View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3164_high_36 (Length: 251)
Name: NF3164_high_36
Description: NF3164
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3164_high_36 |
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Alignment Details
Target: chr8 (Bit Score: 217; Significance: 1e-119; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 11 - 235
Target Start/End: Original strand, 35406085 - 35406309
Alignment:
| Q |
11 |
gaaggaaactcataacctaggttctttttcacattttcatgatttataaaagtgtcgtattattcaaaagtttttaatagtcttggtattgagaacctca |
110 |
Q |
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| T |
35406085 |
gaaggaaactcataacctaggttctttttcacattttcatgatttctaaaagtgtcgtattcttcaaaagtttttaatagtcttggtattgagaacctca |
35406184 |
T |
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| Q |
111 |
agtagagaggggtagcactatcactatccttgtcccatgtttcatcttcgacaactccttttacgaaaattttaagcatagttcaaagatgaataatttg |
210 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35406185 |
agtagagaggggtagcactatcactatccttgtcccatgtttcatcttcgacaactccttttacgaaaattttaagcatagttcaaagatgaataatttg |
35406284 |
T |
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| Q |
211 |
actcctatttatagatagaaaatgg |
235 |
Q |
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||||||||||||||||||||||||| |
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| T |
35406285 |
actcctatttatagatagaaaatgg |
35406309 |
T |
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