcccctctatctc--aaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaatctggccca 97  Q
    |||||||||||| ||||||| ||||  ||||||||||  | ||||| || |||||||||||| ||||||||||||||||||||||||||||||| |||||    
T  1618925 ccttgttttcagccccctctgtctctcaaggtttactatggtacaaggtctatatttatagtcaaagtatccctcataaaattggaacaaatctagccca 1619024  T
Q  98 taaaaata 105  Q
    ||||||||    
T  1619025 taaaaata 1619032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 47 - 106
Target Start/End: Original strand, 1620709 - 1620768
Alignment:
Q  47 ttatatttatagtaaaagtatccctcataaaattggaacaaatctggcccataaaaatac 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  1620709 ttatatttatagtaaaagtatccctcataaaattggaacaaatctagcccataaaaatac 1620768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 16 - 91
Target Start/End: Complemental strand, 23637000 - 23636924
Alignment:
Q  16 cctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaatct 91  Q
    ||||||||||||||||||||| |||||||||| |||||||||| ||||| ||||||||||||||||| |||||||||    
T  23637000 cctctatctcaaggtttactctgatacaaagtatatatttatattaaaattatccctcataaaattgaaacaaatct 23636924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 14 - 88
Target Start/End: Original strand, 28761710 - 28761784
Alignment:
Q  14 cccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaa 88  Q
    ||||||||||||||||||||||| ||| |||||| ||||||||||||||||||||||||||| |||||||||||||    
T  28761710 cccctctatctcaaggtttactctgatgcaaagtctatatttatagtaaaagtatccctcat-aaattggaacaaa 28761784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 48 - 107
Target Start/End: Complemental strand, 13419816 - 13419757
Alignment:
Q  48 tatatttatagtaaaagtatccctcataaaattggaacaaatctggcccataaaaatacg 107  Q
    ||||||||||||||||||||||||||||||||| ||||||||| || |||||||||||||    
T  13419816 tatatttatagtaaaagtatccctcataaaattagaacaaatccggtccataaaaatacg 13419757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 31151336 - 31151258
Alignment:
Q  1 ccttgttttcagtcccctctatctcaaggtttac-tc-gatacaaagtttatatttatagtaaaagtatccctcataaa 77  Q
    |||||||||||| |||||||||||| |||||||| || |||||||||| ||||||||||||||||| ||||||||||||    
T  31151336 ccttgttttcagccccctctatctcgaggtttacatctgatacaaagtctatatttatagtaaaagcatccctcataaa 31151258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 7 - 110
Target Start/End: Complemental strand, 6231431 - 6231327
Alignment:
Q  7 tttcagtcccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaac-aaatctggcccataaaaat 104  Q
    |||||| || |||||||||||| ||||| | ||||||| || ||||||||||||||||  |||||||||||| ||||||| ||||| |||||||||||||    
T  6231431 tttcagcccgctctatctcaagatttacactgatacaatgtctatatttatagtaaaatcatccctcataaa-ttggaaccaaatcaggcccataaaaat 6231333  T
Q  105 acgttt 110  Q
    ||||||    
T  6231332 acgttt 6231327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 37 - 90
Target Start/End: Complemental strand, 25635371 - 25635318
Alignment:
Q  37 gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaatc 90  Q
    |||||||||| ||||||||||||||||| |||||||||||||||||||||||||    
T  25635371 gatacaaagtctatatttatagtaaaagcatccctcataaaattggaacaaatc 25635318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 16 - 106
Target Start/End: Original strand, 890055 - 890146
Alignment:
Q  16 cctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaa-caaatctggcccataaaaatac 106  Q
    ||||||||||||||||||| | |||||||  | ||||||||||||||||| ||||||||| ||||||||| |||||| |||||||||||||||    
T  890055 cctctatctcaaggtttacactgatacaatatctatatttatagtaaaagcatccctcat-aaattggaaccaaatcaggcccataaaaatac 890146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 7 - 85
Target Start/End: Complemental strand, 1313392 - 1313313
Alignment:
Q  7 tttcagtcccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaac 85  Q
    |||||| ||||||||||||||||||||||| ||| ||| || ||||||||||||||||||||  |||||||| |||||||    
T  1313392 tttcagccccctctatctcaaggtttactctgattcaaggtctatatttatagtaaaagtataactcataaatttggaac 1313313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 38 - 96
Target Start/End: Original strand, 562069 - 562127
Alignment:
Q  38 atacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaatctggccc 96  Q
    ||||||||| |||||||||||||||| ||||||| |||||| |||||||||||||||||    
T  562069 atacaaagtctatatttatagtaaaattatcccttataaaaatggaacaaatctggccc 562127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 7 - 92
Target Start/End: Complemental strand, 1321423 - 1321338
Alignment:
Q  7 tttcagtcccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaatctg 92  Q
    |||||| |||||||||||||| |||| ||| |||||||||| ||||||||||||||||||||| || | ||| ||||||||||||||    
T  1321423 tttcagccccctctatctcaaagtttgctctgatacaaagtctatatttatagtaaaagtatcgctta-aaatttggaacaaatctg 1321338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 7 - 102
Target Start/End: Complemental strand, 3314666 - 3314570
Alignment:
Q  7 tttcagtcccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattgga-acaaatctggcccataaaa 102  Q
    |||||| ||||||||||||||||||||| | |||||||  | ||||||||||||||||| ||||||||| ||||||||  |||||| |||||||||||    
T  3314666 tttcagccccctctatctcaaggtttacactgatacaatatctatatttatagtaaaagcatccctcat-aaattggacccaaatcaggcccataaaa 3314570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 7 - 91
Target Start/End: Original strand, 4560540 - 4560625
Alignment:
Q  7 tttcagtcccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaatct 91  Q
    |||||| |||||||||||||| |||||||  |||||| ||| |||| ||||||| |||||||||||| ||||||||||| ||||||    
T  4560540 tttcagccccctctatctcaatgtttactatgatacatagtctatacttatagtgaaagtatccctcgtaaaattggaataaatct 4560625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 2 - 110
Target Start/End: Complemental strand, 24177266 - 24177159
Alignment:
Q  2 cttgttttcagtcccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaatctggcccataa 100  Q
    ||||||||||| |||||||| ||||| |||||||  ||||||| || |||||||||| ||||||||||||| | ||| ||||||||||||| || | |||    
T  24177266 cttgttttcagccccctctagctcaatgtttactatgatacaaggtctatatttataataaaagtatccctta-aaatttggaacaaatct-gcacttaa 24177169  T
Q  101 aaatacgttt 110  Q
    ||||||||||    
T  24177168 aaatacgttt 24177159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 7 - 91
Target Start/End: Original strand, 28137570 - 28137655
Alignment:
Q  7 tttcagtcccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaatct 91  Q
    |||||| ||||||||||||||||||||||| ||||||| |  ||||||||||||||||| ||||   |||||| ||||||||||||    
T  28137570 tttcagccccctctatctcaaggtttactctgatacaacgcatatatttatagtaaaagaatcctcaataaaactggaacaaatct 28137655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 7 - 110
Target Start/End: Original strand, 51675030 - 51675134
Alignment:
Q  7 tttcagtcccctctatctcaaggtttac-tcgatacaaagtttatatttatagtaaaagtatccctcataaaattggaa-caaatctggcccataaaaat 104  Q
    |||||| |||||||||||||| |||||| | ||||||| || ||||||||||||||||  ||||||||| ||||||||| |||||| | || ||||||||    
T  51675030 tttcagccccctctatctcaacgtttacattgatacaacgtctatatttatagtaaaaacatccctcat-aaattggaaccaaatcagacctataaaaat 51675128  T
Q  105 acgttt 110  Q
    ||||||    
T  51675129 acgttt 51675134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 7 - 110
Target Start/End: Complemental strand, 53591177 - 53591073
Alignment:
Q  7 tttcagtcccctctatctcaaggtttactcg-atacaaagtttatatttatagtaaaagtatccctcataaaattggaa-caaatctggcccataaaaat 104  Q
    |||||| | ||||||||||||||||||| |  |||||| || ||||||||||||||||| || |||||| |||| |||| |||||| |||||||||||||    
T  53591177 tttcagcctcctctatctcaaggtttacacttatacaatgtctatatttatagtaaaagcattcctcat-aaatcggaaccaaatcaggcccataaaaat 53591079  T
Q  105 acgttt 110  Q
    ||||||    
T  53591078 acgttt 53591073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 7 - 90
Target Start/End: Original strand, 28100316 - 28100400
Alignment:
Q  7 tttcagtcccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaatc 90  Q
    |||||| |||||||||||||||| |||||| ||||||| | |||||||||||||||||| ||||   |||||| |||||||||||    
T  28100316 tttcagccccctctatctcaagggttactctgatacaacgcttatatttatagtaaaagaatcctctataaaactggaacaaatc 28100400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 7 - 90
Target Start/End: Complemental strand, 28181006 - 28180922
Alignment:
Q  7 tttcagtcccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaatc 90  Q
    |||||| ||||||||||||||||||||| | ||||||| || ||||||||||||||||| ||||   |||||| |||||||||||    
T  28181006 tttcagccccctctatctcaaggtttacactgatacaatgtctatatttatagtaaaagaatcctcaataaaactggaacaaatc 28180922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 14 - 97
Target Start/End: Complemental strand, 39715445 - 39715361
Alignment:
Q  14 cccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaatctggccca 97  Q
    ||||||||||||||||||||| | ||||||| || ||||||||||| ||||||| | | ||| |||||| |||||||||||||||    
T  39715445 cccctctatctcaaggtttacactgatacaatgtctatatttatagcaaaagtaactcccatgaaattgtaacaaatctggccca 39715361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 7 - 85
Target Start/End: Original strand, 53915771 - 53915850
Alignment:
Q  7 tttcagtcccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaac 85  Q
    |||||| ||||||||||| ||||||||||| ||| ||| || ||||||||||||||||||||  |||||||| |||||||    
T  53915771 tttcagccccctctatcttaaggtttactctgattcaaggtctatatttatagtaaaagtataactcataaatttggaac 53915850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 14 - 88
Target Start/End: Original strand, 54691855 - 54691929
Alignment:
Q  14 cccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaa 88  Q
    ||||||||||| ||||||||||| |||||||||  ||||||||||||||||| |||| |||| |||||||||||||    
T  54691855 cccctctatcttaaggtttactctgatacaaagcctatatttatagtaaaagaatccttcat-aaattggaacaaa 54691929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 7 - 92
Target Start/End: Complemental strand, 15780842 - 15780757
Alignment:
Q  7 tttcagtcccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaatctg 92  Q
    |||||| |||||||||||| | |||||||| ||||||| || ||||||||||||||||||||| || | ||| ||||||||||||||    
T  15780842 tttcagccccctctatctccaagtttactctgatacaaggtctatatttatagtaaaagtatcgctta-aaatttggaacaaatctg 15780757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 7 - 91
Target Start/End: Original strand, 1626958 - 1627043
Alignment:
Q  7 tttcagtcccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaatct 91  Q
    |||||| ||||||||||||||||||||| | ||||||| || ||||||||||||||||| |||    |||||| ||||||||||||    
T  1626958 tttcagccccctctatctcaaggtttacactgatacaatgtctatatttatagtaaaagaatcatcaataaaactggaacaaatct 1627043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 7 - 90
Target Start/End: Original strand, 13420447 - 13420531
Alignment:
Q  7 tttcagtcccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaatc 90  Q
    |||||| | ||| ||||||||||||| ||  ||||||||   |||||||||||||||||||||| ||||||||||| ||||||||    
T  13420447 tttcagcctcctatatctcaaggtttgctttgatacaaaacctatatttatagtaaaagtatccttcataaaattgaaacaaatc 13420531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 7 - 90
Target Start/End: Original strand, 28102277 - 28102361
Alignment:
Q  7 tttcagtcccctctatctcaaggtttactcga-tacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaatc 90  Q
    |||||| |||||||||||||||| |||||| | ||||| | |||||||||||||||||| ||||   |||||| |||||||||||    
T  28102277 tttcagccccctctatctcaagggttactctaatacaacgcttatatttatagtaaaagaatcctctataaaactggaacaaatc 28102361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 7 - 97
Target Start/End: Complemental strand, 6484367 - 6484276
Alignment:
Q  7 tttcagtcccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaatctggccca 97  Q
    |||||| ||||||||||||||||||||| | ||||||| |  ||||||||||| ||||||| | | ||||||| || |||||||||| ||||    
T  6484367 tttcagccccctctatctcaaggtttacactgatacaatgcctatatttatagcaaaagtaactcccataaaaatgtaacaaatctgcccca 6484276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 37 - 87
Target Start/End: Original strand, 11007981 - 11008031
Alignment:
Q  37 gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaa 87  Q
    ||||||| ||||||||||||||||||||||| ||||| |||| ||||||||    
T  11007981 gatacaaggtttatatttatagtaaaagtattcctcaaaaaactggaacaa 11008031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 7 - 92
Target Start/End: Complemental strand, 11170386 - 11170301
Alignment:
Q  7 tttcagtcccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaatctg 92  Q
    |||||| |||||||||||||| |||| ||| ||||||| || |||||||||||||||||| || || | ||| ||||||||||||||    
T  11170386 tttcagccccctctatctcaaagtttgctctgatacaaggtctatatttatagtaaaagtttcgctta-aaatttggaacaaatctg 11170301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 7 - 92
Target Start/End: Complemental strand, 24979689 - 24979604
Alignment:
Q  7 tttcagtcccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaatctg 92  Q
    |||||| |||||||||||||| |||||||| ||||||| || |||||||||||| |||||||  || | ||| ||||||||||||||    
T  24979689 tttcagccccctctatctcaaagtttactctgatacaaggtatatatttatagtgaaagtattactta-aaatttggaacaaatctg 24979604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 37 - 91
Target Start/End: Complemental strand, 26762916 - 26762863
Alignment:
Q  37 gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaatct 91  Q
    ||||||| |||||||||||||||||||| |||||| | |||||||||||||||||    
T  26762916 gatacaaggtttatatttatagtaaaagcatccct-aaaaaattggaacaaatct 26762863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 7 - 111
Target Start/End: Original strand, 43423738 - 43423843
Alignment:
Q  7 tttcagtcccctctatctcaaggtttac-tcgatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaatct-ggcccataaaaat 104  Q
    |||||| ||||||| |||||||||||||   ||||||| || |||||||||||||||||  |||   |||||| |||||||||||| |||||| ||||||    
T  43423738 tttcagccccctctttctcaaggtttacagtgatacaatgtctatatttatagtaaaagagtcctcaataaaactggaacaaatctaggccca-aaaaat 43423836  T
Q  105 acgtttc 111  Q
    |||||||    
T  43423837 acgtttc 43423843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 7 - 92
Target Start/End: Original strand, 48361945 - 48362030
Alignment:
Q  7 tttcagtcccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaatctg 92  Q
    |||||| ||||| |||||||| |||||||  ||||||| || ||||||||||||||||||||| || | ||| ||||||||||||||    
T  48361945 tttcagccccctgtatctcaaagtttactatgatacaaggtctatatttatagtaaaagtatcgctta-aaatttggaacaaatctg 48362030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 7 - 102
Target Start/End: Complemental strand, 3306781 - 3306685
Alignment:
Q  7 tttcagtcccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaac-aaatctggcccataaaa 102  Q
    |||||| ||||| |||||| |||||||| | ||||||| || ||||||||||||||||  ||| |||||||| ||||||| ||||| |||||||||||    
T  3306781 tttcagccccctatatctctaggtttacactgatacaatgtctatatttatagtaaaaacatctctcataaa-ttggaaccaaatcaggcccataaaa 3306685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 7 - 91
Target Start/End: Original strand, 5927039 - 5927124
Alignment:
Q  7 tttcagtcccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaatct 91  Q
    |||||| || |||||||||||||||||| | ||||||| || ||||||||||||||||| |||    ||||| |||||||||||||    
T  5927039 tttcagccctctctatctcaaggtttacaccgatacaatgtctatatttatagtaaaagaatcttcaataaacttggaacaaatct 5927124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 7 - 91
Target Start/End: Complemental strand, 36011809 - 36011724
Alignment:
Q  7 tttcagtcccctctatctcaaggtttactcga-tacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaatct 91  Q
    |||||| ||||| ||||||||||||||| | | ||||| || ||||||||||||||||| ||||   |||||| ||||||||||||    
T  36011809 tttcagccccctttatctcaaggtttacactaatacaatgtctatatttatagtaaaagaatcctcaataaaactggaacaaatct 36011724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 7 - 91
Target Start/End: Original strand, 53468730 - 53468815
Alignment:
Q  7 tttcagtcccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaatct 91  Q
    |||||| ||||| ||||| ||||||||| | ||||||| || ||||||||||||||||| ||||   |||||| ||||||||||||    
T  53468730 tttcagccccctttatctaaaggtttacactgatacaatgtctatatttatagtaaaagaatcctcaataaaaatggaacaaatct 53468815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 37 - 89
Target Start/End: Complemental strand, 455854 - 455802
Alignment:
Q  37 gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaat 89  Q
    ||||||| || ||||||||||||||||||||  |||||||| |||||||||||    
T  455854 gatacaaggtctatatttatagtaaaagtataactcataaatttggaacaaat 455802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 37 - 89
Target Start/End: Complemental strand, 458231 - 458179
Alignment:
Q  37 gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaat 89  Q
    ||||||| || ||||||||||||||||||||  |||||||| |||||||||||    
T  458231 gatacaaggtctatatttatagtaaaagtataactcataaatttggaacaaat 458179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 37 - 89
Target Start/End: Complemental strand, 746702 - 746650
Alignment:
Q  37 gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaat 89  Q
    ||||||| || ||||||||||||||||||||  |||||||| |||||||||||    
T  746702 gatacaaggtctatatttatagtaaaagtataactcataaatttggaacaaat 746650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 37 - 89
Target Start/End: Original strand, 4104205 - 4104257
Alignment:
Q  37 gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaat 89  Q
    ||||||| || ||||||||||||||||||||  |||||||| |||||||||||    
T  4104205 gatacaaggtctatatttatagtaaaagtataactcataaatttggaacaaat 4104257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 7 - 58
Target Start/End: Complemental strand, 6561792 - 6561740
Alignment:
Q  7 tttcagtcccctctatctcaaggtttactc-gatacaaagtttatatttatag 58  Q
    |||||| ||||||||||||||||||||||| ||||||| || |||||||||||    
T  6561792 tttcagccccctctatctcaaggtttactctgatacaaggtctatatttatag 6561740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 37 - 89
Target Start/End: Original strand, 10621848 - 10621900
Alignment:
Q  37 gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaat 89  Q
    ||||||| || ||||||||||||||||||||  |||||||| |||||||||||    
T  10621848 gatacaaggtctatatttatagtaaaagtataactcataaatttggaacaaat 10621900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 15 - 92
Target Start/End: Complemental strand, 18162639 - 18162561
Alignment:
Q  15 ccctctatctcaaggtttactc--gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaatctg 92  Q
    ||||||||||| | ||||||||  ||||||| || ||||||||||||||||||||| || | ||| ||||||||||||||    
T  18162639 ccctctatctccaagtttactcatgatacaaggtctatatttatagtaaaagtatcgctta-aaatttggaacaaatctg 18162561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 37 - 89
Target Start/End: Complemental strand, 41849093 - 41849041
Alignment:
Q  37 gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaat 89  Q
    ||||||| || ||||||||||||||||||||  |||||||| |||||||||||    
T  41849093 gatacaatgtctatatttatagtaaaagtataactcataaatttggaacaaat 41849041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 37 - 89
Target Start/End: Complemental strand, 42990233 - 42990181
Alignment:
Q  37 gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaat 89  Q
    ||||||| || ||||||||||||||||||||  |||||||| |||||||||||    
T  42990233 gatacaaggtctatatttatagtaaaagtataactcataaatttggaacaaat 42990181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 48 - 91
Target Start/End: Complemental strand, 1673915 - 1673872
Alignment:
Q  48 tatatttatagtaaaagtatccctcataaaattggaacaaatct 91  Q
    |||||||||||||||||||||||||| |||| | ||||||||||    
T  1673915 tatatttatagtaaaagtatccctcaaaaaactagaacaaatct 1673872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 15 - 89
Target Start/End: Original strand, 12268249 - 12268323
Alignment:
Q  15 ccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaat 89  Q
    ||||||||||||| |||||||| |||||||  | ||||||||||||||||||||| || | ||| |||||||||||    
T  12268249 ccctctatctcaaagtttactctgatacaagttctatatttatagtaaaagtatcgctta-aaatttggaacaaat 12268323  T

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Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 37 - 92
Target Start/End: Original strand, 46966941 - 46966995
Alignment:
Q  37 gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaatctg 92  Q
    ||||||| |||||||||||||||||||||| |||| | ||| ||||||||||||||    
T  46966941 gatacaatgtttatatttatagtaaaagtaaccctta-aaatttggaacaaatctg 46966995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 37 - 110
Target Start/End: Original strand, 47149206 - 47149280
Alignment:
Q  37 gatacaaagtttatatttatagtaaaagta-tccctcataaaattggaa-caaatctggcccataaaaatacgttt 110  Q
    ||||||| || ||||||||||||||||| | |||||||| ||||||||| ||||||  ||||||||||||||||||    
T  47149206 gatacaaggtctatatttatagtaaaagcaatccctcat-aaattggaaccaaatcaagcccataaaaatacgttt 47149280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 7 - 69
Target Start/End: Original strand, 47701870 - 47701933
Alignment:
Q  7 tttcagtcccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatcc 69  Q
    |||||| ||||| ||||||||||||||| | ||||||| || ||||||||||||||||| ||||    
T  47701870 tttcagccccctttatctcaaggtttacactgatacaatgtctatatttatagtaaaagaatcc 47701933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 15 - 85
Target Start/End: Complemental strand, 51943345 - 51943274
Alignment:
Q  15 ccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaac 85  Q
    ||||||||||| |||||||||| ||| ||| || ||||||||||||||||||||   ||||||| |||||||    
T  51943345 ccctctatctccaggtttactctgattcaaggtctatatttatagtaaaagtataaatcataaatttggaac 51943274  T

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Target: chr3; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 7 - 77
Target Start/End: Original strand, 53917939 - 53918010
Alignment:
Q  7 tttcagtcccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaa 77  Q
    |||||| |||||| ||||||||||||| || ||| ||| || ||||||||||||||||||||  ||||||||    
T  53917939 tttcagccccctccatctcaaggtttaatctgattcaaggtctatatttatagtaaaagtataactcataaa 53918010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 15 - 89
Target Start/End: Complemental strand, 54884131 - 54884056
Alignment:
Q  15 ccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaat 89  Q
    ||||||||||||||||||||   ||| ||| |||||||||||| ||||||| ||||   |||||||||||||||||    
T  54884131 ccctctatctcaaggtttacaatgatccaatgtttatatttatggtaaaagaatcctcaataaaattggaacaaat 54884056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 220 - 258
Target Start/End: Original strand, 1627175 - 1627213
Alignment:
Q  220 aaatcggccaccgattttctgcttccagaatttcaattt 258  Q
    ||||||||||||||||||| |||||||||||| ||||||    
T  1627175 aaatcggccaccgattttcagcttccagaattccaattt 1627213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 7 - 91
Target Start/End: Original strand, 4308556 - 4308642
Alignment:
Q  7 tttcagtcccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagt-atccctcataaaattggaacaaatct 91  Q
    |||||| |||||||||||||| |||| ||| ||||||| || |||||||||||| ||||| |||||| | |||| || |||||||||    
T  4308556 tttcagccccctctatctcaaagtttgctctgatacaaggtctatatttatagtgaaagtaatcccttaaaaaactgaaacaaatct 4308642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 7 - 92
Target Start/End: Complemental strand, 5191635 - 5191550
Alignment:
Q  7 tttcagtcccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaatctg 92  Q
    |||||| |||||||||||| | |||| ||  ||||||| || |||||||||||||||||| ||||| | ||| ||||||||||||||    
T  5191635 tttcagccccctctatctccaagtttgcttagatacaaggtctatatttatagtaaaagtttccctta-aaatttggaacaaatctg 5191550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 7 - 92
Target Start/End: Complemental strand, 11163132 - 11163047
Alignment:
Q  7 tttcagtcccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaatctg 92  Q
    |||||| |||||||||||||| |||| ||| ||||||| || ||||||||| |||||||| || || | ||| ||||||||||||||    
T  11163132 tttcagccccctctatctcaaagtttgctctgatacaaggtctatatttatcgtaaaagtttcgctta-aaatttggaacaaatctg 11163047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 7 - 92
Target Start/End: Complemental strand, 26720530 - 26720445
Alignment:
Q  7 tttcagtcccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaatctg 92  Q
    |||||| |||||||||||| | |||| ||| ||||||| || ||||||||||||||||||||  || | ||| ||||||||||||||    
T  26720530 tttcagccccctctatctccaagtttgctctgatacaaggtctatatttatagtaaaagtattgctta-aaatttggaacaaatctg 26720445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 220 - 258
Target Start/End: Original strand, 28137766 - 28137804
Alignment:
Q  220 aaatcggccaccgattttctgcttccagaatttcaattt 258  Q
    |||||||||||||||||||| ||||||||||| ||||||    
T  28137766 aaatcggccaccgattttctacttccagaattccaattt 28137804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 7 - 68
Target Start/End: Complemental strand, 45882921 - 45882859
Alignment:
Q  7 tttcagtcccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatc 68  Q
    |||||| |||||||||||||  |||||||  ||||||| || |||||||||||||||||||||    
T  45882921 tttcagccccctctatctcatagtttactatgatacaaggtctatatttatagtaaaagtatc 45882859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 45 - 110
Target Start/End: Complemental strand, 27420587 - 27420523
Alignment:
Q  45 gtttatatttatagtaaaagtatccctcataaaattggaacaaatctggcccataaaaatacgttt 110  Q
    |||| ||||||| |||||||||||||| | ||||||||||||||||    ||||||||||||||||    
T  27420587 gtttgtatttattgtaaaagtatccct-aaaaaattggaacaaatccaagccataaaaatacgttt 27420523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 17 - 91
Target Start/End: Original strand, 31021431 - 31021507
Alignment:
Q  17 ctctatctcaaggtttac--tcgatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaatct 91  Q
    |||| |||||||||||||  | ||||||| || ||||||||||||||||  ||| |||| | |||||||||||||||    
T  31021431 ctctctctcaaggtttacatttgatacaaggtctatatttatagtaaaaccatctctcaaataattggaacaaatct 31021507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 37 - 89
Target Start/End: Complemental strand, 25533385 - 25533333
Alignment:
Q  37 gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaat 89  Q
    ||||||| || ||||||||||||||||||||  |||||||| || ||||||||    
T  25533385 gatacaaggtctatatttatagtaaaagtataactcataaatttagaacaaat 25533333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0224 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0224
Description:

Target: scaffold0224; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 14 - 91
Target Start/End: Original strand, 16102 - 16180
Alignment:
Q  14 cccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaatct 91  Q
    ||||||||||| ||||||||||| |||||||| | |||||||||||||||||||||||||||||| |||||||||||||    
T  16102 cccctctatcttaaggtttactctgatacaaaatctatatttatagtaaaagtatccctcataaatttggaacaaatct 16180  T

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Target: chr6 (Bit Score: 53; Significance: 3e-21; HSPs: 42)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 38 - 110
Target Start/End: Complemental strand, 15719652 - 15719580
Alignment:
Q  38 atacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaatctggcccataaaaatacgttt 110  Q
    |||||| || ||||||||||||||||||| |||||||||||||||||||||| ||||| ||||||||||||||    
T  15719652 atacaatgtatatatttatagtaaaagtaaccctcataaaattggaacaaatatggcctataaaaatacgttt 15719580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 7 - 110
Target Start/End: Complemental strand, 3390416 - 3390312
Alignment:
Q  7 tttcagtcccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaac-aaatctggcccataaaaat 104  Q
    |||||| ||| ||||||||||||||||  | ||||||| || ||||||||||||||||||||| |||||||| ||||||| ||||| |||||||||||||    
T  3390416 tttcagccccgtctatctcaaggtttatactgatacaatgtctatatttatagtaaaagtatctctcataaa-ttggaaccaaatcaggcccataaaaat 3390318  T
Q  105 acgttt 110  Q
    ||||||    
T  3390317 acgttt 3390312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 8 - 88
Target Start/End: Complemental strand, 15346427 - 15346347
Alignment:
Q  8 ttcagtcccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaa 88  Q
    ||||| ||||||||||||||||||||| | ||||||| || ||||||||||||||||||||||||||| |||||||||||||    
T  15346427 ttcagccccctctatctcaaggtttacactgatacaatgtctatatttatagtaaaagtatccctcat-aaattggaacaaa 15346347  T

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Target: chr6; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 7 - 85
Target Start/End: Complemental strand, 17852579 - 17852500
Alignment:
Q  7 tttcagtcccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaac 85  Q
    |||||| ||||||||||||||||||||||| ||| |||||| ||||||||||||||||||||  |||||||| |||||||    
T  17852579 tttcagccccctctatctcaaggtttactctgattcaaagtctatatttatagtaaaagtataactcataaatttggaac 17852500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 7 - 91
Target Start/End: Complemental strand, 13057231 - 13057146
Alignment:
Q  7 tttcagtcccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaatct 91  Q
    |||||| ||||||||||||||||||||| | ||||||| || ||||||||||||||||| ||||   |||||||||||||||||||    
T  13057231 tttcagccccctctatctcaaggtttacactgatacaatgtctatatttatagtaaaagaatcctcaataaaattggaacaaatct 13057146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 22 - 105
Target Start/End: Complemental strand, 11138325 - 11138241
Alignment:
Q  22 tctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaatctggcccataaaaata 105  Q
    |||| |||||||||| |||||||  ||||||| ||||||||||||||||| ||||||||| |||||||||  |||||||||||||    
T  11138325 tctccaggtttactctgatacaagatttatatctatagtaaaagtatcccgcataaaattagaacaaatccagcccataaaaata 11138241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 37 - 89
Target Start/End: Original strand, 28038013 - 28038065
Alignment:
Q  37 gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaat 89  Q
    ||||||| || ||||||||||||||||||||||||||||||||||||||||||    
T  28038013 gatacaatgtctatatttatagtaaaagtatccctcataaaattggaacaaat 28038065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 15 - 91
Target Start/End: Complemental strand, 10584155 - 10584078
Alignment:
Q  15 ccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaatct 91  Q
    |||||||||||||||||||| | ||||||| |||||||||||||||||||| ||||   |||||| ||||||||||||    
T  10584155 ccctctatctcaaggtttacactgatacaatgtttatatttatagtaaaagaatcctcaataaaactggaacaaatct 10584078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 26945192 - 26945089
Alignment:
Q  1 ccttgttttcagtcccctctatctcaaggtttactc--gatacaaagtttatatttatagtaaaagtatccctcataaaattggaac-aaatctggccca 97  Q
    |||||||||| | ||||| ||||||||||||||  |  ||||||| |||||||||||||||||||| || |||||| |||||||||| ||||| ||||||    
T  26945192 ccttgttttcggccccctatatctcaaggtttatacctgatacaaggtttatatttatagtaaaagcattcctcat-aaattggaacaaaatcaggccca 26945094  T
Q  98 taaaa 102  Q
    |||||    
T  26945093 taaaa 26945089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 7 - 111
Target Start/End: Original strand, 3630141 - 3630245
Alignment:
Q  7 tttcagtcccctctatctcaaggtttac-tcgatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaatct-ggcccataaaaat 104  Q
    |||||| ||||||||||||||| ||||| | ||||||| || ||||||||||||||||| ||||   |||||| |||||||||||| |||||  ||||||    
T  3630141 tttcagccccctctatctcaagttttacattgatacaatgtctatatttatagtaaaagaatcctcaataaaactggaacaaatctaggccc--aaaaat 3630238  T
Q  105 acgtttc 111  Q
    |||||||    
T  3630239 acgtttc 3630245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 7 - 89
Target Start/End: Original strand, 12195792 - 12195875
Alignment:
Q  7 tttcagtcccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaat 89  Q
    |||||| |||||||||||||| |||| ||  ||||||| || ||||||||||||||||||||  |||||||| |||||||||||    
T  12195792 tttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtataactcataaatttggaacaaat 12195875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 7 - 69
Target Start/End: Original strand, 32447593 - 32447656
Alignment:
Q  7 tttcagtcccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatcc 69  Q
    |||||| ||||||||||||||||||||||| |||||||||  ||||||||||||||||| ||||    
T  32447593 tttcagccccctctatctcaaggtttactctgatacaaagcctatatttatagtaaaagaatcc 32447656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 12186339 - 12186431
Alignment:
Q  1 ccttgttttcagtcccctctatctcaaggtttac--tcgatacaaagtttatatttatagtaaaagt-atccctcataaaattggaacaaatct 91  Q
    |||||||||||| ||| |||||||||||||||||    ||||||| ||||||||||||||||||||| ||| || | |||||||||||||||||    
T  12186339 ccttgttttcagccccttctatctcaaggtttacatgtgatacaaggtttatatttatagtaaaagtaatcgct-aaaaaattggaacaaatct 12186431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 7 - 92
Target Start/End: Original strand, 30729105 - 30729190
Alignment:
Q  7 tttcagtcccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaatctg 92  Q
    |||||| ||||||||||||||||||||||| |||||||  | ||||||||||||||||||| | || | ||| ||||||||||||||    
T  30729105 tttcagccccctctatctcaaggtttactctgatacaagatctatatttatagtaaaagtaccgctta-aaatttggaacaaatctg 30729190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 19696486 - 19696375
Alignment:
Q  1 ccttgttttcagtcc--cctctatctcaaggtttactcg-atacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaatctggccca 97  Q
    |||||||||||| ||  ||||| |||||||||||  ||  |||||| || ||||||||||||||||| |||| ||| |||||||||||||||||  | ||    
T  19696486 ccttgttttcagccctccctctctctcaaggtttcatcatatacaaggtctatatttatagtaaaagaatccttca-aaaattggaacaaatctcacgca 19696388  T
Q  98 taaaaatacgttt 110  Q
    |||||||||||||    
T  19696387 taaaaatacgttt 19696375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 7 - 91
Target Start/End: Original strand, 24338725 - 24338810
Alignment:
Q  7 tttcagtcccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaatct 91  Q
    |||||| ||||||||||||||||||||| | ||||||| || ||||||||||||||||| |||    |||||| ||||||||||||    
T  24338725 tttcagccccctctatctcaaggtttacactgatacaatgtctatatttatagtaaaagaatcttcaataaaactggaacaaatct 24338810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 7 - 91
Target Start/End: Complemental strand, 25477311 - 25477226
Alignment:
Q  7 tttcagtcccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaatct 91  Q
    |||||| ||||||||||||||||||||| | ||||||| || |||||||| |||||||| ||||   |||||| ||||||||||||    
T  25477311 tttcagccccctctatctcaaggtttacactgatacaatgtctatatttacagtaaaagaatcctcaataaaactggaacaaatct 25477226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 363 - 426
Target Start/End: Complemental strand, 1310736 - 1310672
Alignment:
Q  363 aattaggatttcgtgaacatggctgttttgaa-tcctacaaaaaagtgttgagacttggatttag 426  Q
    ||||||||||  |||||||||| ||||||||| ||||||||| ||||||||||||||||| ||||    
T  1310736 aattaggattgggtgaacatggttgttttgaaatcctacaaataagtgttgagacttggaattag 1310672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 37 - 88
Target Start/End: Complemental strand, 15367042 - 15366992
Alignment:
Q  37 gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaa 88  Q
    ||||||| || ||||||||||||||||||||||||||| |||||||||||||    
T  15367042 gatacaatgtctatatttatagtaaaagtatccctcat-aaattggaacaaa 15366992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 22 - 92
Target Start/End: Original strand, 16455716 - 16455786
Alignment:
Q  22 tctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaatctg 92  Q
    ||||||||||||| | ||||||| || ||||||||||||||| |||||||| | ||||||||||||||||||    
T  16455716 tctcaaggtttacaccgatacaaggtatatatttatagtaaaggtatccctga-aaaattggaacaaatctg 16455786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 7 - 88
Target Start/End: Original strand, 3234008 - 3234088
Alignment:
Q  7 tttcagtcccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaa 88  Q
    |||||| ||||||||||| ||||||||| | ||||||| || ||||||||||||||||| |||| |||| |||||||||||||    
T  3234008 tttcagccccctctatcttaaggtttacactgatacaa-gtctatatttatagtaaaagcatccttcat-aaattggaacaaa 3234088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 220 - 258
Target Start/End: Complemental strand, 13039574 - 13039536
Alignment:
Q  220 aaatcggccaccgattttctgcttccagaatttcaattt 258  Q
    ||||||||||||| |||||||||||||||||||||||||    
T  13039574 aaatcggccaccggttttctgcttccagaatttcaattt 13039536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 7 - 92
Target Start/End: Original strand, 15532958 - 15533043
Alignment:
Q  7 tttcagtcccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaatctg 92  Q
    |||||| |||||||||||||| ||||| || ||||||| || ||||||||||||||||||||  || | ||| ||||||||||||||    
T  15532958 tttcagccccctctatctcaaagtttagtctgatacaaggtctatatttatagtaaaagtataactta-aaatttggaacaaatctg 15533043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 15 - 91
Target Start/End: Original strand, 3632223 - 3632300
Alignment:
Q  15 ccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaatct 91  Q
    |||||||||||||||||||| | ||||||| || ||||||||||||||| | ||||   |||||| ||||||||||||    
T  3632223 ccctctatctcaaggtttacactgatacaatgtctatatttatagtaaacgaatcctcaataaaactggaacaaatct 3632300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 3028121 - 3028189
Alignment:
Q  1 ccttgttttcagtcccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatc 68  Q
    |||||||||||| ||| | ||||||| ||||||||  ||||||| || |||||||||||||||||||||    
T  3028121 ccttgttttcagccccttttatctcatggtttactttgatacaaggtctatatttatagtaaaagtatc 3028189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 37 - 89
Target Start/End: Original strand, 30034915 - 30034967
Alignment:
Q  37 gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaat 89  Q
    ||||||| || ||||||||||||||||||||  |||||||| |||||||||||    
T  30034915 gatacaaggtctatatttatagtaaaagtataactcataaatttggaacaaat 30034967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 92
Target Start/End: Original strand, 1072165 - 1072239
Alignment:
Q  18 tctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaatctg 92  Q
    |||||||||| |||||||| ||||||| || ||||||||||||||||||||  || | ||| ||||||||||||||    
T  1072165 tctatctcaaagtttactctgatacaatgtctatatttatagtaaaagtattgctta-aaatttggaacaaatctg 1072239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 17 - 91
Target Start/End: Complemental strand, 14466360 - 14466285
Alignment:
Q  17 ctctatctcaaggtttactcga-tacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaatct 91  Q
    ||||||||||||||||| || | |||||||| ||||| ||||||||||| ||||   |||||| ||||||||||||    
T  14466360 ctctatctcaaggtttattctaatacaaagtctatatctatagtaaaagaatcctcaataaaactggaacaaatct 14466285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 14507447 - 14507536
Alignment:
Q  1 ccttgttttcagtcccctctatctcaaggtttactcga-tacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaatct 91  Q
    ||||||||| || |||||||||||||| |||| ||| | ||||| || ||||||||||||||||||||| || | ||| |||||||||||||    
T  14507447 ccttgtttt-agccccctctatctcaaagtttgctctaatacaaggtctatatttatagtaaaagtatcgctta-aaatttggaacaaatct 14507536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 7 - 65
Target Start/End: Original strand, 15541417 - 15541476
Alignment:
Q  7 tttcagtcccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagt 65  Q
    |||||| |||||||||||||| ||||| || ||||||| || ||||||||||||||||||    
T  15541417 tttcagccccctctatctcaaagtttagtctgatacaaggtctatatttatagtaaaagt 15541476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 8 - 58
Target Start/End: Complemental strand, 17012080 - 17012029
Alignment:
Q  8 ttcagtcccctctatctcaaggtttact-cgatacaaagtttatatttatag 58  Q
    ||||| |||||||||||||||||||||| |||||||| || |||||||||||    
T  17012080 ttcagacccctctatctcaaggtttactccgatacaaggtctatatttatag 17012029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 220 - 263
Target Start/End: Complemental strand, 20219977 - 20219934
Alignment:
Q  220 aaatcggccaccgattttctgcttccagaatttcaattttgagg 263  Q
    ||||||||||||||||||| ||||||| |||| |||||||||||    
T  20219977 aaatcggccaccgattttcagcttccataattccaattttgagg 20219934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 38 - 89
Target Start/End: Complemental strand, 30967203 - 30967152
Alignment:
Q  38 atacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaat 89  Q
    |||||| || ||||||||||||||||||||  |||||||| |||||||||||    
T  30967203 atacaaggtctatatttatagtaaaagtataactcataaatttggaacaaat 30967152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 220 - 258
Target Start/End: Complemental strand, 13057014 - 13056976
Alignment:
Q  220 aaatcggccaccgattttctgcttccagaatttcaattt 258  Q
    |||||||||||| ||||||||||||||||||| ||||||    
T  13057014 aaatcggccaccaattttctgcttccagaattccaattt 13056976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 14 - 91
Target Start/End: Original strand, 13870705 - 13870783
Alignment:
Q  14 cccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaatct 91  Q
    ||||||||||||||||||| ||| |||||||||  ||||||||||  ||||| ||||   |||||| ||||||||||||    
T  13870705 cccctctatctcaaggtttgctctgatacaaagcctatatttatataaaaagaatcctcaataaaactggaacaaatct 13870783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 220 - 258
Target Start/End: Original strand, 24338963 - 24339001
Alignment:
Q  220 aaatcggccaccgattttctgcttccagaatttcaattt 258  Q
    |||||||||||||||||||  ||||||||||||||||||    
T  24338963 aaatcggccaccgattttcatcttccagaatttcaattt 24339001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 7 - 91
Target Start/End: Complemental strand, 13039791 - 13039706
Alignment:
Q  7 tttcagtcccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaatct 91  Q
    |||||| | ||| ||||||||||||||| | |||||||  | ||||||||||||||||| ||||   |||||| ||||||||||||    
T  13039791 tttcagcctcctatatctcaaggtttacactgatacaatatctatatttatagtaaaagaatcctcaataaaactggaacaaatct 13039706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 8 - 68
Target Start/End: Original strand, 15530400 - 15530461
Alignment:
Q  8 ttcagtcccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatc 68  Q
    ||||| ||||||||||||   |||||||| ||||||| || |||||||||||||||||||||    
T  15530400 ttcagccccctctatctcccagtttactctgatacaaggtctatatttatagtaaaagtatc 15530461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 7 - 91
Target Start/End: Complemental strand, 22490676 - 22490591
Alignment:
Q  7 tttcagtcccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaatct 91  Q
    |||||| ||||||||||||||||||||| |  || ||| || ||||||||| ||||||| ||||   |||||| ||||||||||||    
T  22490676 tttcagccccctctatctcaaggtttacactaattcaatgtctatatttatggtaaaagaatcctcaataaaactggaacaaatct 22490591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 37 - 89
Target Start/End: Original strand, 2629198 - 2629250
Alignment:
Q  37 gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaat 89  Q
    ||||||| || ||||||||||||||||||||  || ||||| |||||||||||    
T  2629198 gatacaaggtctatatttatagtaaaagtataactaataaatttggaacaaat 2629250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 8995521 - 8995431
Alignment:
Q  1 ccttgttttcagtcccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaatctg 92  Q
    ||||||||| || ||||||||||||   |||||||| |||||||  | ||||||||||||||||||||| || | ||| ||||||||||||||    
T  8995521 ccttgtttt-agccccctctatctctcagtttactctgatacaagatctatatttatagtaaaagtatcgctta-aaatttggaacaaatctg 8995431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 9019968 - 9019878
Alignment:
Q  1 ccttgttttcagtcccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaatctg 92  Q
    ||||||||| || ||||||||||||   |||||||| |||||||  | ||||||||||||||||||||| || | ||| ||||||||||||||    
T  9019968 ccttgtttt-agccccctctatctctcagtttactctgatacaagatctatatttatagtaaaagtatcgctta-aaatttggaacaaatctg 9019878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 44; Significance: 7e-16; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 16918 - 17008
Alignment:
Q  1 ccttgttttcagtcccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaatct 91  Q
    |||||||||||| | ||||||||||||||||||||| ||||||| ||||||||||||| ||||| ||| ||| | ||||||| |||||||||    
T  16918 ccttgttttcagcctcctctatctcaaggtttactctgatacaaggtttatatttatattaaaattat-cctaaaaaaattgaaacaaatct 17008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 7 - 88
Target Start/End: Complemental strand, 79870 - 79789
Alignment:
Q  7 tttcagtcccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaa 88  Q
    |||||| ||||||||||||||||||||| | ||||||||   ||||||||||||||||| ||||||||| |||||||||||||    
T  79870 tttcagccccctctatctcaaggtttacactgatacaaaaactatatttatagtaaaagaatccctcat-aaattggaacaaa 79789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 7 - 85
Target Start/End: Original strand, 11750 - 11829
Alignment:
Q  7 tttcagtcccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaac 85  Q
    |||||| |||||||||||| |||||||||| ||| ||| || ||||||||||||||||||||  |||||||| |||||||    
T  11750 tttcagccccctctatctccaggtttactctgattcaaggtctatatttatagtaaaagtataactcataaatttggaac 11829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 18 - 88
Target Start/End: Complemental strand, 85231 - 85161
Alignment:
Q  18 tctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaa 88  Q
    ||||||||||||||||||  |||||||||  ||||||||||||||||| ||||||||| |||||||||||||    
T  85231 tctatctcaaggtttactttgatacaaagcctatatttatagtaaaagaatccctcat-aaattggaacaaa 85161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 7 - 92
Target Start/End: Complemental strand, 15030 - 14945
Alignment:
Q  7 tttcagtcccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaatctg 92  Q
    |||||| |||||||||||||| |||| ||| ||||||| || ||||||||||||||||||||| || | ||| ||||||||||||||    
T  15030 tttcagccccctctatctcaaagtttgctctgatacaaggtctatatttatagtaaaagtatcgctta-aaatttggaacaaatctg 14945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0133 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0133
Description:

Target: scaffold0133; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 4831 - 4773
Alignment:
Q  1 ccttgttttcagtcccctctatctcaaggtttactc-gatacaaagtttatatttatag 58  Q
    |||| ||||||| ||||||||||||||||||||||| ||||||| || |||||||||||    
T  4831 cctttttttcagacccctctatctcaaggtttactctgatacaaggtctatatttatag 4773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0339 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0339
Description:

Target: scaffold0339; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 7 - 67
Target Start/End: Complemental strand, 4008 - 3947
Alignment:
Q  7 tttcagtcccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtat 67  Q
    |||||| |||||||||||||| ||||| || ||||||| || ||||||||||||||||||||    
T  4008 tttcagccccctctatctcaaagtttagtctgatacaaggtctatatttatagtaaaagtat 3947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 79201 - 79117
Alignment:
Q  1 ccttgttttcagtcccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaac 85  Q
    ||||||||| || ||||||||||||||| ||||||| ||| ||| || ||||||||||||||| ||||  |||||||| |||||||    
T  79201 ccttgtttt-agccccctctatctcaagttttactctgattcaaggtctatatttatagtaaaggtataactcataaatttggaac 79117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0250 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 7 - 92
Target Start/End: Complemental strand, 2891 - 2806
Alignment:
Q  7 tttcagtcccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaatctg 92  Q
    |||||| |||||||||||||| |||| ||| |||||||  | |||||||||||||||||| || || | ||| ||||||||||||||    
T  2891 tttcagccccctctatctcaaagtttgctctgatacaagttctatatttatagtaaaagtttcgctta-aaatttggaacaaatctg 2806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 37 - 85
Target Start/End: Complemental strand, 51989 - 51941
Alignment:
Q  37 gatacaaagtttatatttatagtaaaagtatccctcataaaattggaac 85  Q
    ||||||| || ||||||||||||||||||||  |||||||| |||||||    
T  51989 gatacaaggtctatatttatagtaaaagtataactcataaatttggaac 51941  T

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