View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3170_low_12 (Length: 256)

Name: NF3170_low_12
Description: NF3170
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3170_low_12
NF3170_low_12
[»] chr1 (42 HSPs)
chr1 (16-256)||(39219230-39219470)
chr1 (127-256)||(48125671-48125800)
chr1 (142-244)||(29871288-29871390)
chr1 (139-224)||(23058470-23058555)
chr1 (140-254)||(36421740-36421854)
chr1 (139-224)||(34673282-34673367)
chr1 (142-224)||(44615478-44615560)
chr1 (142-224)||(44793009-44793091)
chr1 (139-228)||(17134947-17135036)
chr1 (139-244)||(19572512-19572617)
chr1 (139-244)||(24236761-24236866)
chr1 (183-244)||(29936400-29936461)
chr1 (183-244)||(34085219-34085280)
chr1 (139-220)||(50426661-50426742)
chr1 (183-243)||(12494995-12495055)
chr1 (183-243)||(28297919-28297979)
chr1 (209-256)||(33293590-33293637)
chr1 (139-238)||(36187220-36187319)
chr1 (189-252)||(42728994-42729057)
chr1 (158-224)||(16903527-16903593)
chr1 (182-244)||(42439713-42439775)
chr1 (183-252)||(23490815-23490884)
chr1 (132-256)||(8880420-8880544)
chr1 (192-224)||(9982943-9982975)
chr1 (192-224)||(49741060-49741092)
chr1 (192-244)||(51421842-51421894)
chr1 (163-238)||(34611063-34611138)
chr1 (158-224)||(10450078-10450144)
chr1 (142-256)||(13798210-13798324)
chr1 (142-224)||(35069892-35069974)
chr1 (190-256)||(41477003-41477069)
chr1 (142-252)||(43513033-43513142)
chr1 (139-221)||(45866185-45866267)
chr1 (137-218)||(3627983-3628064)
chr1 (139-244)||(16408926-16409031)
chr1 (139-244)||(18354080-18354185)
chr1 (92-149)||(20774657-20774714)
chr1 (89-121)||(10450015-10450047)
chr1 (192-244)||(13390397-13390449)
chr1 (102-224)||(16433130-16433249)
chr1 (183-243)||(23966858-23966918)
chr1 (157-249)||(25154845-25154937)
[»] chr6 (31 HSPs)
chr6 (85-256)||(32959832-32960002)
chr6 (98-255)||(8320754-8320911)
chr6 (90-226)||(29199836-29199972)
chr6 (142-256)||(256495-256609)
chr6 (142-255)||(20349036-20349149)
chr6 (139-223)||(28079696-28079780)
chr6 (157-255)||(34346023-34346121)
chr6 (88-256)||(9402560-9402727)
chr6 (92-224)||(14410809-14410940)
chr6 (192-255)||(13769044-13769107)
chr6 (139-244)||(12309555-12309660)
chr6 (139-244)||(32853827-32853932)
chr6 (188-256)||(1947840-1947908)
chr6 (137-224)||(24602854-24602941)
chr6 (145-238)||(15498313-15498406)
chr6 (139-244)||(27738755-27738860)
chr6 (183-243)||(3483967-3484027)
chr6 (139-243)||(5863383-5863487)
chr6 (192-244)||(12141368-12141420)
chr6 (139-224)||(2367329-2367414)
chr6 (139-224)||(10142518-10142603)
chr6 (183-244)||(24225681-24225742)
chr6 (139-208)||(34178329-34178398)
chr6 (192-224)||(10188126-10188158)
chr6 (183-243)||(27534668-27534728)
chr6 (145-244)||(32532523-32532622)
chr6 (139-228)||(14254957-14255045)
chr6 (110-226)||(7393858-7393974)
chr6 (192-224)||(12678147-12678179)
chr6 (142-246)||(29341237-29341341)
chr6 (183-243)||(32053072-32053132)
[»] chr4 (54 HSPs)
chr4 (142-256)||(21956818-21956932)
chr4 (139-226)||(14605926-14606013)
chr4 (89-224)||(29527821-29527956)
chr4 (89-224)||(30266281-30266416)
chr4 (89-224)||(30285772-30285907)
chr4 (148-251)||(42907868-42907971)
chr4 (142-251)||(19883060-19883169)
chr4 (111-252)||(25298806-25298947)
chr4 (139-243)||(6382273-6382377)
chr4 (137-224)||(31782622-31782709)
chr4 (190-256)||(9929219-9929285)
chr4 (142-224)||(25941147-25941229)
chr4 (95-238)||(32585484-32585633)
chr4 (139-256)||(35304517-35304635)
chr4 (156-254)||(37926538-37926636)
chr4 (139-244)||(31752445-31752550)
chr4 (163-256)||(33516097-33516190)
chr4 (89-224)||(10574370-10574505)
chr4 (158-256)||(12075651-12075749)
chr4 (190-256)||(16575089-16575155)
chr4 (139-224)||(1724311-1724396)
chr4 (139-224)||(6482036-6482121)
chr4 (139-224)||(21544588-21544673)
chr4 (143-256)||(36306762-36306875)
chr4 (183-244)||(47550398-47550459)
chr4 (183-243)||(5902659-5902719)
chr4 (183-243)||(7608960-7609020)
chr4 (139-243)||(11122870-11122974)
chr4 (183-243)||(44317525-44317585)
chr4 (145-221)||(48459493-48459569)
chr4 (148-202)||(3516348-3516402)
chr4 (192-254)||(9280943-9281005)
chr4 (190-256)||(36919100-36919166)
chr4 (139-224)||(11028082-11028167)
chr4 (139-224)||(15987263-15987348)
chr4 (139-224)||(47103747-47103832)
chr4 (183-244)||(53906350-53906411)
chr4 (183-243)||(26564821-26564881)
chr4 (183-243)||(55826668-55826728)
chr4 (189-224)||(568426-568461)
chr4 (189-256)||(8843856-8843922)
chr4 (189-256)||(8856820-8856886)
chr4 (164-243)||(21423851-21423930)
chr4 (164-243)||(31918584-31918663)
chr4 (157-224)||(45065258-45065325)
chr4 (184-254)||(4741262-4741331)
chr4 (139-221)||(10302096-10302178)
chr4 (139-221)||(47239386-47239468)
chr4 (157-226)||(1866568-1866637)
chr4 (92-149)||(26564927-26564984)
chr4 (139-244)||(39046941-39047046)
chr4 (190-254)||(4237346-4237410)
chr4 (190-226)||(23927693-23927729)
chr4 (192-228)||(28695196-28695232)
[»] chr8 (36 HSPs)
chr8 (142-251)||(8545352-8545461)
chr8 (92-224)||(17469258-17469390)
chr8 (157-256)||(27777216-27777315)
chr8 (143-224)||(17084111-17084192)
chr8 (143-256)||(12468223-12468335)
chr8 (143-248)||(14687378-14687483)
chr8 (142-251)||(30481424-30481533)
chr8 (139-243)||(24927933-24928037)
chr8 (190-256)||(28345462-28345528)
chr8 (139-224)||(20399595-20399680)
chr8 (139-218)||(27932422-27932501)
chr8 (142-237)||(37960965-37961060)
chr8 (191-256)||(29918578-29918643)
chr8 (142-255)||(30904018-30904130)
chr8 (139-252)||(45236040-45236153)
chr8 (192-228)||(1012618-1012654)
chr8 (192-252)||(14186295-14186355)
chr8 (148-244)||(24870033-24870129)
chr8 (183-243)||(32303045-32303105)
chr8 (163-223)||(34777070-34777130)
chr8 (157-256)||(9476031-9476130)
chr8 (89-244)||(9642301-9642456)
chr8 (139-204)||(6388516-6388581)
chr8 (139-220)||(15068588-15068668)
chr8 (139-244)||(29108822-29108927)
chr8 (139-244)||(39445576-39445681)
chr8 (183-226)||(40789590-40789633)
chr8 (183-221)||(2075864-2075902)
chr8 (142-224)||(2183609-2183691)
chr8 (157-223)||(5700360-5700426)
chr8 (214-256)||(14155503-14155545)
chr8 (92-149)||(2075775-2075832)
chr8 (143-224)||(10297461-10297542)
chr8 (190-223)||(36897060-36897093)
chr8 (148-221)||(40248380-40248453)
chr8 (183-223)||(43113670-43113710)
[»] scaffold0005 (1 HSPs)
scaffold0005 (139-226)||(211365-211452)
[»] chr5 (32 HSPs)
chr5 (92-253)||(6810132-6810293)
chr5 (92-244)||(35193943-35194095)
chr5 (92-243)||(12447365-12447515)
chr5 (93-224)||(12712512-12712643)
chr5 (89-256)||(17153140-17153306)
chr5 (145-244)||(30996579-30996678)
chr5 (148-256)||(8020586-8020694)
chr5 (92-252)||(38006423-38006583)
chr5 (89-220)||(10822477-10822608)
chr5 (139-244)||(4920809-4920914)
chr5 (142-223)||(28569025-28569106)
chr5 (192-244)||(10127064-10127116)
chr5 (142-254)||(16311297-16311409)
chr5 (146-254)||(18451893-18452001)
chr5 (139-223)||(20973497-20973581)
chr5 (93-224)||(12773776-12773907)
chr5 (145-244)||(15890190-15890288)
chr5 (139-244)||(4583102-4583207)
chr5 (183-244)||(6092563-6092624)
chr5 (183-252)||(12834619-12834688)
chr5 (139-244)||(12866552-12866657)
chr5 (183-256)||(29664942-29665015)
chr5 (196-244)||(22694959-22695007)
chr5 (142-254)||(38972895-38973007)
chr5 (192-244)||(42987533-42987585)
chr5 (141-256)||(32574941-32575056)
chr5 (139-221)||(29245952-29246034)
chr5 (142-256)||(40187661-40187774)
chr5 (183-244)||(1218738-1218799)
chr5 (189-254)||(7350458-7350523)
chr5 (207-256)||(12457488-12457537)
chr5 (139-224)||(23044992-23045077)
[»] chr2 (28 HSPs)
chr2 (95-243)||(6027845-6027993)
chr2 (139-237)||(13705361-13705459)
chr2 (142-256)||(30696896-30697010)
chr2 (183-256)||(4961495-4961568)
chr2 (139-224)||(38342519-38342604)
chr2 (140-243)||(35248386-35248489)
chr2 (139-244)||(8915938-8916042)
chr2 (139-244)||(37999467-37999572)
chr2 (183-243)||(24414176-24414236)
chr2 (189-253)||(35965310-35965374)
chr2 (137-224)||(18485652-18485739)
chr2 (141-224)||(43371557-43371640)
chr2 (138-256)||(25210349-25210467)
chr2 (139-244)||(7314648-7314753)
chr2 (139-220)||(24051624-24051705)
chr2 (183-224)||(30846950-30846991)
chr2 (139-220)||(37106700-37106781)
chr2 (183-243)||(36128150-36128210)
chr2 (192-243)||(9632371-9632422)
chr2 (139-254)||(34458833-34458947)
chr2 (139-221)||(22900801-22900883)
chr2 (143-224)||(3547170-3547251)
chr2 (183-224)||(14331531-14331572)
chr2 (163-224)||(42798012-42798073)
chr2 (192-253)||(45256798-45256859)
chr2 (192-244)||(10920629-10920681)
chr2 (89-121)||(39256398-39256430)
chr2 (157-217)||(45115569-45115629)
[»] chr7 (43 HSPs)
chr7 (92-236)||(24425376-24425520)
chr7 (139-244)||(16866157-16866262)
chr7 (139-221)||(10072477-10072559)
chr7 (139-229)||(26622954-26623044)
chr7 (139-224)||(18825872-18825957)
chr7 (87-224)||(19439958-19440095)
chr7 (87-228)||(23533552-23533692)
chr7 (139-224)||(32546200-32546285)
chr7 (184-256)||(3157059-3157131)
chr7 (139-243)||(35074459-35074563)
chr7 (92-223)||(3920547-3920678)
chr7 (139-244)||(8906589-8906694)
chr7 (139-244)||(27850326-27850431)
chr7 (140-256)||(4101518-4101634)
chr7 (183-243)||(45380096-45380156)
chr7 (139-218)||(3226946-3227025)
chr7 (141-224)||(31426016-31426099)
chr7 (145-228)||(48327449-48327532)
chr7 (190-256)||(3774045-3774111)
chr7 (142-228)||(16079017-16079103)
chr7 (142-223)||(5377094-5377175)
chr7 (139-224)||(12980385-12980470)
chr7 (139-244)||(17885453-17885558)
chr7 (139-224)||(18683982-18684067)
chr7 (142-219)||(25782910-25782987)
chr7 (183-244)||(30650619-30650680)
chr7 (139-244)||(38152875-38152980)
chr7 (139-244)||(41103644-41103749)
chr7 (142-238)||(10995837-10995933)
chr7 (183-243)||(18125272-18125332)
chr7 (183-243)||(21702648-21702708)
chr7 (139-256)||(29292678-29292797)
chr7 (145-244)||(43507433-43507532)
chr7 (192-238)||(7780002-7780048)
chr7 (139-224)||(2630574-2630658)
chr7 (92-149)||(17851947-17852004)
chr7 (139-224)||(22973396-22973481)
chr7 (95-224)||(28309500-28309629)
chr7 (192-224)||(17851862-17851894)
chr7 (192-244)||(37196051-37196103)
chr7 (183-223)||(37579271-37579311)
chr7 (196-224)||(44794084-44794112)
chr7 (192-244)||(45885818-45885870)
[»] scaffold0036 (1 HSPs)
scaffold0036 (139-228)||(33392-33481)
[»] chr3 (36 HSPs)
chr3 (142-256)||(30904819-30904932)
chr3 (158-244)||(48305660-48305746)
chr3 (183-244)||(44639257-44639318)
chr3 (183-244)||(52198138-52198199)
chr3 (139-228)||(53631903-53631992)
chr3 (183-243)||(23546986-23547046)
chr3 (157-223)||(34119660-34119726)
chr3 (139-228)||(4016044-4016133)
chr3 (139-244)||(44172609-44172714)
chr3 (139-244)||(44179309-44179414)
chr3 (98-256)||(772756-772911)
chr3 (139-243)||(34154398-34154502)
chr3 (139-238)||(7469778-7469877)
chr3 (157-218)||(29842317-29842378)
chr3 (183-224)||(31271301-31271342)
chr3 (139-224)||(39655273-39655358)
chr3 (183-244)||(39728654-39728715)
chr3 (183-224)||(44252750-44252791)
chr3 (139-223)||(4557305-4557389)
chr3 (158-221)||(23580833-23580896)
chr3 (192-243)||(31126848-31126899)
chr3 (137-244)||(49025664-49025770)
chr3 (139-221)||(10043282-10043364)
chr3 (214-256)||(42243358-42243400)
chr3 (139-221)||(48390817-48390899)
chr3 (158-251)||(3385875-3385968)
chr3 (183-244)||(22535885-22535946)
chr3 (183-224)||(29284339-29284380)
chr3 (92-149)||(29284426-29284483)
chr3 (189-254)||(40890319-40890384)
chr3 (139-244)||(49580047-49580152)
chr3 (183-224)||(54317147-54317188)
chr3 (89-125)||(1772337-1772373)
chr3 (198-242)||(2487780-2487824)
chr3 (89-149)||(10043220-10043280)
chr3 (139-243)||(44953435-44953539)
[»] scaffold0184 (1 HSPs)
scaffold0184 (142-224)||(2972-3054)
[»] scaffold0022 (1 HSPs)
scaffold0022 (139-244)||(90580-90685)
[»] scaffold0013 (2 HSPs)
scaffold0013 (183-224)||(105513-105554)
scaffold0013 (189-224)||(128171-128206)
[»] scaffold0294 (1 HSPs)
scaffold0294 (192-244)||(14758-14810)
[»] scaffold0198 (1 HSPs)
scaffold0198 (189-254)||(20789-20854)
[»] scaffold0015 (1 HSPs)
scaffold0015 (183-224)||(55941-55982)
[»] scaffold0009 (1 HSPs)
scaffold0009 (191-256)||(107443-107508)
[»] scaffold0008 (2 HSPs)
scaffold0008 (139-224)||(67752-67837)
scaffold0008 (139-224)||(75595-75680)


Alignment Details
Target: chr1 (Bit Score: 173; Significance: 4e-93; HSPs: 42)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 16 - 256
Target Start/End: Complemental strand, 39219470 - 39219230
Alignment:
Q  16 agtatcaaatatttataagtaccaagaacaacatgtacattgtgtattaaatagcaacaaaacctattaatgcgggtacccgcccaaaccaatcccaatt 115  Q
    |||| |||||||||||  ||||||||||||||||||||||||||||| || ||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  39219470 agtaccaaatatttatcggtaccaagaacaacatgtacattgtgtatcaagtagcaacaaaacccattcatgcgggtacccgcccaaaccaatcccaatt 39219371  T
Q  116 tgacggatttccttcgcttttactgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaaccca 215  Q
    |||||| |||||||||||||||  |||||||||||||| | |||||||||||||||||||| |||||||||| |||||| | ||||||||||||||||||    
T  39219370 tgacgggtttccttcgcttttatcgggtttgggttttccccgattttaaaacacgggtacggaacaagtaacggggatacatgtacccaccccgaaccca 39219271  T
Q  216 tacccaaactcgttctaaatgtagaaaatcaatttattacc 256  Q
    ||||||||||||||||||||||||||||| |||||||||||    
T  39219270 tacccaaactcgttctaaatgtagaaaattaatttattacc 39219230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 127 - 256
Target Start/End: Original strand, 48125671 - 48125800
Alignment:
Q  127 cttcgcttttactgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactc 226  Q
    ||||| ||| |||| |||||| ||||  ||||||||||||||||||||||  ||  |||||  ||||||||||| |||||||||||||||||||||||||    
T  48125671 cttcgttttgactgagtttggatttttcctgattttaaaacacgggtacgggacgggtaacgaggatataggtatccaccccgaacccatacccaaactc 48125770  T
Q  227 gttctaaatgtagaaaatcaatttattacc 256  Q
    ||    ||||||||||||||||||| ||||    
T  48125771 gtcgcgaatgtagaaaatcaatttactacc 48125800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 142 - 244
Target Start/End: Original strand, 29871288 - 29871390
Alignment:
Q  142 gtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaa 241  Q
    |||||||||||||| ||||| |||||| ||||| |  ||| |||||||| |||||||||||||||| |||| ||||||||||| ||| |  |||||||||    
T  29871288 gtttgggttttctccgatttcaaaacatgggtatgggacaggtaactggtatataggtacccaccctgaactcatacccaaacccgtcccgaatgtagaa 29871387  T
Q  242 aat 244  Q
    |||    
T  29871388 aat 29871390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 139 - 224
Target Start/End: Complemental strand, 23058555 - 23058470
Alignment:
Q  139 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaac 224  Q
    |||||||| |||||||| ||||| ||||  || |||||| ||  ||||| ||||||||||||||||||||||||||||||||||||    
T  23058555 tgggtttgagttttctccgatttcaaaatgcgagtacgagacgggtaacggggatataggtacccaccccgaacccatacccaaac 23058470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 140 - 254
Target Start/End: Complemental strand, 36421854 - 36421740
Alignment:
Q  140 gggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtag 239  Q
    |||| |||||||||||  ||| ||||| |||||||||  | ||||||  ||||||||||||| ||||||||||  ||||||||||||||    ||| |||    
T  36421854 gggtatgggttttctccaattataaaatacgggtacgggataagtaatagggatataggtactcaccccgaacttatacccaaactcgtctcgaatatag 36421755  T
Q  240 aaaatcaatttatta 254  Q
    |||||||||||||||    
T  36421754 aaaatcaatttatta 36421740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 139 - 224
Target Start/End: Original strand, 34673282 - 34673367
Alignment:
Q  139 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaac 224  Q
    ||||||||||||||  |  |||| |||||||||||| || ||  ||||| || |||||||||||||||||||||||||||||||||    
T  34673282 tgggtttgggtttttcccaatttcaaaacacgggtatgagactggtaacgggtatataggtacccaccccgaacccatacccaaac 34673367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 142 - 224
Target Start/End: Original strand, 44615478 - 44615560
Alignment:
Q  142 gtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaac 224  Q
    |||||||||||| ||||||| |||||||||||| |  ||  ||||| || ||||||||||||||||| ||| |||||||||||    
T  44615478 gtttgggttttccctgatttaaaaacacgggtatgggacgggtaacaggtatataggtacccaccccaaactcatacccaaac 44615560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 142 - 224
Target Start/End: Complemental strand, 44793091 - 44793009
Alignment:
Q  142 gtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaac 224  Q
    |||||||||||| ||||||| |||||||||||| |  ||  ||||| || ||||||||||||||||| ||| |||||||||||    
T  44793091 gtttgggttttccctgatttaaaaacacgggtatgggacgggtaacaggtatataggtacccaccccaaactcatacccaaac 44793009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 139 - 228
Target Start/End: Complemental strand, 17135036 - 17134947
Alignment:
Q  139 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgt 228  Q
    ||||| ||||||||| | ||||| |||||||||||| || ||  ||||| || |||||||||||  ||||||||||||||||| ||||||    
T  17135036 tgggtatgggttttccccgatttcaaaacacgggtatgagacgggtaacgggtatataggtaccatccccgaacccatacccatactcgt 17134947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 139 - 244
Target Start/End: Original strand, 19572512 - 19572617
Alignment:
Q  139 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgta 238  Q
    ||||| ||||||||  | ||||| |||||||||||| |  ||| ||||| || ||||||||||||||||||||||||||| || || ||| | |||||||    
T  19572512 tgggtatgggtttttcccgatttcaaaacacgggtatgggacaggtaacgggtatataggtacccaccccgaacccatactcatacccgtcccaaatgta 19572611  T
Q  239 gaaaat 244  Q
     |||||    
T  19572612 aaaaat 19572617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 139 - 244
Target Start/End: Original strand, 24236761 - 24236866
Alignment:
Q  139 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgta 238  Q
    ||||| ||||||||| | ||| | |||||||||||| | |||  | ||| || ||||||||||||||||||||||||||| ||||| ||| | |||||||    
T  24236761 tgggtatgggttttccccgatctcaaaacacgggtatggaacggggaacgggtatataggtacccaccccgaacccatactcaaacccgtcccaaatgta 24236860  T
Q  239 gaaaat 244  Q
     |||||    
T  24236861 aaaaat 24236866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 183 - 244
Target Start/End: Complemental strand, 29936461 - 29936400
Alignment:
Q  183 gtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaat 244  Q
    ||||| || ||||||||||||||||||||||||||||||||| ||| | ||||||| |||||    
T  29936461 gtaacgggtatataggtacccaccccgaacccatacccaaacccgtcccaaatgtaaaaaat 29936400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 183 - 244
Target Start/End: Complemental strand, 34085280 - 34085219
Alignment:
Q  183 gtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaat 244  Q
    ||||| ||| |||| |||||||||||||||||||||||| |||||| ||||||||| |||||    
T  34085280 gtaacggggttatatgtacccaccccgaacccatacccatactcgtcctaaatgtaaaaaat 34085219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 139 - 220
Target Start/End: Original strand, 50426661 - 50426742
Alignment:
Q  139 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccataccc 220  Q
    ||||| |||| |||| ||||||| |||||||||||| || ||   |||| || |||||||||||||||||||||||||||||    
T  50426661 tgggtatgggctttccctgatttcaaaacacgggtatgagacggataacgggtatataggtacccaccccgaacccataccc 50426742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 183 - 243
Target Start/End: Complemental strand, 12495055 - 12494995
Alignment:
Q  183 gtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaa 243  Q
    ||||| || ||||||||||||||| ||||||||||||||||| ||| | ||||||||||||    
T  12495055 gtaacgggtatataggtacccacctcgaacccatacccaaacccgtcccaaatgtagaaaa 12494995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 183 - 243
Target Start/End: Complemental strand, 28297979 - 28297919
Alignment:
Q  183 gtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaa 243  Q
    ||||| || ||||||||||||||||||||||||||||||||| ||| | ||||||| ||||    
T  28297979 gtaacgggtatataggtacccaccccgaacccatacccaaacccgtcccaaatgtaaaaaa 28297919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 209 - 256
Target Start/End: Original strand, 33293590 - 33293637
Alignment:
Q  209 gaacccatacccaaactcgttctaaatgtagaaaatcaatttattacc 256  Q
    ||||||||||||||||||||||  ||||||||||||||||||| ||||    
T  33293590 gaacccatacccaaactcgttccgaatgtagaaaatcaatttagtacc 33293637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 139 - 238
Target Start/End: Original strand, 36187220 - 36187319
Alignment:
Q  139 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgta 238  Q
    ||||| ||||||||| | ||| | |||||||||||| |  ||  ||||| || |||||||||||||||| |||||||||||||||| ||| | |||||||    
T  36187220 tgggtatgggttttccccgatctcaaaacacgggtatgggacgggtaacgggtatataggtacccaccctgaacccatacccaaacccgtcccaaatgta 36187319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 189 - 252
Target Start/End: Original strand, 42728994 - 42729057
Alignment:
Q  189 gggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaatcaatttat 252  Q
    ||||||| |||| | ||||||||| ||||||||||| |||||| |||||||||||| |||||||    
T  42728994 gggatatgggtaactaccccgaactcatacccaaacacgttctgaatgtagaaaataaatttat 42729057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 158 - 224
Target Start/End: Complemental strand, 16903593 - 16903527
Alignment:
Q  158 attttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaac 224  Q
    ||||||||||||| |||||  | | ||||  |||||||||||||||||||||||| |||||||||||    
T  16903593 attttaaaacacgagtacgggataggtaatggggatataggtacccaccccgaactcatacccaaac 16903527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 182 - 244
Target Start/End: Original strand, 42439713 - 42439775
Alignment:
Q  182 agtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaat 244  Q
    |||||| || |||||||||||||||||||||||||| |||||||| | | ||||||| |||||    
T  42439713 agtaacgggtatataggtacccaccccgaacccatatccaaactcatcccaaatgtaaaaaat 42439775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 183 - 252
Target Start/End: Original strand, 23490815 - 23490884
Alignment:
Q  183 gtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaatcaatttat 252  Q
    ||||| || |||||||||||||||||||||||||||| |||| ||| | ||||||| ||||  |||||||    
T  23490815 gtaacgggtatataggtacccaccccgaacccataccaaaacccgtcccaaatgtaaaaaactaatttat 23490884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 132 - 256
Target Start/End: Complemental strand, 8880544 - 8880420
Alignment:
Q  132 cttttactgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttct 231  Q
    |||| ||| ||||||||||||||  ||||| |||||||| ||||   ||| ||||  |||||| ||||| |||||| | |||||||||||||| ||| |     
T  8880544 ctttgacttggtttgggttttcttcgatttaaaaacacgagtacaggacaggtaatggggataaaggtatccaccctggacccatacccaaacccgtccc 8880445  T
Q  232 aaatgtagaaaatcaatttattacc 256  Q
    |||||   ||||| |||||||||||    
T  8880444 aaatgctaaaaataaatttattacc 8880420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 192 - 224
Target Start/End: Original strand, 9982943 - 9982975
Alignment:
Q  192 atataggtacccaccccgaacccatacccaaac 224  Q
    |||||||||||||||||||||||||||||||||    
T  9982943 atataggtacccaccccgaacccatacccaaac 9982975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 192 - 224
Target Start/End: Original strand, 49741060 - 49741092
Alignment:
Q  192 atataggtacccaccccgaacccatacccaaac 224  Q
    |||||||||||||||||||||||||||||||||    
T  49741060 atataggtacccaccccgaacccatacccaaac 49741092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 192 - 244
Target Start/End: Complemental strand, 51421894 - 51421842
Alignment:
Q  192 atataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaat 244  Q
    ||||| ||||||||||||||||||||||||||| ||| | ||||||| |||||    
T  51421894 atatatgtacccaccccgaacccatacccaaacccgtcccaaatgtaaaaaat 51421842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 163 - 238
Target Start/End: Complemental strand, 34611138 - 34611063
Alignment:
Q  163 aaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgta 238  Q
    |||||||||||| |  ||| |||||  | |||||||||| |||||||||||||||||||||| ||| | |||||||    
T  34611138 aaaacacgggtatgggacatgtaacgtgtatataggtactcaccccgaacccatacccaaacccgtcccaaatgta 34611063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 224
Target Start/End: Original strand, 10450078 - 10450144
Alignment:
Q  158 attttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaac 224  Q
    ||||||||| |||||||||   |  ||||| |||||||| ||||||||||||||| |||||||||||    
T  10450078 attttaaaatacgggtacggggcgggtaacagggatatatgtacccaccccgaactcatacccaaac 10450144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 256
Target Start/End: Complemental strand, 13798324 - 13798210
Alignment:
Q  142 gtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaa 241  Q
    |||||||||||  | ||||| |||||||||||| || |   |||||  |||||||  || ||||||| ||  |||||| |||| | | ||||||||||||    
T  13798324 gtttgggtttttcccgatttcaaaacacgggtatgagatgggtaacgaggatatatttatccaccccaaattcatacctaaacccatcctaaatgtagaa 13798225  T
Q  242 aatcaatttattacc 256  Q
    |||||||||||||||    
T  13798224 aatcaatttattacc 13798210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 224
Target Start/End: Original strand, 35069892 - 35069974
Alignment:
Q  142 gtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaac 224  Q
    ||||| |||||| | ||||| | || |||||||| | ||  ||||| |||||||| ||||||||||||||||||||| |||||    
T  35069892 gtttgagttttccccgatttcataatacgggtacaagacgggtaacagggatatatgtacccaccccgaacccatactcaaac 35069974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 256
Target Start/End: Original strand, 41477003 - 41477069
Alignment:
Q  190 ggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaatcaatttattacc 256  Q
    ||||||| |||||||||||||| |||||||||||| ||| |  || | ||||||||||||| |||||    
T  41477003 ggatatatgtacccaccccgaatccatacccaaacccgtcccgaaagcagaaaatcaatttgttacc 41477069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 252
Target Start/End: Original strand, 43513033 - 43513142
Alignment:
Q  142 gtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaa 241  Q
    ||||| |||||||| ||||| |||||||||||| ||||||||||||  ||||||||  ||  ||| | ||| ||||| ||||| ||||   |||||| ||    
T  43513033 gtttgagttttctccgattt-aaaacacgggtatgaaacaagtaacatggatatagacactaacctcaaactcatactcaaacccgtttcgaatgtaaaa 43513131  T
Q  242 aatcaatttat 252  Q
    |||||||||||    
T  43513132 aatcaatttat 43513142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 221
Target Start/End: Original strand, 45866185 - 45866267
Alignment:
Q  139 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccataccca 221  Q
    ||||| ||||||||| | ||||| |||||||||||| || ||| ||||   | ||||||||||||||||| ||| ||||||||    
T  45866185 tgggtatgggttttccccgatttcaaaacacgggtatgagacaggtaatgagtatataggtacccaccccaaactcataccca 45866267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 137 - 218
Target Start/End: Original strand, 3627983 - 3628064
Alignment:
Q  137 actgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatac 218  Q
    ||||||| | ||||||| | ||||| |||||||||||| |  ||  ||||| || || ||||||||||||||||||||||||    
T  3627983 actgggtataggttttccccgatttcaaaacacgggtatgggacgggtaacgggtatgtaggtacccaccccgaacccatac 3628064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 139 - 244
Target Start/End: Complemental strand, 16409031 - 16408926
Alignment:
Q  139 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgta 238  Q
    ||||| ||||||||| |  |||| |||||||||||| |  ||  ||||| || ||||||||||| |||||||||||||| | |||| || || |||||||    
T  16409031 tgggtatgggttttccccaatttcaaaacacgggtatgggacgggtaacaggtatataggtaccgaccccgaacccatagctaaacccgctccaaatgta 16408932  T
Q  239 gaaaat 244  Q
     |||||    
T  16408931 aaaaat 16408926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 139 - 244
Target Start/End: Original strand, 18354080 - 18354185
Alignment:
Q  139 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgta 238  Q
    ||||| ||||||||| | ||||| |||||| ||||| |  ||  ||||| || ||||| || ||||||||||||| ||||||| |||||| | |||||||    
T  18354080 tgggtatgggttttccccgatttcaaaacatgggtatgggacgggtaacgggtatataagttcccaccccgaaccgatacccatactcgtcccaaatgta 18354179  T
Q  239 gaaaat 244  Q
     |||||    
T  18354180 aaaaat 18354185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 92 - 149
Target Start/End: Complemental strand, 20774714 - 20774657
Alignment:
Q  92 tacccgcccaaaccaatcccaatttgacggatttccttcgcttttactgggtttgggt 149  Q
    ||||||||| |||||| ||||||||||||||||| |  || ||| |||||||||||||    
T  20774714 tacccgcccgaaccaaacccaatttgacggattttccccgttttgactgggtttgggt 20774657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 89 - 121
Target Start/End: Original strand, 10450015 - 10450047
Alignment:
Q  89 gggtacccgcccaaaccaatcccaatttgacgg 121  Q
    ||||||||||||||||||| |||||||||||||    
T  10450015 gggtacccgcccaaaccaaccccaatttgacgg 10450047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 192 - 244
Target Start/End: Complemental strand, 13390449 - 13390397
Alignment:
Q  192 atataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaat 244  Q
    ||||||||||||||||||||| |||||||| || ||| | ||||||| |||||    
T  13390449 atataggtacccaccccgaactcatacccatacccgtcccaaatgtaaaaaat 13390397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 102 - 224
Target Start/End: Original strand, 16433130 - 16433249
Alignment:
Q  102 aaccaatcccaatttgacggatttccttcgcttttactgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtac 201  Q
    |||||| | ||||||||||||||| |  |  ||| | |||||||| |||||||| ||||| |||||||||||| |  ||  ||||| |  ||||||||||    
T  16433130 aaccaaactcaatttgacggattttccccattttgattgggtttgagttttctccgatttcaaaacacgggtatgggacgggtaacggatatataggtac 16433229  T
Q  202 ccaccccgaacccatacccaaac 224  Q
       ||||||||||||||||||||    
T  16433230 ---ccccgaacccatacccaaac 16433249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 243
Target Start/End: Complemental strand, 23966918 - 23966858
Alignment:
Q  183 gtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaa 243  Q
    ||||| || ||||||||||||||||||||||||||| || || ||| | ||||||| ||||    
T  23966918 gtaacgggtatataggtacccaccccgaacccatactcatacccgtcccaaatgtaaaaaa 23966858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 249
Target Start/End: Original strand, 25154845 - 25154937
Alignment:
Q  157 gattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaatcaatt 249  Q
    ||||| |||||||| |||||  || |||||  |||||||| ||||||||  ||||| ||| ||||||| ||| || ||| |||||||||||||    
T  25154845 gatttcaaaacacgagtacgggacgagtaatggggatataagtacccacttcgaactcatgcccaaacccgtcctgaatttagaaaatcaatt 25154937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 76; Significance: 3e-35; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 85 - 256
Target Start/End: Complemental strand, 32960002 - 32959832
Alignment:
Q  85 atgcgggtacccgcccaaaccaatcccaatttgacggatttccttcgcttttactgggtttgggttttctctgattttaaaacacgggtacgaaacaagt 184  Q
    |||||||||||| ||| || ||| || |||||||||||||| | ||| ||| | ||||||||||||||| || |||| |||||||||||||| |||  ||    
T  32960002 atgcgggtacccacccgaatcaaacctaatttgacggattttcctcgttttgattgggtttgggttttccctaatttcaaaacacgggtacggaacgggt 32959903  T
Q  185 aactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaatcaatttattacc 256  Q
    ||| |||||||||||| |||||||||||||||| |||||  |||  ||||||||||||||||||||||||||    
T  32959902 aacggggatataggtatccaccccgaacccata-ccaaatccgtcataaatgtagaaaatcaatttattacc 32959832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 98 - 255
Target Start/End: Original strand, 8320754 - 8320911
Alignment:
Q  98 cccaaaccaatcccaatttgacggatttccttcgcttttactgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatatag 197  Q
    ||||||||||||  |||||||||||||| |  |||||| ||| ||||||||||||| |  |||| |||||||||||||| |||| ||||| |||||||||    
T  8320754 cccaaaccaatcttaatttgacggattttccccgctttgactaggtttgggttttccccaatttcaaaacacgggtacggaacaggtaacagggatatag 8320853  T
Q  198 gtacccaccccgaacccatacccaaactcgttctaaatgtagaaaatcaatttattac 255  Q
     || | |||||||||||||||||| || |||||| |||| | |||||||| |||||||    
T  8320854 atatcgaccccgaacccatacccagacccgttctgaatgcaaaaaatcaacttattac 8320911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 90 - 226
Target Start/End: Original strand, 29199836 - 29199972
Alignment:
Q  90 ggtacccgcccaaaccaatcccaatttgacggatttccttcgcttttactgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactg 189  Q
    |||||||||||||||||| ||| ||||||||||||| |  || ||| | ||||||||| ||||| | ||||| |||| |||||||||  ||  ||||| |    
T  29199836 ggtacccgcccaaaccaaccccgatttgacggattttccccgatttgattgggtttggattttccccgatttcaaaatacgggtacgggacgggtaacag 29199935  T
Q  190 ggatataggtacccaccccgaacccatacccaaactc 226  Q
    ||||||| ||| | |||||||||||||||||||||||    
T  29199936 ggatatatgtatctaccccgaacccatacccaaactc 29199972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 142 - 256
Target Start/End: Original strand, 256495 - 256609
Alignment:
Q  142 gtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaa 241  Q
    ||||| |||||| | ||||| |||||| |||||||| ||  ||||  || ||||||||||||||||| ||||||||||||||| | | ||||||||||||    
T  256495 gtttgagttttccccgatttcaaaacatgggtacgagacgggtaatgggcatataggtacccaccccaaacccatacccaaacccctcctaaatgtagaa 256594  T
Q  242 aatcaatttattacc 256  Q
    |||||||||| ||||    
T  256595 aatcaatttactacc 256609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 142 - 255
Target Start/End: Complemental strand, 20349149 - 20349036
Alignment:
Q  142 gtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaa 241  Q
    |||||| ||||| | ||||| |||||||||||| |  || |||||| |||||||||||||||||||||||| ||||||||||  ||||  ||||||| ||    
T  20349149 gtttggattttccccgatttcaaaacacgggtatgggacgagtaacggggatataggtacccaccccgaactcatacccaaatccgttgcaaatgtaaaa 20349050  T
Q  242 aatcaatttattac 255  Q
    ||| ||||||||||    
T  20349049 aattaatttattac 20349036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 139 - 223
Target Start/End: Original strand, 28079696 - 28079780
Alignment:
Q  139 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaa 223  Q
    ||||||||||||||| | ||||| |||||| |||||||  ||  ||||| |||||||||||||||||||||||||||||||||||    
T  28079696 tgggtttgggttttccccgatttcaaaacatgggtacgggacgggtaacggggatataggtacccaccccgaacccatacccaaa 28079780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 157 - 255
Target Start/End: Original strand, 34346023 - 34346121
Alignment:
Q  157 gattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaatcaatttattac 255  Q
    |||||||||| |||||| || | | |||||| ||||||||||||||||||||||| | |||||||||  |||||  |||||||||||| ||||||||||    
T  34346023 gattttaaaatacgggttcggagcgagtaacggggatataggtacccaccccgaatctatacccaaatccgttccgaatgtagaaaattaatttattac 34346121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 88 - 256
Target Start/End: Complemental strand, 9402727 - 9402560
Alignment:
Q  88 cgggtacccgcccaaaccaatcccaatttgacggatttccttcgcttttactgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaac 187  Q
    ||||||||||||| |||||| |||||||||| |||||| |  |||||| ||||| ||||||||||| | ||||| |||||| ||||||   ||  |||||    
T  9402727 cgggtacccgcccgaaccaaacccaatttgatggattttccccgctttgactggatttgggttttccccgatttcaaaacatgggtacaggacgggtaac 9402628  T
Q  188 tgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaatcaatttattacc 256  Q
      ||||||||||  ||| ||||||||||||| |||||  ||    ||||||||||||||||||| ||||    
T  9402627 atggatataggtgtcca-cccgaacccatactcaaacctgtctcgaatgtagaaaatcaatttagtacc 9402560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 92 - 224
Target Start/End: Original strand, 14410809 - 14410940
Alignment:
Q  92 tacccgcccaaaccaatcccaatttgacggatttccttcgcttttactgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactggg 191  Q
    |||||| |||||||||  | |||||||||||||| |  || ||| ||| |||||| |||||| | ||||| |||||||||||| |  ||  ||||| ||     
T  14410809 tacccgtccaaaccaaatctaatttgacggattttcc-cgttttgactaggtttgagttttcccagatttcaaaacacgggtatgggacgggtaacgggt 14410907  T
Q  192 atataggtacccaccccgaacccatacccaaac 224  Q
    |||||||||||||||||||||||||||||||||    
T  14410908 atataggtacccaccccgaacccatacccaaac 14410940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 192 - 255
Target Start/End: Complemental strand, 13769107 - 13769044
Alignment:
Q  192 atataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaatcaatttattac 255  Q
    |||||||||||||||| ||||||||| |||||| ||| || |||||||||||||||||||||||    
T  13769107 atataggtacccacccagaacccatatccaaacccgtcctgaatgtagaaaatcaatttattac 13769044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 139 - 244
Target Start/End: Complemental strand, 12309660 - 12309555
Alignment:
Q  139 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgta 238  Q
    ||||| ||||| ||| ||||||| |||||||||||| | |||  ||||| || ||||| |||||||||||||||| |||||||||| ||| | |||||||    
T  12309660 tgggtatgggtattccctgatttcaaaacacgggtatggaacgggtaacaggtatatatgtacccaccccgaaccgatacccaaacccgtcccaaatgta 12309561  T
Q  239 gaaaat 244  Q
     |||||    
T  12309560 aaaaat 12309555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 139 - 244
Target Start/End: Complemental strand, 32853932 - 32853827
Alignment:
Q  139 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgta 238  Q
    ||||| ||||||||| | ||| | |||||||||||| |  ||  ||||| || ||||||||||||||||||||||||||||||||| ||| | |||||||    
T  32853932 tgggtatgggttttccccgatctcaaaacacgggtatgggacgggtaacgggtatataggtacccaccccgaacccatacccaaacccgtcccaaatgta 32853833  T
Q  239 gaaaat 244  Q
     |||||    
T  32853832 aaaaat 32853827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 188 - 256
Target Start/End: Original strand, 1947840 - 1947908
Alignment:
Q  188 tgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaatcaatttattacc 256  Q
    ||||||||| |||| || | | ||||||||| ||||||||||| |||||||||||||||||||||||||    
T  1947840 tgggatatatgtactcatctcaaacccatactcaaactcgttccaaatgtagaaaatcaatttattacc 1947908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 137 - 224
Target Start/End: Original strand, 24602854 - 24602941
Alignment:
Q  137 actgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaac 224  Q
    ||||||||||||||||| | ||||| |||||| ||||| |  ||  ||||| || |||||| ||||||||||||||||||||||||||    
T  24602854 actgggtttgggttttcccagatttcaaaacatgggtatgtgacgggtaacaggtatatagatacccaccccgaacccatacccaaac 24602941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 145 - 238
Target Start/End: Complemental strand, 15498406 - 15498313
Alignment:
Q  145 tgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgta 238  Q
    ||||||||| | ||||| |||||||||||| || ||| ||||  || ||||||||||||| |||||||||| |||||||| ||| | |||||||    
T  15498406 tgggttttccccgatttcaaaacacgggtatgagacaggtaatgggtatataggtacccatcccgaacccacacccaaacccgtcccaaatgta 15498313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 139 - 244
Target Start/End: Complemental strand, 27738860 - 27738755
Alignment:
Q  139 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgta 238  Q
    ||||| ||||||||| | ||||| |||||||||||| |  ||  ||||| |  ||||| ||||||||||||||||||||||||||| ||| | |||||||    
T  27738860 tgggtatgggttttccccgatttcaaaacacgggtatgggacgggtaacagatatatatgtacccaccccgaacccatacccaaacccgtcccaaatgta 27738761  T
Q  239 gaaaat 244  Q
     |||||    
T  27738760 aaaaat 27738755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 183 - 243
Target Start/End: Original strand, 3483967 - 3484027
Alignment:
Q  183 gtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaa 243  Q
    ||||| || ||||||||||||||||||||||||||||||||| ||| | ||||||| ||||    
T  3483967 gtaacgggtatataggtacccaccccgaacccatacccaaacccgtcccaaatgtaaaaaa 3484027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 139 - 243
Target Start/End: Original strand, 5863383 - 5863487
Alignment:
Q  139 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgta 238  Q
    ||||| ||||||||| | ||||| |||||||||||| |  ||  ||||| || |||||| |||||||| ||||||||||||||||| ||| | |||||||    
T  5863383 tgggtatgggttttccccgatttcaaaacacgggtatgggacgggtaacgggtatatagatacccacctcgaacccatacccaaacccgtcccaaatgta 5863482  T
Q  239 gaaaa 243  Q
     ||||    
T  5863483 aaaaa 5863487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 192 - 244
Target Start/End: Complemental strand, 12141420 - 12141368
Alignment:
Q  192 atataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaat 244  Q
    ||||||||||||||||||||||||||||||||| ||| | ||||||| |||||    
T  12141420 atataggtacccaccccgaacccatacccaaacccgtcccaaatgtaaaaaat 12141368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 139 - 224
Target Start/End: Complemental strand, 2367414 - 2367329
Alignment:
Q  139 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaac 224  Q
    ||||| ||||||||| | ||| | |||||||||||| |  ||  ||||| || ||||| |||||||||||||||||||||||||||    
T  2367414 tgggtatgggttttccccgatctcaaaacacgggtatgggacgggtaacgggtatataagtacccaccccgaacccatacccaaac 2367329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 139 - 224
Target Start/End: Original strand, 10142518 - 10142603
Alignment:
Q  139 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaac 224  Q
    ||||| ||||||||| | ||| | |||| ||||||| |  ||| ||||| || ||||||||||||||||||||| |||||||||||    
T  10142518 tgggtatgggttttccccgatctcaaaaaacgggtatgggacaggtaacgggtatataggtacccaccccgaactcatacccaaac 10142603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 183 - 244
Target Start/End: Complemental strand, 24225742 - 24225681
Alignment:
Q  183 gtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaat 244  Q
    ||||| || ||||||||||||||||||||||||| ||||||| ||| | ||||||| |||||    
T  24225742 gtaacgggtatataggtacccaccccgaacccatgcccaaacccgtcccaaatgtaaaaaat 24225681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 139 - 208
Target Start/End: Original strand, 34178329 - 34178398
Alignment:
Q  139 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccacccc 208  Q
    ||||| ||||||| | ||||||| ||||||||||||||| ||  |||||  |||||||||||||||||||    
T  34178329 tgggtatgggtttcccctgatttcaaaacacgggtacgagacgggtaacaaggatataggtacccacccc 34178398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 192 - 224
Target Start/End: Original strand, 10188126 - 10188158
Alignment:
Q  192 atataggtacccaccccgaacccatacccaaac 224  Q
    |||||||||||||||||||||||||||||||||    
T  10188126 atataggtacccaccccgaacccatacccaaac 10188158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 183 - 243
Target Start/End: Complemental strand, 27534728 - 27534668
Alignment:
Q  183 gtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaa 243  Q
    ||||| || |||||||||||||||||||| |||||||||||| ||| | ||||||| ||||    
T  27534728 gtaacgggtatataggtacccaccccgaatccatacccaaacccgtcccaaatgtaaaaaa 27534668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 145 - 244
Target Start/End: Complemental strand, 32532622 - 32532523
Alignment:
Q  145 tgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaat 244  Q
    ||||||||| | ||||| |||||||||||| |  ||  ||||  || ||||||||||||||||||||||||||| || || ||| | ||||||| |||||    
T  32532622 tgggttttccccgatttcaaaacacgggtatgggacgggtaatgggtatataggtacccaccccgaacccatactcatacccgtcccaaatgtaaaaaat 32532523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 139 - 228
Target Start/End: Complemental strand, 14255045 - 14254957
Alignment:
Q  139 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgt 228  Q
    |||||||| |||||||||||||| ||| |||||||| |  ||  ||||| |  |||||||||||||||  ||||||||||||||| ||||    
T  14255045 tgggtttgagttttctctgatttcaaa-cacgggtatgggacgtgtaacggaaatataggtacccaccatgaacccatacccaaattcgt 14254957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 226
Target Start/End: Original strand, 7393858 - 7393974
Alignment:
Q  110 ccaatttgacggatttccttcgcttttactgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccg 209  Q
    |||||||||||||||| |  |  ||| | ||||||||| ||||| | ||||| |||||||| ||| || ||   |||  || ||||||||| ||||||||    
T  7393858 ccaatttgacggattttccccattttgattgggtttggattttccccgatttcaaaacacgagtaagagacggataatgggtatataggtatccaccccg 7393957  T
Q  210 aacccatacccaaactc 226  Q
    ||||||||| |||||||    
T  7393958 aacccatactcaaactc 7393974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 192 - 224
Target Start/End: Original strand, 12678147 - 12678179
Alignment:
Q  192 atataggtacccaccccgaacccatacccaaac 224  Q
    |||||||||||||||| ||||||||||||||||    
T  12678147 atataggtacccaccctgaacccatacccaaac 12678179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 246
Target Start/End: Complemental strand, 29341341 - 29341237
Alignment:
Q  142 gtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaa 241  Q
    |||||||||||  | |||||| ||||| ||| | || ||  ||||| | |||||||||||||| ||| ||| ||||||||||| ||| |  |||||||||    
T  29341341 gtttgggtttttcccgattttcaaacatgggcatgagacgggtaacggagatataggtacccatcccaaactcatacccaaacccgtcccgaatgtagaa 29341242  T
Q  242 aatca 246  Q
    |||||    
T  29341241 aatca 29341237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 243
Target Start/End: Complemental strand, 32053132 - 32053072
Alignment:
Q  183 gtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaa 243  Q
    ||||| || ||||| ||||||||||| ||||||||||||||| ||| | ||||||| ||||    
T  32053132 gtaacgggtatatatgtacccaccccaaacccatacccaaacccgtccaaaatgtaaaaaa 32053072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 75; Significance: 1e-34; HSPs: 54)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 142 - 256
Target Start/End: Original strand, 21956818 - 21956932
Alignment:
Q  142 gtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaa 241  Q
    ||||||||||| || |||||||||||||||||||| ||  |||||| ||||||||||| |||||||||||||||||||||||||||||   |||||||||    
T  21956818 gtttgggttttttccgattttaaaacacgggtacggaatgagtaacggggatataggtgcccaccccgaacccatacccaaactcgttacgaatgtagaa 21956917  T
Q  242 aatcaatttattacc 256  Q
    |||||||||||||||    
T  21956918 aatcaatttattacc 21956932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 139 - 226
Target Start/End: Original strand, 14605926 - 14606013
Alignment:
Q  139 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactc 226  Q
    ||||||||||||||||| ||||| |||| |||||||||| ||  ||||| |||||||| |||||||||||||||||||||||||||||    
T  14605926 tgggtttgggttttctccgatttcaaaatacgggtacgagacgggtaacagggatatatgtacccaccccgaacccatacccaaactc 14606013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 89 - 224
Target Start/End: Complemental strand, 29527956 - 29527821
Alignment:
Q  89 gggtacccgcccaaaccaatcccaatttgacggatttccttcgcttttactgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaact 188  Q
    |||||||||||||||||||   | ||||||||| ||| |  |||||| |  |||||||||||||| | ||||| |||| |||||||||  ||  |||||     
T  29527956 gggtacccgcccaaaccaacttcgatttgacgggttttccccgctttgatagggtttgggttttccccgatttcaaaatacgggtacgtgacgggtaacg 29527857  T
Q  189 gggatataggtacccaccccgaacccatacccaaac 224  Q
    |||||||| |||||||||||||||||||||||||||    
T  29527856 gggatatatgtacccaccccgaacccatacccaaac 29527821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 89 - 224
Target Start/End: Original strand, 30266281 - 30266416
Alignment:
Q  89 gggtacccgcccaaaccaatcccaatttgacggatttccttcgcttttactgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaact 188  Q
    ||||||||||||||||||| ||| ||||||||| ||| || || ||| ||||||||||| |||| || ||||| | || ||||||||   ||  |||||     
T  30266281 gggtacccgcccaaaccaaccccgatttgacgggttttctccgatttgactgggtttggtttttttccgatttcataatacgggtacaggacgggtaacg 30266380  T
Q  189 gggatataggtacccaccccgaacccatacccaaac 224  Q
    |||||||| ||| |||||||||||||||||||||||    
T  30266381 gggatatatgtatccaccccgaacccatacccaaac 30266416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 89 - 224
Target Start/End: Complemental strand, 30285907 - 30285772
Alignment:
Q  89 gggtacccgcccaaaccaatcccaatttgacggatttccttcgcttttactgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaact 188  Q
    ||||||||||||||||||| ||| ||||||||| ||| || || ||| ||||||||||| |||| || ||||| | || ||||||||   ||  |||||     
T  30285907 gggtacccgcccaaaccaaccccgatttgacgggttttctccgatttgactgggtttggtttttttccgatttcataatacgggtacaggacgggtaacg 30285808  T
Q  189 gggatataggtacccaccccgaacccatacccaaac 224  Q
    |||||||| ||| |||||||||||||||||||||||    
T  30285807 gggatatatgtatccaccccgaacccatacccaaac 30285772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 148 - 251
Target Start/End: Complemental strand, 42907971 - 42907868
Alignment:
Q  148 gttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaatcaa 247  Q
    |||||||| || || ||||||||| ||||  || |||||  |||||||||||||||||||||| ||||||||||||||||| |  |||||||||||||||    
T  42907971 gttttctccgaattcaaaacacggatacgggacgagtaatggggatataggtacccaccccgagcccatacccaaactcgtcccgaatgtagaaaatcaa 42907872  T
Q  248 ttta 251  Q
    ||||    
T  42907871 ttta 42907868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 142 - 251
Target Start/End: Original strand, 19883060 - 19883169
Alignment:
Q  142 gtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaa 241  Q
    |||||||||||| | ||||||||||||||| ||||  |   ||||| |||||||||||| |||||||||||| |||| ||||||||| |  |||||| ||    
T  19883060 gtttgggttttccccgattttaaaacacggatacgggaagggtaacggggatataggtatccaccccgaaccgatacacaaactcgtcccgaatgtataa 19883159  T
Q  242 aatcaattta 251  Q
    ||||||||||    
T  19883160 aatcaattta 19883169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 111 - 252
Target Start/End: Original strand, 25298806 - 25298947
Alignment:
Q  111 caatttgacggatttccttcgcttttactgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccga 210  Q
    |||||||||||||||    | |||| ||||||||||||||||  | ||||| ||||||||||||||  |   ||||  ||||||||| |  |||||||||    
T  25298806 caatttgacggatttttcccactttgactgggtttgggtttttccggatttcaaaacacgggtacgggatgggtaatggggatatagctgtccaccccga 25298905  T
Q  211 acccatacccaaactcgttctaaatgtagaaaatcaatttat 252  Q
    |||||||||||||| ||| | |||||| ||||||||||||||    
T  25298906 acccatacccaaacccgtaccaaatgttgaaaatcaatttat 25298947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 139 - 243
Target Start/End: Original strand, 6382273 - 6382377
Alignment:
Q  139 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgta 238  Q
    ||||| ||||||||||| ||| | |||||||||||| |  ||  ||||| || ||||||||||||||||||||||||||||||||| ||| | |||||||    
T  6382273 tgggtatgggttttctccgatctcaaaacacgggtatgggacgggtaacgggtatataggtacccaccccgaacccatacccaaacccgtcccaaatgta 6382372  T
Q  239 gaaaa 243  Q
     ||||    
T  6382373 aaaaa 6382377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 137 - 224
Target Start/End: Complemental strand, 31782709 - 31782622
Alignment:
Q  137 actgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaac 224  Q
    ||||||||||||||||| | ||||| |||| |||||||||  ||| ||||| |||||||| ||||||||||| ||| |||||||||||    
T  31782709 actgggtttgggttttccccgatttcaaaatacgggtacggtacaggtaacggggatatatgtacccaccccaaactcatacccaaac 31782622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 190 - 256
Target Start/End: Original strand, 9929219 - 9929285
Alignment:
Q  190 ggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaatcaatttattacc 256  Q
    ||||||||||||||||||||||| | |||||||| |||| || || |||||||||||||||||||||    
T  9929219 ggatataggtacccaccccgaactcttacccaaaatcgtcctgaaagtagaaaatcaatttattacc 9929285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 142 - 224
Target Start/End: Complemental strand, 25941229 - 25941147
Alignment:
Q  142 gtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaac 224  Q
    |||||||||||  | ||||| ||||||||||||||  ||| ||||| || | |||||||||||||||||||||||||||||||    
T  25941229 gtttgggtttttcccgatttcaaaacacgggtacgggacaggtaacgggaagataggtacccaccccgaacccatacccaaac 25941147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 95 - 238
Target Start/End: Complemental strand, 32585633 - 32585484
Alignment:
Q  95 ccgcccaaaccaatcccaatttgacggatttccttcgcttttactgggtttgggt------tttctctgattttaaaacacgggtacgaaacaagtaact 188  Q
    ||||||||||||| ||||||||||| | ||| |  |  ||| |||||||||||||      |||||| ||||| |||||||||||| |  ||| |||||     
T  32585633 ccgcccaaaccaaacccaatttgaccggttttcccctttttgactgggtttgggtatgaattttctccgatttcaaaacacgggtatgggacaggtaacg 32585534  T
Q  189 gggatataggtacccaccccgaacccatacccaaactcgttctaaatgta 238  Q
    || |||||||||||||||| |||||||||||||||| ||| | |||||||    
T  32585533 ggtatataggtacccaccctgaacccatacccaaacccgtcccaaatgta 32585484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 139 - 256
Target Start/End: Original strand, 35304517 - 35304635
Alignment:
Q  139 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttcta-aatgt 237  Q
    |||||||||||||||||| |||||||||||   |||||  ||  ||||| |||||||||||||| ||||| ||| ||||||||||||| |   | |||||    
T  35304517 tgggtttgggttttctctaattttaaaacataagtacgggacgggtaacggggatataggtacctaccccaaactcatacccaaactcatcaaagaatgt 35304616  T
Q  238 agaaaatcaatttattacc 256  Q
    || ||||||||||||||||    
T  35304617 aggaaatcaatttattacc 35304635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 156 - 254
Target Start/End: Complemental strand, 37926636 - 37926538
Alignment:
Q  156 tgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaatcaatttatta 254  Q
    ||||||||||||| |||||| | ||||||||| |||||||| ||||||   | |||||||||||||||||| | || ||||||| |||| |||||||||    
T  37926636 tgattttaaaacatgggtaccagacaagtaacagggatataagtacccggtctgaacccatacccaaactcatcctgaatgtagtaaattaatttatta 37926538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 139 - 244
Target Start/End: Complemental strand, 31752550 - 31752445
Alignment:
Q  139 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgta 238  Q
    ||||| ||||||||| | ||||| |||||||||||| || || ||||||  | |||||||| ||||||||||||||||||||| || ||| | |||||||    
T  31752550 tgggtatgggttttccccgatttcaaaacacgggtatgagacgagtaacgagtatataggttcccaccccgaacccatacccatacccgtcccaaatgta 31752451  T
Q  239 gaaaat 244  Q
     |||||    
T  31752450 aaaaat 31752445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 163 - 256
Target Start/End: Original strand, 33516097 - 33516190
Alignment:
Q  163 aaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaatcaatttattacc 256  Q
    ||||||||||||||| |   ||||| |||||||| |||||||||||||||| |||||||||| |||   ||||||| ||||||||| |||||||    
T  33516097 aaaacacgggtacgagatgggtaacagggatataagtacccaccccgaacctatacccaaacccgtctcaaatgtaaaaaatcaatgtattacc 33516190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 89 - 224
Target Start/End: Original strand, 10574370 - 10574505
Alignment:
Q  89 gggtacccgcccaaaccaatcccaatttgacggatttccttcgcttttactgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaact 188  Q
    ||||||||||||||| ||||||| ||||||||| ||| |  || ||| ||||||||||  ||||| | ||||| | || || ||||||  ||  |||||     
T  10574370 gggtacccgcccaaatcaatcccgatttgacgggttttccccgatttgactgggtttgaattttccccgatttcataatacaggtacgggacgggtaacg 10574469  T
Q  189 gggatataggtacccaccccgaacccatacccaaac 224  Q
    |||||||| |||||| |||||||| |||||||||||    
T  10574470 gggatatatgtacccgccccgaactcatacccaaac 10574505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 158 - 256
Target Start/End: Original strand, 12075651 - 12075749
Alignment:
Q  158 attttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaatcaatttattacc 256  Q
    |||| ||||||||||||||  ||| ||||  |||| ||| ||||||||||| ||| | ||| ||||||||| |  ||||||||||||||||||||||||    
T  12075651 atttcaaaacacgggtacgtgacaggtaatagggagatatgtacccaccccaaactcgtactcaaactcgtccggaatgtagaaaatcaatttattacc 12075749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 190 - 256
Target Start/End: Complemental strand, 16575155 - 16575089
Alignment:
Q  190 ggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaatcaatttattacc 256  Q
    ||||||| |||||||| ||||||| ||||||||||||||  |||||||| ||||| |||||||||||    
T  16575155 ggatataagtacccactccgaacctatacccaaactcgtcttaaatgtaaaaaattaatttattacc 16575089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 139 - 224
Target Start/End: Original strand, 1724311 - 1724396
Alignment:
Q  139 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaac 224  Q
    ||||||||||||||| | ||||| |||||| ||||| |  ||  ||||| |  |||||||||||||||||||||||||||||||||    
T  1724311 tgggtttgggttttccccgatttcaaaacatgggtatgggacgggtaacggttatataggtacccaccccgaacccatacccaaac 1724396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 139 - 224
Target Start/End: Original strand, 6482036 - 6482121
Alignment:
Q  139 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaac 224  Q
    ||||||||||||||| |  |||| |||||||||||| |  || |||||  || ||||| |||||||||||||||||||||||||||    
T  6482036 tgggtttgggttttccccaatttaaaaacacgggtatgggacgagtaaagggtatatatgtacccaccccgaacccatacccaaac 6482121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 139 - 224
Target Start/End: Complemental strand, 21544673 - 21544588
Alignment:
Q  139 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaac 224  Q
    ||||||||| ||||  | ||||| |||| |||||||||  ||| ||||  |||||||| |||||||||||||||||||||||||||    
T  21544673 tgggtttggatttttcccgatttcaaaatacgggtacgggacaggtaatggggatatatgtacccaccccgaacccatacccaaac 21544588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 143 - 256
Target Start/End: Complemental strand, 36306875 - 36306762
Alignment:
Q  143 tttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaa 242  Q
    ||||| ||||||| ||||| |||||||||||| || ||   |||| |||||||||||||| | |||||| | | || ||||| ||| |  ||||||||||    
T  36306875 tttggattttctccgatttcaaaacacgggtatgagacggttaacggggatataggtacctaacccgaagctacactcaaacccgtcccgaatgtagaaa 36306776  T
Q  243 atcaatttattacc 256  Q
    ||||||||||||||    
T  36306775 atcaatttattacc 36306762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 183 - 244
Target Start/End: Original strand, 47550398 - 47550459
Alignment:
Q  183 gtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaat 244  Q
    ||||| || ||||||||||||||||||||||||||||||||| ||| | ||||||| |||||    
T  47550398 gtaacaggtatataggtacccaccccgaacccatacccaaacccgtcccaaatgtaaaaaat 47550459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 183 - 243
Target Start/End: Original strand, 5902659 - 5902719
Alignment:
Q  183 gtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaa 243  Q
    ||||| || ||||||||||||||||||||||||||||||||| ||| | ||||||| ||||    
T  5902659 gtaacgggtatataggtacccaccccgaacccatacccaaacccgtcccaaatgtaaaaaa 5902719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 183 - 243
Target Start/End: Complemental strand, 7609020 - 7608960
Alignment:
Q  183 gtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaa 243  Q
    ||||| || ||||||||||||||||||||||||||||||||| ||| | ||||||| ||||    
T  7609020 gtaacgggtatataggtacccaccccgaacccatacccaaacccgtcccaaatgtaaaaaa 7608960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 139 - 243
Target Start/End: Original strand, 11122870 - 11122974
Alignment:
Q  139 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgta 238  Q
    ||||| ||||||||||| ||| |  ||||||||||| |  ||  ||||| || ||||||||||||||||||||||||||| ||||| ||| | |||||||    
T  11122870 tgggtatgggttttctccgatctcgaaacacgggtatgggacgggtaacgggtatataggtacccaccccgaacccatactcaaacccgtcccaaatgta 11122969  T
Q  239 gaaaa 243  Q
     ||||    
T  11122970 aaaaa 11122974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 183 - 243
Target Start/End: Complemental strand, 44317585 - 44317525
Alignment:
Q  183 gtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaa 243  Q
    ||||| || ||||||||||||||||||||||||||||||||| ||| | ||||||| ||||    
T  44317585 gtaacgggtatataggtacccaccccgaacccatacccaaacccgtcccaaatgtaaaaaa 44317525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 145 - 221
Target Start/End: Complemental strand, 48459569 - 48459493
Alignment:
Q  145 tgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccataccca 221  Q
    ||||||||| | ||||| |||||| ||||| | |||  ||||| || ||||||||||||||||||||||||||||||    
T  48459569 tgggttttccccgatttcaaaacatgggtatggaacgggtaacaggtatataggtacccaccccgaacccataccca 48459493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 148 - 202
Target Start/End: Complemental strand, 3516402 - 3516348
Alignment:
Q  148 gttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacc 202  Q
    |||||||| ||||| |||||||||||||||||| |||||| | ||||||||||||    
T  3516402 gttttctccgatttcaaaacacgggtacgaaacgagtaacagtgatataggtacc 3516348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 192 - 254
Target Start/End: Original strand, 9280943 - 9281005
Alignment:
Q  192 atataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaatcaatttatta 254  Q
    ||||||||||||||||||||| ||||| |||||| || || ||| |||||||| |||||||||    
T  9280943 atataggtacccaccccgaactcatactcaaacttgtcctgaatatagaaaataaatttatta 9281005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 190 - 256
Target Start/End: Complemental strand, 36919166 - 36919100
Alignment:
Q  190 ggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaatcaatttattacc 256  Q
    ||||||||||| ||| ||  |||||||||||||||||||||   ||||||||||||| |||||||||    
T  36919166 ggatataggtatccatccttaacccatacccaaactcgttccggatgtagaaaatcagtttattacc 36919100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 139 - 224
Target Start/End: Complemental strand, 11028167 - 11028082
Alignment:
Q  139 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaac 224  Q
    ||||| ||||||||| | ||| | |||||||||||| |  ||  ||||| || ||||||||||||||||||||| |||||||||||    
T  11028167 tgggtatgggttttccccgatctcaaaacacgggtatgggacgggtaacgggtatataggtacccaccccgaactcatacccaaac 11028082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 139 - 224
Target Start/End: Original strand, 15987263 - 15987348
Alignment:
Q  139 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaac 224  Q
    ||||| || |||||| | |||||||||||||||||| |  |   ||||| || |||||| ||||||||||||||||||||||||||    
T  15987263 tgggtatgagttttcccagattttaaaacacgggtatgggatgggtaacgggtatatagatacccaccccgaacccatacccaaac 15987348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 139 - 224
Target Start/End: Complemental strand, 47103832 - 47103747
Alignment:
Q  139 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaac 224  Q
    ||||||||||||||| |  |||| |||| |||||||||   |  |||||  ||||||| |||||||||||||||||||||||||||    
T  47103832 tgggtttgggttttccccaatttcaaaatacgggtacggggcgggtaacgcggatatatgtacccaccccgaacccatacccaaac 47103747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 183 - 244
Target Start/End: Original strand, 53906350 - 53906411
Alignment:
Q  183 gtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaat 244  Q
    ||||| || |||||||||||||||||||||||||| | |||||||| | ||||||| |||||    
T  53906350 gtaacaggtatataggtacccaccccgaacccatatctaaactcgtcccaaatgtaaaaaat 53906411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 183 - 243
Target Start/End: Complemental strand, 26564881 - 26564821
Alignment:
Q  183 gtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaa 243  Q
    ||||| || |||||||||||||||||||| |||||||||||| ||| | ||||| ||||||    
T  26564881 gtaacgggtatataggtacccaccccgaaaccatacccaaacccgtcccaaatgcagaaaa 26564821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 183 - 243
Target Start/End: Original strand, 55826668 - 55826728
Alignment:
Q  183 gtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaa 243  Q
    ||||| || |||||||||||||||||||||||||| |||||| ||| | ||||||| ||||    
T  55826668 gtaacgggtatataggtacccaccccgaacccatatccaaacccgtcccaaatgtaaaaaa 55826728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 189 - 224
Target Start/End: Complemental strand, 568461 - 568426
Alignment:
Q  189 gggatataggtacccaccccgaacccatacccaaac 224  Q
    |||||||| |||||||||||||||||||||||||||    
T  568461 gggatatatgtacccaccccgaacccatacccaaac 568426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 189 - 256
Target Start/End: Original strand, 8843856 - 8843922
Alignment:
Q  189 gggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaatcaatttattacc 256  Q
    ||||||||| ||||||||| |||| ||||||||||| |||  | |||||||||||| |||||||||||    
T  8843856 gggatatagatacccaccc-gaactcatacccaaacccgtcgtgaatgtagaaaattaatttattacc 8843922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 189 - 256
Target Start/End: Original strand, 8856820 - 8856886
Alignment:
Q  189 gggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaatcaatttattacc 256  Q
    ||||||||| ||||||||| |||| ||||||||||| |||  | |||||||||||| |||||||||||    
T  8856820 gggatatagatacccaccc-gaactcatacccaaacccgtcgtgaatgtagaaaattaatttattacc 8856886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 164 - 243
Target Start/End: Complemental strand, 21423930 - 21423851
Alignment:
Q  164 aaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaa 243  Q
    ||||||||||| || ||  ||||| || ||||||||||||||||| ||||||||| ||||| ||| | ||||||| ||||    
T  21423930 aaacacgggtatgagacgggtaacgggtatataggtacccaccccaaacccatacacaaacccgtcccaaatgtaaaaaa 21423851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 164 - 243
Target Start/End: Original strand, 31918584 - 31918663
Alignment:
Q  164 aaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaa 243  Q
    ||||||||||| |  || |||||  || |||||| |||||||||||||||||||||||||| ||| | ||||||| ||||    
T  31918584 aaacacgggtatgggacgagtaatgggtatatagttacccaccccgaacccatacccaaacccgtcccaaatgtaaaaaa 31918663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 157 - 224
Target Start/End: Complemental strand, 45065325 - 45065258
Alignment:
Q  157 gattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaac 224  Q
    ||||| |||| |||||||||  || |||||| |||||||| ||||||| ||||||| |||||||||||    
T  45065325 gatttcaaaatacgggtacgggacgagtaacagggatatatgtacccatcccgaacgcatacccaaac 45065258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 254
Target Start/End: Original strand, 4741262 - 4741331
Alignment:
Q  184 taactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaatcaatttatta 254  Q
    |||| |||||||| |||||||||||||||||||||  |||| |||||  ||||||  ||||||||||||||    
T  4741262 taacagggatataagtacccaccccgaacccatacaaaaacccgttccgaatgta-taaatcaatttatta 4741331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 221
Target Start/End: Complemental strand, 10302178 - 10302096
Alignment:
Q  139 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccataccca 221  Q
    ||||||| ||||||| | ||||| |||  ||||||| || ||  ||||| ||| |||| ||||||||||||||||||||||||    
T  10302178 tgggtttaggttttccccgatttcaaagtacgggtatgagacgggtaacggggttatatgtacccaccccgaacccataccca 10302096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 221
Target Start/End: Original strand, 47239386 - 47239468
Alignment:
Q  139 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccataccca 221  Q
    ||||| ||| |||| || |||||||||||||||||| |  ||  ||||| || |||||||| ||||||| |||||||||||||    
T  47239386 tgggtatggattttttccgattttaaaacacgggtatgggacgggtaacgggtatataggttcccaccctgaacccataccca 47239468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 157 - 226
Target Start/End: Original strand, 1866568 - 1866637
Alignment:
Q  157 gattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactc 226  Q
    ||||| |||| |||||||||| ||  ||||   ||||||| ||| |||||||||||||||||||||||||    
T  1866568 gatttcaaaatacgggtacgagacgggtaatgcggatatatgtatccaccccgaacccatacccaaactc 1866637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 92 - 149
Target Start/End: Complemental strand, 26564984 - 26564927
Alignment:
Q  92 tacccgcccaaaccaatcccaatttgacggatttccttcgcttttactgggtttgggt 149  Q
    ||||| ||| ||||||  |||||||||||||||| ||||| ||| |||||||||||||    
T  26564984 tacccacccgaaccaaatccaatttgacggattttcttcgttttgactgggtttgggt 26564927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 139 - 244
Target Start/End: Complemental strand, 39047046 - 39046941
Alignment:
Q  139 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgta 238  Q
    ||||| ||||||||| |  ||||  ||||||||||| |  ||| ||||| || |||||||||||||| || |||||||||||| || ||| | |||||||    
T  39047046 tgggtatgggttttccccaatttccaaacacgggtatgggacatgtaacgggtatataggtacccactccaaacccatacccatacccgtcccaaatgta 39046947  T
Q  239 gaaaat 244  Q
     |||||    
T  39046946 aaaaat 39046941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 254
Target Start/End: Original strand, 4237346 - 4237410
Alignment:
Q  190 ggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaatcaatttatta 254  Q
    |||||||||||||||| |  ||| ||||| ||||||| ||  ||||||||||||| |||||||||    
T  4237346 ggatataggtacccacgcgaaacacatactcaaactcatttcaaatgtagaaaattaatttatta 4237410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 226
Target Start/End: Original strand, 23927693 - 23927729
Alignment:
Q  190 ggatataggtacccaccccgaacccatacccaaactc 226  Q
    ||||||||||| ||||||||||||| |||||||||||    
T  23927693 ggatataggtatccaccccgaacccctacccaaactc 23927729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 192 - 228
Target Start/End: Original strand, 28695196 - 28695232
Alignment:
Q  192 atataggtacccaccccgaacccatacccaaactcgt 228  Q
    |||||||||| |||||||||| |||||||||||||||    
T  28695196 atataggtactcaccccgaactcatacccaaactcgt 28695232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 70; Significance: 1e-31; HSPs: 36)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 142 - 251
Target Start/End: Original strand, 8545352 - 8545461
Alignment:
Q  142 gtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaa 241  Q
    |||||||||||||| ||||| |||||||||||| | ||| |||||| ||||||||| |||||||||||||||||||| ||||||||| | ||||||||||    
T  8545352 gtttgggttttctccgatttcaaaacacgggtatggaacgagtaacggggatatagatacccaccccgaacccatactcaaactcgtcccaaatgtagaa 8545451  T
Q  242 aatcaattta 251  Q
    ||||||||||    
T  8545452 aatcaattta 8545461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 92 - 224
Target Start/End: Complemental strand, 17469390 - 17469258
Alignment:
Q  92 tacccgcccaaaccaatcccaatttgacggatttccttcgcttttactgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactggg 191  Q
    ||||| ||| |||||| ||||||||||||||||| |  || ||| ||||||||||||||||| | ||||| |||||||||||| |  ||  ||||| ||     
T  17469390 tacccacccgaaccaaacccaatttgacggattttccccgttttgactgggtttgggttttccccgatttcaaaacacgggtatgggacgggtaacgggt 17469291  T
Q  192 atataggtacccaccccgaacccatacccaaac 224  Q
    ||||||||||||||||| |||||||||||||||    
T  17469290 atataggtacccaccccaaacccatacccaaac 17469258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 157 - 256
Target Start/End: Original strand, 27777216 - 27777315
Alignment:
Q  157 gattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaatcaatttattacc 256  Q
    ||||| ||||||| ||||||  ||| ||||| | |||| |||||||||||||||||||||||||||||||| |||| || || |||||||||||||||||    
T  27777216 gatttcaaaacacaggtacgggacaggtaacagagatacaggtacccaccccgaacccatacccaaactcgctctacatatataaaatcaatttattacc 27777315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 143 - 224
Target Start/End: Original strand, 17084111 - 17084192
Alignment:
Q  143 tttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaac 224  Q
    ||||||||||||| ||||||||||||||||||||| ||  ||||| ||||||||| |||||||||||||| |||| ||||||    
T  17084111 tttgggttttctccgattttaaaacacgggtacgagacgggtaacggggatatagatacccaccccgaactcatatccaaac 17084192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 143 - 256
Target Start/End: Original strand, 12468223 - 12468335
Alignment:
Q  143 tttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaa 242  Q
    |||||||||||   |||||  |||||||||||||| ||| |||| |||||| |||||||| ||||||||| ||||| |||| ||||||  ||||||||||    
T  12468223 tttgggttttcctcgatttcgaaacacgggtacgagacatgtaa-tgggatgtaggtaccaaccccgaactcatactcaaattcgttccgaatgtagaaa 12468321  T
Q  243 atcaatttattacc 256  Q
    ||||| ||||||||    
T  12468322 atcaacttattacc 12468335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 143 - 248
Target Start/End: Complemental strand, 14687483 - 14687378
Alignment:
Q  143 tttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaa 242  Q
    ||||||||||| | ||||| ||||||| |||| |  || || ||| |||||||| ||| ||||||||||||||||||||||||||| || ||||| ||||    
T  14687483 tttgggttttccccgatttcaaaacacaggtatgggacgagaaacagggatatatgtatccaccccgaacccatacccaaactcgtcctgaatgtggaaa 14687384  T
Q  243 atcaat 248  Q
    ||||||    
T  14687383 atcaat 14687378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 142 - 251
Target Start/End: Original strand, 30481424 - 30481533
Alignment:
Q  142 gtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaa 241  Q
    |||||||||||  ||||||| |||| ||| ||| || || |||||   ||||||||||||||||||||||||||||||||||||||| |  |||||| ||    
T  30481424 gtttgggtttttcctgatttcaaaatacgagtatgagacgagtaatgaggatataggtacccaccccgaacccatacccaaactcgtcccgaatgtaaaa 30481523  T
Q  242 aatcaattta 251  Q
    ||| ||||||    
T  30481524 aattaattta 30481533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 139 - 243
Target Start/End: Complemental strand, 24928037 - 24927933
Alignment:
Q  139 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgta 238  Q
    ||||| ||||||||| ||||| |  ||||||||||| || ||  ||||| || ||||||||||||||||||||||||||||||||| ||| | |||||||    
T  24928037 tgggtatgggttttccctgatctcgaaacacgggtatgagacgggtaacgggtatataggtacccaccccgaacccatacccaaacccgtcccaaatgta 24927938  T
Q  239 gaaaa 243  Q
     ||||    
T  24927937 aaaaa 24927933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 190 - 256
Target Start/End: Complemental strand, 28345528 - 28345462
Alignment:
Q  190 ggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaatcaatttattacc 256  Q
    ||||||||| |||||||||||||||||||||||||| || || |||||||||||| ||| |||||||    
T  28345528 ggatataggcacccaccccgaacccatacccaaacttgtcctgaatgtagaaaataaatatattacc 28345462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 139 - 224
Target Start/End: Complemental strand, 20399680 - 20399595
Alignment:
Q  139 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaac 224  Q
    ||||||||||||||||| ||||| |||||||||||| |  ||  ||||| || |||||| |||||||||||||||||| |||||||    
T  20399680 tgggtttgggttttctccgatttcaaaacacgggtatgggacgggtaacgggtatatagatacccaccccgaacccattcccaaac 20399595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 139 - 218
Target Start/End: Complemental strand, 27932501 - 27932422
Alignment:
Q  139 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatac 218  Q
    ||||| ||||||||| | ||||| |||||||||||| |  || |||||| || |||||||||||||||||||||||||||    
T  27932501 tgggtatgggttttccccgatttcaaaacacgggtatgggacgagtaacgggtatataggtacccaccccgaacccatac 27932422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 142 - 237
Target Start/End: Original strand, 37960965 - 37961060
Alignment:
Q  142 gtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgt 237  Q
    |||||||||||| | ||||| |||||||||||| |  ||| ||||| || |||||||||| |||||||||| ||||||||||| ||| | ||||||    
T  37960965 gtttgggttttccccgatttaaaaacacgggtatgggacaggtaacaggtatataggtacacaccccgaactcatacccaaacccgtcccaaatgt 37961060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 191 - 256
Target Start/End: Complemental strand, 29918643 - 29918578
Alignment:
Q  191 gatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaatcaatttattacc 256  Q
    |||||| |||||||||||||| |||||| ||||| ||| | ||||||| |||||||||||||||||    
T  29918643 gatatatgtacccaccccgaaaccatacacaaacccgtcccaaatgtaaaaaatcaatttattacc 29918578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 142 - 255
Target Start/End: Complemental strand, 30904130 - 30904018
Alignment:
Q  142 gtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaa 241  Q
    |||||||||| ||| ||||| ||||||||||||||| ||  ||||  | |||||| |||||||||||  |||||||||||||   || |  |||||||||    
T  30904130 gtttgggtttcctc-gatttcaaaacacgggtacgagacgggtaatggagatataagtacccaccccatacccatacccaaatcagtcccgaatgtagaa 30904032  T
Q  242 aatcaatttattac 255  Q
    ||||||||||||||    
T  30904031 aatcaatttattac 30904018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 139 - 252
Target Start/End: Complemental strand, 45236153 - 45236040
Alignment:
Q  139 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgta 238  Q
    ||||| || |||||| ||||||| |||||||||||| |  ||  ||||  || |||||||||||||||||||||||||| ||| || ||| | |||||||    
T  45236153 tgggtatgagttttccctgatttcaaaacacgggtatgggacgggtaatgggtatataggtacccaccccgaacccatatccatacccgtcccaaatgta 45236054  T
Q  239 gaaaatcaatttat 252  Q
     ||||| |||||||    
T  45236053 aaaaattaatttat 45236040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 192 - 228
Target Start/End: Complemental strand, 1012654 - 1012618
Alignment:
Q  192 atataggtacccaccccgaacccatacccaaactcgt 228  Q
    |||||||||||||||||||||||||||||||||||||    
T  1012654 atataggtacccaccccgaacccatacccaaactcgt 1012618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 192 - 252
Target Start/End: Complemental strand, 14186355 - 14186295
Alignment:
Q  192 atataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaatcaatttat 252  Q
    |||||||||| ||||| |||||||||||||||| ||| || |||||||||||| |||||||    
T  14186355 atataggtactcaccctgaacccatacccaaacccgtcctgaatgtagaaaattaatttat 14186295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 148 - 244
Target Start/End: Original strand, 24870033 - 24870129
Alignment:
Q  148 gttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaat 244  Q
    |||||| | |||||||||||||||||| |  ||  ||||| || ||||||||||||||||||| |||||||| |||| ||| | ||||||| |||||    
T  24870033 gttttccccgattttaaaacacgggtatgtgacgggtaacgggtatataggtacccaccccgagcccatacctaaacccgtcccaaatgtaaaaaat 24870129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 183 - 243
Target Start/End: Complemental strand, 32303105 - 32303045
Alignment:
Q  183 gtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaa 243  Q
    ||||| || ||||||||||||||||||||||||||||||||| ||| | ||||||| ||||    
T  32303105 gtaacgggtatataggtacccaccccgaacccatacccaaacccgtcccaaatgtaaaaaa 32303045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 163 - 223
Target Start/End: Complemental strand, 34777130 - 34777070
Alignment:
Q  163 aaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaa 223  Q
    |||||||||||| | ||| |||||| || || |||||||||||||||||||||||||||||    
T  34777130 aaaacacgggtatggaacgagtaacaggtatttaggtacccaccccgaacccatacccaaa 34777070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 157 - 256
Target Start/End: Original strand, 9476031 - 9476130
Alignment:
Q  157 gattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaatcaatttattacc 256  Q
    ||||| |||| |||| ||||  ||||||||| ||||||||  |||||||| ||||||||||||||||| | | |  |||||||||||| || ||||||||    
T  9476031 gatttcaaaaaacggatacgggacaagtaacggggatataaatacccacctcgaacccatacccaaacccatcccgaatgtagaaaattaaattattacc 9476130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 89 - 244
Target Start/End: Original strand, 9642301 - 9642456
Alignment:
Q  89 gggtacccgcccaaaccaatcccaatttgacggatttccttcgcttttactgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaact 188  Q
    ||||||||| ||| ||| |||||  |||||||| ||| |  |||||| ||||||||||||||||| | ||||| |||||||||||| |  ||  |||||     
T  9642301 gggtacccgtccagacccatcccggtttgacgggttttccccgctttgactgggtttgggttttccccgatttcaaaacacgggtatgggacgggtaacg 9642400  T
Q  189 gggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaat 244  Q
    ||| ||||  || ||| ||||||||||||| || || ||| | ||||||| |||||    
T  9642401 gggttatatatatccatcccgaacccatactcatacccgtcccaaatgtaaaaaat 9642456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 139 - 204
Target Start/End: Original strand, 6388516 - 6388581
Alignment:
Q  139 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtaccca 204  Q
    ||||||||||| ||| | ||||||||||||||||||| | ||  ||||| ||||||||||||||||    
T  6388516 tgggtttgggtcttccccgattttaaaacacgggtacaagacgggtaacggggatataggtaccca 6388581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 139 - 220
Target Start/End: Original strand, 15068588 - 15068668
Alignment:
Q  139 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccataccc 220  Q
    |||||| |||||||| | ||||| |||| |||||||||  ||| ||||| |||||||| ||| |||||||||||||||||||    
T  15068588 tgggttcgggttttccccgatttcaaaatacgggtacgggacaggtaac-gggatatatgtatccaccccgaacccataccc 15068668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 139 - 244
Target Start/End: Original strand, 29108822 - 29108927
Alignment:
Q  139 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgta 238  Q
    ||||| ||||||||  | |||||||||||| ||||| |  ||  ||||| || ||||| |||||||||||||||||||||||| || ||| | |||||||    
T  29108822 tgggtatgggtttttcccgattttaaaacatgggtatgggacgggtaacgggtatatatgtacccaccccgaacccatacccatacccgtcccaaatgta 29108921  T
Q  239 gaaaat 244  Q
     |||||    
T  29108922 aaaaat 29108927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 139 - 244
Target Start/End: Original strand, 39445576 - 39445681
Alignment:
Q  139 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgta 238  Q
    ||||| ||||||||  | ||||| |||||||||||| |  ||| ||||| ||  |||||||||||||||||||| |||||||| || ||| | |||||||    
T  39445576 tgggtatgggtttttcccgatttcaaaacacgggtatgggacaggtaacgggtttataggtacccaccccgaactcatacccatacccgtcccaaatgta 39445675  T
Q  239 gaaaat 244  Q
     |||||    
T  39445676 aaaaat 39445681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 183 - 226
Target Start/End: Complemental strand, 40789633 - 40789590
Alignment:
Q  183 gtaactgggatataggtacccaccccgaacccatacccaaactc 226  Q
    ||||| |||||||| |||||||||||||||| ||||||||||||    
T  40789633 gtaacagggatatatgtacccaccccgaacctatacccaaactc 40789590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 183 - 221
Target Start/End: Complemental strand, 2075902 - 2075864
Alignment:
Q  183 gtaactgggatataggtacccaccccgaacccataccca 221  Q
    ||||| || ||||||||||||||||||||||||||||||    
T  2075902 gtaacgggtatataggtacccaccccgaacccataccca 2075864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 224
Target Start/End: Original strand, 2183609 - 2183691
Alignment:
Q  142 gtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaac 224  Q
    |||||| ||||||| ||||| |||| |||||||||| | | ||||  | |||||| ||||||||||||||| ||||| |||||    
T  2183609 gtttggattttctccgatttcaaaatacgggtacgagagaggtaatggagatatatgtacccaccccgaactcatactcaaac 2183691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 223
Target Start/End: Complemental strand, 5700426 - 5700360
Alignment:
Q  157 gattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaa 223  Q
    ||||| ||||||| |||| || ||  ||||| ||||||||| |||||||| ||||||||||||||||    
T  5700426 gatttcaaaacacaggtatgagactggtaacggggatatagatacccacctcgaacccatacccaaa 5700360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 214 - 256
Target Start/End: Complemental strand, 14155545 - 14155503
Alignment:
Q  214 catacccaaactcgttctaaatgtagaaaatcaatttattacc 256  Q
    ||||||||||| | | |||||||||||||||||||||||||||    
T  14155545 catacccaaacccatcctaaatgtagaaaatcaatttattacc 14155503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 92 - 149
Target Start/End: Original strand, 2075775 - 2075832
Alignment:
Q  92 tacccgcccaaaccaatcccaatttgacggatttccttcgcttttactgggtttgggt 149  Q
    ||||||||  |||||| ||||||||||||||||| || || ||| |||||||||||||    
T  2075775 tacccgcctgaaccaaacccaatttgacggattttctccgttttgactgggtttgggt 2075832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 143 - 224
Target Start/End: Complemental strand, 10297542 - 10297461
Alignment:
Q  143 tttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaac 224  Q
    ||||||||||| | ||||| |||| ||||| |||  ||| ||||| |||||||| ||||| |||| ||||||||||| ||||    
T  10297542 tttgggttttccccgatttcaaaatacggggacgggacaggtaacggggatatatgtacctaccctgaacccataccaaaac 10297461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 190 - 223
Target Start/End: Complemental strand, 36897093 - 36897060
Alignment:
Q  190 ggatataggtacccaccccgaacccatacccaaa 223  Q
    ||||||||||| ||||||||||||||||||||||    
T  36897093 ggatataggtaaccaccccgaacccatacccaaa 36897060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 148 - 221
Target Start/End: Original strand, 40248380 - 40248453
Alignment:
Q  148 gttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccataccca 221  Q
    |||||| | ||||| |||||||||||| || ||   |||| || ||||||||||||| ||||||||||||||||    
T  40248380 gttttccccgatttcaaaacacgggtatgagacggataacgggtatataggtacccatcccgaacccataccca 40248453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 223
Target Start/End: Original strand, 43113670 - 43113710
Alignment:
Q  183 gtaactgggatataggtacccaccccgaacccatacccaaa 223  Q
    ||||| || ||||||||||||||||||||| ||||||||||    
T  43113670 gtaacaggtatataggtacccaccccgaactcatacccaaa 43113710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 139 - 226
Target Start/End: Complemental strand, 211452 - 211365
Alignment:
Q  139 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactc 226  Q
    ||||||||||||||||| ||||| |||| |||||||||| ||  ||||| |||||||| |||||||||||||||||||||||||||||    
T  211452 tgggtttgggttttctccgatttcaaaatacgggtacgagacgggtaacagggatatatgtacccaccccgaacccatacccaaactc 211365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 54; Significance: 4e-22; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 92 - 253
Target Start/End: Complemental strand, 6810293 - 6810132
Alignment:
Q  92 tacccgcccaaaccaatcccaatttgacggatttccttcgcttttactgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactggg 191  Q
    |||||| || |||||| | |||||||||||||||  | |||||| | || |||||||||||| | ||||||| |||||||||||| |||  |||||  ||    
T  6810293 tacccgtccgaaccaaactcaatttgacggattttttccgctttgaatgagtttgggttttccccgattttagaacacgggtacggaacgggtaacgagg 6810194  T
Q  192 atataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaatcaatttatt 253  Q
    ||||| |||| |||||||||||||||||||||| | | |  ||||  |||||||||||||||    
T  6810193 atataagtactcaccccgaacccatacccaaacccatcccgaatggtgaaaatcaatttatt 6810132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 92 - 244
Target Start/End: Original strand, 35193943 - 35194095
Alignment:
Q  92 tacccgcccaaaccaatcccaatttgacggatttccttcgcttttactgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactggg 191  Q
    |||||||||||| ||| |||||||||||||||||  | || |||  |||| ||||||| ||||||| |||||||||||||||| |  ||  ||||| ||     
T  35193943 tacccgcccaaatcaaacccaatttgacggattttttccgttttggctggatttgggtattctctgtttttaaaacacgggtatgggacgggtaacgggt 35194042  T
Q  192 atataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaat 244  Q
    ||||||||||||||||| ||| ||||| ||||| ||| |  ||||||||||||    
T  35194043 atataggtacccaccccaaactcatactcaaacccgtcccgaatgtagaaaat 35194095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 92 - 243
Target Start/End: Complemental strand, 12447515 - 12447365
Alignment:
Q  92 tacccgcccaaaccaatcccaatttgacggatttccttcgcttttactgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactggg 191  Q
    ||||| ||| |||||| |||||||||||||||||||  |  ||| |||||||||||||||||  ||||| |||||||| |||| |  ||| ||||  ||     
T  12447515 tacccacccgaaccaaacccaatttgacggatttccc-cattttgactgggtttgggttttccttgattgtaaaacacaggtatgggacaggtaatgggt 12447417  T
Q  192 atataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaa 243  Q
    |||||||||||||||||||||| |||||||||| ||| | |||| |||||||    
T  12447416 atataggtacccaccccgaacctatacccaaacccgtcccaaatatagaaaa 12447365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 93 - 224
Target Start/End: Original strand, 12712512 - 12712643
Alignment:
Q  93 acccgcccaaaccaatcccaatttgacggatttccttcgcttttactgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactggga 192  Q
    ||||||||||||||| ||| ||||||| | ||| |  || ||| |||| |||||||||||||| ||||| |||| |||||||||  ||   |||| | ||    
T  12712512 acccgcccaaaccaaccccgatttgacaggttttccccgatttgactgagtttgggttttctccgatttcaaaatacgggtacgggacggataacggaga 12712611  T
Q  193 tataggtacccaccccgaacccatacccaaac 224  Q
    |||| ||||||||| |||||||||||||||||    
T  12712612 tatatgtacccacctcgaacccatacccaaac 12712643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 89 - 256
Target Start/End: Complemental strand, 17153306 - 17153140
Alignment:
Q  89 gggtacccgcccaaaccaatcccaatttgacggatttccttcgcttttactgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaact 188  Q
    |||||| ||||| |||||| |||| |||||||| ||||  | | ||| |||| ||||| ||||| || |||||||||||| |||||||  ||   |||||    
T  17153306 gggtactcgcccgaaccaaacccactttgacggttttctct-gttttaactgagtttgagttttttccgattttaaaacatgggtacgggacggataact 17153208  T
Q  189 gggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaatcaatttattacc 256  Q
      |||||| |||| || ||| ||||||||||||||| ||| |  ||||||||||||||||||||||||    
T  17153207 atgatatatgtactcatcccaaacccatacccaaacccgtcccgaatgtagaaaatcaatttattacc 17153140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 145 - 244
Target Start/End: Complemental strand, 30996678 - 30996579
Alignment:
Q  145 tgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaat 244  Q
    ||||||||||| |||||||||||||| ||| |  ||| ||||| || ||||||||||||||||||||| || |||||||| ||| | ||||||| |||||    
T  30996678 tgggttttctccgattttaaaacacgagtatgggacaggtaacgggtatataggtacccaccccgaacacacacccaaacccgtcccaaatgtaaaaaat 30996579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 148 - 256
Target Start/End: Complemental strand, 8020694 - 8020586
Alignment:
Q  148 gttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaatcaa 247  Q
    |||||| | ||||| |||||||||||||  ||   ||||| ||||||||||||| || | ||||| ||||| ||||| |||||| |||||||||||||||    
T  8020694 gttttccccgatttcaaaacacgggtactgaatgggtaacagggatataggtactcatctcgaactcatacgcaaacccgttctgaatgtagaaaatcaa 8020595  T
Q  248 tttattacc 256  Q
    |||| ||||    
T  8020594 tttactacc 8020586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 92 - 252
Target Start/End: Original strand, 38006423 - 38006583
Alignment:
Q  92 tacccgcccaaaccaatcccaatttgacggatttccttcgcttttactgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactggg 191  Q
    ||||||||| ||||||  || ||||||||| ||| || |  ||| ||||||||||||||||| |  |||| |||| ||||||| |  ||  ||||| |      
T  38006423 tacccgccctaaccaaatccgatttgacgggttttctccattttgactgggtttgggttttccccaatttcaaaatacgggtatgggacgcgtaacagat 38006522  T
Q  192 atataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaatcaatttat 252  Q
    ||||||||||||||||||||||||||||||||  ||| |  ||||| |||||| |||||||    
T  38006523 atataggtacccaccccgaacccatacccaaatccgtcccgaatgttgaaaattaatttat 38006583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 89 - 220
Target Start/End: Original strand, 10822477 - 10822608
Alignment:
Q  89 gggtacccgcccaaaccaatcccaatttgacggatttccttcgcttttactgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaact 188  Q
    ||||||||||||||||| | | | ||||||||| ||| |  |  ||| ||||| ||||||||||||| ||||| ||||||||||||    ||  |||||     
T  10822477 gggtacccgcccaaacccacctcgatttgacgggttttccccattttgactggatttgggttttctccgatttcaaaacacgggtataggacgggtaacg 10822576  T
Q  189 gggatataggtacccaccccgaacccataccc 220  Q
    ||| |||| |||||||||||||||||||||||    
T  10822577 gggttatatgtacccaccccgaacccataccc 10822608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 139 - 244
Target Start/End: Complemental strand, 4920914 - 4920809
Alignment:
Q  139 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgta 238  Q
    ||||| ||||||||| | ||| | |||||||||||| |  ||  ||||| || ||||||||| ||||||||||||||||||||||| ||| | |||||||    
T  4920914 tgggtatgggttttccccgatctcaaaacacgggtatgggacgggtaacgggtatataggtatccaccccgaacccatacccaaacccgtcccaaatgta 4920815  T
Q  239 gaaaat 244  Q
     |||||    
T  4920814 aaaaat 4920809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 142 - 223
Target Start/End: Original strand, 28569025 - 28569106
Alignment:
Q  142 gtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaa 223  Q
    |||||| ||||| | ||||| ||||  ||||||||  ||  ||||| |||||||||||||||||||||||||||||||||||    
T  28569025 gtttggattttccccgatttcaaaatgcgggtacgggacgggtaacggggatataggtacccaccccgaacccatacccaaa 28569106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 192 - 244
Target Start/End: Complemental strand, 10127116 - 10127064
Alignment:
Q  192 atataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaat 244  Q
    ||||||||||||||||||||||||||||||||| ||| | ||||||| |||||    
T  10127116 atataggtacccaccccgaacccatacccaaacccgtcccaaatgtaaaaaat 10127064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 142 - 254
Target Start/End: Original strand, 16311297 - 16311409
Alignment:
Q  142 gtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaa 241  Q
    ||||| ||||| || ||||| |||||||| |||||| ||   |||| |||||||||||||||||||||||||||||  |||||  ||    ||||| |||    
T  16311297 gtttgagttttttccgatttcaaaacacgagtacgagacggataacagggatataggtacccaccccgaacccatattcaaacctgtctcgaatgttgaa 16311396  T
Q  242 aatcaatttatta 254  Q
    |||||||||||||    
T  16311397 aatcaatttatta 16311409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 146 - 254
Target Start/End: Original strand, 18451893 - 18452001
Alignment:
Q  146 gggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaatc 245  Q
    |||||||| | ||||| |||| || ||||||| ||| |||||   |||||| ||||||||||||||| ||||  ||||||||| |  | |||||||||||    
T  18451893 gggttttccccgatttgaaaatacaggtacgagacatgtaacacagatataagtacccaccccgaactcataatcaaactcgtcccgattgtagaaaatc 18451992  T
Q  246 aatttatta 254  Q
    |||||||||    
T  18451993 aatttatta 18452001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 139 - 223
Target Start/End: Original strand, 20973497 - 20973581
Alignment:
Q  139 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaa 223  Q
    ||||| ||||||||| | |||||| ||||||||||| |  |   ||||| || ||||||||||||||||||||||||||||||||    
T  20973497 tgggtatgggttttccccgattttcaaacacgggtatgggatgggtaacgggtatataggtacccaccccgaacccatacccaaa 20973581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 93 - 224
Target Start/End: Original strand, 12773776 - 12773907
Alignment:
Q  93 acccgcccaaaccaatcccaatttgacggatttccttcgcttttactgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactggga 192  Q
    ||||||||||||||| ||| ||||||| | ||| |  || ||| | || |||||||||||||| ||||| |||| |||||||||  ||   |||| | ||    
T  12773776 acccgcccaaaccaaccccgatttgacaggttttccccgatttgattgagtttgggttttctccgatttcaaaatacgggtacgggacggataacggaga 12773875  T
Q  193 tataggtacccaccccgaacccatacccaaac 224  Q
    |||| ||||||||| ||||||||||| |||||    
T  12773876 tatatgtacccacctcgaacccatactcaaac 12773907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 145 - 244
Target Start/End: Complemental strand, 15890288 - 15890190
Alignment:
Q  145 tgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaat 244  Q
    ||||||||||| ||||| |||||||||||| |  ||  ||||| || ||||||||||||| |||||||||||||||| || ||| | ||||||| |||||    
T  15890288 tgggttttctccgatttcaaaacacgggtatgggacgggtaacgggtatataggtaccca-cccgaacccatacccatacccgtcccaaatgtaaaaaat 15890190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 139 - 244
Target Start/End: Complemental strand, 4583207 - 4583102
Alignment:
Q  139 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgta 238  Q
    ||||| ||||||||| | ||||| |||||||||||| |  ||  ||||| || |||||||| |||||||| |||||||||||| || ||| | |||||||    
T  4583207 tgggtatgggttttccccgatttcaaaacacgggtatgggacgggtaacgggtatataggttcccaccccaaacccatacccatacccgtcccaaatgta 4583108  T
Q  239 gaaaat 244  Q
     |||||    
T  4583107 aaaaat 4583102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 183 - 244
Target Start/End: Original strand, 6092563 - 6092624
Alignment:
Q  183 gtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaat 244  Q
    ||||| || ||||||||||||||||||||||||||||||||  ||| | ||||||| |||||    
T  6092563 gtaacgggtatataggtacccaccccgaacccatacccaaatccgtcccaaatgtaaaaaat 6092624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 183 - 252
Target Start/End: Original strand, 12834619 - 12834688
Alignment:
Q  183 gtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaatcaatttat 252  Q
    ||||| || ||||||||||| |||||||||||||||||| || ||| | ||||||| ||||| |||||||    
T  12834619 gtaacaggtatataggtacctaccccgaacccatacccatacccgtcccaaatgtaaaaaattaatttat 12834688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 139 - 244
Target Start/End: Original strand, 12866552 - 12866657
Alignment:
Q  139 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgta 238  Q
    ||||| || |||||||| ||||| |||||| ||||| |  ||  ||||| || ||||||||||||||| |||||||||||||| || ||| | |||||||    
T  12866552 tgggtatgagttttctccgatttcaaaacatgggtatgggacgggtaacaggtatataggtacccaccgcgaacccatacccatacccgtcccaaatgta 12866651  T
Q  239 gaaaat 244  Q
     |||||    
T  12866652 aaaaat 12866657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 183 - 256
Target Start/End: Complemental strand, 29665015 - 29664942
Alignment:
Q  183 gtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaatcaatttattacc 256  Q
    ||||| |||||||||||||||||  ||||| ||||||||||| ||| |  |||||| |||||||||||| ||||    
T  29665015 gtaacggggatataggtacccacttcgaactcatacccaaacccgtcccgaatgtacaaaatcaatttactacc 29664942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 196 - 244
Target Start/End: Original strand, 22694959 - 22695007
Alignment:
Q  196 aggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaat 244  Q
    ||||||||||||||||||||||||||||| ||| | ||||||| |||||    
T  22694959 aggtacccaccccgaacccatacccaaacccgtcccaaatgtaaaaaat 22695007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 254
Target Start/End: Complemental strand, 38973007 - 38972895
Alignment:
Q  142 gtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaa 241  Q
    |||||||||||  | ||||| |||||| ||||| |  | | ||||| || ||||||||||||||||||||||||||| ||||| | |   ||||| | ||    
T  38973007 gtttgggtttttcccgatttcaaaacatgggtatgggataggtaacgggaatataggtacccaccccgaacccatactcaaacccatctcaaatgcataa 38972908  T
Q  242 aatcaatttatta 254  Q
    |||||||||||||    
T  38972907 aatcaatttatta 38972895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 192 - 244
Target Start/End: Original strand, 42987533 - 42987585
Alignment:
Q  192 atataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaat 244  Q
    ||||||||||||| ||||||||||||||||||| ||| | ||||||| |||||    
T  42987533 atataggtacccatcccgaacccatacccaaacccgtcccaaatgtaaaaaat 42987585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 141 - 256
Target Start/End: Original strand, 32574941 - 32575056
Alignment:
Q  141 ggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtaga 240  Q
    ||||||||||||| | ||||| ||||||| | ||||  |   |||||  ||||||| ||||||| |||||||||| |||||||| ||  |  ||||||||    
T  32574941 ggtttgggttttccccgatttcaaaacacagatacgggatgggtaacatggatatatgtacccatcccgaacccaaacccaaacccgccccgaatgtaga 32575040  T
Q  241 aaatcaatttattacc 256  Q
    | ||||||||||||||    
T  32575041 atatcaatttattacc 32575056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 221
Target Start/End: Original strand, 29245952 - 29246034
Alignment:
Q  139 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccataccca 221  Q
    ||||| || |||||||| ||||| |||||||||||| |  || | ||||  | ||||||||||||||||| ||||||||||||    
T  29245952 tgggtatgagttttctccgatttcaaaacacgggtatgggacgaataacatgtatataggtacccaccccaaacccataccca 29246034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 256
Target Start/End: Original strand, 40187661 - 40187774
Alignment:
Q  142 gtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaa 241  Q
    |||||||||||| |  |||| ||||||||||| ||| ||  ||||| | ||||||||||  |||||  ||| ||||||||||||||| |  ||| |||||    
T  40187661 gtttgggttttccccaatttcaaaacacgggtgcgagacgggtaacggagatataggtattcaccca-aactcatacccaaactcgtcccgaatatagaa 40187759  T
Q  242 aatcaatttattacc 256  Q
    ||| |||||||||||    
T  40187760 aattaatttattacc 40187774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 183 - 244
Target Start/End: Complemental strand, 1218799 - 1218738
Alignment:
Q  183 gtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaat 244  Q
    ||||| || |||||||||||||| ||||||||||||||| || ||| | ||||||| |||||    
T  1218799 gtaacgggtatataggtacccactccgaacccatacccatacccgtcccaaatgtaaaaaat 1218738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 189 - 254
Target Start/End: Original strand, 7350458 - 7350523
Alignment:
Q  189 gggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaatcaatttatta 254  Q
    |||||||||| | |||||||||||||||||  |||| |||   ||||||||||||| |||||||||    
T  7350458 gggatataggcatccaccccgaacccatacttaaacccgtctcaaatgtagaaaattaatttatta 7350523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 207 - 256
Target Start/End: Complemental strand, 12457537 - 12457488
Alignment:
Q  207 ccgaacccatacccaaactcgttctaaatgtagaaaatcaatttattacc 256  Q
    |||||| ||||||||||| ||| |  ||||||||||||||||||||||||    
T  12457537 ccgaactcatacccaaacccgtcccgaatgtagaaaatcaatttattacc 12457488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 139 - 224
Target Start/End: Original strand, 23044992 - 23045077
Alignment:
Q  139 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaac 224  Q
    ||||||| ||||||| | ||||| |||| |||||||||  |   ||||| | |||||| |||||||||||||||||||||| ||||    
T  23044992 tgggtttaggttttccccgatttcaaaatacgggtacgggatgggtaacggagatatatgtacccaccccgaacccataccaaaac 23045077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 53; Significance: 2e-21; HSPs: 28)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 95 - 243
Target Start/End: Original strand, 6027845 - 6027993
Alignment:
Q  95 ccgcccaaaccaatcccaatttgacggatttccttcgcttttactgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggata 194  Q
    |||||| |||||| ||||||||||||| ||| |  || ||| | ||||||||||||||| | |||||||||||| ||||| || ||  ||||| || |||    
T  6027845 ccgcccgaaccaaacccaatttgacgggttttccccgttttgattgggtttgggttttccccgattttaaaacatgggtatgagacgggtaacaggtata 6027944  T
Q  195 taggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaa 243  Q
    |||||||||||||||||||||||| || || ||| || |||| ||||||    
T  6027945 taggtacccaccccgaacccatactcatacccgtcctgaatgcagaaaa 6027993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 139 - 237
Target Start/End: Original strand, 13705361 - 13705459
Alignment:
Q  139 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgt 237  Q
    ||||| || |||||| | ||||| |||||||||||| || ||| ||||| || |||||||||||||||||||||||||||| |||| ||| | ||||||    
T  13705361 tgggtatgagttttccccgatttcaaaacacgggtatgagacaggtaacgggtatataggtacccaccccgaacccatacctaaacccgtcccaaatgt 13705459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 142 - 256
Target Start/End: Complemental strand, 30697010 - 30696896
Alignment:
Q  142 gtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaa 241  Q
    |||| |||||||  ||||||||||||| || ||||| ||  ||||| | |||||| ||||||||||||||| |||||||||||   | | ||||||| ||    
T  30697010 gtttaggttttcattgattttaaaacatggatacgagacgggtaacagagatatatgtacccaccccgaactcatacccaaacctatcccaaatgtaaaa 30696911  T
Q  242 aatcaatttattacc 256  Q
    |||||||||||||||    
T  30696910 aatcaatttattacc 30696896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 183 - 256
Target Start/End: Original strand, 4961495 - 4961568
Alignment:
Q  183 gtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaatcaatttattacc 256  Q
    ||||| ||||||||||||| |||| ||||||||||||||||||||| |  ||| |||||||| |||||||||||    
T  4961495 gtaacagggatataggtacacacctcgaacccatacccaaactcgtcccgaatatagaaaatgaatttattacc 4961568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 139 - 224
Target Start/End: Original strand, 38342519 - 38342604
Alignment:
Q  139 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaac 224  Q
    |||||||| |||||| | |||||||||| |||| ||||  ||  ||||| |||||||| |||||||||||||||||||||||||||    
T  38342519 tgggtttgagttttccccgattttaaaatacggatacgggacgggtaacggggatatatgtacccaccccgaacccatacccaaac 38342604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 140 - 243
Target Start/End: Original strand, 35248386 - 35248489
Alignment:
Q  140 gggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtag 239  Q
    ||||||||||||||   ||||  |||||||||||| |  ||  ||||  |||||| ||||||||||||||||||||||||||||| ||| || |||||||    
T  35248386 gggtttgggttttccacgattacaaaacacgggtatgggacgggtaaaggggataaaggtacccaccccgaacccatacccaaacccgtcctgaatgtag 35248485  T
Q  240 aaaa 243  Q
    ||||    
T  35248486 aaaa 35248489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 139 - 244
Target Start/End: Original strand, 8915938 - 8916042
Alignment:
Q  139 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgta 238  Q
    ||||| ||||||||||| ||| | |||||||||||| |  ||  ||||| || ||||||||||||||||||||||||||| ||||| ||| | |||||||    
T  8915938 tgggtatgggttttctc-gatctcaaaacacgggtatgggacgggtaacaggtatataggtacccaccccgaacccatactcaaacccgtcccaaatgta 8916036  T
Q  239 gaaaat 244  Q
     |||||    
T  8916037 aaaaat 8916042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 139 - 244
Target Start/End: Complemental strand, 37999572 - 37999467
Alignment:
Q  139 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgta 238  Q
    ||||| ||||||||| | ||| | |||||||||||| || ||  ||||| || ||||| ||||||||||||||| ||||||||||| ||| | |||||||    
T  37999572 tgggtatgggttttccccgatctcaaaacacgggtatgagacgggtaacgggtatataagtacccaccccgaactcatacccaaacccgtcccaaatgta 37999473  T
Q  239 gaaaat 244  Q
     |||||    
T  37999472 aaaaat 37999467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 183 - 243
Target Start/End: Original strand, 24414176 - 24414236
Alignment:
Q  183 gtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaa 243  Q
    ||||| || ||||||||||||||||||||||||||||||||| ||| | ||||||| ||||    
T  24414176 gtaacaggtatataggtacccaccccgaacccatacccaaacccgtcccaaatgtaaaaaa 24414236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 189 - 253
Target Start/End: Complemental strand, 35965374 - 35965310
Alignment:
Q  189 gggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaatcaatttatt 253  Q
    |||||| | |||||||| |||||||||||||||||| ||| |  |||||||||||||||||||||    
T  35965374 gggatacatgtacccactccgaacccatacccaaacccgtcccgaatgtagaaaatcaatttatt 35965310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 137 - 224
Target Start/End: Complemental strand, 18485739 - 18485652
Alignment:
Q  137 actgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaac 224  Q
    |||||||||||||| ||   |||||||||| ||||||||   ||  ||||| |||||||| |||||||||| ||||||||||||||||    
T  18485739 actgggtttgggttatcctcgattttaaaatacgggtacagtacgggtaacggggatatatgtacccaccctgaacccatacccaaac 18485652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 141 - 224
Target Start/End: Complemental strand, 43371640 - 43371557
Alignment:
Q  141 ggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaac 224  Q
    |||||| |||||| | |||||||||| |||||||||  ||  ||||| |||||||| ||||||||||| ||| |||||||||||    
T  43371640 ggtttgagttttccccgattttaaaatacgggtacgggacgggtaacggggatatatgtacccaccccaaactcatacccaaac 43371557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 138 - 256
Target Start/End: Complemental strand, 25210467 - 25210349
Alignment:
Q  138 ctgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgt 237  Q
    |||||||| ||||||  | || ||||||||||||||| |  ||  |||||  ||||||| ||||||||||| |||||||||| |||| | | |  |||||    
T  25210467 ctgggtttaggtttttcccgactttaaaacacgggtatgggacgggtaacgaggatatatgtacccaccccaaacccataccaaaacccctcccgaatgt 25210368  T
Q  238 agaaaatcaatttattacc 256  Q
    ||||||||||||| |||||    
T  25210367 agaaaatcaatttgttacc 25210349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 139 - 244
Target Start/End: Original strand, 7314648 - 7314753
Alignment:
Q  139 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgta 238  Q
    ||||| ||||||||| | |||||||||| ||| ||| |  ||  ||||| || |||||||| ||||||||||||||||||||| || ||| | |||||||    
T  7314648 tgggtatgggttttccccgattttaaaatacgagtatgggacgggtaacgggtatataggttcccaccccgaacccatacccacacccgtcccaaatgta 7314747  T
Q  239 gaaaat 244  Q
     |||||    
T  7314748 aaaaat 7314753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 139 - 220
Target Start/End: Original strand, 24051624 - 24051705
Alignment:
Q  139 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccataccc 220  Q
    |||||||||| |||||| |||||||||| ||| ||| |  ||  ||||| |||||||| ||||| |||||||||||||||||    
T  24051624 tgggtttgggatttctccgattttaaaatacgagtatgggacgggtaacagggatatatgtacctaccccgaacccataccc 24051705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 183 - 224
Target Start/End: Complemental strand, 30846991 - 30846950
Alignment:
Q  183 gtaactgggatataggtacccaccccgaacccatacccaaac 224  Q
    ||||| || |||||||||||||||||||||||||||||||||    
T  30846991 gtaacgggtatataggtacccaccccgaacccatacccaaac 30846950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 139 - 220
Target Start/End: Complemental strand, 37106781 - 37106700
Alignment:
Q  139 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccataccc 220  Q
    ||||| ||||||||| | ||||| |||||||||||| |  ||  ||||| || |||||||||||||| ||||||||||||||    
T  37106781 tgggtatgggttttccccgatttcaaaacacgggtatgggacgggtaacgggtatataggtacccactccgaacccataccc 37106700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 183 - 243
Target Start/End: Original strand, 36128150 - 36128210
Alignment:
Q  183 gtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaa 243  Q
    ||||| || |||||||||| |||||||||||||||||||||| ||| | ||||||| ||||    
T  36128150 gtaacgggtatataggtactcaccccgaacccatacccaaacccgtcccaaatgtaaaaaa 36128210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 192 - 243
Target Start/End: Complemental strand, 9632422 - 9632371
Alignment:
Q  192 atataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaa 243  Q
    ||||||||| ||||||||||||||||||||||| ||| | ||||||| ||||    
T  9632422 atataggtatccaccccgaacccatacccaaacccgtcccaaatgtaaaaaa 9632371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 139 - 254
Target Start/End: Original strand, 34458833 - 34458947
Alignment:
Q  139 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgta 238  Q
    |||||||||||||||||  |||| |||||||||||||| ||| |||||    |||||| ||| ||  ||||||| | || ||||||||||||  ||||||    
T  34458833 tgggtttgggttttctccaatttcaaaacacgggtacggaacgagtaatgaagatatatgtatccgtcccgaactcctatccaaactcgttc-gaatgta 34458931  T
Q  239 gaaaatcaatttatta 254  Q
     ||||| |||||||||    
T  34458932 aaaaataaatttatta 34458947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 221
Target Start/End: Complemental strand, 22900883 - 22900801
Alignment:
Q  139 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccataccca 221  Q
    ||||||||||||||  | ||||| |||||||||||| |  || |||||| ||| ||||  |||||||||||||| ||||||||    
T  22900883 tgggtttgggtttttcccgatttcaaaacacgggtatgggacgagtaacggggttatatatacccaccccgaactcataccca 22900801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 143 - 224
Target Start/End: Complemental strand, 3547251 - 3547170
Alignment:
Q  143 tttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaac 224  Q
    ||||||||||  | ||||| |||| |||||||||  ||  ||||| | |||||| |||||||||||||||||||| ||||||    
T  3547251 tttgggtttttaccgatttcaaaatacgggtacgggacgggtaacggagatatatgtacccaccccgaacccatatccaaac 3547170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 183 - 224
Target Start/End: Complemental strand, 14331572 - 14331531
Alignment:
Q  183 gtaactgggatataggtacccaccccgaacccatacccaaac 224  Q
    ||||| |||||||| |||||||| ||||||||||||||||||    
T  14331572 gtaacggggatatatgtacccactccgaacccatacccaaac 14331531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 163 - 224
Target Start/End: Original strand, 42798012 - 42798073
Alignment:
Q  163 aaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaac 224  Q
    |||||||||||| || ||  ||||| || ||||| ||||||||||||||||||||| |||||    
T  42798012 aaaacacgggtatgagacgggtaacgggtatataagtacccaccccgaacccatacacaaac 42798073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 192 - 253
Target Start/End: Complemental strand, 45256859 - 45256798
Alignment:
Q  192 atataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaatcaatttatt 253  Q
    ||||| |||||||||||||||||||||| |||| ||| | ||||||| ||||| | ||||||    
T  45256859 atataagtacccaccccgaacccatacctaaacccgtcccaaatgtaaaaaattactttatt 45256798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 192 - 244
Target Start/End: Complemental strand, 10920681 - 10920629
Alignment:
Q  192 atataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaat 244  Q
    ||||||||| ||||||||||||||||||||||  ||| | ||||||| |||||    
T  10920681 atataggtatccaccccgaacccatacccaaatccgtcccaaatgtaaaaaat 10920629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 89 - 121
Target Start/End: Original strand, 39256398 - 39256430
Alignment:
Q  89 gggtacccgcccaaaccaatcccaatttgacgg 121  Q
    ||||||||||||||||||| |||||||||||||    
T  39256398 gggtacccgcccaaaccaaccccaatttgacgg 39256430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 217
Target Start/End: Complemental strand, 45115629 - 45115569
Alignment:
Q  157 gattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccata 217  Q
    ||||| |||||||||||| || ||  ||||| || ||||||||||||| ||||||||||||    
T  45115629 gatttcaaaacacgggtatgagacgggtaacaggtatataggtacccatcccgaacccata 45115569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 49; Significance: 4e-19; HSPs: 43)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 92 - 236
Target Start/End: Complemental strand, 24425520 - 24425376
Alignment:
Q  92 tacccgcccaaaccaatcccaatttgacggatttccttcgcttttactgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactggg 191  Q
    |||| |||| |||||| ||||||||||||||||| || || ||| | ||||||||  ||||||||||||| |||||||||||| |  ||  ||||| ||     
T  24425520 taccagcccgaaccaaacccaatttgacggattttctccgttttgattgggtttgaattttctctgatttcaaaacacgggtatgggacgggtaacgggt 24425421  T
Q  192 atataggtacccaccccgaacccatacccaaactcgttctaaatg 236  Q
    |||||||||||||||| || |||||  |||||| ||||| |||||    
T  24425420 atataggtacccaccctgaccccatttccaaacccgttccaaatg 24425376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 139 - 244
Target Start/End: Complemental strand, 16866262 - 16866157
Alignment:
Q  139 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgta 238  Q
    ||||| ||||||||| | ||| | |||||||||||| |  || |||||| || ||||||||||||||||||||||||||||||||| ||| | |||||||    
T  16866262 tgggtatgggttttccccgatctcaaaacacgggtatgggacgagtaacgggtatataggtacccaccccgaacccatacccaaacccgtcccaaatgta 16866163  T
Q  239 gaaaat 244  Q
     |||||    
T  16866162 aaaaat 16866157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 139 - 221
Target Start/End: Complemental strand, 10072559 - 10072477
Alignment:
Q  139 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccataccca 221  Q
    ||||| ||||||||| | ||||| |||||||||||| | |||  ||||| || ||||||||||||||||||||||||||||||    
T  10072559 tgggtatgggttttccccgatttcaaaacacgggtatggaacgggtaacgggtatataggtacccaccccgaacccataccca 10072477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 139 - 229
Target Start/End: Complemental strand, 26623044 - 26622954
Alignment:
Q  139 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgtt 229  Q
    ||||||||||||||| ||||||| |||||||||||| |  |   ||||  || ||||| ||||||||||||||||||||||||||||||||    
T  26623044 tgggtttgggttttccctgatttcaaaacacgggtatgggatgggtaatgggtatataagtacccaccccgaacccatacccaaactcgtt 26622954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 139 - 224
Target Start/End: Original strand, 18825872 - 18825957
Alignment:
Q  139 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaac 224  Q
    ||||||||||||||| | ||||| |||||||||||| |  ||  ||||| || ||||||||||||||||||||||| |||||||||    
T  18825872 tgggtttgggttttccccgatttcaaaacacgggtatgggacgggtaacgggtatataggtacccaccccgaacccgtacccaaac 18825957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 87 - 224
Target Start/End: Original strand, 19439958 - 19440095
Alignment:
Q  87 gcgggtacccgcccaaaccaatcccaatttgacggatttccttcgcttttactgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaa 186  Q
    |||||||||| | | |||||| ||||||||||||| ||| |  |||||| |||||||||| |||||| ||||||| |||||||||||  |  |   ||||    
T  19439958 gcgggtaccctctcgaaccaaacccaatttgacgggttttccccgctttgactgggtttgagttttccctgatttgaaaacacgggtttgggatgggtaa 19440057  T
Q  187 ctgggatataggtacccaccccgaacccatacccaaac 224  Q
      |||||||| ||||||||  |||||||||||||||||    
T  19440058 tggggatatatgtacccacttcgaacccatacccaaac 19440095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 87 - 228
Target Start/End: Original strand, 23533552 - 23533692
Alignment:
Q  87 gcgggtacccgcccaaaccaatcccaatttgacggatttccttcgcttttactgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaa 186  Q
    |||||||||| ||| |||||| ||||||||||||| |||    || ||| ||||||||||||||||| | ||||| |||| ||||||| |  |   ||||    
T  23533552 gcgggtaccctcccgaaccaaacccaatttgacgggtttttcccgatttgactgggtttgggttttccccgatttgaaaatacgggtatgcgatgggtaa 23533651  T
Q  187 ctgggatataggtacccaccccgaacccatacccaaactcgt 228  Q
     ||||||||| ||||||||  |||||||||||||||||||||    
T  23533652 -tgggatatatgtacccacttcgaacccatacccaaactcgt 23533692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 139 - 224
Target Start/End: Complemental strand, 32546285 - 32546200
Alignment:
Q  139 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaac 224  Q
    ||||||||| ||||  | ||||| |||| ||||||||| |||  ||||| |||||||| |||||||||||||||||||||||||||    
T  32546285 tgggtttggatttttcccgatttcaaaatacgggtacggaacgggtaacggggatatatgtacccaccccgaacccatacccaaac 32546200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 184 - 256
Target Start/End: Complemental strand, 3157131 - 3157059
Alignment:
Q  184 taactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaatcaatttattacc 256  Q
    |||| ||||||||||||||||| ||||||| |||||||||| ||| | |||  ||||||||||||||||||||    
T  3157131 taacggggatataggtacccacaccgaacctatacccaaacccgtcccaaacatagaaaatcaatttattacc 3157059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 139 - 243
Target Start/End: Complemental strand, 35074563 - 35074459
Alignment:
Q  139 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgta 238  Q
    ||||| ||||||||| | ||| |||||||||||||| |  ||  ||||| || ||||||||||||| ||||||||||||||||||| ||| | |||||||    
T  35074563 tgggtatgggttttccccgatcttaaaacacgggtatgggacgggtaacgggtatataggtacccaacccgaacccatacccaaacccgtcccaaatgta 35074464  T
Q  239 gaaaa 243  Q
     ||||    
T  35074463 aaaaa 35074459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 92 - 223
Target Start/End: Complemental strand, 3920678 - 3920547
Alignment:
Q  92 tacccgcccaaaccaatcccaatttgacggatttccttcgcttttactgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactggg 191  Q
    ||||| ||| |||||| |||||||||| || |||    || ||| ||||||||||||||||| | ||||| ||||||| |||| |  ||   |||| ||     
T  3920678 tacccacccgaaccaaacccaatttgatgggtttttcccgttttgactgggtttgggttttccccgatttcaaaacactggtatgggacggataacaggt 3920579  T
Q  192 atataggtacccaccccgaacccatacccaaa 223  Q
    ||||||||||||||||||||||||||||||||    
T  3920578 atataggtacccaccccgaacccatacccaaa 3920547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 139 - 244
Target Start/End: Original strand, 8906589 - 8906694
Alignment:
Q  139 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgta 238  Q
    |||||||| |||||||| ||||| |||||||| ||| || || | |||| ||| |||| |||||||||||||||||||| ||| ||  |||| |||||||    
T  8906589 tgggtttgagttttctccgatttcaaaacacgagtatgagacgaataacggggttatatgtacccaccccgaacccatatccatacctgttccaaatgta 8906688  T
Q  239 gaaaat 244  Q
     |||||    
T  8906689 aaaaat 8906694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 139 - 244
Target Start/End: Original strand, 27850326 - 27850431
Alignment:
Q  139 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgta 238  Q
    ||||| ||||||||| | ||||| |||||||||||| |  ||  ||||| ||  |||||||||||| ||||||||||||||||||| ||| |  ||||||    
T  27850326 tgggtatgggttttccccgatttcaaaacacgggtatgggacgggtaacgggtgtataggtacccatcccgaacccatacccaaacccgtcccgaatgta 27850425  T
Q  239 gaaaat 244  Q
    ||||||    
T  27850426 gaaaat 27850431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 140 - 256
Target Start/End: Complemental strand, 4101634 - 4101518
Alignment:
Q  140 gggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtag 239  Q
    ||||||||||||||  |||||| ||||||| |||||   |   || || |||||||| ||||||| || |||||||||||| ||| ||| || ||||| |    
T  4101634 gggtttgggttttccatgatttcaaaacacaggtacaggatgggttacagggatatatgtacccatcctgaacccataccctaacccgtcctgaatgttg 4101535  T
Q  240 aaaatcaatttattacc 256  Q
    |||||||||||||||||    
T  4101534 aaaatcaatttattacc 4101518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 183 - 243
Target Start/End: Complemental strand, 45380156 - 45380096
Alignment:
Q  183 gtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaa 243  Q
    ||||| || |||||||||||||||||||||||||||| |||||||| | ||||||| ||||    
T  45380156 gtaacgggtatataggtacccaccccgaacccatacctaaactcgtcccaaatgtaaaaaa 45380096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 139 - 218
Target Start/End: Original strand, 3226946 - 3227025
Alignment:
Q  139 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatac 218  Q
    ||||| ||||||||| | ||||| |||||||||||| |  ||  ||||| || |||||||||||||||||||||||||||    
T  3226946 tgggtatgggttttccccgatttcaaaacacgggtatgggacgggtaacaggaatataggtacccaccccgaacccatac 3227025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 141 - 224
Target Start/End: Complemental strand, 31426099 - 31426016
Alignment:
Q  141 ggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaac 224  Q
    ||||||||||||| | ||||| |||| ||||||| || ||  ||||| |||||||| ||| ||||||||||| |||||||||||    
T  31426099 ggtttgggttttccccgatttaaaaatacgggtatgagacgggtaacggggatatatgtatccaccccgaacgcatacccaaac 31426016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 145 - 228
Target Start/End: Complemental strand, 48327532 - 48327449
Alignment:
Q  145 tgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgt 228  Q
    ||||||||||| ||||| |||| |||||||||  |  ||||| ||||||||||||| ||||| ||||| ||||| |||||||||    
T  48327532 tgggttttctccgatttcaaaatacgggtacggtatgagtaattgggatataggtatccacctcgaacacatactcaaactcgt 48327449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 190 - 256
Target Start/End: Complemental strand, 3774111 - 3774045
Alignment:
Q  190 ggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaatcaatttattacc 256  Q
    |||||||||||||||||| |||||||||| ||||  ||| |  ||| ||||||||||||||||||||    
T  3774111 ggatataggtacccaccctgaacccatactcaaatccgtcccgaatttagaaaatcaatttattacc 3774045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 142 - 228
Target Start/End: Complemental strand, 16079103 - 16079017
Alignment:
Q  142 gtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgt 228  Q
    |||||||||||||| ||| | |||||||||||| |  ||  ||||| || |||||||| |||||||| |||| ||||||||||||||    
T  16079103 gtttgggttttctccgatctcaaaacacgggtatgggacgggtaacgggtatataggtgcccaccccaaacctatacccaaactcgt 16079017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 142 - 223
Target Start/End: Complemental strand, 5377175 - 5377094
Alignment:
Q  142 gtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaa 223  Q
    |||||||||||| | ||||| ||||||| |||| |  ||  ||||  || ||||||||||||||||||||||||||||||||    
T  5377175 gtttgggttttccccgatttcaaaacacaggtatgggacgggtaaagggtatataggtacccaccccgaacccatacccaaa 5377094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 139 - 224
Target Start/End: Complemental strand, 12980470 - 12980385
Alignment:
Q  139 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaac 224  Q
    ||||||| ||||||| | ||||| |||||||||||| |  ||  ||||  || ||||| |||||||||||||||||||||||||||    
T  12980470 tgggttttggttttccccgatttcaaaacacgggtatgggacgggtaatgggtatataagtacccaccccgaacccatacccaaac 12980385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 139 - 244
Target Start/End: Complemental strand, 17885558 - 17885453
Alignment:
Q  139 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgta 238  Q
    ||||| ||||||||| | |||||||||||| ||||| |  ||  ||||| || |||||||| || |||||||||||||||||| || ||| | |||||||    
T  17885558 tgggtatgggttttccccgattttaaaacatgggtatgggacgggtaacgggtatataggttccaaccccgaacccatacccatacccgtcccaaatgta 17885459  T
Q  239 gaaaat 244  Q
     |||||    
T  17885458 aaaaat 17885453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 139 - 224
Target Start/End: Complemental strand, 18684067 - 18683982
Alignment:
Q  139 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaac 224  Q
    |||||| |||||||| | ||||| |||| |||||||||  ||  ||||| |||||||| ||| ||||| |||||||||||||||||    
T  18684067 tgggttcgggttttccccgatttcaaaatacgggtacgggacgggtaacagggatatatgtatccacctcgaacccatacccaaac 18683982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 142 - 219
Target Start/End: Original strand, 25782910 - 25782987
Alignment:
Q  142 gtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacc 219  Q
    |||||||||||||| |||| ||||||||||||| || ||   |||  || ||||||||||||||||||||| ||||||    
T  25782910 gtttgggttttctccgattataaaacacgggtatgagacggataatgggtatataggtacccaccccgaactcatacc 25782987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 183 - 244
Target Start/End: Complemental strand, 30650680 - 30650619
Alignment:
Q  183 gtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaat 244  Q
    ||||| || ||||||||||||||||||||||||||||||||  ||| | ||||||| |||||    
T  30650680 gtaacgggtatataggtacccaccccgaacccatacccaaatccgtcccaaatgtaaaaaat 30650619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 139 - 244
Target Start/End: Complemental strand, 38152980 - 38152875
Alignment:
Q  139 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgta 238  Q
    ||||| ||||||||| | ||||| |||||| ||||| | |||   |||| |  |||||||||||||||||||||||||||| |||| ||| | |||||||    
T  38152980 tgggtatgggttttccccgatttcaaaacatgggtatggaacggataacggctatataggtacccaccccgaacccatacctaaacccgtcccaaatgta 38152881  T
Q  239 gaaaat 244  Q
     |||||    
T  38152880 aaaaat 38152875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 139 - 244
Target Start/End: Complemental strand, 41103749 - 41103644
Alignment:
Q  139 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgta 238  Q
    ||||| ||||||||| | ||||| |||||||||||| |  ||   |||| || ||||| |||||||||||||||||||||  |||| ||| |||||||||    
T  41103749 tgggtatgggttttccccgatttcaaaacacgggtatgggacggttaacgggtatataagtacccaccccgaacccatacataaacccgtcctaaatgta 41103650  T
Q  239 gaaaat 244  Q
     |||||    
T  41103649 aaaaat 41103644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 238
Target Start/End: Original strand, 10995837 - 10995933
Alignment:
Q  142 gtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgta 238  Q
    |||||||||||| | ||||| || ||||||||| |  ||  ||||| ||| ||||  ||||||||||||||||||||||| || ||||| |||||||    
T  10995837 gtttgggttttccccgatttcaagacacgggtatgggacgggtaacagggttatatatacccaccccgaacccatacccatacccgttccaaatgta 10995933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 183 - 243
Target Start/End: Original strand, 18125272 - 18125332
Alignment:
Q  183 gtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaa 243  Q
    ||||| || ||||||||||||||||||||| ||||||||||| ||| | ||||||| ||||    
T  18125272 gtaacgggtatataggtacccaccccgaacgcatacccaaacccgtcccaaatgtaaaaaa 18125332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 183 - 243
Target Start/End: Complemental strand, 21702708 - 21702648
Alignment:
Q  183 gtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaa 243  Q
    ||||| || ||||||||||||||||||||||||||||| ||| ||| | ||||||| ||||    
T  21702708 gtaacgggtatataggtacccaccccgaacccataccccaacccgtcccaaatgtaaaaaa 21702648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 139 - 256
Target Start/End: Complemental strand, 29292797 - 29292678
Alignment:
Q  139 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtac--ccaccccgaacccatacccaaactcgttctaaatg 236  Q
    ||||| ||| ||||| | ||||| ||||||||||||||| |   |||||  ||||||||||||  ||||||  |||||||||| ||||||||    ||||    
T  29292797 tgggtatggattttccccgatttcaaaacacgggtacgagatgggtaacatggatataggtacgcccaccctaaacccatacctaaactcgtctcgaatg 29292698  T
Q  237 tagaaaatcaatttattacc 256  Q
    ||||||||||||||| ||||    
T  29292697 tagaaaatcaatttactacc 29292678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 145 - 244
Target Start/End: Complemental strand, 43507532 - 43507433
Alignment:
Q  145 tgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaat 244  Q
    ||||||||| | ||||| |||||| ||||| || ||  ||||| || ||||||| |||||||| ||||||||||| | |||||| | ||||||| |||||    
T  43507532 tgggttttccccgatttcaaaacatgggtatgagacgggtaacgggtatataggcacccaccctgaacccatacctatactcgtcccaaatgtaaaaaat 43507433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 192 - 238
Target Start/End: Complemental strand, 7780048 - 7780002
Alignment:
Q  192 atataggtacccaccccgaacccatacccaaactcgttctaaatgta 238  Q
    |||||||||||||||||||||| |||||||||| ||| | |||||||    
T  7780048 atataggtacccaccccgaacctatacccaaacccgtcccaaatgta 7780002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 139 - 224
Target Start/End: Original strand, 2630574 - 2630658
Alignment:
Q  139 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaac 224  Q
    ||||||||||||||| | ||||| |||||| ||||| |  ||  || || || |||||| ||||||||||||||||||||||||||    
T  2630574 tgggtttgggttttccccgattt-aaaacatgggtatgggacgggtgacgggtatatagatacccaccccgaacccatacccaaac 2630658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 92 - 149
Target Start/End: Complemental strand, 17852004 - 17851947
Alignment:
Q  92 tacccgcccaaaccaatcccaatttgacggatttccttcgcttttactgggtttgggt 149  Q
    ||||||||| |||||| |||||||||| |||||| || || ||| |||||||||||||    
T  17852004 tacccgcccgaaccaaacccaatttgatggattttctccgttttgactgggtttgggt 17851947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 139 - 224
Target Start/End: Complemental strand, 22973481 - 22973396
Alignment:
Q  139 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaac 224  Q
    |||||||||||||||   ||||| |||| |||||||||  ||  ||||  |||||||  ||||||||| |||||||||||||||||    
T  22973481 tgggtttgggttttccacgatttcaaaatacgggtacgggacgggtaatggggatatctgtacccacctcgaacccatacccaaac 22973396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 95 - 224
Target Start/End: Complemental strand, 28309629 - 28309500
Alignment:
Q  95 ccgcccaaaccaatcccaatttgacggatttccttcgcttttactgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggata 194  Q
    ||||||||||||| ||| |||||| |  ||| | ||| |||  || |||||||||| || ||||||| |||| |||||||||  ||  ||||| || |||    
T  28309629 ccgcccaaaccaaccccgatttgatgagttttcctcgatttgtctaggtttgggttctccctgatttcaaaatacgggtacgggacgggtaacgggaata 28309530  T
Q  195 taggtacccaccccgaacccatacccaaac 224  Q
    || ||| | ||||||||| |||||||||||    
T  28309529 tatgtatctaccccgaactcatacccaaac 28309500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 192 - 224
Target Start/End: Complemental strand, 17851894 - 17851862
Alignment:
Q  192 atataggtacccaccccgaacccatacccaaac 224  Q
    ||||||||||||| |||||||||||||||||||    
T  17851894 atataggtacccatcccgaacccatacccaaac 17851862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 192 - 244
Target Start/End: Original strand, 37196051 - 37196103
Alignment:
Q  192 atataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaat 244  Q
    |||||| ||||||||||||| |||||||||||| |||  |||||||| |||||    
T  37196051 atatagctacccaccccgaatccatacccaaacccgtcataaatgtaaaaaat 37196103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 223
Target Start/End: Complemental strand, 37579311 - 37579271
Alignment:
Q  183 gtaactgggatataggtacccaccccgaacccatacccaaa 223  Q
    ||||| || |||||||||||||||||||||| |||||||||    
T  37579311 gtaacgggtatataggtacccaccccgaacctatacccaaa 37579271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 196 - 224
Target Start/End: Original strand, 44794084 - 44794112
Alignment:
Q  196 aggtacccaccccgaacccatacccaaac 224  Q
    |||||||||||||||||||||||||||||    
T  44794084 aggtacccaccccgaacccatacccaaac 44794112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 192 - 244
Target Start/End: Original strand, 45885818 - 45885870
Alignment:
Q  192 atataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaat 244  Q
    |||||||||||||||||||||||||||| |||  ||| | ||||||| |||||    
T  45885818 atataggtacccaccccgaacccataccaaaatccgtcccaaatgtaaaaaat 45885870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 139 - 228
Target Start/End: Complemental strand, 33481 - 33392
Alignment:
Q  139 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgt 228  Q
    ||||||||||||||| | ||||| |||||||||||| |  ||  ||||| || ||||| |||||||||||||||||||||||||||||||    
T  33481 tgggtttgggttttccccgatttcaaaacacgggtatgggacgggtaacgggtatatatgtacccaccccgaacccatacccaaactcgt 33392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 36)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 142 - 256
Target Start/End: Original strand, 30904819 - 30904932
Alignment:
Q  142 gtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaa 241  Q
    |||||| |||| |||||||| ||||||||||||||  ||  ||| | |||||||||||||||||||||||||||||||||||  |||    ||||||| |    
T  30904819 gtttggcttttttctgatttcaaaacacgggtacgggacgggta-cggggatataggtacccaccccgaacccatacccaaatccgtctcgaatgtagga 30904917  T
Q  242 aatcaatttattacc 256  Q
    |||||||||| ||||    
T  30904918 aatcaatttactacc 30904932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 158 - 244
Target Start/End: Original strand, 48305660 - 48305746
Alignment:
Q  158 attttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaat 244  Q
    |||| |||||||||||| | ||| |||| | || |||||||||||||||||||||| |||||||||| ||||| ||||||| |||||    
T  48305660 atttcaaaacacgggtatggaacgagtatcgggtatataggtacccaccccgaacctatacccaaacccgttccaaatgtaaaaaat 48305746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 183 - 244
Target Start/End: Complemental strand, 44639318 - 44639257
Alignment:
Q  183 gtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaat 244  Q
    ||||| || ||||||||||||||||||||||||||||||||| ||||| ||||||| |||||    
T  44639318 gtaacgggtatataggtacccaccccgaacccatacccaaacccgttccaaatgtaaaaaat 44639257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 183 - 244
Target Start/End: Complemental strand, 52198199 - 52198138
Alignment:
Q  183 gtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaat 244  Q
    ||||| || ||||||||||||||||||||||||||||||||| ||||| ||||||| |||||    
T  52198199 gtaacgggtatataggtacccaccccgaacccatacccaaacccgttccaaatgtaaaaaat 52198138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 139 - 228
Target Start/End: Complemental strand, 53631992 - 53631903
Alignment:
Q  139 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgt 228  Q
    |||||||| |||||| |  ||||||||||||| ||| || ||  ||||| || ||||||||||||||||||||||||||| |||||||||    
T  53631992 tgggtttgagttttcccaaattttaaaacacgtgtatgagacgggtaacgggtatataggtacccaccccgaacccatactcaaactcgt 53631903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 183 - 243
Target Start/End: Original strand, 23546986 - 23547046
Alignment:
Q  183 gtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaa 243  Q
    ||||| || ||||||||||||||||||||||||||||||||||||| | ||||||| ||||    
T  23546986 gtaacgggtatataggtacccaccccgaacccatacccaaactcgtcccaaatgtaaaaaa 23547046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 157 - 223
Target Start/End: Complemental strand, 34119726 - 34119660
Alignment:
Q  157 gattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaa 223  Q
    |||||||||||||||||| || ||   |||| || ||||||||||||||||||||||||||||||||    
T  34119726 gattttaaaacacgggtatgagacggataacaggtatataggtacccaccccgaacccatacccaaa 34119660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 139 - 228
Target Start/End: Original strand, 4016044 - 4016133
Alignment:
Q  139 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgt 228  Q
    ||||||||||||||| | ||||| |||||| ||||| |  ||   |||| || |||||||||||||| ||||||||||||||||||||||    
T  4016044 tgggtttgggttttccccgatttcaaaacatgggtatgggacggataacgggtatataggtacccactccgaacccatacccaaactcgt 4016133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 139 - 244
Target Start/End: Complemental strand, 44172714 - 44172609
Alignment:
Q  139 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgta 238  Q
    ||||| ||||||||| | ||| | |||||||||||| |  ||  ||||| || ||||| ||||||||||||||||||||||||||| ||| | |||||||    
T  44172714 tgggtatgggttttccccgatctcaaaacacgggtatgggacgggtaacgggtatataagtacccaccccgaacccatacccaaacccgtcccaaatgta 44172615  T
Q  239 gaaaat 244  Q
     |||||    
T  44172614 aaaaat 44172609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 139 - 244
Target Start/End: Complemental strand, 44179414 - 44179309
Alignment:
Q  139 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgta 238  Q
    ||||| ||||||||| | ||| | |||||||||||| |  ||  ||||| || ||||| ||||||||||||||||||||||||||| ||| | |||||||    
T  44179414 tgggtatgggttttccccgatctcaaaacacgggtatgggacgggtaacgggtatataagtacccaccccgaacccatacccaaacccgtcccaaatgta 44179315  T
Q  239 gaaaat 244  Q
     |||||    
T  44179314 aaaaat 44179309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 98 - 256
Target Start/End: Original strand, 772756 - 772911
Alignment:
Q  98 cccaaaccaatcccaatttgacggatttccttcgcttttactgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatatag 197  Q
    |||||||||| |||||||||||| |||| | ||  ||| ||||||||| |||||||   |||| ||||||||   || |  ||| ||||| ||||||||     
T  772756 cccaaaccaaacccaatttgacgaattttcctcattttgactgggtttaggttttc---gattgtaaaacacaaatatgggacaggtaacagggatatat 772852  T
Q  198 gtacccaccccgaacccatacccaaactcgttctaaatgtagaaaatcaatttattacc 256  Q
     |||||||||||||| ||| ||||||   || | |||| ||||||||||||||||||||    
T  772853 ctacccaccccgaactcatgcccaaatatgtcccaaatatagaaaatcaatttattacc 772911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 139 - 243
Target Start/End: Complemental strand, 34154502 - 34154398
Alignment:
Q  139 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgta 238  Q
    ||||| || |||||| | ||||| |||||| ||||| |||||  |||||  | |||||||||||||||||||||||||||||| || ||| | |||||||    
T  34154502 tgggtatgtgttttccccgatttcaaaacatgggtatgaaacgggtaacaagaatataggtacccaccccgaacccatacccatacccgtcccaaatgta 34154403  T
Q  239 gaaaa 243  Q
     ||||    
T  34154402 aaaaa 34154398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 139 - 238
Target Start/End: Original strand, 7469778 - 7469877
Alignment:
Q  139 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgta 238  Q
    ||||| ||||||||| ||||| |  ||||||||||| |  ||  ||||| || ||||||||||||||||||||||||||| ||||| ||| | |||||||    
T  7469778 tgggtatgggttttccctgatctcgaaacacgggtatgggacgggtaacgggtatataggtacccaccccgaacccatacacaaacccgtcccaaatgta 7469877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 157 - 218
Target Start/End: Complemental strand, 29842378 - 29842317
Alignment:
Q  157 gattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatac 218  Q
    |||||||||||||||||| |  ||  ||||| || |||||||||||||||||||||||||||    
T  29842378 gattttaaaacacgggtatgggactggtaacgggaatataggtacccaccccgaacccatac 29842317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 183 - 224
Target Start/End: Original strand, 31271301 - 31271342
Alignment:
Q  183 gtaactgggatataggtacccaccccgaacccatacccaaac 224  Q
    |||||||||||||||||||||||||||||| ||||| |||||    
T  31271301 gtaactgggatataggtacccaccccgaactcatactcaaac 31271342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 139 - 224
Target Start/End: Original strand, 39655273 - 39655358
Alignment:
Q  139 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaac 224  Q
    ||||| ||||||||| | ||| | |||||||||||| |  ||  ||||| || ||||||||||||||||| |||||||||||||||    
T  39655273 tgggtatgggttttccccgatctcaaaacacgggtatgggacgggtaacaggtatataggtacccaccccaaacccatacccaaac 39655358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 183 - 244
Target Start/End: Complemental strand, 39728715 - 39728654
Alignment:
Q  183 gtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaat 244  Q
    ||||| || ||||| ||||||||||||||||||||||||||| ||| | ||||||| |||||    
T  39728715 gtaacgggtatataagtacccaccccgaacccatacccaaacccgtcccaaatgtaaaaaat 39728654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 183 - 224
Target Start/End: Complemental strand, 44252791 - 44252750
Alignment:
Q  183 gtaactgggatataggtacccaccccgaacccatacccaaac 224  Q
    ||||| || |||||||||||||||||||||||||||||||||    
T  44252791 gtaacaggtatataggtacccaccccgaacccatacccaaac 44252750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 139 - 223
Target Start/End: Original strand, 4557305 - 4557389
Alignment:
Q  139 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaa 223  Q
    ||||||||||||||| | | ||| |||||| ||||| |  ||  |||||  | ||||||||||||||||||||||||||||||||    
T  4557305 tgggtttgggttttccccgttttcaaaacatgggtatgggacgggtaacgagtatataggtacccaccccgaacccatacccaaa 4557389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 158 - 221
Target Start/End: Complemental strand, 23580896 - 23580833
Alignment:
Q  158 attttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccataccca 221  Q
    |||| |||||||| ||| |||||  ||||| || |||||||||||||| |||||||||||||||    
T  23580896 atttcaaaacacgagtatgaaacgggtaacgggtatataggtacccactccgaacccataccca 23580833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 192 - 243
Target Start/End: Original strand, 31126848 - 31126899
Alignment:
Q  192 atataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaa 243  Q
    ||||||||| ||||||||||| ||||||||||||||| | ||||| ||||||    
T  31126848 atataggtatccaccccgaactcatacccaaactcgtcccaaatgcagaaaa 31126899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 137 - 244
Target Start/End: Complemental strand, 49025770 - 49025664
Alignment:
Q  137 actgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatg 236  Q
    ||||||||||||||||| | ||| | |||||||||||| |  ||  ||||| || |||||||||| || || |||||||||||||||| ||| | |||||    
T  49025770 actgggtttgggttttccccgatctcaaaacacgggtatgggacgggtaacaggtatataggtacacatcc-gaacccatacccaaacccgtcccaaatg 49025672  T
Q  237 tagaaaat 244  Q
    || |||||    
T  49025671 taaaaaat 49025664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 221
Target Start/End: Original strand, 10043282 - 10043364
Alignment:
Q  139 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccataccca 221  Q
    ||||||||||||||| ||| ||| |||||| ||||| |  ||  ||||| ||| |||| | ||||||||||||||||||||||    
T  10043282 tgggtttgggttttccctggtttcaaaacatgggtatgggacgggtaacggggttatatgcacccaccccgaacccataccca 10043364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 214 - 256
Target Start/End: Complemental strand, 42243400 - 42243358
Alignment:
Q  214 catacccaaactcgttctaaatgtagaaaatcaatttattacc 256  Q
    ||||||||||| | | |||||||||||||||||||||||||||    
T  42243400 catacccaaacccatcctaaatgtagaaaatcaatttattacc 42243358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 221
Target Start/End: Original strand, 48390817 - 48390899
Alignment:
Q  139 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccataccca 221  Q
    ||||| ||||||||| | ||||| |||||||||||| |  ||  ||||| || ||||||||||||| || |||||||||||||    
T  48390817 tgggtatgggttttccccgatttcaaaacacgggtatgggacgggtaacgggaatataggtacccatcctgaacccataccca 48390899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 158 - 251
Target Start/End: Original strand, 3385875 - 3385968
Alignment:
Q  158 attttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaatcaattta 251  Q
    |||| ||||||||||||||  ||| |||||  ||||||||||| ||||| |||| ||||||| |||| ||| |  |||||| ||||||| ||||    
T  3385875 atttcaaaacacgggtacgggacaggtaacgaggatataggtagccaccacgaatccataccaaaacccgtacctaatgtaaaaaatcatttta 3385968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 183 - 244
Target Start/End: Original strand, 22535885 - 22535946
Alignment:
Q  183 gtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaat 244  Q
    ||||| || ||| ||| ||||||||||||||||||| || |||||| ||||||||| |||||    
T  22535885 gtaacgggtatacaggcacccaccccgaacccatacacatactcgtcctaaatgtaaaaaat 22535946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 183 - 224
Target Start/End: Complemental strand, 29284380 - 29284339
Alignment:
Q  183 gtaactgggatataggtacccaccccgaacccatacccaaac 224  Q
    ||||| || ||||||||||||| |||||||||||||||||||    
T  29284380 gtaacgggtatataggtacccagcccgaacccatacccaaac 29284339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 92 - 149
Target Start/End: Complemental strand, 29284483 - 29284426
Alignment:
Q  92 tacccgcccaaaccaatcccaatttgacggatttccttcgcttttactgggtttgggt 149  Q
    ||||||||| |||||| ||||||||||||| ||| || || ||| |||||||||||||    
T  29284483 tacccgcccgaaccaaacccaatttgacgggttttctccgttttgactgggtttgggt 29284426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 189 - 254
Target Start/End: Complemental strand, 40890384 - 40890319
Alignment:
Q  189 gggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaatcaatttatta 254  Q
    |||||||| ||| | || |||||||||||||||| ||| |   |||||||||||||||||||||||    
T  40890384 gggatataagtatctacgccgaacccatacccaagctcatctcaaatgtagaaaatcaatttatta 40890319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 139 - 244
Target Start/End: Complemental strand, 49580152 - 49580047
Alignment:
Q  139 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgta 238  Q
    ||||| ||||||||| | ||| | |||||||||||| |  ||  |||||  | ||||||||||||||| ||||||||||| ||||| ||| | |||||||    
T  49580152 tgggtatgggttttccccgatctcaaaacacgggtatgggacgggtaacgagtatataggtacccacctcgaacccatactcaaacccgtcccaaatgta 49580053  T
Q  239 gaaaat 244  Q
     |||||    
T  49580052 aaaaat 49580047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 183 - 224
Target Start/End: Complemental strand, 54317188 - 54317147
Alignment:
Q  183 gtaactgggatataggtacccaccccgaacccatacccaaac 224  Q
    ||||| || ||||||||||||||||||||||||| |||||||    
T  54317188 gtaacgggtatataggtacccaccccgaacccattcccaaac 54317147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 89 - 125
Target Start/End: Original strand, 1772337 - 1772373
Alignment:
Q  89 gggtacccgcccaaaccaatcccaatttgacggattt 125  Q
    ||||||| ||||||||||||||| |||||||||||||    
T  1772337 gggtacctgcccaaaccaatcccgatttgacggattt 1772373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 198 - 242
Target Start/End: Complemental strand, 2487824 - 2487780
Alignment:
Q  198 gtacccaccccgaacccatacccaaactcgttctaaatgtagaaa 242  Q
    ||||||||||||||||||||||||||| |   |||||||||||||    
T  2487824 gtacccaccccgaacccatacccaaaccctacctaaatgtagaaa 2487780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 89 - 149
Target Start/End: Original strand, 10043220 - 10043280
Alignment:
Q  89 gggtacccgcccaaaccaatcccaatttgacggatttccttcgcttttactgggtttgggt 149  Q
    ||||||||| ||| ||||| ||||||||||||| ||| || | |||| |||||||||||||    
T  10043220 gggtacccgaccataccaaccccaatttgacgggttttctccactttgactgggtttgggt 10043280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 243
Target Start/End: Original strand, 44953435 - 44953539
Alignment:
Q  139 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgta 238  Q
    ||||| ||||||||| | ||| | |||||||||||| |  ||  ||||| || |||||||||| |||||||||| ||||| ||||| ||| | |||||||    
T  44953435 tgggtatgggttttccccgatctcaaaacacgggtatgggacgggtaacgggtatataggtactcaccccgaactcatactcaaacccgtcccaaatgta 44953534  T
Q  239 gaaaa 243  Q
     ||||    
T  44953535 aaaaa 44953539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 142 - 224
Target Start/End: Complemental strand, 3054 - 2972
Alignment:
Q  142 gtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaac 224  Q
    |||||||||||| | ||||| |||| ||||||||   ||   ||||||||||||| ||||||||||||||||||||| |||||    
T  3054 gtttgggttttccccgatttcaaaatacgggtacaggacggataactgggatatatgtacccaccccgaacccatactcaaac 2972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 139 - 244
Target Start/End: Complemental strand, 90685 - 90580
Alignment:
Q  139 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgta 238  Q
    ||||| ||||||||| | ||||| |||||||||||| || ||   |||| || |||| ||||||| |||||||||||||| |||| |||| || |||| |    
T  90685 tgggtatgggttttccccgatttcaaaacacgggtatgagacggttaacgggtatattggtaccctccccgaacccatacacaaattcgtcctgaatgca 90586  T
Q  239 gaaaat 244  Q
    ||||||    
T  90585 gaaaat 90580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 34; Significance: 0.0000000004; HSPs: 2)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 183 - 224
Target Start/End: Original strand, 105513 - 105554
Alignment:
Q  183 gtaactgggatataggtacccaccccgaacccatacccaaac 224  Q
    ||||| |||||||| |||||||||||||||||||||||||||    
T  105513 gtaacagggatatatgtacccaccccgaacccatacccaaac 105554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 189 - 224
Target Start/End: Original strand, 128171 - 128206
Alignment:
Q  189 gggatataggtacccaccccgaacccatacccaaac 224  Q
    |||||||| |||||||||||||||||||||||||||    
T  128171 gggatatatgtacccaccccgaacccatacccaaac 128206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0294 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 192 - 244
Target Start/End: Complemental strand, 14810 - 14758
Alignment:
Q  192 atataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaat 244  Q
    |||||||||||||||  |||| ||||||||||||||| | |||||||||||||    
T  14810 atataggtacccaccttgaacacatacccaaactcgtcccaaatgtagaaaat 14758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0198 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0198
Description:

Target: scaffold0198; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 189 - 254
Target Start/End: Original strand, 20789 - 20854
Alignment:
Q  189 gggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaatcaatttatta 254  Q
    ||||||||  || ||||| ||||||||||| ||||| |||||  |||||| |||||||||||||||    
T  20789 gggatataaatatccacctcgaacccatactcaaacccgttccgaatgtaaaaaatcaatttatta 20854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 183 - 224
Target Start/End: Original strand, 55941 - 55982
Alignment:
Q  183 gtaactgggatataggtacccaccccgaacccatacccaaac 224  Q
    ||||| |||||||| |||||||||||||| ||||||||||||    
T  55941 gtaacagggatatatgtacccaccccgaatccatacccaaac 55982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 191 - 256
Target Start/End: Original strand, 107443 - 107508
Alignment:
Q  191 gatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaatcaatttattacc 256  Q
    |||||| ||||||||||||||| ||||  |||||||||||  ||||| |||||| | |||||||||    
T  107443 gatataagtacccaccccgaactcatattcaaactcgttccgaatgttgaaaattactttattacc 107508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 30; Significance: 0.00000009; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 139 - 224
Target Start/End: Complemental strand, 67837 - 67752
Alignment:
Q  139 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaac 224  Q
    ||||||||| ||||| | |||||||||| |||| ||||  ||   |||| |||||||| ||||||||||||| || ||||||||||    
T  67837 tgggtttggattttccccgattttaaaatacggatacgggacggataacggggatatatgtacccaccccgagcctatacccaaac 67752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 139 - 224
Target Start/End: Complemental strand, 75680 - 75595
Alignment:
Q  139 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaac 224  Q
    ||||||||| ||||| | |||||||||| |||| ||||  ||   |||| |||||||| ||||||||||||| || ||||||||||    
T  75680 tgggtttggattttccccgattttaaaatacggatacgggacggataacggggatatatgtacccaccccgagcctatacccaaac 75595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University