View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3164_high_47 (Length: 238)
Name: NF3164_high_47
Description: NF3164
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3164_high_47 |
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| [»] chr3 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 179; Significance: 1e-96; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 52 - 238
Target Start/End: Original strand, 5993950 - 5994136
Alignment:
| Q |
52 |
atgctaccagtcatccttaagatctggatgttttgatcataataaaattagacaattgctaatataggtaggtgctgaatttgatgatcatgcaccaaca |
151 |
Q |
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| T |
5993950 |
atgctaccagtcatccttaagatcttgatgttttgatcataataaaattagacaattgctaatataggtaggtgctgaatttgatgatcatgcaccaaca |
5994049 |
T |
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| Q |
152 |
tataaaattatcaagcttgtatgaggtattgtttgaatgatcaatgacatttgaaagcaaagactaagaatgattaatcagtcatat |
238 |
Q |
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| T |
5994050 |
tataaaattatcaagcttgtatgatgtattgtttgaatgatcaatgacatttgaaagcaaagactaagaatgattaatcagtcatat |
5994136 |
T |
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