View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3164_high_30 (Length: 264)
Name: NF3164_high_30
Description: NF3164
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3164_high_30 |
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Alignment Details
Target: chr7 (Bit Score: 246; Significance: 1e-136; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 1 - 262
Target Start/End: Original strand, 48449456 - 48449717
Alignment:
| Q |
1 |
ttaacatgtttgaagctttgtggtctgatatgaagtttttgattcacagaaatccaatatagtggaggatcttgctgacttgcacaacaatcaaaagcta |
100 |
Q |
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| T |
48449456 |
ttaacatgtttgaagctttgtggtctgatatgaagtttttgattcacagaaatccaatatagtggagtatcttgctgacttgcacaacaatcaaaagcta |
48449555 |
T |
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| Q |
101 |
tggcctacacagcagttggcatacctacctctccaacaacgtcttcaactaaggacattacaaaagaacgttatggtcttcgccgctcacgctccagcat |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
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| T |
48449556 |
tggcctacacagcagttggcatacctacctctccaacaacgtcttcaactaaggacattacaaaagaacgttatggtcttcgccgctcgcgctccagcat |
48449655 |
T |
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| Q |
201 |
agacctatgtagacgttccattatgcagaggtcttattctgacagctatctgtgctgctcct |
262 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||| |
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| T |
48449656 |
agacctatgtagacgttccattatgcagaggtcttattctgacagctatctatgttgctcct |
48449717 |
T |
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