View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3173_high_103 (Length: 246)

Name: NF3173_high_103
Description: NF3173
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3173_high_103
NF3173_high_103
[»] chr8 (54 HSPs)
chr8 (123-234)||(13428579-13428690)
chr8 (123-234)||(1323614-1323725)
chr8 (123-234)||(38550522-38550633)
chr8 (123-234)||(27472819-27472928)
chr8 (123-215)||(41681860-41681952)
chr8 (126-198)||(26219347-26219419)
chr8 (126-198)||(20046639-20046711)
chr8 (126-198)||(20983194-20983266)
chr8 (4-114)||(23659379-23659489)
chr8 (110-207)||(22259548-22259645)
chr8 (123-216)||(23669179-23669272)
chr8 (126-215)||(29764012-29764101)
chr8 (126-198)||(26225751-26225823)
chr8 (126-198)||(39833466-39833538)
chr8 (123-215)||(21580415-21580509)
chr8 (5-113)||(18833535-18833643)
chr8 (123-207)||(19127724-19127808)
chr8 (123-207)||(42266791-42266875)
chr8 (8-81)||(1327050-1327123)
chr8 (123-207)||(20179729-20179813)
chr8 (123-215)||(22206941-22207033)
chr8 (123-207)||(39695812-39695896)
chr8 (5-112)||(19808402-19808509)
chr8 (123-193)||(5083526-5083596)
chr8 (5-114)||(17461092-17461201)
chr8 (5-113)||(16402042-16402150)
chr8 (5-87)||(23914036-23914118)
chr8 (7-113)||(37515678-37515784)
chr8 (5-114)||(19278404-19278513)
chr8 (189-234)||(19801881-19801926)
chr8 (5-114)||(21976791-21976900)
chr8 (5-114)||(23409767-23409876)
chr8 (5-89)||(21972706-21972790)
chr8 (5-87)||(21828135-21828217)
chr8 (31-112)||(19880091-19880172)
chr8 (5-114)||(22238059-22238167)
chr8 (33-114)||(23478341-23478422)
chr8 (5-114)||(43251689-43251798)
chr8 (22-114)||(22111807-22111899)
chr8 (5-87)||(18862766-18862848)
chr8 (5-87)||(21410853-21410935)
chr8 (5-87)||(21805345-21805427)
chr8 (123-207)||(31723945-31724028)
chr8 (31-114)||(26453971-26454054)
chr8 (123-207)||(18303050-18303134)
chr8 (123-179)||(36728525-36728581)
chr8 (5-60)||(14397902-14397957)
chr8 (123-198)||(22319152-22319226)
chr8 (196-234)||(27472955-27472993)
chr8 (31-87)||(8414418-8414474)
chr8 (31-87)||(11775010-11775066)
chr8 (123-159)||(20084750-20084786)
chr8 (123-179)||(22244199-22244255)
chr8 (110-162)||(25849680-25849732)
[»] scaffold0116 (1 HSPs)
scaffold0116 (123-234)||(44321-44432)
[»] chr7 (75 HSPs)
chr7 (123-234)||(14270571-14270682)
chr7 (127-234)||(8467977-8468084)
chr7 (123-234)||(45848160-45848271)
chr7 (123-231)||(17232105-17232213)
chr7 (8-114)||(8468689-8468795)
chr7 (123-215)||(30822051-30822143)
chr7 (31-117)||(17232887-17232973)
chr7 (5-114)||(15112915-15113024)
chr7 (126-198)||(10064266-10064338)
chr7 (123-215)||(14162120-14162212)
chr7 (126-198)||(18423317-18423389)
chr7 (123-215)||(18876084-18876176)
chr7 (123-215)||(36686436-36686528)
chr7 (123-215)||(48811562-48811654)
chr7 (5-114)||(15116452-15116561)
chr7 (5-114)||(16998564-16998673)
chr7 (123-216)||(43277979-43278072)
chr7 (141-215)||(12757354-12757428)
chr7 (126-198)||(18639874-18639946)
chr7 (126-198)||(37728106-37728178)
chr7 (8-81)||(14270069-14270142)
chr7 (5-114)||(14273486-14273595)
chr7 (5-114)||(16324023-16324131)
chr7 (5-114)||(46580715-46580824)
chr7 (123-207)||(19281811-19281895)
chr7 (123-207)||(47093898-47093982)
chr7 (141-215)||(16458678-16458752)
chr7 (5-114)||(8940221-8940330)
chr7 (110-207)||(13150800-13150897)
chr7 (5-114)||(14258422-14258531)
chr7 (5-114)||(32301259-32301368)
chr7 (126-198)||(6170671-6170743)
chr7 (123-207)||(12371035-12371119)
chr7 (123-215)||(17071448-17071540)
chr7 (123-207)||(36705869-36705953)
chr7 (123-207)||(44373706-44373790)
chr7 (123-207)||(44382571-44382655)
chr7 (135-198)||(15439258-15439321)
chr7 (123-193)||(13699914-13699984)
chr7 (5-114)||(13918565-13918674)
chr7 (5-114)||(15719967-15720076)
chr7 (5-113)||(1858871-1858979)
chr7 (123-207)||(11066159-11066243)
chr7 (16-114)||(2530187-2530284)
chr7 (5-114)||(32983-33092)
chr7 (5-114)||(12704780-12704889)
chr7 (5-114)||(12714740-12714849)
chr7 (5-114)||(12718544-12718653)
chr7 (5-114)||(16460805-16460914)
chr7 (5-114)||(16579730-16579839)
chr7 (5-114)||(16585824-16585933)
chr7 (5-114)||(16907322-16907431)
chr7 (5-114)||(18279279-18279388)
chr7 (5-114)||(18283242-18283351)
chr7 (5-114)||(25927288-25927397)
chr7 (123-207)||(13133725-13133808)
chr7 (123-207)||(14220287-14220371)
chr7 (123-207)||(15120552-15120636)
chr7 (5-109)||(17060464-17060568)
chr7 (123-207)||(32434866-32434950)
chr7 (123-207)||(37785551-37785635)
chr7 (5-87)||(70886-70968)
chr7 (5-87)||(74995-75077)
chr7 (5-87)||(12723482-12723564)
chr7 (5-87)||(39722169-39722251)
chr7 (5-87)||(45170127-45170209)
chr7 (5-114)||(26292271-26292380)
chr7 (31-114)||(16550712-16550795)
chr7 (31-114)||(16614867-16614950)
chr7 (31-114)||(32160910-32160992)
chr7 (5-87)||(20487540-20487622)
chr7 (123-207)||(20618976-20619060)
chr7 (5-114)||(16114117-16114226)
chr7 (5-114)||(16117270-16117379)
chr7 (196-234)||(8467912-8467950)
[»] chr1 (47 HSPs)
chr1 (123-233)||(46383086-46383196)
chr1 (123-234)||(41306124-41306235)
chr1 (123-215)||(7053240-7053332)
chr1 (5-114)||(51326764-51326873)
chr1 (123-215)||(16059564-16059656)
chr1 (5-114)||(12271526-12271635)
chr1 (5-114)||(27653262-27653371)
chr1 (126-198)||(43690369-43690441)
chr1 (126-195)||(20636388-20636457)
chr1 (8-81)||(43543133-43543206)
chr1 (123-207)||(38888308-38888392)
chr1 (123-198)||(8277151-8277226)
chr1 (4-114)||(13881420-13881530)
chr1 (123-207)||(24723815-24723899)
chr1 (126-194)||(28195018-28195086)
chr1 (123-215)||(20587457-20587547)
chr1 (123-215)||(20591995-20592085)
chr1 (123-207)||(1642253-1642337)
chr1 (123-207)||(20634809-20634893)
chr1 (123-207)||(41227928-41228012)
chr1 (5-114)||(21407231-21407340)
chr1 (5-114)||(48603424-48603533)
chr1 (123-207)||(22349367-22349451)
chr1 (23-87)||(33797520-33797584)
chr1 (123-215)||(38057848-38057940)
chr1 (22-85)||(22130963-22131026)
chr1 (22-113)||(48520484-48520575)
chr1 (5-87)||(1925250-1925332)
chr1 (5-87)||(20228930-20229012)
chr1 (5-87)||(20924264-20924346)
chr1 (5-114)||(1010599-1010708)
chr1 (5-114)||(16375580-16375689)
chr1 (123-179)||(14793633-14793689)
chr1 (123-207)||(51475785-51475869)
chr1 (31-114)||(29764346-29764429)
chr1 (31-114)||(46198433-46198516)
chr1 (31-114)||(50000734-50000817)
chr1 (5-70)||(52639461-52639526)
chr1 (123-179)||(17904282-17904338)
chr1 (123-202)||(13301593-13301671)
chr1 (7-70)||(41781630-41781693)
chr1 (196-234)||(46383216-46383254)
chr1 (124-198)||(51323125-51323198)
chr1 (201-234)||(21740379-21740412)
chr1 (201-234)||(21740444-21740477)
chr1 (123-179)||(21238537-21238593)
chr1 (123-175)||(43542621-43542673)
[»] chr4 (52 HSPs)
chr4 (123-234)||(19857055-19857166)
chr4 (123-234)||(361728-361839)
chr4 (8-117)||(19857490-19857599)
chr4 (123-215)||(9637618-9637710)
chr4 (123-215)||(33244428-33244520)
chr4 (123-215)||(13037001-13037093)
chr4 (123-215)||(16296262-16296354)
chr4 (123-215)||(51992284-51992376)
chr4 (124-215)||(19435960-19436051)
chr4 (128-198)||(44773577-44773647)
chr4 (126-198)||(15355785-15355857)
chr4 (126-198)||(46642377-46642449)
chr4 (126-190)||(7641645-7641709)
chr4 (126-198)||(13844083-13844155)
chr4 (123-207)||(10357716-10357800)
chr4 (126-194)||(15189837-15189905)
chr4 (123-207)||(40229253-40229337)
chr4 (141-215)||(4859030-4859104)
chr4 (5-113)||(13591966-13592073)
chr4 (8-81)||(52873185-52873255)
chr4 (8-114)||(15497078-15497184)
chr4 (5-114)||(14746623-14746732)
chr4 (123-207)||(19734107-19734191)
chr4 (22-113)||(43256215-43256306)
chr4 (189-234)||(361662-361707)
chr4 (189-234)||(6190123-6190168)
chr4 (5-114)||(9556406-9556515)
chr4 (5-114)||(17048174-17048283)
chr4 (31-114)||(10694955-10695038)
chr4 (31-114)||(10908721-10908804)
chr4 (123-198)||(14629514-14629588)
chr4 (5-87)||(4561455-4561537)
chr4 (5-87)||(5757059-5757141)
chr4 (5-87)||(10712759-10712841)
chr4 (5-87)||(10926529-10926611)
chr4 (5-87)||(27533929-27534011)
chr4 (5-70)||(10056654-10056719)
chr4 (5-114)||(14757543-14757652)
chr4 (31-114)||(15884123-15884206)
chr4 (5-87)||(12487614-12487696)
chr4 (5-87)||(14954288-14954370)
chr4 (155-216)||(33185675-33185736)
chr4 (123-176)||(44024664-44024717)
chr4 (127-179)||(26922928-26922980)
chr4 (195-234)||(361597-361636)
chr4 (31-113)||(15008227-15008309)
chr4 (5-87)||(25689773-25689855)
chr4 (5-114)||(17810148-17810257)
chr4 (33-112)||(40619793-40619872)
chr4 (5-114)||(33742256-33742363)
chr4 (201-234)||(15481958-15481991)
chr4 (31-87)||(28385531-28385587)
[»] scaffold0035 (2 HSPs)
scaffold0035 (123-220)||(106052-106149)
scaffold0035 (196-234)||(106005-106043)
[»] scaffold1815 (1 HSPs)
scaffold1815 (123-215)||(791-883)
[»] chr3 (81 HSPs)
chr3 (123-215)||(14642747-14642839)
chr3 (123-215)||(6158160-6158252)
chr3 (123-215)||(37037618-37037710)
chr3 (126-198)||(6469618-6469690)
chr3 (123-215)||(14153624-14153716)
chr3 (123-215)||(17043821-17043913)
chr3 (123-215)||(50349257-50349349)
chr3 (126-198)||(15076424-15076496)
chr3 (126-198)||(15977106-15977178)
chr3 (126-194)||(18440416-18440484)
chr3 (126-194)||(19485490-19485558)
chr3 (126-198)||(28849098-28849170)
chr3 (126-198)||(45578310-45578382)
chr3 (5-114)||(324206-324315)
chr3 (123-207)||(9644227-9644311)
chr3 (126-198)||(12269064-12269136)
chr3 (110-204)||(19569505-19569599)
chr3 (126-196)||(49390237-49390307)
chr3 (5-114)||(14966140-14966249)
chr3 (5-114)||(52989762-52989871)
chr3 (123-207)||(12506874-12506958)
chr3 (123-207)||(12513017-12513101)
chr3 (123-207)||(53647073-53647157)
chr3 (126-195)||(21618072-21618142)
chr3 (5-114)||(43889666-43889775)
chr3 (123-207)||(41173554-41173638)
chr3 (4-114)||(16643143-16643253)
chr3 (5-87)||(17691748-17691830)
chr3 (126-195)||(36166178-36166248)
chr3 (123-193)||(45531818-45531888)
chr3 (5-114)||(4107518-4107627)
chr3 (5-114)||(12339677-12339786)
chr3 (5-114)||(12469872-12469981)
chr3 (5-114)||(18700347-18700456)
chr3 (123-207)||(16180183-16180266)
chr3 (123-207)||(22307837-22307921)
chr3 (123-207)||(42327516-42327600)
chr3 (7-114)||(16796457-16796564)
chr3 (5-87)||(11300551-11300633)
chr3 (5-87)||(14670921-14671003)
chr3 (5-114)||(4111370-4111479)
chr3 (5-114)||(5223275-5223384)
chr3 (5-114)||(7109577-7109686)
chr3 (5-114)||(7113512-7113621)
chr3 (5-114)||(11165650-11165759)
chr3 (123-215)||(15017425-15017511)
chr3 (5-86)||(15465074-15465155)
chr3 (5-114)||(22321543-22321652)
chr3 (5-114)||(22336598-22336707)
chr3 (5-114)||(27409765-27409874)
chr3 (5-114)||(28949603-28949712)
chr3 (31-112)||(35961596-35961677)
chr3 (5-114)||(55022746-55022855)
chr3 (5-112)||(21837398-21837505)
chr3 (5-87)||(11854639-11854721)
chr3 (5-87)||(14682420-14682502)
chr3 (5-87)||(37439757-37439839)
chr3 (5-114)||(4588894-4589003)
chr3 (5-114)||(11069947-11070056)
chr3 (5-114)||(11914056-11914165)
chr3 (123-207)||(11191696-11191779)
chr3 (123-187)||(14507657-14507721)
chr3 (123-207)||(16728059-16728143)
chr3 (123-207)||(35065858-35065942)
chr3 (124-195)||(23431336-23431407)
chr3 (5-87)||(54876427-54876512)
chr3 (5-87)||(15964875-15964957)
chr3 (5-87)||(15968799-15968881)
chr3 (5-87)||(15972723-15972805)
chr3 (146-207)||(19574684-19574745)
chr3 (5-114)||(30065825-30065934)
chr3 (5-87)||(14499231-14499313)
chr3 (5-87)||(19775671-19775753)
chr3 (5-114)||(15617253-15617362)
chr3 (123-179)||(6145823-6145879)
chr3 (31-110)||(22652096-22652174)
chr3 (170-207)||(14251062-14251099)
chr3 (31-87)||(41815-41871)
chr3 (123-179)||(16044136-16044192)
chr3 (123-179)||(16049612-16049668)
chr3 (123-179)||(16058995-16059051)
[»] scaffold0371 (2 HSPs)
scaffold0371 (126-215)||(11531-11620)
scaffold0371 (123-179)||(14358-14414)
[»] scaffold0019 (1 HSPs)
scaffold0019 (123-215)||(26017-26109)
[»] chr5 (33 HSPs)
chr5 (123-215)||(12122683-12122775)
chr5 (123-215)||(31455266-31455358)
chr5 (123-215)||(36510005-36510097)
chr5 (126-198)||(39244744-39244816)
chr5 (123-215)||(21555565-21555657)
chr5 (123-215)||(31454653-31454745)
chr5 (123-198)||(21406871-21406946)
chr5 (5-114)||(6765800-6765909)
chr5 (5-114)||(22107474-22107583)
chr5 (126-194)||(5889728-5889796)
chr5 (126-194)||(21742110-21742178)
chr5 (123-207)||(23202940-23203024)
chr5 (123-207)||(26761195-26761279)
chr5 (123-198)||(16227117-16227192)
chr5 (123-207)||(20565186-20565270)
chr5 (123-198)||(17874807-17874882)
chr5 (126-215)||(21558233-21558322)
chr5 (5-114)||(33895685-33895794)
chr5 (31-114)||(17010986-17011069)
chr5 (5-114)||(18356168-18356277)
chr5 (5-114)||(20295723-20295832)
chr5 (5-114)||(20910956-20911065)
chr5 (31-114)||(263118-263201)
chr5 (5-87)||(40723708-40723790)
chr5 (5-114)||(15236956-15237065)
chr5 (5-114)||(19472841-19472950)
chr5 (22-114)||(29447975-29448067)
chr5 (5-87)||(10753267-10753349)
chr5 (123-198)||(12354146-12354220)
chr5 (19-83)||(20910851-20910914)
chr5 (126-198)||(29915584-29915655)
chr5 (22-87)||(18356315-18356379)
chr5 (31-87)||(33473272-33473328)
[»] chr2 (46 HSPs)
chr2 (123-215)||(356763-356855)
chr2 (126-198)||(28576734-28576806)
chr2 (126-198)||(45030328-45030400)
chr2 (123-214)||(9974651-9974742)
chr2 (123-207)||(25085183-25085267)
chr2 (5-112)||(27472393-27472500)
chr2 (123-207)||(10897863-10897947)
chr2 (5-114)||(21081776-21081885)
chr2 (5-114)||(22459602-22459711)
chr2 (5-114)||(23069323-23069432)
chr2 (5-114)||(23707328-23707437)
chr2 (5-114)||(24918082-24918191)
chr2 (123-207)||(18389495-18389579)
chr2 (123-215)||(22500609-22500700)
chr2 (123-215)||(22508543-22508634)
chr2 (123-215)||(24883187-24883279)
chr2 (5-112)||(18358773-18358880)
chr2 (5-114)||(34874252-34874361)
chr2 (5-87)||(9784680-9784762)
chr2 (5-87)||(24681413-24681495)
chr2 (5-87)||(31345115-31345197)
chr2 (126-215)||(22688448-22688537)
chr2 (5-114)||(24628600-24628709)
chr2 (5-114)||(24670967-24671076)
chr2 (5-114)||(27379554-27379663)
chr2 (5-114)||(27383600-27383709)
chr2 (5-114)||(27601672-27601781)
chr2 (123-207)||(19357717-19357801)
chr2 (127-207)||(25140677-25140756)
chr2 (5-87)||(1283292-1283374)
chr2 (5-87)||(30345112-30345194)
chr2 (5-114)||(12901633-12901742)
chr2 (123-207)||(5032599-5032683)
chr2 (123-179)||(10744157-10744213)
chr2 (141-213)||(23285441-23285513)
chr2 (123-207)||(24782140-24782221)
chr2 (5-87)||(41531125-41531207)
chr2 (5-114)||(10101766-10101875)
chr2 (31-114)||(21914883-21914966)
chr2 (5-70)||(24649277-24649342)
chr2 (122-179)||(27860092-27860149)
chr2 (123-162)||(18391502-18391541)
chr2 (31-114)||(34492200-34492283)
chr2 (125-205)||(21367558-21367638)
chr2 (109-153)||(22689468-22689512)
chr2 (175-215)||(24883112-24883152)
[»] scaffold0134 (1 HSPs)
scaffold0134 (123-213)||(10419-10509)
[»] scaffold0009 (1 HSPs)
scaffold0009 (8-114)||(85517-85623)
[»] chr6 (51 HSPs)
chr6 (123-213)||(20734631-20734721)
chr6 (4-114)||(14979426-14979536)
chr6 (126-198)||(19859413-19859485)
chr6 (126-198)||(25957190-25957262)
chr6 (126-198)||(25965237-25965309)
chr6 (123-207)||(20411978-20412062)
chr6 (5-114)||(17377837-17377946)
chr6 (5-114)||(28103938-28104047)
chr6 (5-114)||(17743349-17743458)
chr6 (5-114)||(19773582-19773691)
chr6 (5-114)||(23414856-23414965)
chr6 (126-207)||(23492465-23492546)
chr6 (126-207)||(23498063-23498144)
chr6 (5-114)||(27556614-27556723)
chr6 (6-114)||(22805904-22806012)
chr6 (123-207)||(27329100-27329184)
chr6 (123-207)||(27389840-27389924)
chr6 (22-114)||(27415996-27416088)
chr6 (31-114)||(18913917-18914000)
chr6 (31-114)||(18937175-18937258)
chr6 (5-87)||(16760198-16760280)
chr6 (5-87)||(18955884-18955966)
chr6 (5-87)||(31477931-31478013)
chr6 (5-114)||(11566738-11566847)
chr6 (5-114)||(15705483-15705592)
chr6 (22-87)||(18696486-18696551)
chr6 (5-114)||(18917387-18917496)
chr6 (5-114)||(19870466-19870575)
chr6 (5-114)||(23394944-23395053)
chr6 (123-215)||(19830147-19830239)
chr6 (191-234)||(31630798-31630841)
chr6 (8-114)||(15875355-15875461)
chr6 (125-207)||(23017392-23017474)
chr6 (5-114)||(8243737-8243846)
chr6 (5-70)||(14472191-14472256)
chr6 (5-114)||(15817561-15817670)
chr6 (22-87)||(18706304-18706369)
chr6 (5-114)||(22862822-22862931)
chr6 (5-114)||(23989796-23989905)
chr6 (189-234)||(31630854-31630899)
chr6 (31-114)||(15174163-15174246)
chr6 (124-195)||(27850660-27850731)
chr6 (5-87)||(1644611-1644693)
chr6 (5-87)||(22949011-22949093)
chr6 (5-87)||(22952967-22953049)
chr6 (5-87)||(23871455-23871537)
chr6 (5-87)||(23875411-23875493)
chr6 (123-176)||(28947275-28947328)
chr6 (189-229)||(15874854-15874894)
chr6 (123-179)||(18458314-18458370)
chr6 (31-87)||(23956150-23956206)
[»] scaffold0008 (1 HSPs)
scaffold0008 (126-198)||(71549-71621)
[»] scaffold0170 (1 HSPs)
scaffold0170 (123-213)||(2289-2379)
[»] scaffold0077 (1 HSPs)
scaffold0077 (125-215)||(13838-13928)
[»] scaffold0039 (1 HSPs)
scaffold0039 (123-212)||(11067-11156)
[»] scaffold0810 (1 HSPs)
scaffold0810 (126-198)||(2554-2626)
[»] scaffold0507 (1 HSPs)
scaffold0507 (123-215)||(3159-3251)
[»] scaffold0220 (2 HSPs)
scaffold0220 (123-215)||(15485-15577)
scaffold0220 (123-212)||(3223-3312)
[»] scaffold0022 (2 HSPs)
scaffold0022 (126-194)||(116044-116112)
scaffold0022 (5-114)||(53878-53987)
[»] scaffold0108 (1 HSPs)
scaffold0108 (110-215)||(5136-5241)
[»] scaffold0218 (1 HSPs)
scaffold0218 (123-215)||(9278-9370)
[»] scaffold0098 (1 HSPs)
scaffold0098 (123-215)||(38878-38970)
[»] scaffold0780 (1 HSPs)
scaffold0780 (3-114)||(3365-3476)
[»] scaffold0877 (1 HSPs)
scaffold0877 (5-114)||(2753-2862)
[»] scaffold0434 (1 HSPs)
scaffold0434 (5-114)||(6981-7090)
[»] scaffold0100 (1 HSPs)
scaffold0100 (8-81)||(36073-36146)
[»] scaffold0020 (2 HSPs)
scaffold0020 (5-114)||(169789-169898)
scaffold0020 (123-198)||(142254-142329)
[»] scaffold0011 (1 HSPs)
scaffold0011 (5-114)||(125927-126036)
[»] scaffold0462 (3 HSPs)
scaffold0462 (123-207)||(5685-5769)
scaffold0462 (123-207)||(179-263)
scaffold0462 (31-114)||(10482-10564)
[»] scaffold0051 (3 HSPs)
scaffold0051 (123-207)||(65286-65370)
scaffold0051 (5-114)||(31095-31204)
scaffold0051 (170-207)||(79549-79586)
[»] scaffold0290 (1 HSPs)
scaffold0290 (7-114)||(131-238)
[»] scaffold0034 (2 HSPs)
scaffold0034 (5-112)||(119982-120089)
scaffold0034 (123-175)||(56472-56524)
[»] scaffold1783 (1 HSPs)
scaffold1783 (5-114)||(389-498)
[»] scaffold0737 (1 HSPs)
scaffold0737 (110-207)||(6910-7007)
[»] scaffold0513 (1 HSPs)
scaffold0513 (8-81)||(10894-10967)
[»] scaffold0484 (1 HSPs)
scaffold0484 (5-114)||(824-933)
[»] scaffold0096 (1 HSPs)
scaffold0096 (5-114)||(21138-21247)
[»] scaffold0042 (2 HSPs)
scaffold0042 (110-207)||(47711-47808)
scaffold0042 (123-153)||(28101-28131)
[»] scaffold0529 (1 HSPs)
scaffold0529 (123-207)||(7079-7163)
[»] scaffold0036 (1 HSPs)
scaffold0036 (123-207)||(78587-78671)
[»] scaffold0001 (3 HSPs)
scaffold0001 (123-207)||(31600-31684)
scaffold0001 (123-207)||(36907-36991)
scaffold0001 (31-87)||(176080-176136)
[»] scaffold0195 (1 HSPs)
scaffold0195 (123-198)||(16964-17039)
[»] scaffold0017 (2 HSPs)
scaffold0017 (27-114)||(1227-1314)
scaffold0017 (27-114)||(7978-8065)
[»] scaffold0241 (1 HSPs)
scaffold0241 (122-207)||(1138-1223)
[»] scaffold0117 (1 HSPs)
scaffold0117 (5-114)||(39224-39333)
[»] scaffold0107 (4 HSPs)
scaffold0107 (5-114)||(10124-10233)
scaffold0107 (123-206)||(10804-10887)
scaffold0107 (123-206)||(16607-16690)
scaffold0107 (22-87)||(15471-15536)
[»] scaffold0450 (1 HSPs)
scaffold0450 (123-207)||(13416-13500)
[»] scaffold0328 (1 HSPs)
scaffold0328 (123-207)||(19844-19928)
[»] scaffold0123 (1 HSPs)
scaffold0123 (18-114)||(509-605)
[»] scaffold0054 (1 HSPs)
scaffold0054 (123-207)||(66264-66347)
[»] scaffold0003 (1 HSPs)
scaffold0003 (22-114)||(71273-71365)
[»] scaffold0747 (1 HSPs)
scaffold0747 (5-112)||(533-640)
[»] scaffold0076 (1 HSPs)
scaffold0076 (7-114)||(24639-24745)
[»] scaffold0575 (1 HSPs)
scaffold0575 (5-87)||(6199-6281)
[»] scaffold0200 (1 HSPs)
scaffold0200 (5-87)||(17572-17654)
[»] scaffold0676 (1 HSPs)
scaffold0676 (5-114)||(326-435)
[»] scaffold0317 (1 HSPs)
scaffold0317 (5-110)||(6942-7047)
[»] scaffold0278 (2 HSPs)
scaffold0278 (189-234)||(7076-7121)
scaffold0278 (5-80)||(7840-7915)
[»] scaffold0125 (1 HSPs)
scaffold0125 (5-114)||(1914-2023)
[»] scaffold0029 (3 HSPs)
scaffold0029 (5-114)||(65649-65758)
scaffold0029 (5-87)||(80618-80700)
scaffold0029 (5-114)||(61733-61842)
[»] scaffold0028 (2 HSPs)
scaffold0028 (5-114)||(58840-58949)
scaffold0028 (123-176)||(4228-4281)
[»] scaffold0509 (1 HSPs)
scaffold0509 (123-207)||(10035-10119)
[»] scaffold0156 (1 HSPs)
scaffold0156 (5-114)||(15713-15823)
[»] scaffold0149 (1 HSPs)
scaffold0149 (123-207)||(20421-20505)
[»] scaffold0037 (1 HSPs)
scaffold0037 (5-113)||(80456-80564)
[»] scaffold1186 (1 HSPs)
scaffold1186 (123-198)||(399-473)
[»] scaffold0074 (1 HSPs)
scaffold0074 (123-190)||(308-375)
[»] scaffold0057 (1 HSPs)
scaffold0057 (31-114)||(70536-70619)
[»] scaffold0016 (1 HSPs)
scaffold0016 (7-114)||(207625-207732)
[»] scaffold0005 (1 HSPs)
scaffold0005 (123-198)||(187795-187869)
[»] scaffold0109 (1 HSPs)
scaffold0109 (5-87)||(36063-36145)
[»] scaffold0031 (1 HSPs)
scaffold0031 (5-87)||(36207-36289)
[»] scaffold0012 (1 HSPs)
scaffold0012 (5-87)||(189498-189580)
[»] scaffold0630 (1 HSPs)
scaffold0630 (123-215)||(7858-7950)
[»] scaffold0599 (1 HSPs)
scaffold0599 (5-114)||(1332-1441)
[»] scaffold0525 (1 HSPs)
scaffold0525 (5-70)||(3996-4061)
[»] scaffold0375 (1 HSPs)
scaffold0375 (123-207)||(9579-9661)
[»] scaffold0372 (1 HSPs)
scaffold0372 (5-114)||(5222-5331)
[»] scaffold0349 (1 HSPs)
scaffold0349 (5-114)||(12298-12407)
[»] scaffold0293 (1 HSPs)
scaffold0293 (5-114)||(20250-20359)
[»] scaffold0090 (1 HSPs)
scaffold0090 (123-176)||(17083-17136)
[»] scaffold0141 (1 HSPs)
scaffold0141 (7-87)||(14210-14290)
[»] scaffold0113 (1 HSPs)
scaffold0113 (123-207)||(33926-34009)
[»] scaffold0415 (1 HSPs)
scaffold0415 (5-87)||(298-380)
[»] scaffold0229 (1 HSPs)
scaffold0229 (5-87)||(11622-11704)
[»] scaffold0157 (1 HSPs)
scaffold0157 (5-87)||(32781-32863)
[»] scaffold0018 (1 HSPs)
scaffold0018 (5-67)||(20769-20831)
[»] scaffold0061 (1 HSPs)
scaffold0061 (5-114)||(67423-67531)
[»] scaffold0401 (1 HSPs)
scaffold0401 (123-179)||(7685-7741)
[»] scaffold0058 (1 HSPs)
scaffold0058 (31-111)||(5722-5802)
[»] scaffold0048 (1 HSPs)
scaffold0048 (123-179)||(55801-55857)
[»] scaffold1223 (1 HSPs)
scaffold1223 (123-198)||(371-445)
[»] scaffold0515 (1 HSPs)
scaffold0515 (31-114)||(4291-4374)
[»] scaffold0306 (1 HSPs)
scaffold0306 (31-114)||(4291-4374)
[»] scaffold0138 (1 HSPs)
scaffold0138 (31-114)||(33178-33261)
[»] scaffold0046 (1 HSPs)
scaffold0046 (31-114)||(22477-22560)
[»] scaffold0032 (1 HSPs)
scaffold0032 (23-114)||(67233-67324)
[»] scaffold0023 (1 HSPs)
scaffold0023 (5-87)||(105079-105161)
[»] scaffold0056 (1 HSPs)
scaffold0056 (197-234)||(79840-79877)
[»] scaffold0741 (1 HSPs)
scaffold0741 (7-79)||(4311-4383)
[»] scaffold0178 (1 HSPs)
scaffold0178 (123-179)||(368-424)
[»] scaffold0063 (1 HSPs)
scaffold0063 (123-198)||(72867-72941)
[»] scaffold0004 (2 HSPs)
scaffold0004 (123-162)||(109024-109063)
scaffold0004 (201-234)||(362203-362236)
[»] scaffold0445 (1 HSPs)
scaffold0445 (123-179)||(3165-3221)
[»] scaffold0010 (1 HSPs)
scaffold0010 (110-162)||(127606-127658)


Alignment Details
Target: chr8 (Bit Score: 108; Significance: 2e-54; HSPs: 54)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 123 - 234
Target Start/End: Original strand, 13428579 - 13428690
Alignment:
Q  123 ttaagttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttgtttaagttattatgagatgataaatatg 222  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  13428579 ttaagttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcgttgttgtttaagttattatgagatgataaatatg 13428678  T
Q  223 tgttgttatatt 234  Q
    ||||||||||||    
T  13428679 tgttgttatatt 13428690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 123 - 234
Target Start/End: Original strand, 1323614 - 1323725
Alignment:
Q  123 ttaagttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttgtttaagttattatgagatgataaatatg 222  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  1323614 ttaagttgtcatttgtcaatgagttgttaataaagaactaagtgaagtattaatatttattaatcgttgttgtttaagttattatgagatgataaatatg 1323713  T
Q  223 tgttgttatatt 234  Q
    ||||||||||||    
T  1323714 tgttgttatatt 1323725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 123 - 234
Target Start/End: Original strand, 38550522 - 38550633
Alignment:
Q  123 ttaagttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttgtttaagttattatgagatgataaatatg 222  Q
    |||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  38550522 ttaagttgtcatttatcaatgagttgttaataaagaactaagtgaagtattaatatttattaatcgttgttgtttaagttattatgagatgataaatatg 38550621  T
Q  223 tgttgttatatt 234  Q
    ||||||||||||    
T  38550622 tgttgttatatt 38550633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 123 - 234
Target Start/End: Original strand, 27472819 - 27472928
Alignment:
Q  123 ttaagttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttgtttaagttattatgagatgataaatatg 222  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||  | |||||    
T  27472819 ttaagttgtcatttgtcaatgagttgttaataaagaactaagtgaagtattaatatttattaatcgttgttgtttaagttattatgagatg--acatatg 27472916  T
Q  223 tgttgttatatt 234  Q
    ||||||||||||    
T  27472917 tgttgttatatt 27472928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 123 - 215
Target Start/End: Original strand, 41681860 - 41681952
Alignment:
Q  123 ttaagttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttgtttaagttattatgagatgat 215  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||| ||||||||||||||||    
T  41681860 ttaagttgtcaattgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcgtggttgtttatgttattatgagatgat 41681952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 126 - 198
Target Start/End: Complemental strand, 26219419 - 26219347
Alignment:
Q  126 agttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttgttta 198  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  26219419 agttgtcatttgtcaatgagttgttaataaagaactaagtgaagtattaatatttattaatcattgttgttta 26219347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 126 - 198
Target Start/End: Original strand, 20046639 - 20046711
Alignment:
Q  126 agttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttgttta 198  Q
    |||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||    
T  20046639 agttgtcatttgtcaatgagttgtcaataaagaactaagtgaagtattaatatttattaatcattgttgttta 20046711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 126 - 198
Target Start/End: Original strand, 20983194 - 20983266
Alignment:
Q  126 agttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttgttta 198  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||    
T  20983194 agttgtcatttgtcaatgagttgttaataaagaactaagtgaaataataatatttattaatcgttgttgttta 20983266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 4 - 114
Target Start/End: Complemental strand, 23659489 - 23659379
Alignment:
Q  4 aagatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaatttattcatgtttttc 103  Q
    |||||||||| ||| || |||||||||||||||||||||||| |||| || |||||||||||||||| ||| |||||||||||| || ||  ||||||||    
T  23659489 aagatgtttatgtgatgcctatgttgctgttgttggttatgtgaaatatttatatgccttatgtggaaaatgtatgatgtttaagttgttggtgtttttc 23659390  T
Q  104 attaatattgt 114  Q
    |||||||||||    
T  23659389 attaatattgt 23659379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 110 - 207
Target Start/End: Original strand, 22259548 - 22259645
Alignment:
Q  110 attgtcattatatttaagttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttgtttaagttattat 207  Q
    ||||||||| |  |||||||||||||| |||||||||||||||| |||||||| ||||| ||||||||||||||||||||||||||||| ||| ||||    
T  22259548 attgtcattgtcgttaagttgtcatttatcaatgagttgttaatgaagaactatgtgaagtattaatatttattaatcattgttgtttatgttgttat 22259645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 123 - 216
Target Start/End: Complemental strand, 23669272 - 23669179
Alignment:
Q  123 ttaagttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttgtttaagttattatgagatgata 216  Q
    |||||||||||||||||||||||||||||||| ||||||  |||||||||||||||||||||||| |||||||||| ||  |||| ||||||||    
T  23669272 ttaagttgtcatttgtcaatgagttgttaatagagaacttggtgaaatattaatatttattaatcgttgttgtttatgtcgttataagatgata 23669179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 126 - 215
Target Start/End: Original strand, 29764012 - 29764101
Alignment:
Q  126 agttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttgtttaagttattatgagatgat 215  Q
    |||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||| |||||||||| ||  |||||| |||||    
T  29764012 agttgtcatttgtcaatgagttgttaataatgaactaagtgaagtattaatatttattaatcgttgttgtttatgtcgttatgatatgat 29764101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 126 - 198
Target Start/End: Original strand, 26225751 - 26225823
Alignment:
Q  126 agttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttgttta 198  Q
    ||||||||||||||||| ||||||||||||||||||||||||| ||||||||| |||||||||||||||||||    
T  26225751 agttgtcatttgtcaattagttgttaataaagaactaagtgaagtattaatatatattaatcattgttgttta 26225823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 126 - 198
Target Start/End: Complemental strand, 39833538 - 39833466
Alignment:
Q  126 agttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttgttta 198  Q
    |||||||||||||||||||||| |||||||||||||||||||| | |||||||||||||||||||||||||||    
T  39833538 agttgtcatttgtcaatgagttattaataaagaactaagtgaagtgttaatatttattaatcattgttgttta 39833466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 123 - 215
Target Start/End: Original strand, 21580415 - 21580509
Alignment:
Q  123 ttaagttgtcatttgtcaatgagttgttaataaag-aactaagtgaaatattaata-tttattaatcattgttgtttaagttattatgagatgat 215  Q
    ||||||||||| ||||||||||||||||||||||| ||||||||||| |||||||| |||||||||| | |||||||| ||||||||||||||||    
T  21580415 ttaagttgtcaattgtcaatgagttgttaataaagaaactaagtgaagtattaatattttattaatcgtggttgtttatgttattatgagatgat 21580509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 5 - 113
Target Start/End: Complemental strand, 18833643 - 18833535
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaatttattcatgtttttca 104  Q
    ||||||||| ||| || |||||||||||||||||||||||| |||| || |||||||||||||||| ||| |||||||||||| || || ||| || |||    
T  18833643 agatgtttatgtgctgcctatgttgctgttgttggttatgtgaaatatttatatgccttatgtggaaaatgtatgatgtttaagttttttatgcttctca 18833544  T
Q  105 ttaatattg 113  Q
    |||||||||    
T  18833543 ttaatattg 18833535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 123 - 207
Target Start/End: Complemental strand, 19127808 - 19127724
Alignment:
Q  123 ttaagttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttgtttaagttattat 207  Q
    ||||||||| |||| |||||||||||||||| |||||||| |||||||||||||||||||||||| |||||||||| ||| ||||    
T  19127808 ttaagttgtaatttatcaatgagttgttaatgaagaactatgtgaaatattaatatttattaatcgttgttgtttatgttgttat 19127724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 123 - 207
Target Start/End: Original strand, 42266791 - 42266875
Alignment:
Q  123 ttaagttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttgtttaagttattat 207  Q
    |||||||||||||| |||||||||||||||| |||||||| ||||| |||||||||||||||||| |||||||||| ||| ||||    
T  42266791 ttaagttgtcatttatcaatgagttgttaatgaagaactatgtgaagtattaatatttattaatcgttgttgtttatgttgttat 42266875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 8 - 81
Target Start/End: Original strand, 1327050 - 1327123
Alignment:
Q  8 tgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgat 81  Q
    |||||||||| || ||| ||||||||||| |||||||| |||||||||||||||||||||||||||||||||||    
T  1327050 tgtttaagtgctgcctaagttgctgttgtaggttatgtgaaatgttcatatgccttatgtggagaatatatgat 1327123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 123 - 207
Target Start/End: Original strand, 20179729 - 20179813
Alignment:
Q  123 ttaagttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttgtttaagttattat 207  Q
    ||||||||| |||| |||||||||||||||| |||||||| ||||| |||||||||||||||||| |||||||||| ||| ||||    
T  20179729 ttaagttgtaatttatcaatgagttgttaatgaagaactatgtgaagtattaatatttattaatcgttgttgtttatgttgttat 20179813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 123 - 215
Target Start/End: Complemental strand, 22207033 - 22206941
Alignment:
Q  123 ttaagttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttgtttaagttattatgagatgat 215  Q
    |||||||||||||| |||||||||||||||| |||||||| ||||| |||||||||||||||||  |||||||||| ||  |||| |||||||    
T  22207033 ttaagttgtcatttatcaatgagttgttaatgaagaactatgtgaagtattaatatttattaattgttgttgtttatgtcgttataagatgat 22206941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 123 - 207
Target Start/End: Original strand, 39695812 - 39695896
Alignment:
Q  123 ttaagttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttgtttaagttattat 207  Q
    |||||||||||||| |||||||||||||||| || ||||| ||||| |||||||||||||||||| |||||||||| ||| ||||    
T  39695812 ttaagttgtcatttatcaatgagttgttaatgaaaaactatgtgaagtattaatatttattaatcgttgttgtttatgttgttat 39695896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 5 - 112
Target Start/End: Original strand, 19808402 - 19808509
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaatttattcatgtttttca 104  Q
    ||||||||| ||| ||||||||||||| ||||||||||||| |||| || |||||||| ||||||| ||| |||||||||||| || || ||| | ||||    
T  19808402 agatgtttacgtgctgtctatgttgctattgttggttatgtgaaatatttatatgcctcatgtggaaaatgtatgatgtttaagttgttgatgctcttca 19808501  T
Q  105 ttaatatt 112  Q
    ||||||||    
T  19808502 ttaatatt 19808509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 123 - 193
Target Start/End: Original strand, 5083526 - 5083596
Alignment:
Q  123 ttaagttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgtt 193  Q
    ||||||||||||||||||||||||| ||||| |||||||| ||||| |||||||||||||||||| |||||    
T  5083526 ttaagttgtcatttgtcaatgagttattaatgaagaactatgtgaagtattaatatttattaatcgttgtt 5083596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 114
Target Start/End: Original strand, 17461092 - 17461201
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaatttattcatgtttttca 104  Q
    ||||||||| |||||  |||||||| ||||||||||||||| |||| || |||||||||||||||| ||| || ||||||||| || ||  || ||||||    
T  17461092 agatgtttatgtgtttcctatgttgttgttgttggttatgtgaaatatttatatgccttatgtggaaaatgtaagatgtttaagttgttggtgcttttca 17461191  T
Q  105 ttaatattgt 114  Q
    ||||||||||    
T  17461192 ttaatattgt 17461201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 5 - 113
Target Start/End: Original strand, 16402042 - 16402150
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaatttattcatgtttttca 104  Q
    ||||||||| ||| || |||||||||||||||||||||||| |||| || |||||| ||||||||| ||| |||||||||||| || || ||  | ||||    
T  16402042 agatgtttacgtgctgcctatgttgctgttgttggttatgtgaaatatttatatgcgttatgtggaaaatgtatgatgtttaagttgttgatactcttca 16402141  T
Q  105 ttaatattg 113  Q
    |||||||||    
T  16402142 ttaatattg 16402150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 5 - 87
Target Start/End: Complemental strand, 23914118 - 23914036
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaa 87  Q
    ||||||||| ||| || |||||||||||||||||||||||| |||| || |||||||||||||||| ||| || |||||||||    
T  23914118 agatgtttatgtgatgcctatgttgctgttgttggttatgtgaaatatttatatgccttatgtggaaaatgtacgatgtttaa 23914036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 7 - 113
Target Start/End: Complemental strand, 37515784 - 37515678
Alignment:
Q  7 atgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaatttattcatgtttttcatt 106  Q
    ||||||| ||| || |||||||||||||||||||||||| |||| || || ||||||||||||| ||  || ||||||||| || || ||| ||||||||    
T  37515784 atgtttatgtgctgcctatgttgctgttgttggttatgtgaaatatttatgtgccttatgtggaaaaagtacgatgtttaagttgttgatgcttttcatt 37515685  T
Q  107 aatattg 113  Q
    |||||||    
T  37515684 aatattg 37515678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 5 - 114
Target Start/End: Original strand, 19278404 - 19278513
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaatttattcatgtttttca 104  Q
    ||||||||| |||| | |||||||||||||||||||||||| |||| || ||||||||||||||||  || | |||||||||| || || ||| ||  ||    
T  19278404 agatgtttatgtgtcgcctatgttgctgttgttggttatgtgaaatatttatatgccttatgtggaagatgtttgatgtttaagttgttgatgcttcaca 19278503  T
Q  105 ttaatattgt 114  Q
    ||||||||||    
T  19278504 ttaatattgt 19278513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 189 - 234
Target Start/End: Original strand, 19801881 - 19801926
Alignment:
Q  189 ttgttgtttaagttattatgagatgataaatatgtgttgttatatt 234  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  19801881 ttgttgtttaagttattatgagatgataaatatgtgttgttatatt 19801926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 5 - 114
Target Start/End: Original strand, 21976791 - 21976900
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaatttattcatgtttttca 104  Q
    ||||||||| |||| | |||||||||||||||||||||||| |||| || ||||||||||||||||  || | |||||||||| || || ||| ||  ||    
T  21976791 agatgtttatgtgtcgcctatgttgctgttgttggttatgtgaaatatttatatgccttatgtggaagatgtttgatgtttaagttgttgatgcttcaca 21976890  T
Q  105 ttaatattgt 114  Q
    ||||||||||    
T  21976891 ttaatattgt 21976900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 5 - 114
Target Start/End: Complemental strand, 23409876 - 23409767
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaatttattcatgtttttca 104  Q
    ||||||||| ||| || |||||||| ||||||||||||||| |||| || |||| ||||||||||| |||  ||||| ||||| || || ||||| ||||    
T  23409876 agatgtttacgtgctgcctatgttgttgttgttggttatgtgaaatatttatataccttatgtggaaaatgaatgatatttaagttgttgatgttcttca 23409777  T
Q  105 ttaatattgt 114  Q
    ||||||||||    
T  23409776 ttaatattgt 23409767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 5 - 89
Target Start/End: Original strand, 21972706 - 21972790
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaatt 89  Q
    ||||||||| |||| | |||||||||||||||||||||||| |||| || ||||||||||||||||  || | ||||||||||||    
T  21972706 agatgtttatgtgtcgcctatgttgctgttgttggttatgtgaaatatttatatgccttatgtggaagatgtttgatgtttaatt 21972790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 87
Target Start/End: Original strand, 21828135 - 21828217
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaa 87  Q
    ||||||||| |||| | |||||||||||||||||||||||| |||| || ||||| ||||||||||  || ||||||||||||    
T  21828135 agatgtttacgtgtcgcctatgttgctgttgttggttatgtgaaatatttatatgacttatgtggaagatgtatgatgtttaa 21828217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 31 - 112
Target Start/End: Complemental strand, 19880172 - 19880091
Alignment:
Q  31 tgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaatttattcatgtttttcattaatatt 112  Q
    ||||||||||||||| ||||  | |||||||||||||||| ||| |||||||||||| || || ||| ||||||||||||||    
T  19880172 tgttgttggttatgtgaaataattatatgccttatgtggaaaatgtatgatgtttaagttgttgatgcttttcattaatatt 19880091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 5 - 114
Target Start/End: Original strand, 22238059 - 22238167
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaatttattcatgtttttca 104  Q
    ||||||||| |||||   ||||||| ||||||||||||||| |||| || |||||||||||||||| ||| |||||||||||| || || ||  | ||||    
T  22238059 agatgtttacgtgtttcttatgttgttgttgttggttatgtgaaatatttatatgccttatgtgga-aatgtatgatgtttaagttgttgatcctcttca 22238157  T
Q  105 ttaatattgt 114  Q
    ||||||||||    
T  22238158 ttaatattgt 22238167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 33 - 114
Target Start/End: Complemental strand, 23478422 - 23478341
Alignment:
Q  33 ttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaatttattcatgtttttcattaatattgt 114  Q
    ||||||||||||| ||||  | |||||||||||||||| ||| |||||||||||| || || ||| ||||||||||||||||    
T  23478422 ttgttggttatgtgaaataattatatgccttatgtggaaaatgtatgatgtttaagttgtttatgcttttcattaatattgt 23478341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 5 - 114
Target Start/End: Complemental strand, 43251798 - 43251689
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaatttattcatgtttttca 104  Q
    ||||||||| |||| | |||||||| ||||||||||||||| |||| || ||||||||||||||||  || | |||||||||| || || ||| ||  ||    
T  43251798 agatgtttatgtgtcgcctatgttgttgttgttggttatgtgaaatatttatatgccttatgtggaagatgtttgatgtttaagttgttgatgcttcaca 43251699  T
Q  105 ttaatattgt 114  Q
    ||||||||||    
T  43251698 ttaatattgt 43251689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 22 - 114
Target Start/End: Complemental strand, 22111899 - 22111807
Alignment:
Q  22 ctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaatttattcatgtttttcattaatattgt 114  Q
    |||||||||||||||||||||||| |||| || ||||||||||||||||  || | |||||||||| || || ||| ||  ||||||||||||    
T  22111899 ctatgttgctgttgttggttatgtgaaatatttatatgccttatgtggaagatgtttgatgtttaagttgttgatgcttcacattaatattgt 22111807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 87
Target Start/End: Original strand, 18862766 - 18862848
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaa 87  Q
    ||||||||| |||| | |||||||| ||||||||||||||| |||| || ||||| ||||||||||  || ||||||||||||    
T  18862766 agatgtttacgtgtcgcctatgttgttgttgttggttatgtgaaatatttatatgacttatgtggaagatgtatgatgtttaa 18862848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 87
Target Start/End: Complemental strand, 21410935 - 21410853
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaa 87  Q
    ||||||||| |||| | |||||||||||||||||||||||| |||| || ||||  ||||||||||  || ||||||||||||    
T  21410935 agatgtttacgtgtcgcctatgttgctgttgttggttatgtgaaatatttatataacttatgtggaagatgtatgatgtttaa 21410853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 87
Target Start/End: Complemental strand, 21805427 - 21805345
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaa 87  Q
    ||||||||| |||| | |||||||||||||||||||||||| |||| || ||||  ||||||||||  || ||||||||||||    
T  21805427 agatgtttacgtgtcgcctatgttgctgttgttggttatgtgaaatatttatataacttatgtggaagatgtatgatgtttaa 21805345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 123 - 207
Target Start/End: Original strand, 31723945 - 31724028
Alignment:
Q  123 ttaagttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttgtttaagttattat 207  Q
    ||||||| |||||| |||||||||||||||| |||||||| ||||| ||||||||  |||||||| || ||||||| ||| ||||    
T  31723945 ttaagttatcatttatcaatgagttgttaatgaagaactatgtgaagtattaata-ctattaatcgttattgtttatgttgttat 31724028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 31 - 114
Target Start/End: Complemental strand, 26454054 - 26453971
Alignment:
Q  31 tgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaatttattcatgtttttcattaatattgt 114  Q
    ||||||||||||||| ||||  | ||||| |||||||| | ||| |||||||||||| || || ||| ||||||||||||||||    
T  26454054 tgttgttggttatgtgaaataattatatgtcttatgtgaaaaatgtatgatgtttaagttgttgatgcttttcattaatattgt 26453971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 123 - 207
Target Start/End: Original strand, 18303050 - 18303134
Alignment:
Q  123 ttaagttgtcatttgtcaatgagttgttaataaagaacta-agtgaaatattaatatttattaatcattgttgtttaagttattat 207  Q
    |||||||||||||| |||||||| || ||| |||||||||  ||||| ||||||| ||||| |||| |||||||||| ||||||||    
T  18303050 ttaagttgtcatttatcaatgag-tgataaaaaagaactattgtgaagtattaatgtttatcaatcgttgttgtttatgttattat 18303134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 179
Target Start/End: Original strand, 36728525 - 36728581
Alignment:
Q  123 ttaagttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatt 179  Q
    |||||| ||||||| |||||||||||||||| |||||||| ||||  ||||||||||    
T  36728525 ttaagtcgtcatttatcaatgagttgttaatgaagaactatgtgaggtattaatatt 36728581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 60
Target Start/End: Original strand, 14397902 - 14397957
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgc 60  Q
    ||||||||| |||| | |||||||||||||||||||||||| |||| || ||||||    
T  14397902 agatgtttacgtgtcgcctatgttgctgttgttggttatgtgaaatatttatatgc 14397957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 123 - 198
Target Start/End: Original strand, 22319152 - 22319226
Alignment:
Q  123 ttaagttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttgttta 198  Q
    ||||||||||| || |||||||||||||||  |||||||| ||||| |||||||  ||||||||  ||||||||||    
T  22319152 ttaagttgtcaattatcaatgagttgttaacgaagaactatgtgaagtattaat-gttattaattgttgttgttta 22319226  T

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Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 196 - 234
Target Start/End: Original strand, 27472955 - 27472993
Alignment:
Q  196 ttaagttattatgagatgataaatatgtgttgttatatt 234  Q
    |||||||||||||||||||| ||||||||||||| ||||    
T  27472955 ttaagttattatgagatgatgaatatgtgttgttgtatt 27472993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 87
Target Start/End: Original strand, 8414418 - 8414474
Alignment:
Q  31 tgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaa 87  Q
    ||||||||||||||| ||||    |||||||||||||||| ||| ||||||||||||    
T  8414418 tgttgttggttatgtgaaataactatatgccttatgtggaaaatgtatgatgtttaa 8414474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 87
Target Start/End: Complemental strand, 11775066 - 11775010
Alignment:
Q  31 tgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaa 87  Q
    ||||||||||||||| ||||    |||||||||||||||| ||| ||||||||||||    
T  11775066 tgttgttggttatgtgaaataactatatgccttatgtggaaaatgtatgatgtttaa 11775010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 159
Target Start/End: Original strand, 20084750 - 20084786
Alignment:
Q  123 ttaagttgtcatttgtcaatgagttgttaataaagaa 159  Q
    |||||||||||||| |||||||||||||||| |||||    
T  20084750 ttaagttgtcatttatcaatgagttgttaatgaagaa 20084786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 179
Target Start/End: Complemental strand, 22244255 - 22244199
Alignment:
Q  123 ttaagttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatt 179  Q
    |||||||||||||| |||||||||||||||| ||| ||||  |||| ||||| ||||    
T  22244255 ttaagttgtcatttttcaatgagttgttaatgaagtactatatgaagtattattatt 22244199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 162
Target Start/End: Original strand, 25849680 - 25849732
Alignment:
Q  110 attgtcattatatttaagttgtcatttgtcaatgagttgttaataaagaacta 162  Q
    ||||||||||| ||||||||||||||| ||||||| || ||||| ||| ||||    
T  25849680 attgtcattatctttaagttgtcatttttcaatgaattattaatgaagtacta 25849732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 104; Significance: 6e-52; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 123 - 234
Target Start/End: Original strand, 44321 - 44432
Alignment:
Q  123 ttaagttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttgtttaagttattatgagatgataaatatg 222  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  44321 ttaagttgtcatttgtcaatgagttgttaataaagaactaagtgaagtattaatatttattaatcgttgttgtttaagttattatgagatgataaatatg 44420  T
Q  223 tgttgttatatt 234  Q
    ||||||||||||    
T  44421 tgttgttatatt 44432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 104; Significance: 6e-52; HSPs: 75)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 123 - 234
Target Start/End: Original strand, 14270571 - 14270682
Alignment:
Q  123 ttaagttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttgtttaagttattatgagatgataaatatg 222  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  14270571 ttaagttgtcatttgtcaatgagttgttaataaagaactaagtgaagtattaatatttattaatcgttgttgtttaagttattatgagatgataaatatg 14270670  T
Q  223 tgttgttatatt 234  Q
    ||||||||||||    
T  14270671 tgttgttatatt 14270682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 127 - 234
Target Start/End: Complemental strand, 8468084 - 8467977
Alignment:
Q  127 gttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttgtttaagttattatgagatgataaatatgtgtt 226  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||    
T  8468084 gttgtcatttgtcaatgagttgttaataaagaactaagtgaagtattaatatttattaatcgttgttgtttaagttattatgaaatgataaatatgtgtt 8467985  T
Q  227 gttatatt 234  Q
    ||||||||    
T  8467984 gttatatt 8467977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 123 - 234
Target Start/End: Original strand, 45848160 - 45848271
Alignment:
Q  123 ttaagttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttgtttaagttattatgagatgataaatatg 222  Q
    ||||||||||||||||||| |||||||| ||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  45848160 ttaagttgtcatttgtcaacgagttgttgataaagaactaagtgaagtattaatatttattaatcgttgttgtttaagttattatgagatgataaatatg 45848259  T
Q  223 tgttgttatatt 234  Q
    ||||||||||||    
T  45848260 tgttgttatatt 45848271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 123 - 231
Target Start/End: Complemental strand, 17232213 - 17232105
Alignment:
Q  123 ttaagttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttgtttaagttattatgagatgataaatatg 222  Q
    |||||||||||||||||| |||||||||||| |||||||||||||| |||||||||||||||||  ||||||||||||||||||||||||||||||||||    
T  17232213 ttaagttgtcatttgtcactgagttgttaattaagaactaagtgaagtattaatatttattaattgttgttgtttaagttattatgagatgataaatatg 17232114  T
Q  223 tgttgttat 231  Q
    |||||||||    
T  17232113 tgttgttat 17232105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 8 - 114
Target Start/End: Complemental strand, 8468795 - 8468689
Alignment:
Q  8 tgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaatttattcatgtttttcatta 107  Q
    ||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| || || ||| |||||||||    
T  8468795 tgtttaagtgttgcctatgttgctgttgttggttatgtgaaatgttcatatgccttatgtggagaatatatgatgtttaagttgttgatgcttttcatta 8468696  T
Q  108 atattgt 114  Q
    |||||||    
T  8468695 atattgt 8468689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 123 - 215
Target Start/End: Original strand, 30822051 - 30822143
Alignment:
Q  123 ttaagttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttgtttaagttattatgagatgat 215  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||| ||||||||||||||||    
T  30822051 ttaagttgtcatttgtcaatgagttgttaataaagaactaagtgaagtattaatatttattaatcgttgttgtttatgttattatgagatgat 30822143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 31 - 117
Target Start/End: Complemental strand, 17232973 - 17232887
Alignment:
Q  31 tgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaatttattcatgtttttcattaatattgtcat 117  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||||||    
T  17232973 tgttgttggttatgtgaaatgttcatatgccttatgtggagaatatatgatgtttaagttgttgatgtttttcattaatattgtcat 17232887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 5 - 114
Target Start/End: Complemental strand, 15113024 - 15112915
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaatttattcatgtttttca 104  Q
    |||||||||||||||| |||||||| ||||||||||||||| ||||||||||||||||||||| || ||| |||||||||||| || || ||| ||||||    
T  15113024 agatgtttaagtgttgcctatgttgatgttgttggttatgtgaaatgttcatatgccttatgtagaaaatgtatgatgtttaagttgttgatgcttttca 15112925  T
Q  105 ttaatattgt 114  Q
    ||||||||||    
T  15112924 ttaatattgt 15112915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 126 - 198
Target Start/End: Original strand, 10064266 - 10064338
Alignment:
Q  126 agttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttgttta 198  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  10064266 agttgtcatttgtcaatgagttgttaataaagaactaagtgaagtattaatatttattaatcattgttgttta 10064338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 123 - 215
Target Start/End: Original strand, 14162120 - 14162212
Alignment:
Q  123 ttaagttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttgtttaagttattatgagatgat 215  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||  |  ||||||||||||    
T  14162120 ttaagttgtcatttgtcaatgagttgttaataaataactaagtgaaatattaatatttattaatcgttgttgtttatatcgttatgagatgat 14162212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 126 - 198
Target Start/End: Complemental strand, 18423389 - 18423317
Alignment:
Q  126 agttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttgttta 198  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  18423389 agttgtcatttgtcaatgagttgttaataaagaactaagtgaagtattaatatttattaatcattgttgttta 18423317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 123 - 215
Target Start/End: Original strand, 18876084 - 18876176
Alignment:
Q  123 ttaagttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttgtttaagttattatgagatgat 215  Q
    |||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||| |||||||||| ||  ||||||||||||    
T  18876084 ttaagttgtcatttgtcaatgagttgttaatagagaactaagtgaagtattaatatttattaatcgttgttgtttatgtcgttatgagatgat 18876176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 123 - 215
Target Start/End: Original strand, 36686436 - 36686528
Alignment:
Q  123 ttaagttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttgtttaagttattatgagatgat 215  Q
    |||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||| |||||||||| ||  ||||||||||||    
T  36686436 ttaagttgtcatttgtcaatgagttgttaatagagaactaagtgaagtattaatatttattaatcgttgttgtttatgtcgttatgagatgat 36686528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 123 - 215
Target Start/End: Complemental strand, 48811654 - 48811562
Alignment:
Q  123 ttaagttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttgtttaagttattatgagatgat 215  Q
    ||||||||||| || ||||||||||||||||||||||||||||||| |||||||||||||||||| | |||||||| ||||||||||||||||    
T  48811654 ttaagttgtcaattatcaatgagttgttaataaagaactaagtgaagtattaatatttattaatcttggttgtttatgttattatgagatgat 48811562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 5 - 114
Target Start/End: Complemental strand, 15116561 - 15116452
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaatttattcatgtttttca 104  Q
    ||||||||||||| || |||||||||||||||| ||||||| |||||| ||||||||||||||||| ||| |||||||||||  || || ||||||||||    
T  15116561 agatgtttaagtgctgcctatgttgctgttgtttgttatgtgaaatgtgcatatgccttatgtggaaaatgtatgatgtttacgttgttgatgtttttca 15116462  T
Q  105 ttaatattgt 114  Q
    ||||||||||    
T  15116461 ttaatattgt 15116452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 5 - 114
Target Start/End: Complemental strand, 16998673 - 16998564
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaatttattcatgtttttca 104  Q
    ||||||||||||| || |||||||||||||||||||||||| |||| || ||||||||||||| || |||||||||||||||| || || ||| ||||||    
T  16998673 agatgtttaagtgctgcctatgttgctgttgttggttatgtgaaatatttatatgccttatgttgaaaatatatgatgtttaagttgttgatgcttttca 16998574  T
Q  105 ttaatattgt 114  Q
    ||||||||||    
T  16998573 ttaatattgt 16998564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 123 - 216
Target Start/End: Original strand, 43277979 - 43278072
Alignment:
Q  123 ttaagttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttgtttaagttattatgagatgata 216  Q
    ||||||||||||||||||||||||||||||||||||| |||| ||| |||||||||||||||||| |||||||||| ||  |||||||||||||    
T  43277979 ttaagttgtcatttgtcaatgagttgttaataaagaaataagagaagtattaatatttattaatcgttgttgtttatgtcgttatgagatgata 43278072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 141 - 215
Target Start/End: Original strand, 12757354 - 12757428
Alignment:
Q  141 atgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttgtttaagttattatgagatgat 215  Q
    |||||||||||||||||||||||||||| |||||||||||||||||| |||||||||| ||||||||||||||||    
T  12757354 atgagttgttaataaagaactaagtgaagtattaatatttattaatcgttgttgtttatgttattatgagatgat 12757428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 126 - 198
Target Start/End: Complemental strand, 18639946 - 18639874
Alignment:
Q  126 agttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttgttta 198  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||  ||||||||||||||||    
T  18639946 agttgtcatttgtcaatgagttgttaataaagaactaagtgaagtattaatattttctaatcattgttgttta 18639874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 126 - 198
Target Start/End: Original strand, 37728106 - 37728178
Alignment:
Q  126 agttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttgttta 198  Q
    ||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||| |||||||    
T  37728106 agttgtcatttgtcaatgagttgttaataaagaactaagtgaagtgttaatatttattaatcattattgttta 37728178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 8 - 81
Target Start/End: Original strand, 14270069 - 14270142
Alignment:
Q  8 tgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgat 81  Q
    ||||||||||||| |||||||| ||||||||||||||| |||||||||||||| ||||||||||||||||||||    
T  14270069 tgtttaagtgttgcctatgttgttgttgttggttatgtgaaatgttcatatgctttatgtggagaatatatgat 14270142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 5 - 114
Target Start/End: Complemental strand, 14273595 - 14273486
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaatttattcatgtttttca 104  Q
    ||||||||| ||| || |||||||||||||||||||||||| |||| || |||| ||||||||||| ||| |||||||||||| || ||  |||||||||    
T  14273595 agatgtttacgtgctgcctatgttgctgttgttggttatgtgaaatatttatataccttatgtggaaaatgtatgatgtttaagttgttggtgtttttca 14273496  T
Q  105 ttaatattgt 114  Q
    ||||||||||    
T  14273495 ttaatattgt 14273486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 5 - 114
Target Start/End: Complemental strand, 16324131 - 16324023
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaatttattcatgtttttca 104  Q
    |||||||||||||||| |||||||||||||||||||||||| ||||||| ||||||||| |||||| |||  ||||||||||| || || ||| | ||||    
T  16324131 agatgtttaagtgttgcctatgttgctgttgttggttatgtgaaatgtt-atatgccttttgtggaaaatgcatgatgtttaagttgttgatgctcttca 16324033  T
Q  105 ttaatattgt 114  Q
    ||||||||||    
T  16324032 ttaatattgt 16324023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 5 - 114
Target Start/End: Original strand, 46580715 - 46580824
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaatttattcatgtttttca 104  Q
    ||||||||| ||| || |||||||||||||||||||||||| |||| || |||||||||||||||| ||| |||||||||||| || || ||| | ||||    
T  46580715 agatgtttacgtgctgcctatgttgctgttgttggttatgtgaaatatttatatgccttatgtggaaaatgtatgatgtttaagttgttgatgctcttca 46580814  T
Q  105 ttaatattgt 114  Q
    ||||||||||    
T  46580815 ttaatattgt 46580824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 123 - 207
Target Start/End: Complemental strand, 19281895 - 19281811
Alignment:
Q  123 ttaagttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttgtttaagttattat 207  Q
    ||||||||||||||||||||||||||||||| |||||||| | ||| |||||||||||||||||| |||||||||| ||| ||||    
T  19281895 ttaagttgtcatttgtcaatgagttgttaatgaagaactatgcgaagtattaatatttattaatcgttgttgtttatgttgttat 19281811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 123 - 207
Target Start/End: Complemental strand, 47093982 - 47093898
Alignment:
Q  123 ttaagttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttgtttaagttattat 207  Q
    |||||||||||||| |||||||||||||||  |||||||| |||||||||||||||||||||||| |||||||||| ||| ||||    
T  47093982 ttaagttgtcatttatcaatgagttgttaacgaagaactatgtgaaatattaatatttattaatcgttgttgtttatgttgttat 47093898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 141 - 215
Target Start/End: Complemental strand, 16458752 - 16458678
Alignment:
Q  141 atgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttgtttaagttattatgagatgat 215  Q
    |||||||||||||||||||||||| ||| |||||||||||||||||| |||||||||| |||||||||| |||||    
T  16458752 atgagttgttaataaagaactaagggaagtattaatatttattaatcgttgttgtttatgttattatgaaatgat 16458678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 5 - 114
Target Start/End: Complemental strand, 8940330 - 8940221
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaatttattcatgtttttca 104  Q
    ||||||||| ||| || |||||||||||||||||||||||| |||| || |||||| ||||||||| ||| |||||||||||| || || ||| | ||||    
T  8940330 agatgtttacgtgctgcctatgttgctgttgttggttatgtgaaatatttatatgcgttatgtggaaaatgtatgatgtttaagttgttgatgctcttca 8940231  T
Q  105 ttaatattgt 114  Q
    ||||||||||    
T  8940230 ttaatattgt 8940221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 110 - 207
Target Start/End: Original strand, 13150800 - 13150897
Alignment:
Q  110 attgtcattatatttaagttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttgtttaagttattat 207  Q
    ||||||||| |  ||||||||| |||| |||||||||||||||| |||||||| ||||| ||||||||||||||||||| ||||||||| ||| ||||    
T  13150800 attgtcattgtcgttaagttgtaatttatcaatgagttgttaatgaagaactatgtgaagtattaatatttattaatcactgttgtttatgttgttat 13150897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 5 - 114
Target Start/End: Complemental strand, 14258531 - 14258422
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaatttattcatgtttttca 104  Q
    ||||||||| ||| || |||||||||||||||||||||||| |||| || |||||||||||||||| ||| |||||||||| | || || ||| || |||    
T  14258531 agatgtttacgtgctgcctatgttgctgttgttggttatgtgaaatatttatatgccttatgtggaaaatgtatgatgtttgagttgttgatgcttctca 14258432  T
Q  105 ttaatattgt 114  Q
    ||||||||||    
T  14258431 ttaatattgt 14258422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 5 - 114
Target Start/End: Complemental strand, 32301368 - 32301259
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaatttattcatgtttttca 104  Q
    ||||||||| |||||| |||||||| ||||||||||||||| |||| || ||| |||||||||||| ||| |||||||||||| || || ||  ||||||    
T  32301368 agatgtttacgtgttgcctatgttgttgttgttggttatgtgaaatatttatacgccttatgtggaaaatgtatgatgtttaaattgttgatacttttca 32301269  T
Q  105 ttaatattgt 114  Q
    ||||||||||    
T  32301268 ttaatattgt 32301259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 126 - 198
Target Start/End: Original strand, 6170671 - 6170743
Alignment:
Q  126 agttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttgttta 198  Q
    |||||||||||  |||| ||||||||||||||||||||||||| |||||||||||||||||| ||||||||||    
T  6170671 agttgtcattttccaataagttgttaataaagaactaagtgaagtattaatatttattaatcgttgttgttta 6170743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 123 - 207
Target Start/End: Complemental strand, 12371119 - 12371035
Alignment:
Q  123 ttaagttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttgtttaagttattat 207  Q
    ||||||||| |||| |||||||||||||||| |||||||| ||||| |||||||||||||||||| |||||||||| ||| ||||    
T  12371119 ttaagttgtaatttatcaatgagttgttaatgaagaactatgtgaagtattaatatttattaatcgttgttgtttatgttgttat 12371035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 123 - 215
Target Start/End: Original strand, 17071448 - 17071540
Alignment:
Q  123 ttaagttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttgtttaagttattatgagatgat 215  Q
    |||||||||||||| |||||||||||||||||| |||||| ||||| |||||||||||||||| ||||||| || | ||| |||| |||||||    
T  17071448 ttaagttgtcatttatcaatgagttgttaataaggaactatgtgaactattaatatttattaaacattgtttttcatgttgttataagatgat 17071540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 123 - 207
Target Start/End: Original strand, 36705869 - 36705953
Alignment:
Q  123 ttaagttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttgtttaagttattat 207  Q
    ||||||| |||||| ||||||||||||||||||||||||| ||||| ||||||||||||||||||  ||||||||| ||| ||||    
T  36705869 ttaagttatcatttatcaatgagttgttaataaagaactatgtgaattattaatatttattaatcgctgttgtttatgttgttat 36705953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 123 - 207
Target Start/End: Complemental strand, 44373790 - 44373706
Alignment:
Q  123 ttaagttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttgtttaagttattat 207  Q
    ||||||||| |||| |||||||||||||||| |||||||| ||||| |||||||||||||||||| |||||||||| ||| ||||    
T  44373790 ttaagttgtaatttatcaatgagttgttaatgaagaactatgtgaagtattaatatttattaatcgttgttgtttatgttgttat 44373706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 123 - 207
Target Start/End: Complemental strand, 44382655 - 44382571
Alignment:
Q  123 ttaagttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttgtttaagttattat 207  Q
    ||||||||| |||| |||||||||||||||| |||||||| ||||| |||||||||||||||||| |||||||||| ||| ||||    
T  44382655 ttaagttgtaatttatcaatgagttgttaatgaagaactatgtgaagtattaatatttattaatcgttgttgtttatgttgttat 44382571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 135 - 198
Target Start/End: Complemental strand, 15439321 - 15439258
Alignment:
Q  135 ttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttgttta 198  Q
    |||||||||| ||||||||||||||||||||||| |||||||||||||||||| ||||||||||    
T  15439321 ttgtcaatgacttgttaataaagaactaagtgaagtattaatatttattaatcgttgttgttta 15439258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 123 - 193
Target Start/End: Original strand, 13699914 - 13699984
Alignment:
Q  123 ttaagttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgtt 193  Q
    |||||||||||||| |||||||||||||||| |||||||| ||||| |||||||||||||||||| |||||    
T  13699914 ttaagttgtcatttatcaatgagttgttaatgaagaactatgtgaagtattaatatttattaatcgttgtt 13699984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 114
Target Start/End: Original strand, 13918565 - 13918674
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaatttattcatgtttttca 104  Q
    ||||||||| |||| | |||||||||||||||||||||||| |||| || ||||||||||| |||| ||| |||||||||||| || || ||| ||  ||    
T  13918565 agatgtttacgtgtcgcctatgttgctgttgttggttatgtgaaatatttatatgccttatatggaaaatgtatgatgtttaagttgttgatgcttcaca 13918664  T
Q  105 ttaatattgt 114  Q
    ||||||||||    
T  13918665 ttaatattgt 13918674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 114
Target Start/End: Complemental strand, 15720076 - 15719967
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaatttattcatgtttttca 104  Q
    ||||||||| ||| ||  |||||| |||||||||||||||| |||| || |||||||||||||| | ||| |||||||||||| || || ||| ||||||    
T  15720076 agatgtttacgtgctgcatatgtttctgttgttggttatgtgaaatatttatatgccttatgtgaaaaatgtatgatgtttaagttgttgatgcttttca 15719977  T
Q  105 ttaatattgt 114  Q
    ||||||||||    
T  15719976 ttaatattgt 15719967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 5 - 113
Target Start/End: Original strand, 1858871 - 1858979
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaatttattcatgtttttca 104  Q
    ||||||||| |||| | |||||||| ||||||||||||||| |||| || |||||||||||||||| ||| |||||||||||| || || ||| ||  ||    
T  1858871 agatgtttacgtgtcgcctatgttgttgttgttggttatgtgaaatatttatatgccttatgtggaaaatgtatgatgtttaagttgttgatgcttcaca 1858970  T
Q  105 ttaatattg 113  Q
    |||||||||    
T  1858971 ttaatattg 1858979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 123 - 207
Target Start/End: Complemental strand, 11066243 - 11066159
Alignment:
Q  123 ttaagttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttgtttaagttattat 207  Q
    |||||||||  ||| |||||||||||||||| |||||||| ||||| |||||||||||||||||| |||||||||| ||| ||||    
T  11066243 ttaagttgtagtttatcaatgagttgttaatgaagaactatgtgaagtattaatatttattaatcgttgttgtttatgttgttat 11066159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 16 - 114
Target Start/End: Original strand, 2530187 - 2530284
Alignment:
Q  16 tgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaatttattcatgtttttcattaatattgt 114  Q
    ||||| |||||||||||||||||||||||| |||| || |||||||||||||||| ||| |||||||||||| || || ||| ||  ||||||||||||    
T  2530187 tgttgcctatgttgctgttgttggttatgtgaaatatt-atatgccttatgtggaaaatgtatgatgtttaagttgttgatgcttcacattaatattgt 2530284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 5 - 114
Target Start/End: Complemental strand, 33092 - 32983
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaatttattcatgtttttca 104  Q
    ||||||||| |||| | |||||||||||||||||||||||| |||| || ||||||||||||||||  || | |||||||||| || || ||| ||  ||    
T  33092 agatgtttatgtgtcgcctatgttgctgttgttggttatgtgaaatatttatatgccttatgtggaagatgtttgatgtttaagttgttgatgcttcaca 32993  T
Q  105 ttaatattgt 114  Q
    ||||||||||    
T  32992 ttaatattgt 32983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 5 - 114
Target Start/End: Original strand, 12704780 - 12704889
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaatttattcatgtttttca 104  Q
    ||||||||| |||| | |||||||||||||||||||||||| |||| || ||||||||||||||||  || | |||||||||| || || ||| ||  ||    
T  12704780 agatgtttatgtgtcgcctatgttgctgttgttggttatgtgaaatatttatatgccttatgtggaagatgtttgatgtttaagttgttgatgcttcaca 12704879  T
Q  105 ttaatattgt 114  Q
    ||||||||||    
T  12704880 ttaatattgt 12704889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 5 - 114
Target Start/End: Complemental strand, 12714849 - 12714740
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaatttattcatgtttttca 104  Q
    ||||||||| |||| | |||||||||||||||||||||||| |||| || ||||||||||||||||  || | |||||||||| || || ||| ||  ||    
T  12714849 agatgtttatgtgtcgcctatgttgctgttgttggttatgtgaaatatttatatgccttatgtggaagatgtttgatgtttaagttgttgatgcttcaca 12714750  T
Q  105 ttaatattgt 114  Q
    ||||||||||    
T  12714749 ttaatattgt 12714740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 5 - 114
Target Start/End: Complemental strand, 12718653 - 12718544
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaatttattcatgtttttca 104  Q
    ||||||||| |||| | |||||||||||||||||||||||| |||| || ||||||||||||||||  || | |||||||||| || || ||| ||  ||    
T  12718653 agatgtttatgtgtcgcctatgttgctgttgttggttatgtgaaatatttatatgccttatgtggaagatgtttgatgtttaagttgttgatgcttcaca 12718554  T
Q  105 ttaatattgt 114  Q
    ||||||||||    
T  12718553 ttaatattgt 12718544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 5 - 114
Target Start/End: Original strand, 16460805 - 16460914
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaatttattcatgtttttca 104  Q
    ||||||||| ||| || |||||||| ||||||| ||||||| |||| || |||||||||||||||| ||| |||||||||||| || || ||| || |||    
T  16460805 agatgtttacgtgctgcctatgttgttgttgttagttatgtgaaatatttatatgccttatgtggaaaatgtatgatgtttaagttgttgatgcttctca 16460904  T
Q  105 ttaatattgt 114  Q
    | ||||||||    
T  16460905 tcaatattgt 16460914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 5 - 114
Target Start/End: Complemental strand, 16579839 - 16579730
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaatttattcatgtttttca 104  Q
    ||||||||| ||| || |||||||||||||||||||||||| |||| || ||| |||||||||| | ||| ||| |||||||| || || ||| || |||    
T  16579839 agatgtttacgtgctgcctatgttgctgttgttggttatgtgaaatatttatacgccttatgtgtaaaatgtattatgtttaagttgttgatgcttctca 16579740  T
Q  105 ttaatattgt 114  Q
    ||||||||||    
T  16579739 ttaatattgt 16579730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 5 - 114
Target Start/End: Original strand, 16585824 - 16585933
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaatttattcatgtttttca 104  Q
    ||||||||| ||| || |||||||||||||||||||||||| |||| || ||| |||||||||| | ||| ||| |||||||| || || ||| || |||    
T  16585824 agatgtttacgtgctgcctatgttgctgttgttggttatgtgaaatatttatacgccttatgtgtaaaatgtattatgtttaagttgttgatgcttctca 16585923  T
Q  105 ttaatattgt 114  Q
    ||||||||||    
T  16585924 ttaatattgt 16585933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 5 - 114
Target Start/End: Original strand, 16907322 - 16907431
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaatttattcatgtttttca 104  Q
    ||||||||| |||| | |||||||||||||||||||||||| |||| || ||||||||||||||||  || | |||||||||| || || ||| ||  ||    
T  16907322 agatgtttatgtgtcgcctatgttgctgttgttggttatgtgaaatatttatatgccttatgtggaagatgtttgatgtttaagttgttgatgcttcaca 16907421  T
Q  105 ttaatattgt 114  Q
    ||||||||||    
T  16907422 ttaatattgt 16907431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 5 - 114
Target Start/End: Complemental strand, 18279388 - 18279279
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaatttattcatgtttttca 104  Q
    ||||||||| |||| | |||||||||||||||||||||||| |||| || ||||||||||||||||  || | |||||||||| || || ||| ||  ||    
T  18279388 agatgtttatgtgtcgcctatgttgctgttgttggttatgtgaaatatttatatgccttatgtggaagatgtttgatgtttaagttgttgatgcttcaca 18279289  T
Q  105 ttaatattgt 114  Q
    ||||||||||    
T  18279288 ttaatattgt 18279279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 5 - 114
Target Start/End: Complemental strand, 18283351 - 18283242
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaatttattcatgtttttca 104  Q
    ||||||||| |||| | |||||||||||||||||||||||| |||| || ||||||||||||||||  || | |||||||||| || || ||| ||  ||    
T  18283351 agatgtttatgtgtcgcctatgttgctgttgttggttatgtgaaatatttatatgccttatgtggaagatgtttgatgtttaagttgttgatgcttcaca 18283252  T
Q  105 ttaatattgt 114  Q
    ||||||||||    
T  18283251 ttaatattgt 18283242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 5 - 114
Target Start/End: Original strand, 25927288 - 25927397
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaatttattcatgtttttca 104  Q
    ||||||||| |||| | |||||||||||||||||||||||| |||| || ||||| ||||||||||  || |||||||||||| || || ||| ||  ||    
T  25927288 agatgtttacgtgtcgcctatgttgctgttgttggttatgtgaaatatttatatgtcttatgtggaagatgtatgatgtttaagttgttgatgcttcaca 25927387  T
Q  105 ttaatattgt 114  Q
    ||||||||||    
T  25927388 ttaatattgt 25927397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 123 - 207
Target Start/End: Original strand, 13133725 - 13133808
Alignment:
Q  123 ttaagttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttgtttaagttattat 207  Q
    |||||||||||||| |||||||||||||||| ||||| || ||||| |||||||| ||||||||| |||||||||| ||| ||||    
T  13133725 ttaagttgtcatttatcaatgagttgttaatgaagaaatatgtgaagtattaata-ttattaatcgttgttgtttatgttgttat 13133808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 123 - 207
Target Start/End: Original strand, 14220287 - 14220371
Alignment:
Q  123 ttaagttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttgtttaagttattat 207  Q
    |||||||||||||| |||||||||||||||   | ||||| ||||| |||||||||||||||||| |||||||||| ||| ||||    
T  14220287 ttaagttgtcatttatcaatgagttgttaacgtaaaactatgtgaagtattaatatttattaatcgttgttgtttatgttgttat 14220371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 123 - 207
Target Start/End: Original strand, 15120552 - 15120636
Alignment:
Q  123 ttaagttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttgtttaagttattat 207  Q
    ||||||||| |||| |||||||||| ||||| || ||||| ||||| |||||||||||||||||| |||||||||| ||| ||||    
T  15120552 ttaagttgttatttatcaatgagttattaatgaaaaactatgtgaagtattaatatttattaatcgttgttgtttatgttgttat 15120636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 5 - 109
Target Start/End: Original strand, 17060464 - 17060568
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaatttattcatgtttttca 104  Q
    ||||||||| ||| ||  ||||||| ||||||||||||||| |||| || |||| ||||||||||| ||| |||||||||||| || || ||| ||||||    
T  17060464 agatgtttatgtgctgcatatgttgttgttgttggttatgtgaaatatttatattccttatgtggaaaatgtatgatgtttaagttgttgatgcttttca 17060563  T
Q  105 ttaat 109  Q
    |||||    
T  17060564 ttaat 17060568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 123 - 207
Target Start/End: Original strand, 32434866 - 32434950
Alignment:
Q  123 ttaagttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttgtttaagttattat 207  Q
    ||||||||| |||| | |||||||||||||| |||||||| ||||| |||||||||||||||||| || ||||||| ||| ||||    
T  32434866 ttaagttgtaatttattaatgagttgttaatgaagaactatgtgaagtattaatatttattaatcgtttttgtttatgttgttat 32434950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 123 - 207
Target Start/End: Original strand, 37785551 - 37785635
Alignment:
Q  123 ttaagttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttgtttaagttattat 207  Q
    |||||||||||||| |||||||||||||||  |||||||| | ||| |||||| ||||||||||| |||||||||| ||| ||||    
T  37785551 ttaagttgtcatttatcaatgagttgttaacgaagaactatgagaagtattaacatttattaatcgttgttgtttatgttgttat 37785635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 87
Target Start/End: Original strand, 70886 - 70968
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaa 87  Q
    ||||||||| |||| | |||||||||||||||||||||||| |||| || ||||||||||||||||  || | ||||||||||    
T  70886 agatgtttatgtgtcgcctatgttgctgttgttggttatgtgaaatatttatatgccttatgtggaagatgtttgatgtttaa 70968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 87
Target Start/End: Original strand, 74995 - 75077
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaa 87  Q
    ||||||||| |||| | |||||||||||||||||||||||| |||| || ||||||||||||||||  || | ||||||||||    
T  74995 agatgtttatgtgtcgcctatgttgctgttgttggttatgtgaaatatttatatgccttatgtggaagatgtttgatgtttaa 75077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 87
Target Start/End: Complemental strand, 12723564 - 12723482
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaa 87  Q
    ||||||||| |||| | |||||||||||||||||||||||| |||| || ||||||||||||||||  || | ||||||||||    
T  12723564 agatgtttatgtgtcgcctatgttgctgttgttggttatgtgaaatatttatatgccttatgtggaagatgtttgatgtttaa 12723482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 87
Target Start/End: Complemental strand, 39722251 - 39722169
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaa 87  Q
    ||||||||| |||| | |||||||||||||||||||||||| ||||  | ||||||||||||||||  || ||||||||||||    
T  39722251 agatgtttatgtgtcgcctatgttgctgttgttggttatgtgaaatacttatatgccttatgtggaagatgtatgatgtttaa 39722169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 87
Target Start/End: Original strand, 45170127 - 45170209
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaa 87  Q
    ||||||||| |||| | |||||||||||||||||||||||| |||| || ||||| ||||||||||  || ||||||||||||    
T  45170127 agatgtttacgtgtcgcctatgttgctgttgttggttatgtgaaatatttatatgacttatgtggaagatgtatgatgtttaa 45170209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 5 - 114
Target Start/End: Complemental strand, 26292380 - 26292271
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaatttattcatgtttttca 104  Q
    ||||||||| |||| ||| |||||| ||||||||||||||| |||| || ||||||||||||||||  || | |||||||||| || || ||| ||  ||    
T  26292380 agatgtttatgtgtcgtcaatgttgatgttgttggttatgtgaaatatttatatgccttatgtggaagatgtttgatgtttaagttgttgatgcttcaca 26292281  T
Q  105 ttaatattgt 114  Q
    ||||||||||    
T  26292280 ttaatattgt 26292271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 31 - 114
Target Start/End: Original strand, 16550712 - 16550795
Alignment:
Q  31 tgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaatttattcatgtttttcattaatattgt 114  Q
    ||||||||||||||| ||||  | |||||||||||||||| ||  |||||||||||| || || ||| ||||||||||||||||    
T  16550712 tgttgttggttatgtgaaataattatatgccttatgtggaaaacgtatgatgtttaagttgttgatgcttttcattaatattgt 16550795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 31 - 114
Target Start/End: Complemental strand, 16614950 - 16614867
Alignment:
Q  31 tgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaatttattcatgtttttcattaatattgt 114  Q
    ||||||||||||||| ||||  | |||||||||||||||| ||  |||||||||||| || || ||| ||||||||||||||||    
T  16614950 tgttgttggttatgtgaaataattatatgccttatgtggaaaacgtatgatgtttaagttgttgatgcttttcattaatattgt 16614867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 31 - 114
Target Start/End: Original strand, 32160910 - 32160992
Alignment:
Q  31 tgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaatttattcatgtttttcattaatattgt 114  Q
    ||||||||||||||| ||||  | |||||||||||||||| | | |||||||||||| || || ||||||||||||||||||||    
T  32160910 tgttgttggttatgtgaaataattatatgccttatgtgga-attgtatgatgtttaagttgttgatgtttttcattaatattgt 32160992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 87
Target Start/End: Complemental strand, 20487622 - 20487540
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaa 87  Q
    |||| |||| ||| || |||||||||||||||||||||||| |||| || ||||| |||||||||| ||| || |||||||||    
T  20487622 agatatttatgtgctgcctatgttgctgttgttggttatgtgaaatatttatatggcttatgtggaaaatgtacgatgtttaa 20487540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 123 - 207
Target Start/End: Complemental strand, 20619060 - 20618976
Alignment:
Q  123 ttaagttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttgtttaagttattat 207  Q
    ||||||||| |||| |||||||||||||||| || |||||  |||| ||||||||||| |||||| || ||||||| ||| ||||    
T  20619060 ttaagttgtaatttatcaatgagttgttaatgaataactatttgaagtattaatattttttaatcgtttttgtttatgttgttat 20618976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 114
Target Start/End: Complemental strand, 16114226 - 16114117
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaatttattcatgtttttca 104  Q
    ||||||| | |||| | |||||||| |||||||| |||||| |||| || ||||||||||||||||  || | |||||||||| || || ||| ||  ||    
T  16114226 agatgttcatgtgtcgcctatgttgttgttgttgattatgtgaaatatttatatgccttatgtggaagatgtttgatgtttaagttgttgatgcttcaca 16114127  T
Q  105 ttaatattgt 114  Q
    ||||||||||    
T  16114126 ttaatattgt 16114117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 114
Target Start/End: Complemental strand, 16117379 - 16117270
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaatttattcatgtttttca 104  Q
    ||||||| | |||| | |||||||| |||||||| |||||| |||| || ||||||||||||||||  || | |||||||||| || || ||| ||  ||    
T  16117379 agatgttcatgtgtcgcctatgttgttgttgttgattatgtgaaatatttatatgccttatgtggaagatgtttgatgtttaagttgttgatgcttcaca 16117280  T
Q  105 ttaatattgt 114  Q
    ||||||||||    
T  16117279 ttaatattgt 16117270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 196 - 234
Target Start/End: Complemental strand, 8467950 - 8467912
Alignment:
Q  196 ttaagttattatgagatgataaatatgtgttgttatatt 234  Q
    |||||||||||||||||||| ||||||| ||||||||||    
T  8467950 ttaagttattatgagatgatgaatatgtattgttatatt 8467912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 103; Significance: 2e-51; HSPs: 47)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 123 - 233
Target Start/End: Original strand, 46383086 - 46383196
Alignment:
Q  123 ttaagttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttgtttaagttattatgagatgataaatatg 222  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  46383086 ttaagttgtcatttgtcaatgagttgttaataaagaactaagtgaagtattaatatttattaatcgttgttgtttaagttattatgagatgataaatatg 46383185  T
Q  223 tgttgttatat 233  Q
    |||||||||||    
T  46383186 tgttgttatat 46383196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 123 - 234
Target Start/End: Original strand, 41306124 - 41306235
Alignment:
Q  123 ttaagttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttgtttaagttattatgagatgataaatatg 222  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||  ||||||||||||||||||||||||||||||||||    
T  41306124 ttaagttgtcatttgtcaatgagttgttaataaagaactaagtgaagtattaatatttattaattgttgttgtttaagttattatgagatgataaatatg 41306223  T
Q  223 tgttgttatatt 234  Q
    ||||||||||||    
T  41306224 tgttgttatatt 41306235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 123 - 215
Target Start/End: Original strand, 7053240 - 7053332
Alignment:
Q  123 ttaagttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttgtttaagttattatgagatgat 215  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||  ||||||||||||    
T  7053240 ttaagttgtcatttgtcaatgagttgttaataaagaactaagtgaagtattaatatttattaatcattgttgtttatgtcgttatgagatgat 7053332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 5 - 114
Target Start/End: Complemental strand, 51326873 - 51326764
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaatttattcatgtttttca 104  Q
    ||||||||| ||| ||||||||||||||||||||||||||| ||||||| |||||||||||||||| ||| |||||||||||| || || ||| ||||||    
T  51326873 agatgtttaggtgctgtctatgttgctgttgttggttatgtgaaatgtttatatgccttatgtggaaaatgtatgatgtttaagttgttgatgcttttca 51326774  T
Q  105 ttaatattgt 114  Q
    ||||||||||    
T  51326773 ttaatattgt 51326764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 123 - 215
Target Start/End: Original strand, 16059564 - 16059656
Alignment:
Q  123 ttaagttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttgtttaagttattatgagatgat 215  Q
    |||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| |||||||||| ||  ||||||||||||    
T  16059564 ttaagttgtcatttgtcaatgagttgttaataaagaactaagcgaagtattaatatttattaatcgttgttgtttatgtcgttatgagatgat 16059656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 5 - 114
Target Start/End: Complemental strand, 12271635 - 12271526
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaatttattcatgtttttca 104  Q
    ||||||||||||| || |||||||||||||||||||||||| |||||||||||||||||||||||| ||| |||||||||||| || || ||  ||||||    
T  12271635 agatgtttaagtgctgcctatgttgctgttgttggttatgtgaaatgttcatatgccttatgtggaaaatgtatgatgtttaagttgttgatacttttca 12271536  T
Q  105 ttaatattgt 114  Q
    ||||| ||||    
T  12271535 ttaattttgt 12271526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 5 - 114
Target Start/End: Original strand, 27653262 - 27653371
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaatttattcatgtttttca 104  Q
    ||||||||||||| || |||||||||||||||||||||||| |||| || ||||||||||||| || |||||||||||||||| || || ||| ||||||    
T  27653262 agatgtttaagtgctgcctatgttgctgttgttggttatgtgaaatatttatatgccttatgtagaaaatatatgatgtttaagttgttgatgcttttca 27653361  T
Q  105 ttaatattgt 114  Q
    ||||||||||    
T  27653362 ttaatattgt 27653371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 126 - 198
Target Start/End: Complemental strand, 43690441 - 43690369
Alignment:
Q  126 agttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttgttta 198  Q
    ||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||    
T  43690441 agttgtcatttgtcaatgagttgttaataaagaactaagtgaagtgttaatatttattaatcattgttgttta 43690369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 126 - 195
Target Start/End: Complemental strand, 20636457 - 20636388
Alignment:
Q  126 agttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttgt 195  Q
    ||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||    
T  20636457 agttgtcatttgtcaatgagttgttaataaagaactaagtgaagtgttaatatttattaatcattgttgt 20636388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 8 - 81
Target Start/End: Complemental strand, 43543206 - 43543133
Alignment:
Q  8 tgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgat 81  Q
    |||||||||| || |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  43543206 tgtttaagtgctgcctatgttgctgttgttggttatgtgaaatgttcatatgccttatgtggagaatatatgat 43543133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 123 - 207
Target Start/End: Original strand, 38888308 - 38888392
Alignment:
Q  123 ttaagttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttgtttaagttattat 207  Q
    |||||||||||||| ||||||||||||||||||||||||| ||||| |||||||||||||||||| |||||||||| ||| ||||    
T  38888308 ttaagttgtcatttatcaatgagttgttaataaagaactatgtgaagtattaatatttattaatcgttgttgtttatgttgttat 38888392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 123 - 198
Target Start/End: Original strand, 8277151 - 8277226
Alignment:
Q  123 ttaagttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttgttta 198  Q
    |||||||||||||| |||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||||||    
T  8277151 ttaagttgtcatttatcaatgagttgttaatgaagaactatgtgaagtattaatatttattaatcattgttgttta 8277226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 4 - 114
Target Start/End: Original strand, 13881420 - 13881530
Alignment:
Q  4 aagatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaatttattcatgtttttc 103  Q
    |||||||||| ||| || |||||||||||||||||||||||| |||| || |||||||||||||||| ||| |||||||||||| || ||  || |||||    
T  13881420 aagatgtttatgtgatgcctatgttgctgttgttggttatgtgaaatatttatatgccttatgtggaaaatgtatgatgtttaagttgttggtgcttttc 13881519  T
Q  104 attaatattgt 114  Q
    |||||||||||    
T  13881520 attaatattgt 13881530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 123 - 207
Target Start/End: Original strand, 24723815 - 24723899
Alignment:
Q  123 ttaagttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttgtttaagttattat 207  Q
    |||||||||||||| |||||||||||||||| |||||||| ||||| |||||||||||||||||| |||||||||| ||| ||||    
T  24723815 ttaagttgtcatttatcaatgagttgttaatgaagaactatgtgaagtattaatatttattaatcgttgttgtttatgttgttat 24723899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 126 - 194
Target Start/End: Original strand, 28195018 - 28195086
Alignment:
Q  126 agttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttg 194  Q
    |||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||| ||||||    
T  28195018 agttgtcatttgccaatgagttgttaataaagaactaagtgaagtattaatatttattaatcgttgttg 28195086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 123 - 215
Target Start/End: Complemental strand, 20587547 - 20587457
Alignment:
Q  123 ttaagttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttgtttaagttattatgagatgat 215  Q
    ||||||||||||||||||||||| |  |||| |||||||| ||||| |||||||||||||||||| |||||||||| ||||||||||| ||||    
T  20587547 ttaagttgtcatttgtcaatgagat--taatgaagaactatgtgaagtattaatatttattaatcgttgttgtttatgttattatgaggtgat 20587457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 123 - 215
Target Start/End: Complemental strand, 20592085 - 20591995
Alignment:
Q  123 ttaagttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttgtttaagttattatgagatgat 215  Q
    ||||||||||||||||||||||| |  |||| |||||||| ||||| |||||||||||||||||| |||||||||| ||||||||||| ||||    
T  20592085 ttaagttgtcatttgtcaatgagat--taatgaagaactatgtgaagtattaatatttattaatcgttgttgtttatgttattatgaggtgat 20591995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 123 - 207
Target Start/End: Complemental strand, 1642337 - 1642253
Alignment:
Q  123 ttaagttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttgtttaagttattat 207  Q
    |||||||||||||| |||||||||||||||  |||||||| ||||| ||||||||||| |||||| |||||||||| ||| ||||    
T  1642337 ttaagttgtcatttatcaatgagttgttaacgaagaactatgtgaagtattaatattttttaatcgttgttgtttatgttgttat 1642253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 123 - 207
Target Start/End: Original strand, 20634809 - 20634893
Alignment:
Q  123 ttaagttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttgtttaagttattat 207  Q
    ||||||||||||||||||| | ||| ||||| |||||||| ||||| |||||||||||||||||| |||||||||| ||| ||||    
T  20634809 ttaagttgtcatttgtcaacgtgttattaatgaagaactatgtgaagtattaatatttattaatctttgttgtttatgttgttat 20634893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 123 - 207
Target Start/End: Original strand, 41227928 - 41228012
Alignment:
Q  123 ttaagttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttgtttaagttattat 207  Q
    ||||||| | |||| |||||||||||||||| |||||||| ||||| |||||||||||||||||| |||||||||| ||| ||||    
T  41227928 ttaagttataatttatcaatgagttgttaatgaagaactatgtgaagtattaatatttattaatcgttgttgtttatgttgttat 41228012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 5 - 114
Target Start/End: Complemental strand, 21407340 - 21407231
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaatttattcatgtttttca 104  Q
    ||||||||| |||| | |||||||||||||||||||||||| |||| || ||||||||||||||||  || | |||||||||| || || ||| ||  ||    
T  21407340 agatgtttatgtgtcgcctatgttgctgttgttggttatgtgaaatatttatatgccttatgtggaagatgtttgatgtttaagttgttgatgcttcaca 21407241  T
Q  105 ttaatattgt 114  Q
    ||||||||||    
T  21407240 ttaatattgt 21407231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 5 - 114
Target Start/End: Complemental strand, 48603533 - 48603424
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaatttattcatgtttttca 104  Q
    ||||||||| ||| || |||||||||||||||||| ||||| |||| || ||||||||||||||||  || |||||||||||| || || ||| ||  ||    
T  48603533 agatgtttacgtgctgcctatgttgctgttgttggctatgtgaaatatttatatgccttatgtggaagatgtatgatgtttaagttgttgatgcttcaca 48603434  T
Q  105 ttaatattgt 114  Q
    ||||||||||    
T  48603433 ttaatattgt 48603424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 123 - 207
Target Start/End: Complemental strand, 22349451 - 22349367
Alignment:
Q  123 ttaagttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttgtttaagttattat 207  Q
    |||||||||||||| |||||||||||||||| ||||||||  ||||  ||||||||||||||||  |||||||||| ||| ||||    
T  22349451 ttaagttgtcatttatcaatgagttgttaatgaagaactatttgaagaattaatatttattaattgttgttgtttatgttgttat 22349367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 23 - 87
Target Start/End: Complemental strand, 33797584 - 33797520
Alignment:
Q  23 tatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaa 87  Q
    ||||||||||||||||||||||| |||| || |||||||||||||||| ||| ||||||||||||    
T  33797584 tatgttgctgttgttggttatgtgaaatatttatatgccttatgtggaaaatgtatgatgtttaa 33797520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 123 - 215
Target Start/End: Original strand, 38057848 - 38057940
Alignment:
Q  123 ttaagttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttgtttaagttattatgagatgat 215  Q
    |||||||||||||||||| |||||||||||||| ||||||  |||| ||||||||||||||||   |||||||| | ||| |||| |||||||    
T  38057848 ttaagttgtcatttgtcactgagttgttaataaggaactacctgaagtattaatatttattaaatgttgttgttcatgttgttataagatgat 38057940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 22 - 85
Target Start/End: Original strand, 22130963 - 22131026
Alignment:
Q  22 ctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgttt 85  Q
    |||||||||||||||||||||||| |||| || |||||||||||||||| ||| ||||||||||    
T  22130963 ctatgttgctgttgttggttatgtgaaatatttatatgccttatgtggaaaatgtatgatgttt 22131026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 22 - 113
Target Start/End: Complemental strand, 48520575 - 48520484
Alignment:
Q  22 ctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaatttattcatgtttttcattaatattg 113  Q
    ||||||||||| |||||||||||| |||| || |||||||||||||||| ||| ||| |||||||| || || ||| || ||||||||||||    
T  48520575 ctatgttgctgctgttggttatgtgaaatatttatatgccttatgtggaaaatgtataatgtttaagttgttgatgcttctcattaatattg 48520484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 87
Target Start/End: Original strand, 1925250 - 1925332
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaa 87  Q
    ||||||||| |||| | |||||||||||||||||||||||| |||| || ||||| ||||||||||  || ||||||||||||    
T  1925250 agatgtttacgtgtcgcctatgttgctgttgttggttatgtgaaatatttatatgacttatgtggaagatgtatgatgtttaa 1925332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 87
Target Start/End: Original strand, 20228930 - 20229012
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaa 87  Q
    ||||||||| |||| | |||||||||||||||||||||||| |||| || ||||||||||||||||  || | ||||||||||    
T  20228930 agatgtttatgtgtcgcctatgttgctgttgttggttatgtgaaatatttatatgccttatgtggaagatgtttgatgtttaa 20229012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 87
Target Start/End: Original strand, 20924264 - 20924346
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaa 87  Q
    ||||||||| |||| | |||||||||||||||||||||||| |||| || ||||| ||||||||||  || ||||||||||||    
T  20924264 agatgtttacgtgtcgcctatgttgctgttgttggttatgtgaaatatttatatgacttatgtggaagatgtatgatgtttaa 20924346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 5 - 114
Target Start/End: Complemental strand, 1010708 - 1010599
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaatttattcatgtttttca 104  Q
    ||||||||| |||| | |||||||| ||||||||||||||| |||| || ||||||||||||||||  || | |||||||||| || || ||| ||  ||    
T  1010708 agatgtttatgtgtcgcctatgttgttgttgttggttatgtgaaatatttatatgccttatgtggaagatgtttgatgtttaagttgttgatgcttcaca 1010609  T
Q  105 ttaatattgt 114  Q
    ||||||||||    
T  1010608 ttaatattgt 1010599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 5 - 114
Target Start/End: Original strand, 16375580 - 16375689
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaatttattcatgtttttca 104  Q
    ||||||||| |||| | |||||||| ||||||||||||||| |||| || ||||||||||||||||  || | |||||||||| || || ||| ||  ||    
T  16375580 agatgtttatgtgtcgcctatgttgttgttgttggttatgtgaaatatttatatgccttatgtggaagatgtttgatgtttaagttgttgatgcttcaca 16375679  T
Q  105 ttaatattgt 114  Q
    ||||||||||    
T  16375680 ttaatattgt 16375689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 123 - 179
Target Start/End: Original strand, 14793633 - 14793689
Alignment:
Q  123 ttaagttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatt 179  Q
    |||||||||||||| |||||||||||||||| |||||||| ||||| ||||||||||    
T  14793633 ttaagttgtcatttatcaatgagttgttaatgaagaactatgtgaagtattaatatt 14793689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 123 - 207
Target Start/End: Complemental strand, 51475869 - 51475785
Alignment:
Q  123 ttaagttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttgtttaagttattat 207  Q
    |||| ||||||||| |||||||||||||||  |||||||| | ||| |||||| ||||||||||| |||||||||| ||| ||||    
T  51475869 ttaatttgtcatttatcaatgagttgttaacgaagaactatgagaagtattaacatttattaatcgttgttgtttatgttgttat 51475785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 31 - 114
Target Start/End: Original strand, 29764346 - 29764429
Alignment:
Q  31 tgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaatttattcatgtttttcattaatattgt 114  Q
    ||||||||||||||| ||||  | |||||||||||||||| ||| |||||||||||| || || |||||||  |||||||||||    
T  29764346 tgttgttggttatgtgaaataattatatgccttatgtggaaaatgtatgatgtttaagttgttgatgttttcaattaatattgt 29764429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 31 - 114
Target Start/End: Original strand, 46198433 - 46198516
Alignment:
Q  31 tgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaatttattcatgtttttcattaatattgt 114  Q
    ||||||||||||||| ||||  | |||||||||||||||| ||| |||||||||||| || || | | ||||||||||||||||    
T  46198433 tgttgttggttatgtgaaataattatatgccttatgtggaaaatgtatgatgtttaagttgttgaggcttttcattaatattgt 46198516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 31 - 114
Target Start/End: Complemental strand, 50000817 - 50000734
Alignment:
Q  31 tgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaatttattcatgtttttcattaatattgt 114  Q
    ||||||||||||||| ||||  | |||||||||||||| | ||| |||||||||||| || || ||| ||||||||||||||||    
T  50000817 tgttgttggttatgtgaaataattatatgccttatgtgaaaaatgtatgatgtttaagttgttgatgattttcattaatattgt 50000734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 70
Target Start/End: Complemental strand, 52639526 - 52639461
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtgga 70  Q
    ||||||||| |||| | |||||||||||||||||||||||| |||| || ||| ||||||||||||    
T  52639526 agatgtttatgtgtcgcctatgttgctgttgttggttatgtgaaatatttatacgccttatgtgga 52639461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 123 - 179
Target Start/End: Original strand, 17904282 - 17904338
Alignment:
Q  123 ttaagttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatt 179  Q
    |||||||||||||| |||||||||||||||| |||||||| ||||| ||| ||||||    
T  17904282 ttaagttgtcatttatcaatgagttgttaatgaagaactatgtgaagtatcaatatt 17904338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 123 - 202
Target Start/End: Complemental strand, 13301671 - 13301593
Alignment:
Q  123 ttaagttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttgtttaagtt 202  Q
    ||||||||||| || ||||||||||| |||| |||||||| ||||| |||||||   ||||||| |||||||||||||||    
T  13301671 ttaagttgtcaattatcaatgagttgctaatgaagaactatgtgaagtattaat-gctattaattattgttgtttaagtt 13301593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 70
Target Start/End: Original strand, 41781630 - 41781693
Alignment:
Q  7 atgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtgga 70  Q
    ||||||| ||| || |||||||| ||||||||||||||| |||| || ||||||||||||||||    
T  41781630 atgtttatgtgctgcctatgttgttgttgttggttatgtgaaatatttatatgccttatgtgga 41781693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 196 - 234
Target Start/End: Original strand, 46383216 - 46383254
Alignment:
Q  196 ttaagttattatgagatgataaatatgtgttgttatatt 234  Q
    |||||||||||||||||||| ||||||||| ||||||||    
T  46383216 ttaagttattatgagatgatgaatatgtgtagttatatt 46383254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 198
Target Start/End: Complemental strand, 51323198 - 51323125
Alignment:
Q  124 taagttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttgttta 198  Q
    |||||||||| || |||||||||||||| | |||||||| ||||| |||||||  ||||||||  ||||||||||    
T  51323198 taagttgtcaattatcaatgagttgttagtgaagaactatgtgaagtattaat-gttattaattgttgttgttta 51323125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 201 - 234
Target Start/End: Original strand, 21740379 - 21740412
Alignment:
Q  201 ttattatgagatgataaatatgtgttgttatatt 234  Q
    ||||||| ||||||||||||||||||||||||||    
T  21740379 ttattataagatgataaatatgtgttgttatatt 21740412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 201 - 234
Target Start/End: Original strand, 21740444 - 21740477
Alignment:
Q  201 ttattatgagatgataaatatgtgttgttatatt 234  Q
    ||||||| ||||||||||||||||||||||||||    
T  21740444 ttattataagatgataaatatgtgttgttatatt 21740477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 179
Target Start/End: Complemental strand, 21238593 - 21238537
Alignment:
Q  123 ttaagttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatt 179  Q
    ||||||||||| || |||||||||||||||| ||||||||  ||||  |||||||||    
T  21238593 ttaagttgtcaattatcaatgagttgttaatgaagaactatatgaagaattaatatt 21238537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 175
Target Start/End: Complemental strand, 43542673 - 43542621
Alignment:
Q  123 ttaagttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaa 175  Q
    ||||||||| |||| |||||||||||||||| |||||||| | ||| ||||||    
T  43542673 ttaagttgtaatttatcaatgagttgttaatgaagaactatgcgaagtattaa 43542621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 100; Significance: 1e-49; HSPs: 52)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 123 - 234
Target Start/End: Complemental strand, 19857166 - 19857055
Alignment:
Q  123 ttaagttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttgtttaagttattatgagatgataaatatg 222  Q
    ||||||||||||||||||||||||||||||||||||| | |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19857166 ttaagttgtcatttgtcaatgagttgttaataaagaagttagtgaagtattaatatttattaatcattgttgtttaagttattatgagatgataaatatg 19857067  T
Q  223 tgttgttatatt 234  Q
    ||||||||||||    
T  19857066 tgttgttatatt 19857055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 123 - 234
Target Start/End: Complemental strand, 361839 - 361728
Alignment:
Q  123 ttaagttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttgtttaagttattatgagatgataaatatg 222  Q
    |||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||    
T  361839 ttaagttgtcatttgtcaataagttgttcataaagaactaagtgaaatattaatatttattaatcgttgttgtttaagttattatgaaatgataaatatg 361740  T
Q  223 tgttgttatatt 234  Q
    ||||||||||||    
T  361739 tgttgttatatt 361728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 8 - 117
Target Start/End: Complemental strand, 19857599 - 19857490
Alignment:
Q  8 tgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaatttattcatgtttttcatta 107  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| ||||| || || |||||||||||||    
T  19857599 tgtttaagtgttgtctatgttgctgttgttggttatgtgaaatgttcataagccttatgtggagaatatatgatatttaagttgttgatgtttttcatta 19857500  T
Q  108 atattgtcat 117  Q
    ||||||||||    
T  19857499 atattgtcat 19857490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 123 - 215
Target Start/End: Complemental strand, 9637710 - 9637618
Alignment:
Q  123 ttaagttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttgtttaagttattatgagatgat 215  Q
    ||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||| ||||||||||||||||    
T  9637710 ttaagttgtcaattgtcaatgagttgttaataaagaactaagtgaagtattaatatttattaatcgttgttgtttatgttattatgagatgat 9637618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 123 - 215
Target Start/End: Original strand, 33244428 - 33244520
Alignment:
Q  123 ttaagttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttgtttaagttattatgagatgat 215  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||| |||||||||| ||| ||||||||||||    
T  33244428 ttaagttgtcatttgtcattgagttgttaataaagaactaagtgaagtattaatatttattaatcgttgttgtttatgttgttatgagatgat 33244520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 123 - 215
Target Start/End: Original strand, 13037001 - 13037093
Alignment:
Q  123 ttaagttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttgtttaagttattatgagatgat 215  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||| ||  ||| ||||||||    
T  13037001 ttaagttgtcatttgtcaatgagttgttaataaagaactaagtgaagtattaatatttattaatcgttgttgtttatgtcgttacgagatgat 13037093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 123 - 215
Target Start/End: Complemental strand, 16296354 - 16296262
Alignment:
Q  123 ttaagttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttgtttaagttattatgagatgat 215  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||| |||||||||| ||  ||||||||||||    
T  16296354 ttaagttgtcatttgtcactgagttgttaataaagaactaagtgaagtattaatatttattaatcgttgttgtttatgtcgttatgagatgat 16296262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 123 - 215
Target Start/End: Complemental strand, 51992376 - 51992284
Alignment:
Q  123 ttaagttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttgtttaagttattatgagatgat 215  Q
    |||||||||||||| ||||||||||||||||||||||||| ||||| |||||||||||||||||| |||||||||| ||| ||||||||||||    
T  51992376 ttaagttgtcatttatcaatgagttgttaataaagaactatgtgaagtattaatatttattaatcgttgttgtttatgttgttatgagatgat 51992284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 124 - 215
Target Start/End: Original strand, 19435960 - 19436051
Alignment:
Q  124 taagttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttgtttaagttattatgagatgat 215  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| |||||||||| ||  ||||||||||||    
T  19435960 taagttgtcatttgtcaatgagttgttaataaagaactaagtgaagtattaatacttattaatcgttgttgtttatgtcgttatgagatgat 19436051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 128 - 198
Target Start/End: Original strand, 44773577 - 44773647
Alignment:
Q  128 ttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttgttta 198  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  44773577 ttgtcatttgtcaatgagttgttaataaagaactaagtgaagtattaatatttattaatcattgttgttta 44773647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 126 - 198
Target Start/End: Original strand, 15355785 - 15355857
Alignment:
Q  126 agttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttgttta 198  Q
    ||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||    
T  15355785 agttgtcatttgtcaatgagttgttaataaagaactaagtgaagtagtaatatttattaatcattgttgttta 15355857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 126 - 198
Target Start/End: Complemental strand, 46642449 - 46642377
Alignment:
Q  126 agttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttgttta 198  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||    
T  46642449 agttgtcatttgtcaatgagttgttaataaagaactaagtgaagtattaatatttattaatcgttgttgttta 46642377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 126 - 190
Target Start/End: Original strand, 7641645 - 7641709
Alignment:
Q  126 agttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcatt 190  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  7641645 agttgtcatttgtcaatgagttgttaataaagaactaagtgaagtattaatatttattaatcatt 7641709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 126 - 198
Target Start/End: Complemental strand, 13844155 - 13844083
Alignment:
Q  126 agttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttgttta 198  Q
    |||||||||||||||||||||| |||||||||||||||||||| | |||||||||||||||||||||||||||    
T  13844155 agttgtcatttgtcaatgagttattaataaagaactaagtgaagtgttaatatttattaatcattgttgttta 13844083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 123 - 207
Target Start/End: Original strand, 10357716 - 10357800
Alignment:
Q  123 ttaagttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttgtttaagttattat 207  Q
    ||||||||| |||| |||||||||||||||| |||||||| ||||| |||||||||||||||||| |||||||||| ||||||||    
T  10357716 ttaagttgtaatttatcaatgagttgttaatgaagaactatgtgaagtattaatatttattaatcgttgttgtttatgttattat 10357800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 126 - 194
Target Start/End: Complemental strand, 15189905 - 15189837
Alignment:
Q  126 agttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttg 194  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||| ||||||    
T  15189905 agttgtcatttgtcaatgagttgttaataaagaactaagtgaagtattaatatttaataatcgttgttg 15189837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 123 - 207
Target Start/End: Complemental strand, 40229337 - 40229253
Alignment:
Q  123 ttaagttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttgtttaagttattat 207  Q
    |||||||||||||| |||||||||||||||| |||||||| ||||| |||||||||||||||||| |||||||||| ||| ||||    
T  40229337 ttaagttgtcatttatcaatgagttgttaatgaagaactatgtgaagtattaatatttattaatcgttgttgtttatgttgttat 40229253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 141 - 215
Target Start/End: Original strand, 4859030 - 4859104
Alignment:
Q  141 atgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttgtttaagttattatgagatgat 215  Q
    ||||||||||||||||||| |||||||| |||||||||||||||||| |||||||||| |||||||||| |||||    
T  4859030 atgagttgttaataaagaattaagtgaagtattaatatttattaatcgttgttgtttatgttattatgaaatgat 4859104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 5 - 113
Target Start/End: Original strand, 13591966 - 13592073
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaatttattcatgtttttca 104  Q
    ||||||||| ||| || |||||||||||||||||||||||| |||| || |||||||||||||||| ||| |||||||||||| ||  | ||| ||||||    
T  13591966 agatgtttatgtgctgcctatgttgctgttgttggttatgtgaaatatttatatgccttatgtgga-aatgtatgatgtttaagttgatgatgcttttca 13592064  T
Q  105 ttaatattg 113  Q
    |||||||||    
T  13592065 ttaatattg 13592073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 8 - 81
Target Start/End: Original strand, 52873185 - 52873255
Alignment:
Q  8 tgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgat 81  Q
    ||||||||||||| |||||||||||||||||||||||| |||||||||||||||||   |||||||||||||||    
T  52873185 tgtttaagtgttggctatgttgctgttgttggttatgtgaaatgttcatatgcctt---tggagaatatatgat 52873255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 8 - 114
Target Start/End: Original strand, 15497078 - 15497184
Alignment:
Q  8 tgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaatttattcatgtttttcatta 107  Q
    |||||||||| || |||||||| ||||||||||||||| ||||  | ||||| |||||||||| ||| |||||||||||| || || ||| |||||||||    
T  15497078 tgtttaagtgctgcctatgttgatgttgttggttatgtgaaataattatatgtcttatgtggaaaatgtatgatgtttaagttgttgatgcttttcatta 15497177  T
Q  108 atattgt 114  Q
    |||||||    
T  15497178 atattgt 15497184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 114
Target Start/End: Original strand, 14746623 - 14746732
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaatttattcatgtttttca 104  Q
    ||||||||| ||| |  |||||||||||||||||||||||| |||| || |||||| ||||||||| ||| |||||||||||| || || ||| | ||||    
T  14746623 agatgtttacgtgctacctatgttgctgttgttggttatgtgaaatatttatatgcgttatgtggaaaatgtatgatgtttaagttgttgatgctcttca 14746722  T
Q  105 ttaatattgt 114  Q
    ||||||||||    
T  14746723 ttaatattgt 14746732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 123 - 207
Target Start/End: Complemental strand, 19734191 - 19734107
Alignment:
Q  123 ttaagttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttgtttaagttattat 207  Q
    |||||||||||||| ||||||| |||||||  |||||||| ||||| |||||||||||||||||| |||||||||| ||| ||||    
T  19734191 ttaagttgtcatttatcaatgaattgttaacgaagaactatgtgaagtattaatatttattaatcgttgttgtttatgttgttat 19734107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 22 - 113
Target Start/End: Original strand, 43256215 - 43256306
Alignment:
Q  22 ctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaatttattcatgtttttcattaatattg 113  Q
    |||||||||||||||||||||||| |||| || |||||||||||||||| ||| |||||||||||| || || ||| ||  |||||||||||    
T  43256215 ctatgttgctgttgttggttatgtgaaatatttatatgccttatgtggaaaatgtatgatgtttaagttgttgatgcttcacattaatattg 43256306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 189 - 234
Target Start/End: Complemental strand, 361707 - 361662
Alignment:
Q  189 ttgttgtttaagttattatgagatgataaatatgtgttgttatatt 234  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  361707 ttgttgtttaagttattatgagatgataaatatgtgttgttatatt 361662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 189 - 234
Target Start/End: Complemental strand, 6190168 - 6190123
Alignment:
Q  189 ttgttgtttaagttattatgagatgataaatatgtgttgttatatt 234  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  6190168 ttgttgtttaagttattatgagatgataaatatgtgttgttatatt 6190123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 5 - 114
Target Start/End: Complemental strand, 9556515 - 9556406
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaatttattcatgtttttca 104  Q
    ||||||||| |||| | |||||||||||||||||||||||| |||| || ||||||||||||||||  || | |||||||||| || || ||| ||  ||    
T  9556515 agatgtttatgtgtcgcctatgttgctgttgttggttatgtgaaatatttatatgccttatgtggaagatgtttgatgtttaagttgttgatgcttcaca 9556416  T
Q  105 ttaatattgt 114  Q
    ||||||||||    
T  9556415 ttaatattgt 9556406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 5 - 114
Target Start/End: Original strand, 17048174 - 17048283
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaatttattcatgtttttca 104  Q
    ||||||||| ||| || |||||||| ||||||||||||||| |||| || ||||||||||||||||  || |||||||||||| || || ||| ||  ||    
T  17048174 agatgtttacgtgctgcctatgttgttgttgttggttatgtgaaatatttatatgccttatgtggaagatgtatgatgtttaagttgttgatgcttcaca 17048273  T
Q  105 ttaatattgt 114  Q
    ||||||||||    
T  17048274 ttaatattgt 17048283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 31 - 114
Target Start/End: Original strand, 10694955 - 10695038
Alignment:
Q  31 tgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaatttattcatgtttttcattaatattgt 114  Q
    ||||||||||||||||||||  | |||| ||||||||||| ||| |||||||||||| || || || |||||||||||||||||    
T  10694955 tgttgttggttatgtaaaataattatattccttatgtggaaaatgtatgatgtttaagttgttgatatttttcattaatattgt 10695038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 31 - 114
Target Start/End: Original strand, 10908721 - 10908804
Alignment:
Q  31 tgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaatttattcatgtttttcattaatattgt 114  Q
    ||||||||||||||||||||  | |||| ||||||||||| ||| |||||||||||| || || || |||||||||||||||||    
T  10908721 tgttgttggttatgtaaaataattatattccttatgtggaaaatgtatgatgtttaagttgttgatatttttcattaatattgt 10908804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 123 - 198
Target Start/End: Complemental strand, 14629588 - 14629514
Alignment:
Q  123 ttaagttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttgttta 198  Q
    |||||||||||||| |||||||||||||||| |||||||| ||||| |||||||| ||||||||  ||||||||||    
T  14629588 ttaagttgtcatttatcaatgagttgttaatgaagaactatgtgaagtattaata-ttattaattgttgttgttta 14629514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 87
Target Start/End: Original strand, 4561455 - 4561537
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaa 87  Q
    ||||||||| |||| | |||||||||||||||||||||||| |||| || ||||||||||||||||  || | ||||||||||    
T  4561455 agatgtttatgtgtcgcctatgttgctgttgttggttatgtgaaatatttatatgccttatgtggaagatgtttgatgtttaa 4561537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 87
Target Start/End: Original strand, 5757059 - 5757141
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaa 87  Q
    ||||||||| |||| | |||||||||||||||||||||||| |||| || ||||||||||||||||  || | ||||||||||    
T  5757059 agatgtttatgtgtcgcctatgttgctgttgttggttatgtgaaatatttatatgccttatgtggaagatgtttgatgtttaa 5757141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 87
Target Start/End: Complemental strand, 10712841 - 10712759
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaa 87  Q
    ||||||||| |||| | |||||||||||||||||||||||| |||| || ||||| ||||||||||  || ||||||||||||    
T  10712841 agatgtttacgtgtcgcctatgttgctgttgttggttatgtgaaatatttatatgacttatgtggaagatgtatgatgtttaa 10712759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 87
Target Start/End: Complemental strand, 10926611 - 10926529
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaa 87  Q
    ||||||||| |||| | |||||||||||||||||||||||| |||| || ||||| ||||||||||  || ||||||||||||    
T  10926611 agatgtttacgtgtcgcctatgttgctgttgttggttatgtgaaatatttatatgacttatgtggaagatgtatgatgtttaa 10926529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 87
Target Start/End: Complemental strand, 27534011 - 27533929
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaa 87  Q
    ||||||||| |||| | |||||||||||||||||||||||| ||||  | ||||||||||||||||  || ||||||||||||    
T  27534011 agatgtttacgtgtcgcctatgttgctgttgttggttatgtgaaatacttatatgccttatgtggaagatgtatgatgtttaa 27533929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 5 - 70
Target Start/End: Complemental strand, 10056719 - 10056654
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtgga 70  Q
    ||||||||| ||| || |||||||||||||||||||||||| |||| || ||||||||||||||||    
T  10056719 agatgtttacgtgctgcctatgttgctgttgttggttatgtgaaatatttatatgccttatgtgga 10056654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 5 - 114
Target Start/End: Original strand, 14757543 - 14757652
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaatttattcatgtttttca 104  Q
    ||||||||| |||| | |||||||| ||||||||||||||| |||| || ||||||||||||||||  || | |||||||||| || || ||| ||  ||    
T  14757543 agatgtttatgtgtcgcctatgttgttgttgttggttatgtgaaatatttatatgccttatgtggaagatgtttgatgtttaagttgttgatgcttcaca 14757642  T
Q  105 ttaatattgt 114  Q
    ||||||||||    
T  14757643 ttaatattgt 14757652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 31 - 114
Target Start/End: Original strand, 15884123 - 15884206
Alignment:
Q  31 tgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaatttattcatgtttttcattaatattgt 114  Q
    ||||||||||||||| ||||  | |||||||||||||| | ||| |||||||||||| || || ||| ||||||||||||||||    
T  15884123 tgttgttggttatgtgaaataattatatgccttatgtgaaaaatgtatgatgtttaagttgttgatgattttcattaatattgt 15884206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 87
Target Start/End: Complemental strand, 12487696 - 12487614
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaa 87  Q
    ||||||||| |||| | |||||||||||||||||||||||| |||| || ||||| |||||||| |  || ||||||||||||    
T  12487696 agatgtttacgtgtcgcctatgttgctgttgttggttatgtgaaatatttatatgacttatgtgaaagatgtatgatgtttaa 12487614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 87
Target Start/End: Original strand, 14954288 - 14954370
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaa 87  Q
    ||||||||| |||| | |||||||| ||||||||||||||| |||| || ||||| ||||||||||  || ||||||||||||    
T  14954288 agatgtttacgtgtcgcctatgttgttgttgttggttatgtgaaatatttatatgacttatgtggaagatgtatgatgtttaa 14954370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 155 - 216
Target Start/End: Complemental strand, 33185736 - 33185675
Alignment:
Q  155 aagaactaagtgaaatattaatatttattaatcattgttgtttaagttattatgagatgata 216  Q
    |||||||| || || ||||||||||||||||||||||||||||| ||||||||  |||||||    
T  33185736 aagaactatgttaagtattaatatttattaatcattgttgtttatgttattatatgatgata 33185675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 123 - 176
Target Start/End: Original strand, 44024664 - 44024717
Alignment:
Q  123 ttaagttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaat 176  Q
    |||||||||||||| |||||||||||||||| |||||||| ||||| |||||||    
T  44024664 ttaagttgtcatttatcaatgagttgttaatgaagaactatgtgaagtattaat 44024717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 127 - 179
Target Start/End: Original strand, 26922928 - 26922980
Alignment:
Q  127 gttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatt 179  Q
    ||||||| || |||||||||||||||| |||||||| ||||||||||||||||    
T  26922928 gttgtcaattatcaatgagttgttaatgaagaactatgtgaaatattaatatt 26922980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 195 - 234
Target Start/End: Complemental strand, 361636 - 361597
Alignment:
Q  195 tttaagttattatgagatgataaatatgtgttgttatatt 234  Q
    ||||||||||||||||||||| ||||||||||||||||||    
T  361636 tttaagttattatgagatgatgaatatgtgttgttatatt 361597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 31 - 113
Target Start/End: Complemental strand, 15008309 - 15008227
Alignment:
Q  31 tgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaatttattcatgtttttcattaatattg 113  Q
    ||||||||||||||| ||||  | ||||  |||||||||| ||| |||||||||||| || || ||| |||||||||||||||    
T  15008309 tgttgttggttatgtgaaataattatatatcttatgtggaaaatgtatgatgtttaagttgttgatgcttttcattaatattg 15008227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 5 - 87
Target Start/End: Complemental strand, 25689855 - 25689773
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaa 87  Q
    ||||||||| |||| | |||||||| ||||||||||||||| |||| || ||||  ||||||||||  || ||||||||||||    
T  25689855 agatgtttacgtgtcgcctatgttgttgttgttggttatgtgaaatatttatataacttatgtggaagatgtatgatgtttaa 25689773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 114
Target Start/End: Complemental strand, 17810257 - 17810148
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaatttattcatgtttttca 104  Q
    ||||||| | |||| | |||||||| |||||||| |||||| |||| || ||||||||||||||||  || | |||||||||| || || ||| ||  ||    
T  17810257 agatgttcatgtgtcgcctatgttgttgttgttgattatgtgaaatatttatatgccttatgtggaagatgtttgatgtttaagttgttgatgcttcaca 17810158  T
Q  105 ttaatattgt 114  Q
    ||||||||||    
T  17810157 ttaatattgt 17810148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 33 - 112
Target Start/End: Complemental strand, 40619872 - 40619793
Alignment:
Q  33 ttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaatttattcatgtttttcattaatatt 112  Q
    ||||||||||||| ||||  | |||||||||||||||| ||| || ||||||||  || || ||| ||||||||||||||    
T  40619872 ttgttggttatgtgaaataattatatgccttatgtggaaaatgtaagatgtttaggttgttgatgcttttcattaatatt 40619793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 114
Target Start/End: Complemental strand, 33742363 - 33742256
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaatttattcatgtttttca 104  Q
    ||||||||| ||||   |||||||||||||||||||||||| |||| ||  |||| ||||||||||  || | |||||||||| || || ||| ||  ||    
T  33742363 agatgtttatgtgtctcctatgttgctgttgttggttatgtgaaatatt--tatgtcttatgtggaagatgtttgatgtttaagttgttgatgcttcaca 33742266  T
Q  105 ttaatattgt 114  Q
    ||||||||||    
T  33742265 ttaatattgt 33742256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 201 - 234
Target Start/End: Original strand, 15481958 - 15481991
Alignment:
Q  201 ttattatgagatgataaatatgtgttgttatatt 234  Q
    ||||||| ||||||||||||||||||||||||||    
T  15481958 ttattataagatgataaatatgtgttgttatatt 15481991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 87
Target Start/End: Complemental strand, 28385587 - 28385531
Alignment:
Q  31 tgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaa 87  Q
    ||||||||||||||| ||||    |||||||||||||||| ||| ||||||||||||    
T  28385587 tgttgttggttatgtgaaataactatatgccttatgtggaaaatgtatgatgtttaa 28385531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 82; Significance: 8e-39; HSPs: 2)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 123 - 220
Target Start/End: Complemental strand, 106149 - 106052
Alignment:
Q  123 ttaagttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttgtttaagttattatgagatgataaata 220  Q
    ||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||  ||||||||||||||||||||||||||||||||    
T  106149 ttaagttttcatttgtcaatgagttgttaataaagaactaagtgaagtattaatatttattaattgttgttgtttaagttattatgagatgataaata 106052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 196 - 234
Target Start/End: Complemental strand, 106043 - 106005
Alignment:
Q  196 ttaagttattatgagatgataaatatgtgttgttatatt 234  Q
    |||||||||||||||||||| ||||||||||| ||||||    
T  106043 ttaagttattatgagatgatgaatatgtgttgctatatt 106005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1815 (Bit Score: 77; Significance: 7e-36; HSPs: 1)
Name: scaffold1815
Description:

Target: scaffold1815; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 123 - 215
Target Start/End: Complemental strand, 883 - 791
Alignment:
Q  123 ttaagttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttgtttaagttattatgagatgat 215  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||  ||||||||||||    
T  883 ttaagttgtcatttgtcaatgagttgttaataaagaactaagtgaagtattaatatttattaatcattgttgtttatgtcgttatgagatgat 791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 77; Significance: 7e-36; HSPs: 81)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 123 - 215
Target Start/End: Original strand, 14642747 - 14642839
Alignment:
Q  123 ttaagttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttgtttaagttattatgagatgat 215  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||| ||| ||||||||||||    
T  14642747 ttaagttgtcatttgtcaatgagttgttaataaagaactaagtgaagtattaatatttattaatcgttgttgtttatgttgttatgagatgat 14642839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 123 - 215
Target Start/End: Complemental strand, 6158252 - 6158160
Alignment:
Q  123 ttaagttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttgtttaagttattatgagatgat 215  Q
    |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||| | |||||||| ||||||||||||||||    
T  6158252 ttaagttgtcatttgtcaatgagttgttaataaagaactaagtgatgtattaatatttattaatcgtggttgtttatgttattatgagatgat 6158160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 123 - 215
Target Start/End: Complemental strand, 37037710 - 37037618
Alignment:
Q  123 ttaagttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttgtttaagttattatgagatgat 215  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||| ||  ||||||||||||    
T  37037710 ttaagttgtcatttgtcaatgagttgttaataaagaactaagtgaagtattaatatttattaatcgttgttgtttatgtcgttatgagatgat 37037618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 126 - 198
Target Start/End: Original strand, 6469618 - 6469690
Alignment:
Q  126 agttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttgttta 198  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  6469618 agttgtcatttgtcaatgagttgttaataaagaactaagtgaagtattaatatttattaatcattgttgttta 6469690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 123 - 215
Target Start/End: Original strand, 14153624 - 14153716
Alignment:
Q  123 ttaagttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttgtttaagttattatgagatgat 215  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||  ||||||||| ||| ||||||||||||    
T  14153624 ttaagttgtcatttgtcactgagttgttaataaagaactaagtgaagtattaatatttattaatcggtgttgtttatgttgttatgagatgat 14153716  T

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Target: chr3; HSP #6
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 123 - 215
Target Start/End: Complemental strand, 17043913 - 17043821
Alignment:
Q  123 ttaagttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttgtttaagttattatgagatgat 215  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||  |||||||||| ||| |||| |||||||    
T  17043913 ttaagttgtcatttgtcaatgagttgttaataaagaactaagtgaagtattaatatttattaattgttgttgtttatgttgttatcagatgat 17043821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 123 - 215
Target Start/End: Original strand, 50349257 - 50349349
Alignment:
Q  123 ttaagttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttgtttaagttattatgagatgat 215  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| |||||||||| ||  ||||||||||||    
T  50349257 ttaagttgtcatttgtcaatgagttgttaataaagaactaagtgaagtattaatacttattaatcgttgttgtttatgtcgttatgagatgat 50349349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 126 - 198
Target Start/End: Original strand, 15076424 - 15076496
Alignment:
Q  126 agttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttgttta 198  Q
    |||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||    
T  15076424 agttgtcatttgtcaatgagttattaataaagaactaagtgaagtattaatatttattaatcattgttgttta 15076496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 126 - 198
Target Start/End: Complemental strand, 15977178 - 15977106
Alignment:
Q  126 agttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttgttta 198  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||    
T  15977178 agttgtcatttgtcaatgagttgttaataaagaactaagtgaagtatttatatttattaatcattgttgttta 15977106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 126 - 194
Target Start/End: Original strand, 18440416 - 18440484
Alignment:
Q  126 agttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttg 194  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  18440416 agttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcgttgttg 18440484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 126 - 194
Target Start/End: Original strand, 19485490 - 19485558
Alignment:
Q  126 agttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttg 194  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  19485490 agttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcgttgttg 19485558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 126 - 198
Target Start/End: Original strand, 28849098 - 28849170
Alignment:
Q  126 agttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttgttta 198  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||    
T  28849098 agttgtcatttgtcaatgagttgttaataaagaactaagtgaagtatttatatttattaatcattgttgttta 28849170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 126 - 198
Target Start/End: Original strand, 45578310 - 45578382
Alignment:
Q  126 agttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttgttta 198  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||    
T  45578310 agttgtcatttgtcaatgagttgttaataaagaactaagtgaagtattaatatttattaatcattcttgttta 45578382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 5 - 114
Target Start/End: Complemental strand, 324315 - 324206
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaatttattcatgtttttca 104  Q
    ||||||||| ||| || |||||||||||||||||||||||| |||| || |||||||||||||||| ||| |||||||||||| || || ||| ||||||    
T  324315 agatgtttacgtgctgcctatgttgctgttgttggttatgtgaaatatttatatgccttatgtggaaaatgtatgatgtttaagttgttgatgcttttca 324216  T
Q  105 ttaatattgt 114  Q
    ||||||||||    
T  324215 ttaatattgt 324206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 123 - 207
Target Start/End: Complemental strand, 9644311 - 9644227
Alignment:
Q  123 ttaagttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttgtttaagttattat 207  Q
    |||||||||||||| |||||||||||||||| |||||||| ||||| ||||||||||||||||||||||||||||| ||| ||||    
T  9644311 ttaagttgtcatttatcaatgagttgttaatgaagaactatgtgaagtattaatatttattaatcattgttgtttatgttgttat 9644227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 126 - 198
Target Start/End: Complemental strand, 12269136 - 12269064
Alignment:
Q  126 agttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttgttta 198  Q
    |||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||| ||||||||||    
T  12269136 agttgtcatttgtcaatgagttgttaataatgaactaagtgaagtattaatatttattaatcgttgttgttta 12269064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 110 - 204
Target Start/End: Original strand, 19569505 - 19569599
Alignment:
Q  110 attgtcattatatttaagttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttgtttaagttat 204  Q
    |||||| || || |||||||||||||| |||||||||||||||  |||||||| |||||||||||||||||||||||| |||||||||| |||||    
T  19569505 attgtcgttgtagttaagttgtcatttatcaatgagttgttaaagaagaactatgtgaaatattaatatttattaatcgttgttgtttatgttat 19569599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 126 - 196
Target Start/End: Original strand, 49390237 - 49390307
Alignment:
Q  126 agttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttgtt 196  Q
    |||||||||||||||||||||| ||||| |||||||||||||| |||||||||||||||||||||||||||    
T  49390237 agttgtcatttgtcaatgagttattaatgaagaactaagtgaagtattaatatttattaatcattgttgtt 49390307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 5 - 114
Target Start/End: Complemental strand, 14966249 - 14966140
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaatttattcatgtttttca 104  Q
    ||||||||| ||| || |||||||| ||||||||||||||| |||| || |||||||||||||||| |||||||||||||||| || || ||| | ||||    
T  14966249 agatgtttacgtgctgcctatgttgatgttgttggttatgtgaaatatttatatgccttatgtggaaaatatatgatgtttaagttgttgatgctcttca 14966150  T
Q  105 ttaatattgt 114  Q
    ||||||||||    
T  14966149 ttaatattgt 14966140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 5 - 114
Target Start/End: Original strand, 52989762 - 52989871
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaatttattcatgtttttca 104  Q
    ||||||||| ||| || |||||||||||||||||||||||| |||| || |||||||||||||||| ||| |||||||||||| || || ||| | ||||    
T  52989762 agatgtttacgtgctgcctatgttgctgttgttggttatgtgaaatatttatatgccttatgtggaaaatgtatgatgtttaagttgttgatgctcttca 52989861  T
Q  105 ttaatattgt 114  Q
    ||||||||||    
T  52989862 ttaatattgt 52989871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 123 - 207
Target Start/End: Original strand, 12506874 - 12506958
Alignment:
Q  123 ttaagttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttgtttaagttattat 207  Q
    ||||||||||||||||||||||||| ||||| |||||||| ||||| |||||||||||||||||| |||||||||| ||| ||||    
T  12506874 ttaagttgtcatttgtcaatgagttattaatgaagaactatgtgaagtattaatatttattaatcgttgttgtttatgttgttat 12506958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 123 - 207
Target Start/End: Original strand, 12513017 - 12513101
Alignment:
Q  123 ttaagttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttgtttaagttattat 207  Q
    |||||| |||||||||||||||||| |||||||||||||| ||||| |||||||||||||||||| |||||||||| ||| ||||    
T  12513017 ttaagtagtcatttgtcaatgagttattaataaagaactatgtgaagtattaatatttattaatcgttgttgtttatgttgttat 12513101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 123 - 207
Target Start/End: Original strand, 53647073 - 53647157
Alignment:
Q  123 ttaagttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttgtttaagttattat 207  Q
    |||||||||||||| |||||||||||||||  |||||||| ||||| |||||||||||||||||| |||||||||| ||||||||    
T  53647073 ttaagttgtcatttatcaatgagttgttaaggaagaactatgtgaagtattaatatttattaatcgttgttgtttatgttattat 53647157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 126 - 195
Target Start/End: Complemental strand, 21618142 - 21618072
Alignment:
Q  126 agttgtcatttgtcaatg-agttgttaataaagaactaagtgaaatattaatatttattaatcattgttgt 195  Q
    ||||||||||| |||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  21618142 agttgtcatttatcaatggagttgttaataaagaactaagtgaagtattaatatttattaatcattgttgt 21618072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 5 - 114
Target Start/End: Original strand, 43889666 - 43889775
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaatttattcatgtttttca 104  Q
    ||||||||| ||| || |||||||||||||||||||||||| |||| || ||||||||||||| || ||| |||||||||||| || || |||| | |||    
T  43889666 agatgtttacgtgctgcctatgttgctgttgttggttatgtgaaatatttatatgccttatgtagaaaatgtatgatgtttaagttgttgatgtctctca 43889765  T
Q  105 ttaatattgt 114  Q
    ||||||||||    
T  43889766 ttaatattgt 43889775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 123 - 207
Target Start/End: Original strand, 41173554 - 41173638
Alignment:
Q  123 ttaagttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttgtttaagttattat 207  Q
    ||||||||||||||||||| ||||| ||||| |||||||| ||||| |||||||||||||||||| |||||||||| ||| ||||    
T  41173554 ttaagttgtcatttgtcaacgagttattaatgaagaactatgtgaagtattaatatttattaatcgttgttgtttatgttgttat 41173638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 4 - 114
Target Start/End: Complemental strand, 16643253 - 16643143
Alignment:
Q  4 aagatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaatttattcatgtttttc 103  Q
    |||||||||| ||| |||||| |||| ||||||||||||||| |||| || |||||||||||||||| ||| |||||||||||| || ||  || |||||    
T  16643253 aagatgtttatgtgatgtctaagttgttgttgttggttatgtgaaatatttatatgccttatgtggaaaatgtatgatgtttaagttgttggtgcttttc 16643154  T
Q  104 attaatattgt 114  Q
    | |||||||||    
T  16643153 agtaatattgt 16643143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 5 - 87
Target Start/End: Original strand, 17691748 - 17691830
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaa 87  Q
    ||||||||| ||| || |||||||||||||||||||||||| |||| || |||||||||||||||| ||| ||||||||||||    
T  17691748 agatgtttacgtgctgcctatgttgctgttgttggttatgtgaaatatttatatgccttatgtggaaaatgtatgatgtttaa 17691830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 126 - 195
Target Start/End: Complemental strand, 36166248 - 36166178
Alignment:
Q  126 agttgtcatttgtcaatg-agttgttaataaagaactaagtgaaatattaatatttattaatcattgttgt 195  Q
    ||||||||||| |||| | ||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  36166248 agttgtcatttatcaaaggagttgttaataaagaactaagtgaagtattaatatttattaatcattgttgt 36166178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 123 - 193
Target Start/End: Original strand, 45531818 - 45531888
Alignment:
Q  123 ttaagttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgtt 193  Q
    |||||||||||||| |||||||||||||||| |||||||| ||||| |||||||||||||||||| |||||    
T  45531818 ttaagttgtcatttatcaatgagttgttaatgaagaactatgtgaagtattaatatttattaatcgttgtt 45531888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 114
Target Start/End: Original strand, 4107518 - 4107627
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaatttattcatgtttttca 104  Q
    ||||||||| |||| | |||||||||||||||||||||||| |||| || ||||||||||||||||  || | |||||||||| || || ||||||  ||    
T  4107518 agatgtttatgtgtcgcctatgttgctgttgttggttatgtgaaatatttatatgccttatgtggaagatgtttgatgtttaagttgttgatgtttcaca 4107617  T
Q  105 ttaatattgt 114  Q
    ||||||||||    
T  4107618 ttaatattgt 4107627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 114
Target Start/End: Complemental strand, 12339786 - 12339677
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaatttattcatgtttttca 104  Q
    ||||||||| |||| | |||||||||||||||||||||||| |||| || ||||||||||||||||  || |||||||||||| || || ||| ||  ||    
T  12339786 agatgtttacgtgtcgcctatgttgctgttgttggttatgtgaaatatttatatgccttatgtggaagatgtatgatgtttaagttgttgatgcttcaca 12339687  T
Q  105 ttaatattgt 114  Q
    ||||||||||    
T  12339686 ttaatattgt 12339677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 114
Target Start/End: Complemental strand, 12469981 - 12469872
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaatttattcatgtttttca 104  Q
    ||||||| | ||| || |||||||||||||||||||||||| |||| || |||||||||||||||| ||| | |||||||||| || || ||| || |||    
T  12469981 agatgttcacgtgctgcctatgttgctgttgttggttatgtgaaatatttatatgccttatgtggaaaatgtgtgatgtttaagttgttgatgcttctca 12469882  T
Q  105 ttaatattgt 114  Q
    ||||||||||    
T  12469881 ttaatattgt 12469872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 114
Target Start/End: Original strand, 18700347 - 18700456
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaatttattcatgtttttca 104  Q
    ||||||||| ||| || |||||||| ||||||||||||||| ||||  | |||||||||||||||  ||| |||||||||||| || || |||||| |||    
T  18700347 agatgtttacgtgctgcctatgttgttgttgttggttatgtgaaataattatatgccttatgtgggaaatgtatgatgtttaagtttttgatgtttctca 18700446  T
Q  105 ttaatattgt 114  Q
    ||||||||||    
T  18700447 ttaatattgt 18700456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 123 - 207
Target Start/End: Original strand, 16180183 - 16180266
Alignment:
Q  123 ttaagttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttgtttaagttattat 207  Q
    |||||||||||||| |||||||| ||||||| |||||||| |||||||||||||| ||||||||| |||||||||| ||| ||||    
T  16180183 ttaagttgtcatttatcaatgagatgttaatgaagaactatgtgaaatattaata-ttattaatcgttgttgtttatgttgttat 16180266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 123 - 207
Target Start/End: Original strand, 22307837 - 22307921
Alignment:
Q  123 ttaagttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttgtttaagttattat 207  Q
    ||||||||| |||| |||||||||||||||| |||||||| ||||| |||||||||||||||||| || ||||||| ||| ||||    
T  22307837 ttaagttgtaatttatcaatgagttgttaatgaagaactatgtgaagtattaatatttattaatcgttattgtttatgttgttat 22307921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 123 - 207
Target Start/End: Original strand, 42327516 - 42327600
Alignment:
Q  123 ttaagttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttgtttaagttattat 207  Q
    ||||| |||||||| | |||||||||||||| |||||||| ||||| |||||||||||||||||| |||||||||| ||| ||||    
T  42327516 ttaagctgtcatttattaatgagttgttaatgaagaactatgtgaagtattaatatttattaatcgttgttgtttatgttgttat 42327600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 7 - 114
Target Start/End: Complemental strand, 16796564 - 16796457
Alignment:
Q  7 atgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaatttattcatgtttttcatt 106  Q
    ||||||| ||| || |||||||||||||||||||||||| |||| || ||||||||||||||||  || |||||||||||| || || ||| ||  ||||    
T  16796564 atgtttacgtgctgcctatgttgctgttgttggttatgtgaaatatttatatgccttatgtggaagatgtatgatgtttaagttgttgatgcttcacatt 16796465  T
Q  107 aatattgt 114  Q
    ||||||||    
T  16796464 aatattgt 16796457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 5 - 87
Target Start/End: Original strand, 11300551 - 11300633
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaa 87  Q
    ||||||||| |||| | |||||||||||||||||||||||| |||| || ||||||||||||||||  || ||||||||||||    
T  11300551 agatgtttacgtgtcgcctatgttgctgttgttggttatgtgaaatatttatatgccttatgtggaagatgtatgatgtttaa 11300633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 5 - 87
Target Start/End: Complemental strand, 14671003 - 14670921
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaa 87  Q
    ||||||||| ||| || |||||||||||||||||||||||| |||| || |||||||||||||||| ||| || |||||||||    
T  14671003 agatgtttatgtgctgcctatgttgctgttgttggttatgtgaaatatttatatgccttatgtggaaaatgtacgatgtttaa 14670921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 5 - 114
Target Start/End: Original strand, 4111370 - 4111479
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaatttattcatgtttttca 104  Q
    ||||||||| |||| | |||||||||||||||||||||||| |||| || ||||||||||||||||  || | |||||||||| || || ||| ||  ||    
T  4111370 agatgtttatgtgtcgcctatgttgctgttgttggttatgtgaaatatttatatgccttatgtggaagatgtttgatgtttaagttgttgatgcttcaca 4111469  T
Q  105 ttaatattgt 114  Q
    ||||||||||    
T  4111470 ttaatattgt 4111479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 5 - 114
Target Start/End: Complemental strand, 5223384 - 5223275
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaatttattcatgtttttca 104  Q
    ||||||||| |||| | ||||||||||| |||||||||||| |||| || ||||||||||||||||  || |||||||||||| || || ||| ||  ||    
T  5223384 agatgtttacgtgtcgcctatgttgctgctgttggttatgtgaaatatttatatgccttatgtggaagatgtatgatgtttaagttgttgatgcttcaca 5223285  T
Q  105 ttaatattgt 114  Q
    ||||||||||    
T  5223284 ttaatattgt 5223275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 5 - 114
Target Start/End: Complemental strand, 7109686 - 7109577
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaatttattcatgtttttca 104  Q
    ||||||||| |||| | |||||||||||||||||||||||| |||| || ||||||||||||||||  || | |||||||||| || || ||| ||  ||    
T  7109686 agatgtttatgtgtcgcctatgttgctgttgttggttatgtgaaatatttatatgccttatgtggaagatgtttgatgtttaagttgttgatgcttcaca 7109587  T
Q  105 ttaatattgt 114  Q
    ||||||||||    
T  7109586 ttaatattgt 7109577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 5 - 114
Target Start/End: Complemental strand, 7113621 - 7113512
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaatttattcatgtttttca 104  Q
    ||||||||| |||| | |||||||||||||||||||||||| |||| || ||||||||||||||||  || | |||||||||| || || ||| ||  ||    
T  7113621 agatgtttatgtgtcgcctatgttgctgttgttggttatgtgaaatatttatatgccttatgtggaagatgtttgatgtttaagttgttgatgcttcaca 7113522  T
Q  105 ttaatattgt 114  Q
    ||||||||||    
T  7113521 ttaatattgt 7113512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 5 - 114
Target Start/End: Original strand, 11165650 - 11165759
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaatttattcatgtttttca 104  Q
    ||||||||| |||| | |||||||||||||||||||||||| |||| || ||||||||||||||||  || | |||||||||| || || ||| ||  ||    
T  11165650 agatgtttatgtgtcgcctatgttgctgttgttggttatgtgaaatatttatatgccttatgtggaagatgtttgatgtttaagttgttgatgcttcaca 11165749  T
Q  105 ttaatattgt 114  Q
    ||||||||||    
T  11165750 ttaatattgt 11165759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 123 - 215
Target Start/End: Complemental strand, 15017511 - 15017425
Alignment:
Q  123 ttaagttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttgtttaagttattatgagatgat 215  Q
    |||||||||||||| ||||||||||||||||||||||||| ||||      |||||||||||||| |||||||||| ||| |||| |||||||    
T  15017511 ttaagttgtcatttatcaatgagttgttaataaagaactatgtga------aatatttattaatcgttgttgtttatgttgttataagatgat 15017425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 5 - 86
Target Start/End: Complemental strand, 15465155 - 15465074
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgttta 86  Q
    ||||||||| |||| | |||||||| ||||||||||||||| |||| || |||||||||||||||| ||| |||||||||||    
T  15465155 agatgtttacgtgtcgcctatgttgttgttgttggttatgtgaaatatttatatgccttatgtggaaaatgtatgatgttta 15465074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 5 - 114
Target Start/End: Complemental strand, 22321652 - 22321543
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaatttattcatgtttttca 104  Q
    ||||||||| |||| | |||||||||||||||||||||||| |||| || ||||||||||||||||  || | |||||||||| || || ||| ||  ||    
T  22321652 agatgtttatgtgtcgcctatgttgctgttgttggttatgtgaaatatttatatgccttatgtggaagatgtttgatgtttaagttgttgatgcttcaca 22321553  T
Q  105 ttaatattgt 114  Q
    ||||||||||    
T  22321552 ttaatattgt 22321543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 5 - 114
Target Start/End: Complemental strand, 22336707 - 22336598
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaatttattcatgtttttca 104  Q
    ||||||||| |||| | |||||||||||||||||||||||| |||| || ||||||||||||||||  || | |||||||||| || || ||| ||  ||    
T  22336707 agatgtttatgtgtcgcctatgttgctgttgttggttatgtgaaatatttatatgccttatgtggaagatgtttgatgtttaagttgttgatgcttcaca 22336608  T
Q  105 ttaatattgt 114  Q
    ||||||||||    
T  22336607 ttaatattgt 22336598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 5 - 114
Target Start/End: Original strand, 27409765 - 27409874
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaatttattcatgtttttca 104  Q
    ||||||||| |||| | |||||||||||||||||||||||| |||| || ||||||||||||||||  || | |||||||||| || || ||| ||  ||    
T  27409765 agatgtttatgtgtcgcctatgttgctgttgttggttatgtgaaatatttatatgccttatgtggaagatgtttgatgtttaagttgttgatgcttcaca 27409864  T
Q  105 ttaatattgt 114  Q
    ||||||||||    
T  27409865 ttaatattgt 27409874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 5 - 114
Target Start/End: Complemental strand, 28949712 - 28949603
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaatttattcatgtttttca 104  Q
    ||||||||| |||| | |||||||||||||||||||||||| |||| || ||||||||||||||||  || | |||||||||| || || ||| ||  ||    
T  28949712 agatgtttatgtgtcgcctatgttgctgttgttggttatgtgaaatatttatatgccttatgtggaagatgtttgatgtttaagttgttgatgcttcaca 28949613  T
Q  105 ttaatattgt 114  Q
    ||||||||||    
T  28949612 ttaatattgt 28949603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 31 - 112
Target Start/End: Original strand, 35961596 - 35961677
Alignment:
Q  31 tgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaatttattcatgtttttcattaatatt 112  Q
    ||||||||||||||| ||||  | |||||||||||||||| ||| |||||||||||| || || ||||||||||||||||||    
T  35961596 tgttgttggttatgtgaaataattatatgccttatgtggaaaatgtatgatgtttaagttgttgatgtttttcattaatatt 35961677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 5 - 114
Target Start/End: Complemental strand, 55022855 - 55022746
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaatttattcatgtttttca 104  Q
    ||||||||| |||| | |||||||||||||||||||||||| |||| || ||||||||||||||||  || | |||||||||| || || ||| ||  ||    
T  55022855 agatgtttatgtgtcgcctatgttgctgttgttggttatgtgaaatatttatatgccttatgtggaagatgtttgatgtttaagttgttgatgcttcaca 55022756  T
Q  105 ttaatattgt 114  Q
    ||||||||||    
T  55022755 ttaatattgt 55022746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 5 - 112
Target Start/End: Complemental strand, 21837505 - 21837398
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaatttattcatgtttttca 104  Q
    ||||||||| ||| || |||||||| || |||||||||||| |||| || |||||||||||||||| ||| |||||||||||  || || ||| ||||||    
T  21837505 agatgtttacgtgctgcctatgttgttgatgttggttatgtgaaatatttatatgccttatgtggaaaatgtatgatgtttatgttgttgatgcttttca 21837406  T
Q  105 ttaatatt 112  Q
    | ||||||    
T  21837405 tgaatatt 21837398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 87
Target Start/End: Complemental strand, 11854721 - 11854639
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaa 87  Q
    ||||||||| |||| | |||||||||||||||||||||||| ||||||| ||||| |||||| |||  || ||||||||||||    
T  11854721 agatgtttacgtgtcgcctatgttgctgttgttggttatgtgaaatgtttatatgtcttatgaggaagatgtatgatgtttaa 11854639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 87
Target Start/End: Complemental strand, 14682502 - 14682420
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaa 87  Q
    ||||||||| ||| || |||||||||||||||||||||||| |||| || |||||||||||||||| |||  | |||||||||    
T  14682502 agatgtttatgtgctgcctatgttgctgttgttggttatgtgaaatatttatatgccttatgtggaaaattgacgatgtttaa 14682420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 87
Target Start/End: Original strand, 37439757 - 37439839
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaa 87  Q
    ||||||||| |||| | |||||||||||||||||||||||| |||| || ||||| ||||||||||  || ||||||||||||    
T  37439757 agatgtttacgtgtcgcctatgttgctgttgttggttatgtgaaatatttatatgacttatgtggaagatgtatgatgtttaa 37439839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 5 - 114
Target Start/End: Original strand, 4588894 - 4589003
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaatttattcatgtttttca 104  Q
    ||||||||| |||| | ||||||||||||||||| |||||| |||| || ||||||||||||||||  || | |||||||||| || || ||| ||  ||    
T  4588894 agatgtttatgtgtcgcctatgttgctgttgttgattatgtgaaatatttatatgccttatgtggaagatgtttgatgtttaagttgttgatgcttcaca 4588993  T
Q  105 ttaatattgt 114  Q
    ||||||||||    
T  4588994 ttaatattgt 4589003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 5 - 114
Target Start/End: Complemental strand, 11070056 - 11069947
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaatttattcatgtttttca 104  Q
    ||||||||| |||| | |||||||| ||||||||||||||| |||| || ||||||||||||||||  || | |||||||||| || || ||| ||  ||    
T  11070056 agatgtttatgtgtcgcctatgttgttgttgttggttatgtgaaatatttatatgccttatgtggaagatgtttgatgtttaagttgttgatgcttcaca 11069957  T
Q  105 ttaatattgt 114  Q
    ||||||||||    
T  11069956 ttaatattgt 11069947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 5 - 114
Target Start/End: Original strand, 11914056 - 11914165
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaatttattcatgtttttca 104  Q
    ||||||||| ||| || |||||||| ||||||||| ||||| |||| || |||||| ||||||||| ||| ||||||||| || || || ||| | ||||    
T  11914056 agatgtttacgtgctggctatgttgttgttgttggctatgtgaaatatttatatgcgttatgtggaaaatgtatgatgttaaagttgttgatgctcttca 11914155  T
Q  105 ttaatattgt 114  Q
    ||||||||||    
T  11914156 ttaatattgt 11914165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 123 - 207
Target Start/End: Complemental strand, 11191779 - 11191696
Alignment:
Q  123 ttaagttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttgtttaagttattat 207  Q
    |||||||||||||| |||||||||||||||| || ||||| |||||  ||||||| ||||||||| |||||||||| ||| ||||    
T  11191779 ttaagttgtcatttatcaatgagttgttaatgaaaaactatgtgaagcattaata-ttattaatcgttgttgtttatgttgttat 11191696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 123 - 187
Target Start/End: Complemental strand, 14507721 - 14507657
Alignment:
Q  123 ttaagttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatc 187  Q
    |||||||||||||| |||||||| ||||||| |||||||| || || ||||||||||||||||||    
T  14507721 ttaagttgtcatttatcaatgagatgttaatgaagaactatgtaaagtattaatatttattaatc 14507657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 123 - 207
Target Start/End: Complemental strand, 16728143 - 16728059
Alignment:
Q  123 ttaagttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttgtttaagttattat 207  Q
    |||||||||||||| |||||||| ||||||  |||||||| | ||| |||||| ||||||||||| |||||||||| ||| ||||    
T  16728143 ttaagttgtcatttatcaatgagctgttaacgaagaactatgagaagtattaacatttattaatcgttgttgtttatgttgttat 16728059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 123 - 207
Target Start/End: Original strand, 35065858 - 35065942
Alignment:
Q  123 ttaagttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttgtttaagttattat 207  Q
    ||||||| |||||| ||||| |||||||||  | |||||| ||||| |||||||||||||||||| |||||||||| ||| ||||    
T  35065858 ttaagttatcatttatcaataagttgttaacgatgaactatgtgaagtattaatatttattaatcgttgttgtttatgttgttat 35065942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 124 - 195
Target Start/End: Original strand, 23431336 - 23431407
Alignment:
Q  124 taagttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttgt 195  Q
    |||||||||||||||||||||||| ||||| ||||| || ||| | |||||||||||||||||  |||||||    
T  23431336 taagttgtcatttgtcaatgagttattaatgaagaattatgtggagtattaatatttattaattgttgttgt 23431407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 5 - 87
Target Start/End: Original strand, 54876427 - 54876512
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgtt---gttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaa 87  Q
    ||||||||| ||| ||||||||||| ||||   ||||||||||| |||| || |||||||||||||||| ||| ||||||||||||    
T  54876427 agatgtttacgtgctgtctatgttgttgttgttgttggttatgtgaaatatttatatgccttatgtggaaaatgtatgatgtttaa 54876512  T

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Target: chr3; HSP #67
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 87
Target Start/End: Complemental strand, 15964957 - 15964875
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaa 87  Q
    ||||||||| |||| | |||||||| ||||||||||||||| |||| || ||||| ||||||||||  || ||||||||||||    
T  15964957 agatgtttacgtgtcgcctatgttgttgttgttggttatgtgaaatatttatatgacttatgtggaagatgtatgatgtttaa 15964875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 87
Target Start/End: Complemental strand, 15968881 - 15968799
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaa 87  Q
    ||||||||| |||| | |||||||| ||||||||||||||| |||| || ||||| ||||||||||  || ||||||||||||    
T  15968881 agatgtttacgtgtcgcctatgttgttgttgttggttatgtgaaatatttatatgacttatgtggaagatgtatgatgtttaa 15968799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 87
Target Start/End: Complemental strand, 15972805 - 15972723
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaa 87  Q
    ||||||||| |||| | |||||||| ||||||||||||||| |||| || ||||| ||||||||||  || ||||||||||||    
T  15972805 agatgtttacgtgtcgcctatgttgttgttgttggttatgtgaaatatttatatgacttatgtggaagatgtatgatgtttaa 15972723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 146 - 207
Target Start/End: Complemental strand, 19574745 - 19574684
Alignment:
Q  146 ttgttaataaagaactaagtgaaatattaatatttattaatcattgttgtttaagttattat 207  Q
    |||||||| |||||||| ||||| |||||||||||||||||| |||||||||| ||| ||||    
T  19574745 ttgttaatgaagaactatgtgaagtattaatatttattaatcgttgttgtttatgttgttat 19574684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 114
Target Start/End: Complemental strand, 30065934 - 30065825
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaatttattcatgtttttca 104  Q
    ||||||||| |||| | ||||| ||||||||||| |||||| |||| || ||||||||||||||||  || | |||||||||| || || ||| ||  ||    
T  30065934 agatgtttatgtgtcgcctatgctgctgttgttgattatgtgaaatatttatatgccttatgtggaagatgtttgatgtttaagttgttgatgcttcaca 30065835  T
Q  105 ttaatattgt 114  Q
    ||||||||||    
T  30065834 ttaatattgt 30065825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 5 - 87
Target Start/End: Complemental strand, 14499313 - 14499231
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaa 87  Q
    ||||||||| |||| | | |||| |||||||| ||||||||||||| || ||||||||||||||||  || | ||||||||||    
T  14499313 agatgtttatgtgtcgccaatgtggctgttgtgggttatgtaaaatattaatatgccttatgtggaagatgtttgatgtttaa 14499231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 5 - 87
Target Start/End: Complemental strand, 19775753 - 19775671
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaa 87  Q
    |||||||||  ||| | |||||||||| ||||||||||||| |||| || ||||| ||||||||||  || ||||||||||||    
T  19775753 agatgtttacatgtcgcctatgttgctattgttggttatgtgaaatatttatatgacttatgtggaagatgtatgatgtttaa 19775671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 114
Target Start/End: Complemental strand, 15617362 - 15617253
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaatttattcatgtttttca 104  Q
    ||||||||| |||| | ||||| ||||| ||||| |||||| |||| || ||||||||||||||||  || | |||||||||| || || ||| ||  ||    
T  15617362 agatgtttatgtgtcgcctatgctgctgctgttgattatgtgaaatatttatatgccttatgtggaagatgtttgatgtttaagttgttgatgcttcaca 15617263  T
Q  105 ttaatattgt 114  Q
    ||||||||||    
T  15617262 ttaatattgt 15617253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 179
Target Start/End: Complemental strand, 6145879 - 6145823
Alignment:
Q  123 ttaagttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatt 179  Q
    ||||||| |||||| |||||||||||||||| |||||||| |||||  |||||||||    
T  6145879 ttaagttatcatttatcaatgagttgttaatgaagaactatgtgaaggattaatatt 6145823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 31 - 110
Target Start/End: Complemental strand, 22652174 - 22652096
Alignment:
Q  31 tgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaatttattcatgtttttcattaata 110  Q
    ||||||||||||||| ||||  | |||||| ||||||||| ||| |||||||||||| || || ||| ||||||||||||    
T  22652174 tgttgttggttatgtgaaataattatatgcattatgtgga-aatgtatgatgtttaagttgttgatgcttttcattaata 22652096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 170 - 207
Target Start/End: Original strand, 14251062 - 14251099
Alignment:
Q  170 tattaatatttattaatcattgttgtttaagttattat 207  Q
    |||||||||||||||||| |||||||||| ||||||||    
T  14251062 tattaatatttattaatcgttgttgtttatgttattat 14251099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 87
Target Start/End: Complemental strand, 41871 - 41815
Alignment:
Q  31 tgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaa 87  Q
    ||||||||||||||| ||||    |||||||||||||||| ||| ||||||||||||    
T  41871 tgttgttggttatgtgaaataactatatgccttatgtggaaaatgtatgatgtttaa 41815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 179
Target Start/End: Complemental strand, 16044192 - 16044136
Alignment:
Q  123 ttaagttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatt 179  Q
    |||||||||||||| |||||||||||||||| | ||||||  ||||  |||||||||    
T  16044192 ttaagttgtcatttatcaatgagttgttaatgatgaactatatgaagaattaatatt 16044136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 179
Target Start/End: Complemental strand, 16049668 - 16049612
Alignment:
Q  123 ttaagttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatt 179  Q
    |||||||||||||| |||||||||||||||| | ||||||  ||||  |||||||||    
T  16049668 ttaagttgtcatttatcaatgagttgttaatgatgaactatatgaagaattaatatt 16049612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 179
Target Start/End: Complemental strand, 16059051 - 16058995
Alignment:
Q  123 ttaagttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatt 179  Q
    |||||||||||||| |||||||||||||||| | ||||||  ||||  |||||||||    
T  16059051 ttaagttgtcatttatcaatgagttgttaatgatgaactatatgaagaattaatatt 16058995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0371 (Bit Score: 74; Significance: 5e-34; HSPs: 2)
Name: scaffold0371
Description:

Target: scaffold0371; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 126 - 215
Target Start/End: Original strand, 11531 - 11620
Alignment:
Q  126 agttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttgtttaagttattatgagatgat 215  Q
    ||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||| ||||||||||||||||    
T  11531 agttgtcatttatcaatgagttgttaataaagaactaagtgaagtattaatatttattaatcgttgttgtttatgttattatgagatgat 11620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0371; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 179
Target Start/End: Complemental strand, 14414 - 14358
Alignment:
Q  123 ttaagttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatt 179  Q
    ||||||||||| || |||||||||||||||| | |||||| |||||  |||||||||    
T  14414 ttaagttgtcaattatcaatgagttgttaatgacgaactatgtgaagaattaatatt 14358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 123 - 215
Target Start/End: Original strand, 26017 - 26109
Alignment:
Q  123 ttaagttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttgtttaagttattatgagatgat 215  Q
    ||||||||| | |||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||| ||||||||||||||||    
T  26017 ttaagttgttaattgtcaatgagttgttaataaagaactaagtgaagtattaatatttattaatcgttgttgtttatgttattatgagatgat 26109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 73; Significance: 2e-33; HSPs: 33)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 123 - 215
Target Start/End: Original strand, 12122683 - 12122775
Alignment:
Q  123 ttaagttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttgtttaagttattatgagatgat 215  Q
    |||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||| |||||||||| || |||||||||||||    
T  12122683 ttaagttgtcatttgtcaatgagttgttaatagagaactaagtgaagtattaatatttattaatcgttgttgtttatgtcattatgagatgat 12122775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 123 - 215
Target Start/End: Complemental strand, 31455358 - 31455266
Alignment:
Q  123 ttaagttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttgtttaagttattatgagatgat 215  Q
    ||||||||||| ||||||||||||||||||||||||||||||| || |||||||||||||||||| | |||||||| ||||||||||||||||    
T  31455358 ttaagttgtcaattgtcaatgagttgttaataaagaactaagtaaagtattaatatttattaatcgtggttgtttatgttattatgagatgat 31455266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 123 - 215
Target Start/End: Original strand, 36510005 - 36510097
Alignment:
Q  123 ttaagttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttgtttaagttattatgagatgat 215  Q
    |||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| |||||||||| ||  ||||||||||||    
T  36510005 ttaagttgtcatttgtcaatgagttgttaataaagaactaagcgaagtattaatatttattaatcgttgttgtttatgtcgttatgagatgat 36510097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 126 - 198
Target Start/End: Complemental strand, 39244816 - 39244744
Alignment:
Q  126 agttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttgttta 198  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  39244816 agttgtcatttgtcaatgagttgttaataaagaactaagtgaagtattaatatttattaatcattgttgttta 39244744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 123 - 215
Target Start/End: Original strand, 21555565 - 21555657
Alignment:
Q  123 ttaagttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttgtttaagttattatgagatgat 215  Q
    ||||||||| |||||||||||||||||||||| ||||||| ||||| |||||||||||||||||| |||||||||| ||  ||||||||||||    
T  21555565 ttaagttgttatttgtcaatgagttgttaatagagaactaggtgaagtattaatatttattaatcgttgttgtttatgtcgttatgagatgat 21555657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 123 - 215
Target Start/End: Complemental strand, 31454745 - 31454653
Alignment:
Q  123 ttaagttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttgtttaagttattatgagatgat 215  Q
    ||||||||||| |||| |||||||||||||||||||| ||||| || |||||||||||||||||| | |||||||| ||||||||||||||||    
T  31454745 ttaagttgtcaattgttaatgagttgttaataaagaaataagtaaagtattaatatttattaatcgtggttgtttatgttattatgagatgat 31454653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 123 - 198
Target Start/End: Original strand, 21406871 - 21406946
Alignment:
Q  123 ttaagttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttgttta 198  Q
    |||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||| ||||| ||||    
T  21406871 ttaagttgtcatttatcaatgagttgttaataaagaactatgtgaaatattaatatttattaatcgttgttattta 21406946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 5 - 114
Target Start/End: Complemental strand, 6765909 - 6765800
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaatttattcatgtttttca 104  Q
    |||||||||||||  | |||||||||||||||||||| ||| ||||||| |||||||||||||||| ||| |||||||||||| || || ||  ||||||    
T  6765909 agatgtttaagtgccgcctatgttgctgttgttggttgtgtgaaatgtttatatgccttatgtggaaaatgtatgatgtttaagttgttgatacttttca 6765810  T
Q  105 ttaatattgt 114  Q
    ||||||||||    
T  6765809 ttaatattgt 6765800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 5 - 114
Target Start/End: Original strand, 22107474 - 22107583
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaatttattcatgtttttca 104  Q
    ||||||||| ||| || |||||||||||||||||||||||| |||| || |||||||||||||||| ||| |||||||||||| || || ||| || |||    
T  22107474 agatgtttaggtgctgcctatgttgctgttgttggttatgtcaaatatttatatgccttatgtggaaaatgtatgatgtttaagttgttgatgcttctca 22107573  T
Q  105 ttaatattgt 114  Q
    ||||||||||    
T  22107574 ttaatattgt 22107583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 126 - 194
Target Start/End: Original strand, 5889728 - 5889796
Alignment:
Q  126 agttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttg 194  Q
    |||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||| ||||||    
T  5889728 agttgtcatttgccaatgagttgttaataaagaactaagtgaagtattaatatttattaatcgttgttg 5889796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 126 - 194
Target Start/End: Original strand, 21742110 - 21742178
Alignment:
Q  126 agttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttg 194  Q
    |||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||| ||||||    
T  21742110 agttgtcatttgccaatgagttgttaataaagaactaagtgaagtattaatatttattaatcgttgttg 21742178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 123 - 207
Target Start/End: Original strand, 23202940 - 23203024
Alignment:
Q  123 ttaagttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttgtttaagttattat 207  Q
    ||||||||||||||||||||||||||||||| |||||||| ||||| ||||||||||| |||||| |||||||||| ||| ||||    
T  23202940 ttaagttgtcatttgtcaatgagttgttaatgaagaactatgtgaagtattaatattttttaatcgttgttgtttatgttgttat 23203024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 123 - 207
Target Start/End: Complemental strand, 26761279 - 26761195
Alignment:
Q  123 ttaagttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttgtttaagttattat 207  Q
    |||||||||||||| |||||||||||||||| |||||||| ||||| |||||||||||||||||| |||||||||| ||| ||||    
T  26761279 ttaagttgtcatttatcaatgagttgttaatgaagaactatgtgaagtattaatatttattaatcgttgttgtttatgtttttat 26761195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 123 - 198
Target Start/End: Complemental strand, 16227192 - 16227117
Alignment:
Q  123 ttaagttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttgttta 198  Q
    ||||||||||||||||||||||||| ||||| |||||||| ||||| |||||||||||||||||| ||||||||||    
T  16227192 ttaagttgtcatttgtcaatgagttattaatgaagaactatgtgaagtattaatatttattaatcgttgttgttta 16227117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 123 - 207
Target Start/End: Complemental strand, 20565270 - 20565186
Alignment:
Q  123 ttaagttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttgtttaagttattat 207  Q
    |||||||||||||| |||||||||||||||  |||||||| ||||| |||||||||||||||||| |||||||||| ||| ||||    
T  20565270 ttaagttgtcatttatcaatgagttgttaacgaagaactatgtgaagtattaatatttattaatcgttgttgtttatgttgttat 20565186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 123 - 198
Target Start/End: Complemental strand, 17874882 - 17874807
Alignment:
Q  123 ttaagttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttgttta 198  Q
    ||||||||||| ||||||||||||||||||| ||||| |||||||| |||||||||||||||||| | ||||||||    
T  17874882 ttaagttgtcaattgtcaatgagttgttaatgaagaattaagtgaagtattaatatttattaatcgtggttgttta 17874807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 126 - 215
Target Start/End: Original strand, 21558233 - 21558322
Alignment:
Q  126 agttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttgtttaagttattatgagatgat 215  Q
    ||||| ||||||||||||||||||||||| | || |||||||| ||||||||||||| |||| |||||||||| ||  ||||||||||||    
T  21558233 agttggcatttgtcaatgagttgttaatagataattaagtgaagtattaatatttatcaatcgttgttgtttatgtcgttatgagatgat 21558322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 114
Target Start/End: Original strand, 33895685 - 33895794
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaatttattcatgtttttca 104  Q
    ||||||||| ||| || ||||||||||||||| |||| ||| |||| || |||||||||||||||| ||| |||||||||||| || || ||| | ||||    
T  33895685 agatgtttacgtgctgcctatgttgctgttgtgggttttgtgaaatatttatatgccttatgtggaaaatgtatgatgtttaagttgttgatgctcttca 33895784  T
Q  105 ttaatattgt 114  Q
    ||||||||||    
T  33895785 ttaatattgt 33895794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 31 - 114
Target Start/End: Complemental strand, 17011069 - 17010986
Alignment:
Q  31 tgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaatttattcatgtttttcattaatattgt 114  Q
    ||||||||||||||| ||||  | |||||||||||||||| ||| |||||||||||| || || ||||||||||||||||||||    
T  17011069 tgttgttggttatgtgaaataattatatgccttatgtggaaaatgtatgatgtttaagttgttgatgtttttcattaatattgt 17010986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 5 - 114
Target Start/End: Complemental strand, 18356277 - 18356168
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaatttattcatgtttttca 104  Q
    ||||||||| |||| | |||||||||||||||||||||||| |||| || ||||||||||||||||  || |||||||||| | || || ||| ||  ||    
T  18356277 agatgtttacgtgtcgcctatgttgctgttgttggttatgtgaaatatttatatgccttatgtggaagatgtatgatgtttgagttgttgatgcttcaca 18356178  T
Q  105 ttaatattgt 114  Q
    ||||||||||    
T  18356177 ttaatattgt 18356168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 5 - 114
Target Start/End: Complemental strand, 20295832 - 20295723
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaatttattcatgtttttca 104  Q
    ||||||||| |||| | |||||||||||||||||||||||| |||| || ||||||||||||||||  || | |||||||||| || || ||| ||  ||    
T  20295832 agatgtttatgtgtcgcctatgttgctgttgttggttatgtgaaatatttatatgccttatgtggaagatgtttgatgtttaagttgttgatgcttcaca 20295733  T
Q  105 ttaatattgt 114  Q
    ||||||||||    
T  20295732 ttaatattgt 20295723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 5 - 114
Target Start/End: Original strand, 20910956 - 20911065
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaatttattcatgtttttca 104  Q
    ||||||||| |||| | |||||||||||||||||||||||| |||| || ||||| ||||||||||  || |||||||||||| || || ||| ||  ||    
T  20910956 agatgtttacgtgtcgcctatgttgctgttgttggttatgtgaaatatttatatgtcttatgtggaagatgtatgatgtttaagttgttgatgcttcaca 20911055  T
Q  105 ttaatattgt 114  Q
    ||||||||||    
T  20911056 ttaatattgt 20911065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 31 - 114
Target Start/End: Complemental strand, 263201 - 263118
Alignment:
Q  31 tgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaatttattcatgtttttcattaatattgt 114  Q
    ||||||||||||||| ||||  | || ||||||||||||| ||| |||||||||||| || || ||||||||||||||||||||    
T  263201 tgttgttggttatgtgaaataattatgtgccttatgtggaaaatgtatgatgtttaagttgttgatgtttttcattaatattgt 263118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 87
Target Start/End: Original strand, 40723708 - 40723790
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaa 87  Q
    ||||||||| |||| | |||||||| ||||||||||||||| |||| || ||||||||||||||||  || ||||||||||||    
T  40723708 agatgtttacgtgtcgcctatgttgttgttgttggttatgtgaaatatttatatgccttatgtggaagatgtatgatgtttaa 40723790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 5 - 114
Target Start/End: Original strand, 15236956 - 15237065
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaatttattcatgtttttca 104  Q
    ||||||||| |||| | |||||||| ||||||||||||||| |||| || ||||||||||||||||  || | |||||||||| || || ||| ||  ||    
T  15236956 agatgtttatgtgtcgcctatgttgttgttgttggttatgtgaaatatttatatgccttatgtggaagatgtttgatgtttaagttgttgatgcttcaca 15237055  T
Q  105 ttaatattgt 114  Q
    ||||||||||    
T  15237056 ttaatattgt 15237065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 5 - 114
Target Start/End: Original strand, 19472841 - 19472950
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaatttattcatgtttttca 104  Q
    ||||||||| |||| | |||||||| ||||||||||||||| |||| || ||||||||||||||||  || | |||||||||| || || ||| ||  ||    
T  19472841 agatgtttatgtgtcgcctatgttgttgttgttggttatgtgaaatatttatatgccttatgtggaagatgtttgatgtttaagttgttgatgcttcaca 19472940  T
Q  105 ttaatattgt 114  Q
    ||||||||||    
T  19472941 ttaatattgt 19472950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 22 - 114
Target Start/End: Complemental strand, 29448067 - 29447975
Alignment:
Q  22 ctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgttt-aatttattcatgtttttcattaatattgt 114  Q
    |||||||||||||||||||||||| ||||  | |||||||||||||||| ||| ||| |||||| |||| ||| ||| ||||||||||||||||    
T  29448067 ctatgttgctgttgttggttatgtgaaataattatatgccttatgtgga-aatgtataatgtttaaattgattgatgcttttcattaatattgt 29447975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 87
Target Start/End: Complemental strand, 10753349 - 10753267
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaa 87  Q
    |||||||||  ||||| |||||||||| ||||||||||||| |||| || ||||| ||||||||||  || ||||||||||||    
T  10753349 agatgtttacatgttgcctatgttgctattgttggttatgtgaaatatttatatgacttatgtggaagatgtatgatgtttaa 10753267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 123 - 198
Target Start/End: Complemental strand, 12354220 - 12354146
Alignment:
Q  123 ttaagttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttgttta 198  Q
    ||||||| ||| || |||||||||||||||| |||||||| ||||| |||||||| ||||||||  ||||||||||    
T  12354220 ttaagttatcaattatcaatgagttgttaatgaagaactatgtgaattattaata-ttattaattgttgttgttta 12354146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 83
Target Start/End: Original strand, 20910851 - 20910914
Alignment:
Q  19 tgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgt 83  Q
    |||||||||||||||||||| |||||| |||| || ||||||||||| |||| ||| ||||||||    
T  20910851 tgtctatgttgctgttgttgattatgtgaaatatttatatgccttat-tggaaaatgtatgatgt 20910914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 198
Target Start/End: Original strand, 29915584 - 29915655
Alignment:
Q  126 agttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttgttta 198  Q
    |||||||||| || |||||||| || ||||||||||||||||| | ||||||||||||||   ||||||||||    
T  29915584 agttgtcatt-gttaatgagttattgataaagaactaagtgaagtgttaatatttattaaatgttgttgttta 29915655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 22 - 87
Target Start/End: Complemental strand, 18356379 - 18356315
Alignment:
Q  22 ctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaa 87  Q
    |||||||||||||||||||||| | |||| || |||||| |||| |||| ||| ||||||||||||    
T  18356379 ctatgttgctgttgttggttatctgaaatatttatatgctttat-tggaaaatgtatgatgtttaa 18356315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 87
Target Start/End: Original strand, 33473272 - 33473328
Alignment:
Q  31 tgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaa 87  Q
    ||||||||||||||| ||||    |||||||||||||||| ||| ||||||||||||    
T  33473272 tgttgttggttatgtgaaataactatatgccttatgtggaaaatgtatgatgtttaa 33473328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 73; Significance: 2e-33; HSPs: 46)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 123 - 215
Target Start/End: Complemental strand, 356855 - 356763
Alignment:
Q  123 ttaagttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttgtttaagttattatgagatgat 215  Q
    ||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||| | |||||||| ||||||||||||||||    
T  356855 ttaagttgtcaattgtcaatgagttgttaataaagaactaagtgaagtattaatatttattaatcgtggttgtttatgttattatgagatgat 356763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 126 - 198
Target Start/End: Complemental strand, 28576806 - 28576734
Alignment:
Q  126 agttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttgttta 198  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  28576806 agttgtcatttgtcaatgagttgttaataaagaactaagtgaagtattaatatttattaatcattgttgttta 28576734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 126 - 198
Target Start/End: Original strand, 45030328 - 45030400
Alignment:
Q  126 agttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttgttta 198  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  45030328 agttgtcatttgtcaatgagttgttaataaagaactaagtgaagtattaatatttattaatcattgttgttta 45030400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 123 - 214
Target Start/End: Complemental strand, 9974742 - 9974651
Alignment:
Q  123 ttaagttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttgtttaagttattatgagatga 214  Q
    |||| |||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||| | ||||||||  ||||||||||||||    
T  9974742 ttaaattgtcaattgtcaatgagttgttaataaagaactaagtgaagtattaatatttattaatcgtggttgtttatattattatgagatga 9974651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 123 - 207
Target Start/End: Complemental strand, 25085267 - 25085183
Alignment:
Q  123 ttaagttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttgtttaagttattat 207  Q
    |||||||||||||| |||||||||| ||||| |||||||||||||| |||||||||||||||||| |||||||||| ||||||||    
T  25085267 ttaagttgtcatttatcaatgagttattaatgaagaactaagtgaagtattaatatttattaatcgttgttgtttatgttattat 25085183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 5 - 112
Target Start/End: Complemental strand, 27472500 - 27472393
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaatttattcatgtttttca 104  Q
    ||||||||| ||| ||||||||||||||||||||||||||| |||| || |||||||||||||||| ||| |||||||||||| || || ||| | ||||    
T  27472500 agatgtttacgtgctgtctatgttgctgttgttggttatgtgaaatatttatatgccttatgtggaaaatgtatgatgtttaagttgttgatgctcttca 27472401  T
Q  105 ttaatatt 112  Q
    ||||||||    
T  27472400 ttaatatt 27472393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 123 - 207
Target Start/End: Original strand, 10897863 - 10897947
Alignment:
Q  123 ttaagttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttgtttaagttattat 207  Q
    |||||||||||||| |||||||||||||||| |||||||| ||||| |||||||||||||||||| |||||||||| ||| ||||    
T  10897863 ttaagttgtcatttatcaatgagttgttaatgaagaactatgtgaagtattaatatttattaatcgttgttgtttatgttgttat 10897947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 5 - 114
Target Start/End: Original strand, 21081776 - 21081885
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaatttattcatgtttttca 104  Q
    ||||||||| ||| || |||||||||||||||||||||||| |||| || |||| ||||||||| | ||| |||||||||||| ||||| ||| | ||||    
T  21081776 agatgtttacgtgctgcctatgttgctgttgttggttatgtgaaatatttatataccttatgtgaaaaatgtatgatgtttaagttattgatgctcttca 21081875  T
Q  105 ttaatattgt 114  Q
    ||||||||||    
T  21081876 ttaatattgt 21081885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 5 - 114
Target Start/End: Original strand, 22459602 - 22459711
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaatttattcatgtttttca 104  Q
    ||||||||| |||||| ||||||||||||||| |||||||| |||| || |||||||||||||||| ||| ||| ||||| || || || ||| ||||||    
T  22459602 agatgtttatgtgttgcctatgttgctgttgtcggttatgtgaaatatttatatgccttatgtggaaaatgtataatgttgaagttgttgatgcttttca 22459701  T
Q  105 ttaatattgt 114  Q
    ||||||||||    
T  22459702 ttaatattgt 22459711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 5 - 114
Target Start/End: Original strand, 23069323 - 23069432
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaatttattcatgtttttca 104  Q
    ||||||||| ||| |  |||||||||||||||||||||||| |||| || |||||||||||||||| ||| |||||||||||| || || ||| || |||    
T  23069323 agatgtttacgtgctacctatgttgctgttgttggttatgtgaaatatttatatgccttatgtggaaaatgtatgatgtttaagttgttgatgcttctca 23069422  T
Q  105 ttaatattgt 114  Q
    ||||||||||    
T  23069423 ttaatattgt 23069432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 5 - 114
Target Start/End: Original strand, 23707328 - 23707437
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaatttattcatgtttttca 104  Q
    ||||||||| ||| || |||||||||||||||||||||||| |||| || |||||| ||||||||| ||| |||||||||||| || || ||| | ||||    
T  23707328 agatgtttacgtgctgcctatgttgctgttgttggttatgtgaaatatttatatgcattatgtggaaaatgtatgatgtttaagttgttgatgctcttca 23707427  T
Q  105 ttaatattgt 114  Q
    ||||||||||    
T  23707428 ttaatattgt 23707437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 5 - 114
Target Start/End: Complemental strand, 24918191 - 24918082
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaatttattcatgtttttca 104  Q
    ||||||||| ||| || |||||||||||||||||||||||| |||| || |||||| ||||||||| ||| |||||||||||| || || ||| | ||||    
T  24918191 agatgtttacgtgctgcctatgttgctgttgttggttatgtgaaatatttatatgcgttatgtggaaaatgtatgatgtttaagttgttgatgctcttca 24918092  T
Q  105 ttaatattgt 114  Q
    ||||||||||    
T  24918091 ttaatattgt 24918082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 123 - 207
Target Start/End: Original strand, 18389495 - 18389579
Alignment:
Q  123 ttaagttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttgtttaagttattat 207  Q
    |||||||||||||| |||||||||||||||  |||||||| ||||| |||||||||||||||||| |||||||||| ||| ||||    
T  18389495 ttaagttgtcatttatcaatgagttgttaacgaagaactatgtgaagtattaatatttattaatcgttgttgtttatgttgttat 18389579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 123 - 215
Target Start/End: Complemental strand, 22500700 - 22500609
Alignment:
Q  123 ttaagttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttgtttaagttattatgagatgat 215  Q
    ||||||||||| ||||||| ||||||||||| |||||||||||||| |||||||||||||||||| | |||| |||  |||||||||||||||    
T  22500700 ttaagttgtcaattgtcaacgagttgttaatgaagaactaagtgaagtattaatatttattaatcgtggttg-ttatattattatgagatgat 22500609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 123 - 215
Target Start/End: Complemental strand, 22508634 - 22508543
Alignment:
Q  123 ttaagttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttgtttaagttattatgagatgat 215  Q
    ||||||||||| ||||||| ||||||||||| |||||||||||||| |||||||||||||||||| | |||| |||  |||||||||||||||    
T  22508634 ttaagttgtcaattgtcaacgagttgttaatgaagaactaagtgaagtattaatatttattaatcgtggttg-ttatattattatgagatgat 22508543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 123 - 215
Target Start/End: Complemental strand, 24883279 - 24883187
Alignment:
Q  123 ttaagttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttgtttaagttattatgagatgat 215  Q
    ||||||||||| |||||||||||||||||||||||||||  | ||| |||||||||||||||||| |||||||||| ||  ||||||| ||||    
T  24883279 ttaagttgtcaattgtcaatgagttgttaataaagaacttggagaagtattaatatttattaatcgttgttgtttatgtcgttatgaggtgat 24883187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 5 - 112
Target Start/End: Original strand, 18358773 - 18358880
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaatttattcatgtttttca 104  Q
    ||||||||||||   | |||||||||||||||||||| ||| ||||||| |||||||||||||||| ||| || ||||||||| || || ||| ||||||    
T  18358773 agatgtttaagtaccgcctatgttgctgttgttggttttgtgaaatgtttatatgccttatgtggaaaatgtacgatgtttaagttgttgatgcttttca 18358872  T
Q  105 ttaatatt 112  Q
    ||||||||    
T  18358873 ttaatatt 18358880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 114
Target Start/End: Original strand, 34874252 - 34874361
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaatttattcatgtttttca 104  Q
    |||||||||||||  | |||||||| ||||||||||||||| |||| || |||||||||||||| | ||| |||||||||||| || || ||| | ||||    
T  34874252 agatgtttaagtgccgcctatgttgttgttgttggttatgtgaaatatttatatgccttatgtgaaaaatgtatgatgtttaagttgttgatgctcttca 34874351  T
Q  105 ttaatattgt 114  Q
    ||||||||||    
T  34874352 ttaatattgt 34874361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 5 - 87
Target Start/End: Complemental strand, 9784762 - 9784680
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaa 87  Q
    ||||||||| ||| || |||||||||||||||||||||||| |||| || |||||||||||||||| ||| || |||||||||    
T  9784762 agatgtttatgtgctgcctatgttgctgttgttggttatgtgaaatatttatatgccttatgtggaaaatgtacgatgtttaa 9784680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 5 - 87
Target Start/End: Complemental strand, 24681495 - 24681413
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaa 87  Q
    ||||||||| ||| || |||||||||||||||||||||||| |||| || |||||| ||||||||| ||| ||||||||||||    
T  24681495 agatgtttacgtgctgcctatgttgctgttgttggttatgtgaaatatttatatgcgttatgtggaaaatgtatgatgtttaa 24681413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 5 - 87
Target Start/End: Complemental strand, 31345197 - 31345115
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaa 87  Q
    ||||||||| |||| | |||||||||||||||||||||||| |||| || ||||||||||||||||  || ||||||||||||    
T  31345197 agatgtttacgtgtcgcctatgttgctgttgttggttatgtgaaatatttatatgccttatgtggaagatgtatgatgtttaa 31345115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 126 - 215
Target Start/End: Complemental strand, 22688537 - 22688448
Alignment:
Q  126 agttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttgtttaagttattatgagatgat 215  Q
    ||||||||||| |||||||||| | || || ||| || |||||||||||||||||||||||| |||||||||| ||| |||| |||||||    
T  22688537 agttgtcatttatcaatgagttataaaaaaggaaatatgtgaaatattaatatttattaatcgttgttgtttatgttgttataagatgat 22688448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 5 - 114
Target Start/End: Original strand, 24628600 - 24628709
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaatttattcatgtttttca 104  Q
    ||||||||| |||| | |||||||||||||||||||||||| |||| || ||||||||||||||||  || | |||||||||| || || ||| ||  ||    
T  24628600 agatgtttatgtgtcgcctatgttgctgttgttggttatgtgaaatatttatatgccttatgtggaagatgtttgatgtttaagttgttgatgcttcaca 24628699  T
Q  105 ttaatattgt 114  Q
    ||||||||||    
T  24628700 ttaatattgt 24628709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 5 - 114
Target Start/End: Complemental strand, 24671076 - 24670967
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaatttattcatgtttttca 104  Q
    ||||||||| ||  || |||||||||||||||||||||||| |||| || |||||  ||||||||| ||| |||||||||||| || || ||| | ||||    
T  24671076 agatgtttacgtactgcctatgttgctgttgttggttatgtgaaatatttatatgggttatgtggaaaatgtatgatgtttaagttgttgatgctcttca 24670977  T
Q  105 ttaatattgt 114  Q
    ||||||||||    
T  24670976 ttaatattgt 24670967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 5 - 114
Target Start/End: Original strand, 27379554 - 27379663
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaatttattcatgtttttca 104  Q
    ||||||||| |||| | |||||||||||||||||||||||| |||| || ||||||||||||||||  || | |||||||||| || || ||| ||  ||    
T  27379554 agatgtttatgtgtcgcctatgttgctgttgttggttatgtgaaatatttatatgccttatgtggaagatgtttgatgtttaagttgttgatgcttcaca 27379653  T
Q  105 ttaatattgt 114  Q
    ||||||||||    
T  27379654 ttaatattgt 27379663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 5 - 114
Target Start/End: Original strand, 27383600 - 27383709
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaatttattcatgtttttca 104  Q
    ||||||||| |||| | |||||||||||||||||||||||| |||| || ||||||||||||||||  || | |||||||||| || || ||| ||  ||    
T  27383600 agatgtttatgtgtcgcctatgttgctgttgttggttatgtgaaatatttatatgccttatgtggaagatgtttgatgtttaagttgttgatgcttcaca 27383699  T
Q  105 ttaatattgt 114  Q
    ||||||||||    
T  27383700 ttaatattgt 27383709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 5 - 114
Target Start/End: Complemental strand, 27601781 - 27601672
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaatttattcatgtttttca 104  Q
    ||||||||| |||| | |||||||||||||||||||||||| |||| || ||||||||||||||||  || | |||||||||| || || ||| ||  ||    
T  27601781 agatgtttatgtgtcgcctatgttgctgttgttggttatgtgaaatatttatatgccttatgtggaagatgtttgatgtttaagttgttgatgcttcaca 27601682  T
Q  105 ttaatattgt 114  Q
    ||||||||||    
T  27601681 ttaatattgt 27601672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 123 - 207
Target Start/End: Complemental strand, 19357801 - 19357717
Alignment:
Q  123 ttaagttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttgtttaagttattat 207  Q
    ||||||||| |||| |||||||||||||||  |||||||| ||| | |||||||||||||||||| |||||||||| ||| ||||    
T  19357801 ttaagttgttatttatcaatgagttgttaaagaagaactatgtgcattattaatatttattaatcgttgttgtttatgttgttat 19357717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 127 - 207
Target Start/End: Complemental strand, 25140756 - 25140677
Alignment:
Q  127 gttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttgtttaagttattat 207  Q
    |||||||||| |||||||||||||||| |||||||| ||||| |||||||| ||||||||| |||||||||| ||| ||||    
T  25140756 gttgtcatttatcaatgagttgttaatgaagaactatgtgaagtattaata-ttattaatcgttgttgtttatgttgttat 25140677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 87
Target Start/End: Complemental strand, 1283374 - 1283292
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaa 87  Q
    ||||||||| |||| | |||||||||||||||||||||||| |||| || ||||| ||||||||||  || ||||||||||||    
T  1283374 agatgtttacgtgtcgcctatgttgctgttgttggttatgtgaaatatttatatgacttatgtggaagatgtatgatgtttaa 1283292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 87
Target Start/End: Original strand, 30345112 - 30345194
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaa 87  Q
    ||||||||| |||| | |||||||||||||||||||||||| |||| || ||||| ||||||||||  || ||||||||||||    
T  30345112 agatgtttacgtgtcgcctatgttgctgttgttggttatgtgaaatatttatatgacttatgtggaagatgtatgatgtttaa 30345194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 5 - 114
Target Start/End: Original strand, 12901633 - 12901742
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaatttattcatgtttttca 104  Q
    ||||||||| |||| | |||||||||| ||||||||||||| |||| || ||||||||||||||||  || | |||||||||| || || ||| ||  ||    
T  12901633 agatgtttatgtgtcgcctatgttgctattgttggttatgtgaaatatttatatgccttatgtggaagatgtttgatgtttaagttgttgatgcttcaca 12901732  T
Q  105 ttaatattgt 114  Q
    ||||||||||    
T  12901733 ttaatattgt 12901742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 123 - 207
Target Start/End: Original strand, 5032599 - 5032683
Alignment:
Q  123 ttaagttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttgtttaagttattat 207  Q
    ||||||||| |||| |||||||||||||||| || |||||  |||| ||||||||||| |||||| |||||||||| ||| ||||    
T  5032599 ttaagttgtaatttatcaatgagttgttaatgaataactatatgaagtattaatatttgttaatcgttgttgtttatgttgttat 5032683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 123 - 179
Target Start/End: Original strand, 10744157 - 10744213
Alignment:
Q  123 ttaagttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatt 179  Q
    |||||||||||||| |||||||||||||||| |||||||| ||||| ||||||||||    
T  10744157 ttaagttgtcatttatcaatgagttgttaatgaagaactatgtgaagtattaatatt 10744213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 141 - 213
Target Start/End: Complemental strand, 23285513 - 23285441
Alignment:
Q  141 atgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttgtttaagttattatgagatg 213  Q
    ||||||||||| | |||||||||  |||||||||||||||||||||| ||||||||||  || ||||||||||    
T  23285513 atgagttgttatttaagaactaaaggaaatattaatatttattaatcgttgttgtttatattgttatgagatg 23285441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 123 - 207
Target Start/End: Original strand, 24782140 - 24782221
Alignment:
Q  123 ttaagttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttgtttaagttattat 207  Q
    ||||||||| |||| |||||||||||||||   ||||||| | ||| |||||||||||||||||| |||||||||| ||| ||||    
T  24782140 ttaagttgtaatttatcaatgagttgttaa---agaactatgggaagtattaatatttattaatcgttgttgtttatgttgttat 24782221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 87
Target Start/End: Original strand, 41531125 - 41531207
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaa 87  Q
    ||||||||| |||| | ||||||| |||||||||||||||| |||| || ||||| ||||||||||  || ||||||||||||    
T  41531125 agatgtttacgtgtcgcctatgttactgttgttggttatgtgaaatatttatatgacttatgtggaagatgtatgatgtttaa 41531207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 114
Target Start/End: Original strand, 10101766 - 10101875
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaatttattcatgtttttca 104  Q
    ||||||| | |||| | |||||||| |||||||| |||||| |||| || ||||||||||||||||  || | |||||||||| || || ||||||  ||    
T  10101766 agatgttcatgtgtcgcctatgttgttgttgttgattatgtgaaatatttatatgccttatgtggaagatgtttgatgtttaagttgttgatgtttcaca 10101865  T
Q  105 ttaatattgt 114  Q
    ||||||||||    
T  10101866 ttaatattgt 10101875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 31 - 114
Target Start/End: Complemental strand, 21914966 - 21914883
Alignment:
Q  31 tgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaatttattcatgtttttcattaatattgt 114  Q
    |||||| |||||||| ||||  | |||||||||||||||| |||||||||||||||| || || ||| ||||  ||||||||||    
T  21914966 tgttgtaggttatgtgaaataattatatgccttatgtggaaaatatatgatgtttaagttgttgatgcttttatttaatattgt 21914883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 70
Target Start/End: Complemental strand, 24649342 - 24649277
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtgga 70  Q
    ||||||||| |||| | ||| |||| ||||||||||||||| |||| || ||||||||||||||||    
T  24649342 agatgtttatgtgtcgcctaggttgttgttgttggttatgtgaaatatttatatgccttatgtgga 24649277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 122 - 179
Target Start/End: Complemental strand, 27860149 - 27860092
Alignment:
Q  122 tttaagttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatt 179  Q
    |||||||||||| || |||||||||||||||| |||||||| |||||  |||||||||    
T  27860149 tttaagttgtcaattatcaatgagttgttaatgaagaactatgtgaagaattaatatt 27860092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 123 - 162
Target Start/End: Original strand, 18391502 - 18391541
Alignment:
Q  123 ttaagttgtcatttgtcaatgagttgttaataaagaacta 162  Q
    |||||||||||||| |||||||||||||||| ||||||||    
T  18391502 ttaagttgtcatttatcaatgagttgttaatgaagaacta 18391541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 31 - 114
Target Start/End: Original strand, 34492200 - 34492283
Alignment:
Q  31 tgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaatttattcatgtttttcattaatattgt 114  Q
    ||||||||||||||| ||||  | |||| ||||||||||| ||| ||| |||||||| || || ||| |||| |||||||||||    
T  34492200 tgttgttggttatgtgaaataattatataccttatgtggaaaatgtataatgtttaagttgttgatgctttttattaatattgt 34492283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 205
Target Start/End: Complemental strand, 21367638 - 21367558
Alignment:
Q  125 aagttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttgtttaagttatt 205  Q
    ||||||||||||   |||||||||||||| |  ||||| ||||||||| ||||||  ||| | ||||||||||| ||||||    
T  21367638 aagttgtcatttactaatgagttgttaatgagaaactatgtgaaatatcaatattatttattgattgttgtttatgttatt 21367558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 109 - 153
Target Start/End: Complemental strand, 22689512 - 22689468
Alignment:
Q  109 tattgtcattatatttaagttgtcatttgtcaatgagttgttaat 153  Q
    ||||||| || | ||||||||||||||| ||||||||||||||||    
T  22689512 tattgtcgttgtctttaagttgtcatttttcaatgagttgttaat 22689468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 175 - 215
Target Start/End: Complemental strand, 24883152 - 24883112
Alignment:
Q  175 atatttattaatcattgttgtttaagttattatgagatgat 215  Q
    ||||||||||||| | |||||||| ||||||||||||||||    
T  24883152 atatttattaatcgtggttgtttatgttattatgagatgat 24883112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0134 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold0134
Description:

Target: scaffold0134; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 123 - 213
Target Start/End: Original strand, 10419 - 10509
Alignment:
Q  123 ttaagttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttgtttaagttattatgagatg 213  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||  ||||||||||    
T  10419 ttaagttatcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcgttgttgtttatgtcgttatgagatg 10509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 8 - 114
Target Start/End: Complemental strand, 85623 - 85517
Alignment:
Q  8 tgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaatttattcatgtttttcatta 107  Q
    |||||||||| || |||||||||||||||||||||||| ||||||||| |||||||||||||| |||||||||||||||| || || ||| |||||||||    
T  85623 tgtttaagtgctgcctatgttgctgttgttggttatgtgaaatgttcagatgccttatgtggaaaatatatgatgtttaagttgttgatgcttttcatta 85524  T
Q  108 atattgt 114  Q
    |||||||    
T  85523 atattgt 85517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 71; Significance: 3e-32; HSPs: 51)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 123 - 213
Target Start/End: Original strand, 20734631 - 20734721
Alignment:
Q  123 ttaagttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttgtttaagttattatgagatg 213  Q
    ||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||| | |||||||| ||||||||||||||    
T  20734631 ttaagttgtcaattgtcaatgagttgttaataaagaactaagtgaagtattaatatttattaatcgtggttgtttatgttattatgagatg 20734721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 4 - 114
Target Start/End: Original strand, 14979426 - 14979536
Alignment:
Q  4 aagatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaatttattcatgtttttc 103  Q
    |||||||||||||| || |||||||||||||||||||||||| |||| || |||||||||||||||| ||| |||||||||||| || ||  || |||||    
T  14979426 aagatgtttaagtgatgcctatgttgctgttgttggttatgtgaaatatttatatgccttatgtggaaaatgtatgatgtttaagttgttggtgattttc 14979525  T
Q  104 attaatattgt 114  Q
    |||||||||||    
T  14979526 attaatattgt 14979536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 126 - 198
Target Start/End: Original strand, 19859413 - 19859485
Alignment:
Q  126 agttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttgttta 198  Q
    |||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||    
T  19859413 agttttcatttgtcaatgagttgttaataaagaactaagtgaagtattaatatttattaatcattattgttta 19859485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 126 - 198
Target Start/End: Original strand, 25957190 - 25957262
Alignment:
Q  126 agttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttgttta 198  Q
    ||||||||||||| ||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||    
T  25957190 agttgtcatttgttaatgagttgttaataaagaactaagtgaagtgttaatatttattaatcattgttgttta 25957262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 126 - 198
Target Start/End: Original strand, 25965237 - 25965309
Alignment:
Q  126 agttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttgttta 198  Q
    ||||||||||||| ||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||    
T  25965237 agttgtcatttgttaatgagttgttaataaagaactaagtgaagtgttaatatttattaatcattgttgttta 25965309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 123 - 207
Target Start/End: Original strand, 20411978 - 20412062
Alignment:
Q  123 ttaagttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttgtttaagttattat 207  Q
    |||||||||||||| |||||||||||||||| |||||||| ||||| |||||||||||||||||| |||||||||| ||| ||||    
T  20411978 ttaagttgtcatttatcaatgagttgttaatgaagaactatgtgaagtattaatatttattaatcgttgttgtttatgttgttat 20412062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 5 - 114
Target Start/End: Original strand, 17377837 - 17377946
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaatttattcatgtttttca 104  Q
    ||||||||| ||| ||  ||||||||||||||||||||||| |||| || |||||| ||||||||| ||| |||||||||||| || || ||||| ||||    
T  17377837 agatgtttacgtgctgcatatgttgctgttgttggttatgtgaaatatttatatgcgttatgtggaaaatgtatgatgtttaagttgtttatgttcttca 17377936  T
Q  105 ttaatattgt 114  Q
    ||||||||||    
T  17377937 ttaatattgt 17377946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 5 - 114
Target Start/End: Original strand, 28103938 - 28104047
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaatttattcatgtttttca 104  Q
    ||||||||| ||| || |||||||| ||||||||||||||| |||| || |||||||||||||||| ||| |||||||||||| || || ||| | ||||    
T  28103938 agatgtttacgtgctgcctatgttgttgttgttggttatgtgaaatatttatatgccttatgtggaaaatgtatgatgtttaagttgttgatgctcttca 28104037  T
Q  105 ttaatattgt 114  Q
    ||||||||||    
T  28104038 ttaatattgt 28104047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 114
Target Start/End: Complemental strand, 17743458 - 17743349
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaatttattcatgtttttca 104  Q
    ||||||||| ||| |  |||||||||||||||||||||||| |||| || |||||||||||||||| ||| |||||||||||| || || ||  || |||    
T  17743458 agatgtttacgtgctacctatgttgctgttgttggttatgtgaaatatttatatgccttatgtggaaaatgtatgatgtttaagttgttgatacttctca 17743359  T
Q  105 ttaatattgt 114  Q
    ||||||||||    
T  17743358 ttaatattgt 17743349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 114
Target Start/End: Original strand, 19773582 - 19773691
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaatttattcatgtttttca 104  Q
    ||||||||| ||| ||  ||||||||||||||||||||||| |||| || |||||||||||||||| ||| |||||||||||| || || ||| ||  ||    
T  19773582 agatgtttacgtgctgcatatgttgctgttgttggttatgtgaaatatttatatgccttatgtggaaaatgtatgatgtttaagttgttgatgcttcaca 19773681  T
Q  105 ttaatattgt 114  Q
    ||||||||||    
T  19773682 ttaatattgt 19773691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 114
Target Start/End: Complemental strand, 23414965 - 23414856
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaatttattcatgtttttca 104  Q
    ||||||||| |||| | |||||||||||||||||||||||| |||| || ||||||||||||||||  || |||||||||||| || || ||| ||  ||    
T  23414965 agatgtttacgtgtcgcctatgttgctgttgttggttatgtgaaatatttatatgccttatgtggaagatgtatgatgtttaagttgttgatgcttcaca 23414866  T
Q  105 ttaatattgt 114  Q
    ||||||||||    
T  23414865 ttaatattgt 23414856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 126 - 207
Target Start/End: Original strand, 23492465 - 23492546
Alignment:
Q  126 agttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttgtttaagttattat 207  Q
    ||||||||||| |||||||||||||||| |||||| | ||||| |||||||||||||||||| |||||||||| ||| ||||    
T  23492465 agttgtcatttatcaatgagttgttaatgaagaaccatgtgaagtattaatatttattaatcgttgttgtttatgttgttat 23492546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 126 - 207
Target Start/End: Original strand, 23498063 - 23498144
Alignment:
Q  126 agttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttgtttaagttattat 207  Q
    ||||||||||| |||||||||||||||| |||||| | ||||| |||||||||||||||||| |||||||||| ||| ||||    
T  23498063 agttgtcatttatcaatgagttgttaatgaagaaccatgtgaagtattaatatttattaatcgttgttgtttatgttgttat 23498144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 114
Target Start/End: Complemental strand, 27556723 - 27556614
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaatttattcatgtttttca 104  Q
    ||||||||| |||| | |||||||||||||||||||||||| |||| || ||||||||||||||||  || |||||||||||| || || ||| ||  ||    
T  27556723 agatgtttacgtgtcgcctatgttgctgttgttggttatgtgaaatatttatatgccttatgtggaagatgtatgatgtttaagttgttgatgcttcaca 27556624  T
Q  105 ttaatattgt 114  Q
    ||||||||||    
T  27556623 ttaatattgt 27556614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 6 - 114
Target Start/End: Complemental strand, 22806012 - 22805904
Alignment:
Q  6 gatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaatttattcatgtttttcat 105  Q
    |||||||| ||| || |||||||||||||||||||||||| |||| || |||| | ||||||||| ||| |||||||||||| || || ||| || ||||    
T  22806012 gatgtttacgtgctgcctatgttgctgttgttggttatgtgaaatatttatattcgttatgtggaaaatgtatgatgtttaagttgttgatgcttctcat 22805913  T
Q  106 taatattgt 114  Q
    |||||||||    
T  22805912 taatattgt 22805904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 123 - 207
Target Start/End: Original strand, 27329100 - 27329184
Alignment:
Q  123 ttaagttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttgtttaagttattat 207  Q
    ||||||||| |||| |||||||||||||||| |||||||| | ||| |||||||||||||||||| |||||||||| ||| ||||    
T  27329100 ttaagttgtaatttatcaatgagttgttaatgaagaactatgcgaagtattaatatttattaatcgttgttgtttatgttgttat 27329184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 123 - 207
Target Start/End: Original strand, 27389840 - 27389924
Alignment:
Q  123 ttaagttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttgtttaagttattat 207  Q
    ||||||||| |||| |||||||||||||||| |||||||| | ||| |||||||||||||||||| |||||||||| ||| ||||    
T  27389840 ttaagttgtaatttatcaatgagttgttaatgaagaactatgcgaagtattaatatttattaatcgttgttgtttatgttgttat 27389924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 22 - 114
Target Start/End: Original strand, 27415996 - 27416088
Alignment:
Q  22 ctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaatttattcatgtttttcattaatattgt 114  Q
    |||||||||||||||||||||||| |||| || |||||||||||||||| ||| |||||||||||| || || ||| ||  ||||||||||||    
T  27415996 ctatgttgctgttgttggttatgtgaaatatttatatgccttatgtggaaaatgtatgatgtttaagttgttgatgcttcacattaatattgt 27416088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 31 - 114
Target Start/End: Complemental strand, 18914000 - 18913917
Alignment:
Q  31 tgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaatttattcatgtttttcattaatattgt 114  Q
    ||||||||||||||| ||||  | |||||||||||||||| ||| |||||||||||| || || ||||||||||||||||||||    
T  18914000 tgttgttggttatgtgaaataattatatgccttatgtggaaaatgtatgatgtttaagttgttgatgtttttcattaatattgt 18913917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 31 - 114
Target Start/End: Complemental strand, 18937258 - 18937175
Alignment:
Q  31 tgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaatttattcatgtttttcattaatattgt 114  Q
    ||||||||||||||| ||||  | |||||||||||||||| ||| |||||||||||| || || ||||||||||||||||||||    
T  18937258 tgttgttggttatgtgaaataattatatgccttatgtggaaaatgtatgatgtttaagttgttgatgtttttcattaatattgt 18937175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 5 - 87
Target Start/End: Complemental strand, 16760280 - 16760198
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaa 87  Q
    ||||||||| |||| | |||||||||||||||||||||||| |||| || ||||| ||||||||||  |||||||||||||||    
T  16760280 agatgtttacgtgtcgcctatgttgctgttgttggttatgtgaaatatttatatgacttatgtggaagatatatgatgtttaa 16760198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 5 - 87
Target Start/End: Original strand, 18955884 - 18955966
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaa 87  Q
    ||||||||| |||| | |||||||||||||||||||||||| |||| || ||||||||||||||||  || ||||||||||||    
T  18955884 agatgtttacgtgtcgcctatgttgctgttgttggttatgtgaaatatttatatgccttatgtggaagatgtatgatgtttaa 18955966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 5 - 87
Target Start/End: Original strand, 31477931 - 31478013
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaa 87  Q
    ||||||||| |||| |||||||||||||||||||||||||| |||| || ||||| ||||||||||  || ||||||||||||    
T  31477931 agatgtttacgtgtcgtctatgttgctgttgttggttatgtgaaatatttatatgacttatgtggaagatgtatgatgtttaa 31478013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 5 - 114
Target Start/End: Complemental strand, 11566847 - 11566738
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaatttattcatgtttttca 104  Q
    ||||||||| |||| | |||||||||||||||||||||||| |||| || ||||||||||||||||  || | |||||||||| || || ||| ||  ||    
T  11566847 agatgtttatgtgtcgcctatgttgctgttgttggttatgtgaaatatttatatgccttatgtggaagatgtttgatgtttaagttgttgatgcttcaca 11566748  T
Q  105 ttaatattgt 114  Q
    ||||||||||    
T  11566747 ttaatattgt 11566738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 5 - 114
Target Start/End: Original strand, 15705483 - 15705592
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaatttattcatgtttttca 104  Q
    |||||||||  |||| ||||||||||||||||||||||||| |||| || ||||| |||||||||| ||| |||||||| ||| ||  | ||| || |||    
T  15705483 agatgtttacttgttttctatgttgctgttgttggttatgtgaaatatttatatgtcttatgtggaaaatgtatgatgtataagttgatgatgcttctca 15705582  T
Q  105 ttaatattgt 114  Q
    ||||||||||    
T  15705583 ttaatattgt 15705592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 22 - 87
Target Start/End: Complemental strand, 18696551 - 18696486
Alignment:
Q  22 ctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaa 87  Q
    |||||||||||||||||||||||| |||| || |||||||||||||||| ||| ||||||||||||    
T  18696551 ctatgttgctgttgttggttatgtgaaatatttatatgccttatgtggaaaatgtatgatgtttaa 18696486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 5 - 114
Target Start/End: Original strand, 18917387 - 18917496
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaatttattcatgtttttca 104  Q
    ||||||||| |||| | |||||||||||||||||||||||| |||| || ||||||||||||||||  || | |||||||||| || || ||| ||  ||    
T  18917387 agatgtttatgtgtcgcctatgttgctgttgttggttatgtgaaatatttatatgccttatgtggaagatgtttgatgtttaagttgttgatgcttcaca 18917486  T
Q  105 ttaatattgt 114  Q
    ||||||||||    
T  18917487 ttaatattgt 18917496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 5 - 114
Target Start/End: Complemental strand, 19870575 - 19870466
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaatttattcatgtttttca 104  Q
    ||||||||| |||| | |||||||||||||||||||||||| |||| || ||||||||||||||||  || | |||||||||| || || ||| ||  ||    
T  19870575 agatgtttatgtgtcgcctatgttgctgttgttggttatgtgaaatatttatatgccttatgtggaagatgtttgatgtttaagttgttgatgcttcaca 19870476  T
Q  105 ttaatattgt 114  Q
    ||||||||||    
T  19870475 ttaatattgt 19870466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 5 - 114
Target Start/End: Complemental strand, 23395053 - 23394944
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaatttattcatgtttttca 104  Q
    ||||||||| |||| | |||||||||||||||||||||||| |||| || ||||||||||||||||  || | |||||||||| || || ||| ||  ||    
T  23395053 agatgtttatgtgtcgcctatgttgctgttgttggttatgtgaaatatttatatgccttatgtggaagatgtttgatgtttaagttgttgatgcttcaca 23394954  T
Q  105 ttaatattgt 114  Q
    ||||||||||    
T  23394953 ttaatattgt 23394944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 123 - 215
Target Start/End: Original strand, 19830147 - 19830239
Alignment:
Q  123 ttaagttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttgtttaagttattatgagatgat 215  Q
    |||||||||||||| ||||||||||| |||||||| ||||  | || |||||||||||||||||| |||||||||| ||  |||| |||||||    
T  19830147 ttaagttgtcatttatcaatgagttgctaataaagtactatttaaagtattaatatttattaatcgttgttgtttatgtggttataagatgat 19830239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 191 - 234
Target Start/End: Original strand, 31630798 - 31630841
Alignment:
Q  191 gttgtttaagttattatgagatgataaatatgtgttgttatatt 234  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  31630798 gttgtttaagttattatgagatgataaatatgtgttgttatatt 31630841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 8 - 114
Target Start/End: Complemental strand, 15875461 - 15875355
Alignment:
Q  8 tgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaatttattcatgtttttcatta 107  Q
    |||||||||| ||  |||||||||| |||||||||||| ||||  | ||||| |||||||||| ||| |||||||||||| || || ||  |||||||||    
T  15875461 tgtttaagtgctgcatatgttgctgatgttggttatgtgaaataattatatgtcttatgtggaaaatgtatgatgtttaagttgttgataattttcatta 15875362  T
Q  108 atattgt 114  Q
    |||||||    
T  15875361 atattgt 15875355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 125 - 207
Target Start/End: Original strand, 23017392 - 23017474
Alignment:
Q  125 aagttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttgtttaagttattat 207  Q
    ||||||| |||| |||| ||||||||||| |||||||| |||||  ||||||||||||||||| |||||||||| ||| ||||    
T  23017392 aagttgtaatttatcaacgagttgttaatgaagaactatgtgaagaattaatatttattaatcgttgttgtttatgttgttat 23017474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 5 - 114
Target Start/End: Complemental strand, 8243846 - 8243737
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaatttattcatgtttttca 104  Q
    ||||||||| ||||   |||||||||||||||||||||||| |||| || ||||||||||||||||  || | |||||||||| || || ||| ||  ||    
T  8243846 agatgtttatgtgtcacctatgttgctgttgttggttatgtgaaatatttatatgccttatgtggaagatgtttgatgtttaagttgttgatgcttcaca 8243747  T
Q  105 ttaatattgt 114  Q
    ||||||||||    
T  8243746 ttaatattgt 8243737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 5 - 70
Target Start/End: Complemental strand, 14472256 - 14472191
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtgga 70  Q
    ||||||||| |||| | |||||||||||||||||||||||| |||| || ||||||||||||||||    
T  14472256 agatgtttatgtgtcgcctatgttgctgttgttggttatgtgaaatatttatatgccttatgtgga 14472191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 5 - 114
Target Start/End: Original strand, 15817561 - 15817670
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaatttattcatgtttttca 104  Q
    ||||||||| ||| ||  ||||||| ||||||||||||||| ||||  | ||||| |||||||||| ||| |||||||||||| |  || ||| ||||||    
T  15817561 agatgtttacgtgctgcatatgttgttgttgttggttatgtgaaataattatatgtcttatgtggaaaatgtatgatgtttaagtagttgatgcttttca 15817660  T
Q  105 ttaatattgt 114  Q
    ||||||||||    
T  15817661 ttaatattgt 15817670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 22 - 87
Target Start/End: Complemental strand, 18706369 - 18706304
Alignment:
Q  22 ctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaa 87  Q
    ||||||||||||| |||||||||| |||| || |||||||||||||||| ||| ||||||||||||    
T  18706369 ctatgttgctgtttttggttatgtgaaatatttatatgccttatgtggaaaatgtatgatgtttaa 18706304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 5 - 114
Target Start/End: Complemental strand, 22862931 - 22862822
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaatttattcatgtttttca 104  Q
    ||||||||| |||| | |||||||| ||||||||||||||| |||| || ||||||||||||||||  || | |||||||||| || || ||| ||  ||    
T  22862931 agatgtttatgtgtcgcctatgttgttgttgttggttatgtgaaatatttatatgccttatgtggaagatgtttgatgtttaagttgttgatgcttcaca 22862832  T
Q  105 ttaatattgt 114  Q
    ||||||||||    
T  22862831 ttaatattgt 22862822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 5 - 114
Target Start/End: Complemental strand, 23989905 - 23989796
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaatttattcatgtttttca 104  Q
    ||||||||| |||| | ||||||||||||||||||||| || |||| || ||||||||||||||||  || | |||||||||| || || ||| ||  ||    
T  23989905 agatgtttatgtgtcgcctatgttgctgttgttggttaggtgaaatatttatatgccttatgtggaagatgtttgatgtttaagttgttgatgcttcaca 23989806  T
Q  105 ttaatattgt 114  Q
    ||||||||||    
T  23989805 ttaatattgt 23989796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 189 - 234
Target Start/End: Original strand, 31630854 - 31630899
Alignment:
Q  189 ttgttgtttaagttattatgagatgataaatatgtgttgttatatt 234  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||    
T  31630854 ttgttgtttaagttattatgagatgatgaatatgtgttgttatatt 31630899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 31 - 114
Target Start/End: Original strand, 15174163 - 15174246
Alignment:
Q  31 tgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaatttattcatgtttttcattaatattgt 114  Q
    ||||||||||||||| ||||  | ||||| |||||||||| ||| |||||||||||| || || ||| ||||||||||||||||    
T  15174163 tgttgttggttatgtgaaataattatatgacttatgtggaaaatgtatgatgtttaagttgttgatgcttttcattaatattgt 15174246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 124 - 195
Target Start/End: Complemental strand, 27850731 - 27850660
Alignment:
Q  124 taagttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttgt 195  Q
    ||||||| |||||||||||||||| ||||| ||||| || ||| | |||||||||||||||||| |||||||    
T  27850731 taagttgccatttgtcaatgagttattaatgaagaattatgtggagtattaatatttattaatcgttgttgt 27850660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 87
Target Start/End: Complemental strand, 1644693 - 1644611
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaa 87  Q
    ||||||||| |||| | |||||||||||||||||||||||| ||||  | ||||||||||||||||  || | ||||||||||    
T  1644693 agatgtttatgtgtcgcctatgttgctgttgttggttatgtgaaatacttatatgccttatgtggaagatgtttgatgtttaa 1644611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 5 - 87
Target Start/End: Complemental strand, 22949093 - 22949011
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaa 87  Q
    ||||||||| |||| | |||||||| ||||||||||||||| |||| || ||||  ||||||||||  || ||||||||||||    
T  22949093 agatgtttacgtgtcgcctatgttgttgttgttggttatgtgaaatatttatataacttatgtggaagatgtatgatgtttaa 22949011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 5 - 87
Target Start/End: Complemental strand, 22953049 - 22952967
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaa 87  Q
    ||||||||| |||| | |||||||| ||||||||||||||| |||| || ||||  ||||||||||  || ||||||||||||    
T  22953049 agatgtttacgtgtcgcctatgttgttgttgttggttatgtgaaatatttatataacttatgtggaagatgtatgatgtttaa 22952967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 5 - 87
Target Start/End: Complemental strand, 23871537 - 23871455
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaa 87  Q
    ||||||||| |||| | |||||||| ||||||||||||||| |||| || ||||  ||||||||||  || ||||||||||||    
T  23871537 agatgtttacgtgtcgcctatgttgttgttgttggttatgtgaaatatttatataacttatgtggaagatgtatgatgtttaa 23871455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 5 - 87
Target Start/End: Complemental strand, 23875493 - 23875411
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaa 87  Q
    ||||||||| |||| | |||||||| ||||||||||||||| |||| || ||||  ||||||||||  || ||||||||||||    
T  23875493 agatgtttacgtgtcgcctatgttgttgttgttggttatgtgaaatatttatataacttatgtggaagatgtatgatgtttaa 23875411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 123 - 176
Target Start/End: Complemental strand, 28947328 - 28947275
Alignment:
Q  123 ttaagttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaat 176  Q
    ||||||||||| || |||||||||||||||| |||||||| ||||| |||||||    
T  28947328 ttaagttgtcaattatcaatgagttgttaatgaagaactatgtgaagtattaat 28947275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 189 - 229
Target Start/End: Complemental strand, 15874894 - 15874854
Alignment:
Q  189 ttgttgtttaagttattatgagatgataaatatgtgttgtt 229  Q
    ||||||||||  |||||||||||||||||||||||||||||    
T  15874894 ttgttgtttatattattatgagatgataaatatgtgttgtt 15874854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 179
Target Start/End: Original strand, 18458314 - 18458370
Alignment:
Q  123 ttaagttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatt 179  Q
    |||||||||||||| ||||| ||| |||||| |||||||| ||||| ||||||||||    
T  18458314 ttaagttgtcatttatcaataagtagttaatgaagaactatgtgaagtattaatatt 18458370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 87
Target Start/End: Complemental strand, 23956206 - 23956150
Alignment:
Q  31 tgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaa 87  Q
    ||||||||||||||| ||||    |||||||||||||||| ||| ||||||||||||    
T  23956206 tgttgttggttatgtgaaataactatatgccttatgtggaaaatgtatgatgtttaa 23956150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 69; Significance: 4e-31; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 126 - 198
Target Start/End: Complemental strand, 71621 - 71549
Alignment:
Q  126 agttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttgttta 198  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  71621 agttgtcatttgtcaatgagttgttaataaagaactaagtgaagtattaatatttattaatcattgttgttta 71549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0170 (Bit Score: 67; Significance: 7e-30; HSPs: 1)
Name: scaffold0170
Description:

Target: scaffold0170; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 123 - 213
Target Start/End: Complemental strand, 2379 - 2289
Alignment:
Q  123 ttaagttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttgtttaagttattatgagatg 213  Q
    ||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||| |||||||||| ||  ||||||||||    
T  2379 ttaagttgtcatttgtcaaagagttgttaataaagaactaagtgaagtattaatatttattaatcgttgttgtttatgtcgttatgagatg 2289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 67; Significance: 7e-30; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 125 - 215
Target Start/End: Complemental strand, 13928 - 13838
Alignment:
Q  125 aagttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttgtttaagttattatgagatgat 215  Q
    ||||||||| ||||||||||||| |||||||||||||||||||| |||||||||||||||||| |||||||||| || |||||||||||||    
T  13928 aagttgtcaattgtcaatgagttattaataaagaactaagtgaagtattaatatttattaatcgttgttgtttatgtcattatgagatgat 13838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 123 - 212
Target Start/End: Original strand, 11067 - 11156
Alignment:
Q  123 ttaagttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttgtttaagttattatgagat 212  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||| |||||||||| ||| |||| ||||    
T  11067 ttaagttgtcatttgtcactgagttgttaataaagaactaagtgaagtattaatatttattaatcgttgttgtttatgtttttataagat 11156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0810 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0810
Description:

Target: scaffold0810; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 126 - 198
Target Start/End: Complemental strand, 2626 - 2554
Alignment:
Q  126 agttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttgttta 198  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||    
T  2626 agttgtcatttgtcaatgagttgttaataaagaactaagtgaaatgttagtatttattaatcattgttgttta 2554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0507 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0507
Description:

Target: scaffold0507; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 123 - 215
Target Start/End: Original strand, 3159 - 3251
Alignment:
Q  123 ttaagttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttgtttaagttattatgagatgat 215  Q
    ||||||||| | |||||||||||||||||||||||||||||||||| |||||| ||||||||||| | |||||||| ||||||||||||||||    
T  3159 ttaagttgtaaattgtcaatgagttgttaataaagaactaagtgaagtattaacatttattaatcgtggttgtttatgttattatgagatgat 3251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 65; Significance: 1e-28; HSPs: 2)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 123 - 215
Target Start/End: Complemental strand, 15577 - 15485
Alignment:
Q  123 ttaagttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttgtttaagttattatgagatgat 215  Q
    ||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||  |||||||||| ||  ||||||||||||    
T  15577 ttaagttgtcatttgtcaatgagttgttaataacgaactaagtgaagtattaatatttattaattgttgttgtttatgtcgttatgagatgat 15485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220; HSP #2
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 123 - 212
Target Start/End: Complemental strand, 3312 - 3223
Alignment:
Q  123 ttaagttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttgtttaagttattatgagat 212  Q
    ||||||||||||||||||||||||| ||||||||||||||||| || |||||||||||||||||| |||||||||| ||  |||||||||    
T  3312 ttaagttgtcatttgtcaatgagtttttaataaagaactaagtaaagtattaatatttattaatcgttgttgtttatgtccttatgagat 3223  T

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Target: scaffold0022 (Bit Score: 65; Significance: 1e-28; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 126 - 194
Target Start/End: Complemental strand, 116112 - 116044
Alignment:
Q  126 agttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttg 194  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  116112 agttgtcatttgtcaatgagttgttaataaagaactaagtgaagtattaatatttattaatcattgttg 116044  T

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Target: scaffold0022; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 5 - 114
Target Start/End: Original strand, 53878 - 53987
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaatttattcatgtttttca 104  Q
    ||||||||| ||| || |||||||||||||||||||||||| |||| || |||||| ||||||||| ||| |||||||||||| || || ||| | ||||    
T  53878 agatgtttacgtgctgcctatgttgctgttgttggttatgtgaaatatttatatgcgttatgtggaaaatgtatgatgtttaagttgttgatgctcttca 53977  T
Q  105 ttaatattgt 114  Q
    ||||||||||    
T  53978 ttaatattgt 53987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108 (Bit Score: 62; Significance: 7e-27; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 110 - 215
Target Start/End: Complemental strand, 5241 - 5136
Alignment:
Q  110 attgtcattatatttaagttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttgtttaagttattatga 209  Q
    ||||||||| |  |||||||||| ||||||||||||||||||||||| |||||| |||| ||||||||||||||||||  ||||||||| || |||||||    
T  5241 attgtcattgtcgttaagttgtcctttgtcaatgagttgttaataaataactaactgaagtattaatatttattaatcgatgttgtttatgtcattatga 5142  T
Q  210 gatgat 215  Q
    ||||||    
T  5141 gatgat 5136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 123 - 215
Target Start/End: Original strand, 9278 - 9370
Alignment:
Q  123 ttaagttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttgtttaagttattatgagatgat 215  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||| |||| | ||| ||| |||| |||||||    
T  9278 ttaagttgtcatttgtcactgagttgttaataaagaactaagtgaagtattaatatttattaatcgttgtcgattatgttgttataagatgat 9370  T

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Target: scaffold0098 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 123 - 215
Target Start/End: Complemental strand, 38970 - 38878
Alignment:
Q  123 ttaagttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttgtttaagttattatgagatgat 215  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||| |||||| ||  ||  ||||||||||||    
T  38970 ttaagttgtcatttgtcaatgagctgttaataaagaactaagtgaagtattaatatttattaatcgttgttgattgtgtcgttatgagatgat 38878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0780 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0780
Description:

Target: scaffold0780; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 3 - 114
Target Start/End: Original strand, 3365 - 3476
Alignment:
Q  3 taagatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaatttattcatgttttt 102  Q
    |||||| |||||||| || |||||||||||||||||||||||| |||| || |||||  ||||||||| ||| |||||||||||| || || ||||||||    
T  3365 taagatatttaagtgctgcctatgttgctgttgttggttatgtgaaatatttatatgaattatgtggaaaatgtatgatgtttaagttgttgatgttttt 3464  T
Q  103 cattaatattgt 114  Q
    ||||||||||||    
T  3465 cattaatattgt 3476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0877 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0877
Description:

Target: scaffold0877; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 5 - 114
Target Start/End: Original strand, 2753 - 2862
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaatttattcatgtttttca 104  Q
    ||||||||| ||| || |||||||||||||||||||||||| |||| || |||||||||||||||| ||| |||||||||||| || ||  || ||||||    
T  2753 agatgtttacgtgctgcctatgttgctgttgttggttatgtgaaatatttatatgccttatgtggaaaatgtatgatgtttaagttgttggtgcttttca 2852  T
Q  105 ttaatattgt 114  Q
    ||||||||||    
T  2853 ttaatattgt 2862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0434 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0434
Description:

Target: scaffold0434; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 5 - 114
Target Start/End: Original strand, 6981 - 7090
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaatttattcatgtttttca 104  Q
    ||||||||| ||| || |||||||||||||||||||||||| |||| |  |||||||||||||||| ||| |||||||||||| || || ||| ||||||    
T  6981 agatgtttacgtgctgactatgttgctgttgttggttatgtgaaatatgtatatgccttatgtggaaaatgtatgatgtttaagttgttgatgcttttca 7080  T
Q  105 ttaatattgt 114  Q
    ||||||||||    
T  7081 ttaatattgt 7090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 8 - 81
Target Start/End: Original strand, 36073 - 36146
Alignment:
Q  8 tgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgat 81  Q
    |||||||||| ||  ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  36073 tgtttaagtgctgcatatgttgctgttgttggttatgtgaaatgttcatatgccttatgtggagaatatatgat 36146  T

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Target: scaffold0020 (Bit Score: 58; Significance: 2e-24; HSPs: 2)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 5 - 114
Target Start/End: Original strand, 169789 - 169898
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaatttattcatgtttttca 104  Q
    ||||||||| ||| || |||||||||||||||||||||||| |||| || |||||||||||||||| ||| |||||||||||| || || ||| | ||||    
T  169789 agatgtttacgtgctgcctatgttgctgttgttggttatgtgaaatatttatatgccttatgtggaaaatgtatgatgtttaagttgttgatgctcttca 169888  T
Q  105 ttaatattgt 114  Q
    ||||||||||    
T  169889 ttaatattgt 169898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 123 - 198
Target Start/End: Complemental strand, 142329 - 142254
Alignment:
Q  123 ttaagttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttgttta 198  Q
    ||||||||||||||||||||||||| ||||| |||||||| ||||| |||||||||||||||||| |||| |||||    
T  142329 ttaagttgtcatttgtcaatgagttattaatgaagaactatgtgaagtattaatatttattaatcgttgtcgttta 142254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 5 - 114
Target Start/End: Complemental strand, 126036 - 125927
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaatttattcatgtttttca 104  Q
    ||||||||| ||| || |||||||||||||||||||||||| |||| || |||||||||||||||| ||| |||||||||||| || || ||| || |||    
T  126036 agatgtttacgtgctgcctatgttgctgttgttggttatgtgaaatatttatatgccttatgtggaaaatgtatgatgtttaagttgttgatgcttctca 125937  T
Q  105 ttaatattgt 114  Q
    ||||||||||    
T  125936 ttaatattgt 125927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0462 (Bit Score: 57; Significance: 6e-24; HSPs: 3)
Name: scaffold0462
Description:

Target: scaffold0462; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 123 - 207
Target Start/End: Complemental strand, 5769 - 5685
Alignment:
Q  123 ttaagttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttgtttaagttattat 207  Q
    |||||||||||||| |||||||||||||||| |||||||| ||||| |||||||||||||||||| |||||||||| ||| ||||    
T  5769 ttaagttgtcatttatcaatgagttgttaatgaagaactatgtgaagtattaatatttattaatcgttgttgtttatgttgttat 5685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0462; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 123 - 207
Target Start/End: Complemental strand, 263 - 179
Alignment:
Q  123 ttaagttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttgtttaagttattat 207  Q
    ||||||||| |||| |||||||||||||||| |||||||| ||||| |||||||||||||||||| |||||||||| ||| ||||    
T  263 ttaagttgtaatttatcaatgagttgttaatgaagaactatgtgaagtattaatatttattaatcgttgttgtttatgttgttat 179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0462; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 31 - 114
Target Start/End: Complemental strand, 10564 - 10482
Alignment:
Q  31 tgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaatttattcatgtttttcattaatattgt 114  Q
    ||||||||||||||| ||||  | |||||||||||||||| ||| ||||||||||| ||| || ||| ||||||||||||||||    
T  10564 tgttgttggttatgtgaaataattatatgccttatgtggaaaatgtatgatgtttagttt-ttgatgcttttcattaatattgt 10482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 57; Significance: 6e-24; HSPs: 3)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 123 - 207
Target Start/End: Original strand, 65286 - 65370
Alignment:
Q  123 ttaagttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttgtttaagttattat 207  Q
    |||||||||||||| |||||||||||||||| |||||||| ||||| |||||||||||||||||||||||| |||| ||| ||||    
T  65286 ttaagttgtcatttatcaatgagttgttaatgaagaactatgtgaagtattaatatttattaatcattgttttttatgttgttat 65370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 5 - 114
Target Start/End: Complemental strand, 31204 - 31095
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaatttattcatgtttttca 104  Q
    ||||||||| |||| | |||||||||||||||| ||||||| |||| || ||||||||||||||||  || |||||||||||| || || ||| ||  ||    
T  31204 agatgtttacgtgtcgcctatgttgctgttgttagttatgtgaaatatttatatgccttatgtggaagatgtatgatgtttaagttgttgatgcttcaca 31105  T
Q  105 ttaatattgt 114  Q
    ||||||||||    
T  31104 ttaatattgt 31095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 170 - 207
Target Start/End: Original strand, 79549 - 79586
Alignment:
Q  170 tattaatatttattaatcattgttgtttaagttattat 207  Q
    ||||||||||||||||||||||||||||| ||| ||||    
T  79549 tattaatatttattaatcattgttgtttatgttgttat 79586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0290 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0290
Description:

Target: scaffold0290; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 7 - 114
Target Start/End: Complemental strand, 238 - 131
Alignment:
Q  7 atgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaatttattcatgtttttcatt 106  Q
    ||||||| |||||| |||||||||||||||||||||||| |||| || |||||||||| ||||| ||| |||||||||||| || ||  || ||||||||    
T  238 atgtttacgtgttgcctatgttgctgttgttggttatgtgaaatatttatatgccttaggtggaaaatgtatgatgtttaagttgttggtgcttttcatt 139  T
Q  107 aatattgt 114  Q
    ||||||||    
T  138 aatattgt 131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 56; Significance: 3e-23; HSPs: 2)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 5 - 112
Target Start/End: Complemental strand, 120089 - 119982
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaatttattcatgtttttca 104  Q
    ||||||||| |||||| |||||||||||||||||||||||| |||| || |||||||||||||| | ||| |||||||||||| || || ||| || |||    
T  120089 agatgtttacgtgttgcctatgttgctgttgttggttatgtgaaatatttatatgccttatgtgaaaaatgtatgatgtttaagttgttgatgcttctca 119990  T
Q  105 ttaatatt 112  Q
    ||||||||    
T  119989 ttaatatt 119982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 175
Target Start/End: Complemental strand, 56524 - 56472
Alignment:
Q  123 ttaagttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaa 175  Q
    ||||||||| |||| |||||||||||||||| |||||||| | ||| ||||||    
T  56524 ttaagttgtaatttatcaatgagttgttaatgaagaactatgagaattattaa 56472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1783 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold1783
Description:

Target: scaffold1783; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 5 - 114
Target Start/End: Complemental strand, 498 - 389
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaatttattcatgtttttca 104  Q
    ||||||||| ||| |  |||||||| ||||||||||||||| ||||  | |||||||||||||||| |||||||||||||||| || || ||| ||||||    
T  498 agatgtttacgtgctccctatgttgttgttgttggttatgtgaaataattatatgccttatgtggaaaatatatgatgtttaagttgttgatgcttttca 399  T
Q  105 ttaatattgt 114  Q
    ||||||||||    
T  398 ttaatattgt 389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0737 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0737
Description:

Target: scaffold0737; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 110 - 207
Target Start/End: Original strand, 6910 - 7007
Alignment:
Q  110 attgtcattatatttaagttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttgtttaagttattat 207  Q
    |||||| ||||  ||||||||| |||| ||||||| |||||||| |||||||| ||||| ||||||||||||||||||||||||||||| ||| ||||    
T  6910 attgtcgttatcgttaagttgtaatttatcaatgacttgttaatgaagaactatgtgaagtattaatatttattaatcattgttgtttatgttgttat 7007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0513 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0513
Description:

Target: scaffold0513; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 8 - 81
Target Start/End: Original strand, 10894 - 10967
Alignment:
Q  8 tgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgat 81  Q
    |||||||||||||  ||| ||||||||||||||||||| |||||||||||||| ||||||||||||||||||||    
T  10894 tgtttaagtgttgcttatattgctgttgttggttatgtgaaatgttcatatgcattatgtggagaatatatgat 10967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0484 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0484
Description:

Target: scaffold0484; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 5 - 114
Target Start/End: Complemental strand, 933 - 824
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaatttattcatgtttttca 104  Q
    ||||||||| ||| ||||||||||||||||||||||||||| |||| || ||||||||||||||||  || |||||||||||| || || ||| ||  ||    
T  933 agatgtttatgtgctgtctatgttgctgttgttggttatgtgaaatatttatatgccttatgtggaagatgtatgatgtttaagttgttgatgcttcaca 834  T
Q  105 ttaatattgt 114  Q
    ||||||||||    
T  833 ttaatattgt 824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 5 - 114
Target Start/End: Complemental strand, 21247 - 21138
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaatttattcatgtttttca 104  Q
    ||||||||| ||| || |||||||||||||||||||||||| |||| || |||||||||||||||| ||| |||||||||||| || || ||| || |||    
T  21247 agatgtttatgtgctgcctatgttgctgttgttggttatgtgaaatatttatatgccttatgtggaaaatgtatgatgtttaagttgttgatgcttctca 21148  T
Q  105 ttaatattgt 114  Q
     |||||||||    
T  21147 gtaatattgt 21138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 54; Significance: 4e-22; HSPs: 2)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 110 - 207
Target Start/End: Original strand, 47711 - 47808
Alignment:
Q  110 attgtcattatatttaagttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttgtttaagttattat 207  Q
    ||||||||| |  |||||||||||||| |||||||||||||||| || ||||| ||||| |||||||||||||||||| |||||||||| ||| ||||    
T  47711 attgtcattgttgttaagttgtcatttatcaatgagttgttaatgaaaaactatgtgaagtattaatatttattaatcgttgttgtttatgttgttat 47808  T

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Target: scaffold0042; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 153
Target Start/End: Complemental strand, 28131 - 28101
Alignment:
Q  123 ttaagttgtcatttgtcaatgagttgttaat 153  Q
    |||||||||||||||||||||||||||||||    
T  28131 ttaagttgtcatttgtcaatgagttgttaat 28101  T

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Target: scaffold0529 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0529
Description:

Target: scaffold0529; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 123 - 207
Target Start/End: Complemental strand, 7163 - 7079
Alignment:
Q  123 ttaagttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttgtttaagttattat 207  Q
    |||||||||||||| ||||||||||||||| ||||||||| ||||| | |||||||||||||||| |||||||||| ||| ||||    
T  7163 ttaagttgtcatttatcaatgagttgttaacaaagaactatgtgaagttttaatatttattaatcgttgttgtttatgttgttat 7079  T

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Target: scaffold0036 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 123 - 207
Target Start/End: Original strand, 78587 - 78671
Alignment:
Q  123 ttaagttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttgtttaagttattat 207  Q
    |||||||||||||| |||||||||| ||||| |||||||| ||||| |||||||||||||||||| |||||||||| ||| ||||    
T  78587 ttaagttgtcatttatcaatgagttattaatgaagaactacgtgaagtattaatatttattaatcgttgttgtttatgttgttat 78671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 53; Significance: 2e-21; HSPs: 3)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 123 - 207
Target Start/End: Complemental strand, 31684 - 31600
Alignment:
Q  123 ttaagttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttgtttaagttattat 207  Q
    ||||||||| |||| |||||||||||||||| |||||||| ||||| |||||||||||||||||| |||||||||| ||| ||||    
T  31684 ttaagttgtaatttatcaatgagttgttaatgaagaactatgtgaagtattaatatttattaatcgttgttgtttatgttgttat 31600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 123 - 207
Target Start/End: Complemental strand, 36991 - 36907
Alignment:
Q  123 ttaagttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttgtttaagttattat 207  Q
    ||||||||| |||| |||||||||||||||| |||||||| ||||| |||||||||||||||||| |||||||||| ||| ||||    
T  36991 ttaagttgtaatttatcaatgagttgttaatgaagaactatgtgaagtattaatatttattaatcgttgttgtttatgttgttat 36907  T

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Target: scaffold0001; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 87
Target Start/End: Complemental strand, 176136 - 176080
Alignment:
Q  31 tgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaa 87  Q
    ||||||||||||||| ||||    |||||||||||||||| ||| ||||||||||||    
T  176136 tgttgttggttatgtgaaataactatatgccttatgtggaaaatgtatgatgtttaa 176080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0195 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0195
Description:

Target: scaffold0195; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 123 - 198
Target Start/End: Complemental strand, 17039 - 16964
Alignment:
Q  123 ttaagttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttgttta 198  Q
    ||||||||| ||||||||||||||| ||||| |||||||| ||||| |||||||||||||||||| ||||||||||    
T  17039 ttaagttgttatttgtcaatgagttattaatgaagaactatgtgaagtattaatatttattaatcgttgttgttta 16964  T

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Target: scaffold0017 (Bit Score: 52; Significance: 6e-21; HSPs: 2)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 27 - 114
Target Start/End: Original strand, 1227 - 1314
Alignment:
Q  27 ttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaatttattcatgtttttcattaatattgt 114  Q
    ||||||||||||||||||| |||| || |||||||||||||||| ||| |||||||||||| || || ||| ||||||||||||||||    
T  1227 ttgctgttgttggttatgtgaaatatttatatgccttatgtggaaaatgtatgatgtttaaattgttgatgcttttcattaatattgt 1314  T

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Target: scaffold0017; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 27 - 114
Target Start/End: Original strand, 7978 - 8065
Alignment:
Q  27 ttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaatttattcatgtttttcattaatattgt 114  Q
    ||||||||||||||||||| |||| || |||||||||||||||| ||| |||||||||||| || || ||| ||||||||||||||||    
T  7978 ttgctgttgttggttatgtgaaatatttatatgccttatgtggaaaatgtatgatgtttaaattgttgatgcttttcattaatattgt 8065  T

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Target: scaffold0241 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0241
Description:

Target: scaffold0241; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 122 - 207
Target Start/End: Complemental strand, 1223 - 1138
Alignment:
Q  122 tttaagttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttgtttaagttattat 207  Q
    ||||||||||||||| |||||||||||||||   | ||||| |||||||||||||||||||||||| |||||||||| ||| ||||    
T  1223 tttaagttgtcatttatcaatgagttgttaacgtataactatgtgaaatattaatatttattaatcgttgttgtttatgttgttat 1138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 114
Target Start/End: Complemental strand, 39333 - 39224
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaatttattcatgtttttca 104  Q
    ||||||||| |||| | |||||||||||||||||||||||| |||| || ||||||||||||||||  || |||||||||||| || || ||| ||  ||    
T  39333 agatgtttacgtgtcgcctatgttgctgttgttggttatgtgaaatatttatatgccttatgtggaagatgtatgatgtttaagttgttgatgcttcaca 39234  T
Q  105 ttaatattgt 114  Q
    ||||||||||    
T  39233 ttaatattgt 39224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 50; Significance: 1e-19; HSPs: 4)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 114
Target Start/End: Original strand, 10124 - 10233
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaatttattcatgtttttca 104  Q
    ||||||||| ||| || ||||||| ||| | |||||||||| ||||||| |||||||||||||||| ||| |||||||||||| || || ||| ||||||    
T  10124 agatgtttacgtgctgcctatgtttctgctattggttatgtgaaatgtttatatgccttatgtggaaaatgtatgatgtttaagttgttgatgcttttca 10223  T
Q  105 ttaatattgt 114  Q
    ||||| ||||    
T  10224 ttaattttgt 10233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 123 - 206
Target Start/End: Original strand, 10804 - 10887
Alignment:
Q  123 ttaagttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttgtttaagttatta 206  Q
    ||||||||||| ||||||||||||| ||||| |||||||| ||||  |||||||||||||||||| |||| ||||| |||||||    
T  10804 ttaagttgtcagttgtcaatgagttattaatgaagaactatgtgatttattaatatttattaatcgttgtggtttatgttatta 10887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 123 - 206
Target Start/End: Original strand, 16607 - 16690
Alignment:
Q  123 ttaagttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttgtttaagttatta 206  Q
    ||||||||||| ||||||||||||| ||||| |||||||| ||||  |||||||||||||||||| |||| ||||| |||||||    
T  16607 ttaagttgtcagttgtcaatgagttattaatgaagaactatgtgatttattaatatttattaatcgttgtggtttatgttatta 16690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 22 - 87
Target Start/End: Original strand, 15471 - 15536
Alignment:
Q  22 ctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaa 87  Q
    |||||||| ||||||||||||||| |||| || |||||||||||||||| ||| ||||||||||||    
T  15471 ctatgttgatgttgttggttatgtgaaatatttatatgccttatgtggaaaatgtatgatgtttaa 15536  T

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Target: scaffold0450 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0450
Description:

Target: scaffold0450; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 123 - 207
Target Start/End: Complemental strand, 13500 - 13416
Alignment:
Q  123 ttaagttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttgtttaagttattat 207  Q
    ||||||||| |||| |||||||||||||||| |||||||| | ||| |||||||||||||||||| |||||||||| ||| ||||    
T  13500 ttaagttgtaatttatcaatgagttgttaatgaagaactatgcgaagtattaatatttattaatcgttgttgtttatgttgttat 13416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 123 - 207
Target Start/End: Original strand, 19844 - 19928
Alignment:
Q  123 ttaagttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttgtttaagttattat 207  Q
    |||||||||||||| |||||||||||||||  |||||||| | ||| |||||||||||||||||| |||||||||| ||| ||||    
T  19844 ttaagttgtcatttatcaatgagttgttaacgaagaactatgagaagtattaatatttattaatcgttgttgtttatgttgttat 19928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 18 - 114
Target Start/End: Complemental strand, 605 - 509
Alignment:
Q  18 ttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaatttattcatgtttttcattaatattgt 114  Q
    |||||||||||| ||||||||||||||| |||| || |||||||||||||| | ||| || ||||||||| || || ||| ||||||||||||||||    
T  605 ttgtctatgttgttgttgttggttatgtgaaatatttatatgccttatgtgaaaaatgtacgatgtttaagttgttgatgcttttcattaatattgt 509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 123 - 207
Target Start/End: Original strand, 66264 - 66347
Alignment:
Q  123 ttaagttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttgtttaagttattat 207  Q
    |||||||||||||| |||||||||||||||| |||||||| |||||||||||||| ||||||||  |||||||||| ||| ||||    
T  66264 ttaagttgtcatttatcaatgagttgttaatgaagaactatgtgaaatattaata-ttattaattgttgttgtttatgttgttat 66347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 22 - 114
Target Start/End: Complemental strand, 71365 - 71273
Alignment:
Q  22 ctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaatttattcatgtttttcattaatattgt 114  Q
    |||||||||||||||||||||||| |||| || |||||||||||||||| ||| |||||||||||| || || ||| ||  ||||||||||||    
T  71365 ctatgttgctgttgttggttatgtgaaatatttatatgccttatgtggaaaatgtatgatgtttaagttgttgatgcttcacattaatattgt 71273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0747 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0747
Description:

Target: scaffold0747; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 5 - 112
Target Start/End: Complemental strand, 640 - 533
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaatttattcatgtttttca 104  Q
    ||||||||| ||| | ||||||||| ||||||||||||||| |||| || |||||| ||||||||| ||| |||||||||||| || || ||| | ||||    
T  640 agatgtttacgtgctttctatgttgttgttgttggttatgtgaaatatttatatgcgttatgtggaaaatgtatgatgtttaagttgttgatgctcttca 541  T
Q  105 ttaatatt 112  Q
    ||||||||    
T  540 ttaatatt 533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 7 - 114
Target Start/End: Original strand, 24639 - 24745
Alignment:
Q  7 atgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaatttattcatgtttttcatt 106  Q
    |||||||||||||| |||||||| ||||| ||||||||| |||| || ||||||||||| |||| ||| |||||||||||| || || |||  |||||||    
T  24639 atgtttaagtgttgcctatgttgatgttgatggttatgtgaaatatttatatgccttatctggaaaatgtatgatgtttaagttgttgatg-ctttcatt 24737  T
Q  107 aatattgt 114  Q
    ||||||||    
T  24738 aatattgt 24745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0575 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0575
Description:

Target: scaffold0575; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 5 - 87
Target Start/End: Original strand, 6199 - 6281
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaa 87  Q
    ||||||||| ||| || |||||||||||||||||||||||| |||| || ||||| |||||||||| |||||| |||||||||    
T  6199 agatgtttatgtgctgcctatgttgctgttgttggttatgtgaaatatttatatggcttatgtggaaaatatacgatgtttaa 6281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0200 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0200
Description:

Target: scaffold0200; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 5 - 87
Target Start/End: Complemental strand, 17654 - 17572
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaa 87  Q
    ||||||||| |||| | |||||||||||||||||||||||| |||| || ||||||||||||||||  || ||||||||||||    
T  17654 agatgtttacgtgtcgcctatgttgctgttgttggttatgtgaaatatttatatgccttatgtggaagatgtatgatgtttaa 17572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0676 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0676
Description:

Target: scaffold0676; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 5 - 114
Target Start/End: Complemental strand, 435 - 326
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaatttattcatgtttttca 104  Q
    ||||||||| |||| | |||||||||||||||||||||||| |||| || |||||||||||||| |  || | |||||||||| ||||| ||| ||  ||    
T  435 agatgtttatgtgtcgcctatgttgctgttgttggttatgtgaaatatttatatgccttatgtgaaagatgtttgatgtttaagttattgatgcttcaca 336  T
Q  105 ttaatattgt 114  Q
    ||||||||||    
T  335 ttaatattgt 326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0317 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0317
Description:

Target: scaffold0317; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 5 - 110
Target Start/End: Original strand, 6942 - 7047
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaatttattcatgtttttca 104  Q
    ||||||||| ||| || ||||||| |||||||||||||||| |||| || |||||| ||||||||| ||| |||||||||||| || || ||| | ||||    
T  6942 agatgtttacgtgctgcctatgttactgttgttggttatgtgaaatttttatatgcgttatgtggaaaatgtatgatgtttaagttgttgatgctcttca 7041  T
Q  105 ttaata 110  Q
    ||||||    
T  7042 ttaata 7047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0278 (Bit Score: 46; Significance: 2e-17; HSPs: 2)
Name: scaffold0278
Description:

Target: scaffold0278; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 189 - 234
Target Start/End: Complemental strand, 7121 - 7076
Alignment:
Q  189 ttgttgtttaagttattatgagatgataaatatgtgttgttatatt 234  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  7121 ttgttgtttaagttattatgagatgataaatatgtgttgttatatt 7076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0278; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 5 - 80
Target Start/End: Complemental strand, 7915 - 7840
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatga 80  Q
    ||||||||| |||||| |||||||| ||||||||||||||| |||| || |||||||||||||||| ||| |||||    
T  7915 agatgtttatgtgttgcctatgttgttgttgttggttatgtgaaatatttatatgccttatgtggaaaatgtatga 7840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 5 - 114
Target Start/End: Original strand, 1914 - 2023
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaatttattcatgtttttca 104  Q
    ||||||||| ||| || || |||||||||| |||||||||| |||| || ||||| |||||||||| ||| |||||||||||| || || ||  ||||||    
T  1914 agatgtttacgtgctgcctttgttgctgttattggttatgtgaaatatttatatgtcttatgtggaaaatgtatgatgtttaagttgttgatacttttca 2013  T
Q  105 ttaatattgt 114  Q
    ||||||||||    
T  2014 ttaatattgt 2023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 46; Significance: 2e-17; HSPs: 3)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 5 - 114
Target Start/End: Original strand, 65649 - 65758
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaatttattcatgtttttca 104  Q
    ||||||||| |||| | |||||||||||||||||||||||| |||| || ||||||||||||||||  || | |||||||||| || || ||| ||  ||    
T  65649 agatgtttacgtgtcgcctatgttgctgttgttggttatgtgaaatatttatatgccttatgtggaagatgtttgatgtttaagttgttgatgcttcaca 65748  T
Q  105 ttaatattgt 114  Q
    ||||||||||    
T  65749 ttaatattgt 65758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 87
Target Start/End: Complemental strand, 80700 - 80618
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaa 87  Q
    ||||||||| |||| | |||||||||||||||||||||||| |||| || ||||||||||||||||  || | ||||||||||    
T  80700 agatgtttatgtgtcgcctatgttgctgttgttggttatgtgaaatatttatatgccttatgtggaagatgtttgatgtttaa 80618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 114
Target Start/End: Original strand, 61733 - 61842
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaatttattcatgtttttca 104  Q
    ||||||||| |||| | |||||||||||||||||  ||||| |||| || ||||||||||||||||  || | |||||||||| || || ||| ||  ||    
T  61733 agatgtttatgtgtcgcctatgttgctgttgttgaatatgtgaaatatttatatgccttatgtggaagatgtttgatgtttaagttgttgatgcttcaca 61832  T
Q  105 ttaatattgt 114  Q
    ||||||||||    
T  61833 ttaatattgt 61842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 46; Significance: 2e-17; HSPs: 2)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 5 - 114
Target Start/End: Original strand, 58840 - 58949
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaatttattcatgtttttca 104  Q
    ||||||||| |||| | |||||||||||||||||||||||| |||| || ||||||||||||||||  || | |||||||||| || || ||| ||  ||    
T  58840 agatgtttatgtgtcgcctatgttgctgttgttggttatgtgaaatatttatatgccttatgtggaagatgtttgatgtttaagttgttgatgcttcaca 58939  T
Q  105 ttaatattgt 114  Q
    ||||||||||    
T  58940 ttaatattgt 58949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 123 - 176
Target Start/End: Original strand, 4228 - 4281
Alignment:
Q  123 ttaagttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaat 176  Q
    |||||||||||||| |||||||||||||||  |||||||| ||||| |||||||    
T  4228 ttaagttgtcatttatcaatgagttgttaaggaagaactatgtgaagtattaat 4281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0509 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0509
Description:

Target: scaffold0509; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 123 - 207
Target Start/End: Original strand, 10035 - 10119
Alignment:
Q  123 ttaagttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttgtttaagttattat 207  Q
    ||||||||| |||| |||||||||| ||||| |||||||| || || |||||||||||||||||| |||||||||| ||| ||||    
T  10035 ttaagttgtaatttatcaatgagtttttaatgaagaactatgttaagtattaatatttattaatcgttgttgtttatgttgttat 10119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0156 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0156
Description:

Target: scaffold0156; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 5 - 114
Target Start/End: Complemental strand, 15823 - 15713
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgttgttggttatgt--aaaatgttcatatgccttatgtggagaatatatgatgtttaatttattcatgttttt 102  Q
    ||||||||| |||||  ||||||||||||||||||||||||  ||||| || ||||| |||||||||| ||| |||||||||||| || ||  || ||||    
T  15823 agatgtttacgtgttacctatgttgctgttgttggttatgtgaaaaatatt-atatgtcttatgtggaaaatgtatgatgtttaagttgttggtgctttt 15725  T
Q  103 cattaatattgt 114  Q
    ||||||||||||    
T  15724 cattaatattgt 15713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 123 - 207
Target Start/End: Complemental strand, 20505 - 20421
Alignment:
Q  123 ttaagttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttgtttaagttattat 207  Q
    |||||||||||||| || ||||||||||||   | ||||| ||||| ||||||||||||||||||||||||||||| ||| ||||    
T  20505 ttaagttgtcatttatctatgagttgttaacgcaaaactatgtgaagtattaatatttattaatcattgttgtttatgttgttat 20421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 5 - 113
Target Start/End: Original strand, 80456 - 80564
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaatttattcatgtttttca 104  Q
    ||||||||| |||| | |||||||||||||||||||||| | |||| || ||||||||||||||||  || |||||||||||| || || ||| ||  ||    
T  80456 agatgtttatgtgtcgcctatgttgctgttgttggttatatgaaatatttatatgccttatgtggaagatgtatgatgtttaagttgttgatgcttcaca 80555  T
Q  105 ttaatattg 113  Q
    |||||||||    
T  80556 ttaatattg 80564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1186 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold1186
Description:

Target: scaffold1186; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 123 - 198
Target Start/End: Complemental strand, 473 - 399
Alignment:
Q  123 ttaagttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttgttta 198  Q
    |||||||||||||| |||||||||||||||| |||||||| ||||| |||||||| ||||||||  ||||||||||    
T  473 ttaagttgtcatttatcaatgagttgttaatgaagaactatgtgaagtattaata-ttattaattgttgttgttta 399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 123 - 190
Target Start/End: Complemental strand, 375 - 308
Alignment:
Q  123 ttaagttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcatt 190  Q
    |||||||||||||||||||||||| ||||||| ||||||| ||||| ||||||||||| ||| |||||    
T  375 ttaagttgtcatttgtcaatgagtcgttaatagagaactaggtgaagtattaatattttttagtcatt 308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 31 - 114
Target Start/End: Original strand, 70536 - 70619
Alignment:
Q  31 tgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaatttattcatgtttttcattaatattgt 114  Q
    |||| |||||||||| ||||  | |||||||||||||||| |||||||||||||||| || || ||| ||||||||||||||||    
T  70536 tgttcttggttatgtgaaataattatatgccttatgtggaaaatatatgatgtttaagttgttgatgcttttcattaatattgt 70619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 7 - 114
Target Start/End: Original strand, 207625 - 207732
Alignment:
Q  7 atgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaatttattcatgtttttcatt 106  Q
    ||||||| |||| | |||||||| ||||||||||||||| |||| || ||||||||||||||||  || |||||||||||| || || ||| ||  ||||    
T  207625 atgtttatgtgtcgcctatgttgatgttgttggttatgtgaaatatttatatgccttatgtggaagatgtatgatgtttaagttgttgatgcttcacatt 207724  T
Q  107 aatattgt 114  Q
    ||||||||    
T  207725 aatattgt 207732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 123 - 198
Target Start/End: Original strand, 187795 - 187869
Alignment:
Q  123 ttaagttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttgttta 198  Q
    |||||||||||||| |||||||||||||||| |||||||| ||||| |||||||| ||||||||  ||||||||||    
T  187795 ttaagttgtcatttatcaatgagttgttaatgaagaactatgtgaagtattaata-ttattaattgttgttgttta 187869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 87
Target Start/End: Original strand, 36063 - 36145
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaa 87  Q
    ||||||||| |||| | |||||||||||||||||||||||| ||||  | ||||||||||||||||  || ||||||||||||    
T  36063 agatgtttacgtgtcgcctatgttgctgttgttggttatgtgaaatacttatatgccttatgtggaagatgtatgatgtttaa 36145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 87
Target Start/End: Original strand, 36207 - 36289
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaa 87  Q
    ||||||||| |||| | |||||||||||||||||||||||| |||| || ||||| ||||||||||  || ||||||||||||    
T  36207 agatgtttacgtgtcgcctatgttgctgttgttggttatgtgaaatatttatatgacttatgtggaagatgtatgatgtttaa 36289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 87
Target Start/End: Original strand, 189498 - 189580
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaa 87  Q
    ||||||||| |||| | |||||||||||||||||||||||| |||| || ||||| ||||||||||  || ||||||||||||    
T  189498 agatgtttacgtgtcgcctatgttgctgttgttggttatgtgaaatatttatatgacttatgtggaagatgtatgatgtttaa 189580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0630 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0630
Description:

Target: scaffold0630; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 123 - 215
Target Start/End: Complemental strand, 7950 - 7858
Alignment:
Q  123 ttaagttgtcatttgtcaatgagttgttaataaagaactaa-gtgaaatattaatatttattaatcattgttgtttaagttattatgagatgat 215  Q
    |||||||||||||| |||||||||| | || |||||||||  ||||| |||||||||||||||||| |||||||||| ||| |||| |||||||    
T  7950 ttaagttgtcatttatcaatgagttataaa-aaagaactattgtgaagtattaatatttattaatcgttgttgtttatgttgttataagatgat 7858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0599 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0599
Description:

Target: scaffold0599; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 5 - 114
Target Start/End: Original strand, 1332 - 1441
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaatttattcatgtttttca 104  Q
    ||||||||| ||| || |||||||| ||||||||| ||||| |||| || |||||| ||||||||| ||| ||||||||| || || || ||| | ||||    
T  1332 agatgtttacgtgctggctatgttgttgttgttggctatgtgaaatatttatatgcgttatgtggaaaatgtatgatgttaaagttgttgatgctcttca 1431  T
Q  105 ttaatattgt 114  Q
    ||||||||||    
T  1432 ttaatattgt 1441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0525 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0525
Description:

Target: scaffold0525; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 5 - 70
Target Start/End: Original strand, 3996 - 4061
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtgga 70  Q
    ||||||||| |||| | |||||||||||||||||||||||| |||| || ||||||||||||||||    
T  3996 agatgtttatgtgtcgcctatgttgctgttgttggttatgtgaaatatttatatgccttatgtgga 4061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0375 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0375
Description:

Target: scaffold0375; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 123 - 207
Target Start/End: Original strand, 9579 - 9661
Alignment:
Q  123 ttaagttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttgtttaagttattat 207  Q
    ||||||||| |||| || ||||||||||||| ||||||||  |||| |||||||||||||||||| |||||||||| ||| ||||    
T  9579 ttaagttgtaatttatcgatgagttgttaatgaagaacta--tgaagtattaatatttattaatcgttgttgtttatgttgttat 9661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0372 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0372
Description:

Target: scaffold0372; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 5 - 114
Target Start/End: Original strand, 5222 - 5331
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaatttattcatgtttttca 104  Q
    ||||||||| |||| | ||||||||||| |||||||||||| |||| || ||||||||||||||||  || | |||||||||| || || ||| ||  ||    
T  5222 agatgtttatgtgtcgcctatgttgctgatgttggttatgtgaaatatttatatgccttatgtggaagatgtttgatgtttaagttgttgatgcttcaca 5321  T
Q  105 ttaatattgt 114  Q
    ||||||||||    
T  5322 ttaatattgt 5331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0349
Description:

Target: scaffold0349; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 5 - 114
Target Start/End: Complemental strand, 12407 - 12298
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaatttattcatgtttttca 104  Q
    ||||||||| |||| | |||||||||| ||||||||||||| |||| || ||||||||||||||||  || | |||||||||| || || ||| ||  ||    
T  12407 agatgtttatgtgtcgcctatgttgctattgttggttatgtgaaatatttatatgccttatgtggaagatgtttgatgtttaagttgttgatgcttcaca 12308  T
Q  105 ttaatattgt 114  Q
    ||||||||||    
T  12307 ttaatattgt 12298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0293 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0293
Description:

Target: scaffold0293; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 5 - 114
Target Start/End: Original strand, 20250 - 20359
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaatttattcatgtttttca 104  Q
    ||||||||| |||| | |||||||||||||||||||||||| |||| || ||||  ||||||||||  || |||||||||||| || || ||| ||  ||    
T  20250 agatgtttacgtgtcgcctatgttgctgttgttggttatgtgaaatatttatataacttatgtggaagatgtatgatgtttaagttgttgatgcttcaca 20349  T
Q  105 ttaatattgt 114  Q
    ||||||||||    
T  20350 ttaatattgt 20359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 123 - 176
Target Start/End: Complemental strand, 17136 - 17083
Alignment:
Q  123 ttaagttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaat 176  Q
    |||||||||||||| |||||||||||||||| || |||||||||||||||||||    
T  17136 ttaagttgtcatttatcaatgagttgttaatgaaaaactaagtgaaatattaat 17083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 7 - 87
Target Start/End: Original strand, 14210 - 14290
Alignment:
Q  7 atgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaa 87  Q
    ||||||| |||| | ||||||| |||||||||||||||| |||| || ||||| ||||||||||  |||||||||||||||    
T  14210 atgtttacgtgtcgcctatgttcctgttgttggttatgtgaaatatttatatgacttatgtggaagatatatgatgtttaa 14290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 123 - 207
Target Start/End: Complemental strand, 34009 - 33926
Alignment:
Q  123 ttaagttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttgtttaagttattat 207  Q
    |||||||| ||||| |||||||||||||||| |||||||| ||||| |||||||| ||||||||  |||||||||| ||| ||||    
T  34009 ttaagttgccatttatcaatgagttgttaatgaagaactatgtgaactattaata-ttattaattgttgttgtttatgttgttat 33926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0415 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0415
Description:

Target: scaffold0415; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 87
Target Start/End: Complemental strand, 380 - 298
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaa 87  Q
    ||||||||| |||| | |||||||||||||||||||||||| |||| || ||||| |||||||| |  || ||||||||||||    
T  380 agatgtttacgtgtcgcctatgttgctgttgttggttatgtgaaatatttatatgacttatgtgaaagatgtatgatgtttaa 298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0229 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0229
Description:

Target: scaffold0229; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 87
Target Start/End: Original strand, 11622 - 11704
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaa 87  Q
    ||||||||| |||| | |||||||||||||||||||||||| |||| || ||||| |||||||| |  || ||||||||||||    
T  11622 agatgtttacgtgtcgcctatgttgctgttgttggttatgtgaaatatttatatgacttatgtgaaagatgtatgatgtttaa 11704  T

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Target: scaffold0157 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 87
Target Start/End: Original strand, 32781 - 32863
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaa 87  Q
    ||||||||| |||| | |||||||||||||||||||||||| |||| || ||||| |||||||| |  || ||||||||||||    
T  32781 agatgtttacgtgtcgcctatgttgctgttgttggttatgtgaaatatttatatgacttatgtgaaagatgtatgatgtttaa 32863  T

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Target: scaffold0018 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 67
Target Start/End: Complemental strand, 20831 - 20769
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgt 67  Q
    ||||||||| ||| || |||||||||||||||||||||||| |||| || |||||||||||||    
T  20831 agatgtttacgtgctgcctatgttgctgttgttggttatgtgaaatatttatatgccttatgt 20769  T

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Target: scaffold0061 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 114
Target Start/End: Original strand, 67423 - 67531
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaatttattcatgtttttca 104  Q
    ||||||||| |||| | |||||||| ||||||||||||||| |||| || ||||||||||||||||  || | |||||||||| || || ||| ||  ||    
T  67423 agatgtttatgtgtcgcctatgttgttgttgttggttatgt-aaatatttatatgccttatgtggaagatgtttgatgtttaagttgttgatgcttcaca 67521  T
Q  105 ttaatattgt 114  Q
    ||||||||||    
T  67522 ttaatattgt 67531  T

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Target: scaffold0401 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0401
Description:

Target: scaffold0401; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 123 - 179
Target Start/End: Complemental strand, 7741 - 7685
Alignment:
Q  123 ttaagttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatt 179  Q
    |||||||||||||| |||||||||||||||| |||| ||| ||||| ||||||||||    
T  7741 ttaagttgtcatttatcaatgagttgttaatgaagagctatgtgaagtattaatatt 7685  T

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Target: scaffold0058 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 31 - 111
Target Start/End: Complemental strand, 5802 - 5722
Alignment:
Q  31 tgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaatttattcatgtttttcattaatat 111  Q
    ||||||||||||||| ||||  | ||||| |||||||||| ||| |||||||||||| || || ||| |||||||||||||    
T  5802 tgttgttggttatgtgaaataattatatgtcttatgtggaaaatgtatgatgtttaagttgttgatgcttttcattaatat 5722  T

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Target: scaffold0048 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 123 - 179
Target Start/End: Complemental strand, 55857 - 55801
Alignment:
Q  123 ttaagttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatt 179  Q
    |||||||||||||| |||||||||||||||| |||| ||| ||||| ||||||||||    
T  55857 ttaagttgtcatttatcaatgagttgttaatgaagagctatgtgaagtattaatatt 55801  T

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Target: scaffold1223 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold1223
Description:

Target: scaffold1223; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 123 - 198
Target Start/End: Original strand, 371 - 445
Alignment:
Q  123 ttaagttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttgttta 198  Q
    |||||||||||||| ||||||||| |||||| |||||||| ||||| |||||| | ||||||||  ||||||||||    
T  371 ttaagttgtcatttttcaatgagtggttaatgaagaactatgtgaagtattaaca-ttattaattgttgttgttta 445  T

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Target: scaffold0515 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0515
Description:

Target: scaffold0515; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 31 - 114
Target Start/End: Complemental strand, 4374 - 4291
Alignment:
Q  31 tgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaatttattcatgtttttcattaatattgt 114  Q
    ||||||||||||| | ||||  | ||||| |||||||||| ||| | |||||||||| || || ||||||||||||||||||||    
T  4374 tgttgttggttatatgaaattattatatgtcttatgtggaaaatgtctgatgtttaagttgttgatgtttttcattaatattgt 4291  T

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Target: scaffold0306 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 31 - 114
Target Start/End: Complemental strand, 4374 - 4291
Alignment:
Q  31 tgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaatttattcatgtttttcattaatattgt 114  Q
    ||||||||||||| | ||||  | ||||| |||||||||| ||| | |||||||||| || || ||||||||||||||||||||    
T  4374 tgttgttggttatatgaaattattatatgtcttatgtggaaaatgtctgatgtttaagttgttgatgtttttcattaatattgt 4291  T

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Target: scaffold0138 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 31 - 114
Target Start/End: Complemental strand, 33261 - 33178
Alignment:
Q  31 tgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaatttattcatgtttttcattaatattgt 114  Q
    ||||||||||||||| ||||  | |||||||||||||||| ||| ||||||||| || || || ||| |||| |||||||||||    
T  33261 tgttgttggttatgtgaaataattatatgccttatgtggaaaatgtatgatgttaaagttgttgatgcttttaattaatattgt 33178  T

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Target: scaffold0046 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 31 - 114
Target Start/End: Original strand, 22477 - 22560
Alignment:
Q  31 tgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaatttattcatgtttttcattaatattgt 114  Q
    |||||||| |||||| ||||  | ||||| |||||||||| ||| |||||||||||| || || ||| ||||||||||||||||    
T  22477 tgttgttgattatgtgaaataattatatgtcttatgtggaaaatgtatgatgtttaagttgttgatgcttttcattaatattgt 22560  T

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Target: scaffold0032 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 114
Target Start/End: Complemental strand, 67324 - 67233
Alignment:
Q  23 tatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaatttattcatgtttttcattaatattgt 114  Q
    ||||||||||||||||||||||| |||| || |||||  | ||||| | ||| |||||||||||| || || ||| | ||||||||||||||    
T  67324 tatgttgctgttgttggttatgtgaaatatttatatgaataatgtgaaaaatgtatgatgtttaagttgttgatgctcttcattaatattgt 67233  T

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Target: scaffold0023 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 5 - 87
Target Start/End: Complemental strand, 105161 - 105079
Alignment:
Q  5 agatgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatgatgtttaa 87  Q
    ||||||||| ||| || |||||||| |||||| |||||||  ||||  | |||||||||||||||| ||| ||||||||||||    
T  105161 agatgtttacgtgctgcctatgttgttgttgtcggttatgcgaaataattatatgccttatgtggaaaatgtatgatgtttaa 105079  T

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Target: scaffold0056 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 197 - 234
Target Start/End: Original strand, 79840 - 79877
Alignment:
Q  197 taagttattatgagatgataaatatgtgttgttatatt 234  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  79840 taagttattatgagatgataaatatgtgtggttatatt 79877  T

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Target: scaffold0741 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0741
Description:

Target: scaffold0741; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 79
Target Start/End: Original strand, 4311 - 4383
Alignment:
Q  7 atgtttaagtgttgtctatgttgctgttgttggttatgtaaaatgttcatatgccttatgtggagaatatatg 79  Q
    ||||||| |||||| |||| ||||||||||||||||||| |||| || |||| | ||||||||| ||| ||||    
T  4311 atgtttacgtgttgcctattttgctgttgttggttatgtgaaatatttatatacgttatgtggaaaatgtatg 4383  T

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Target: scaffold0178 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 179
Target Start/End: Original strand, 368 - 424
Alignment:
Q  123 ttaagttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatt 179  Q
    |||||||||||||| |||||||||| ||||| |||||||| ||||| |||| |||||    
T  368 ttaagttgtcatttatcaatgagttattaatgaagaactatgtgaagtattgatatt 424  T

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Target: scaffold0063 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 123 - 198
Target Start/End: Complemental strand, 72941 - 72867
Alignment:
Q  123 ttaagttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatcattgttgttta 198  Q
    ||||||||||| || |||| ||||||||||| |||||||| |||||  ||||||| ||||||||  ||||||||||    
T  72941 ttaagttgtcaattatcaaggagttgttaatgaagaactatgtgaagaattaata-ttattaattgttgttgttta 72867  T

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Target: scaffold0004 (Bit Score: 32; Significance: 0.000000005; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 123 - 162
Target Start/End: Complemental strand, 109063 - 109024
Alignment:
Q  123 ttaagttgtcatttgtcaatgagttgttaataaagaacta 162  Q
    |||||||||||||| |||||||||||||||| ||||||||    
T  109063 ttaagttgtcatttatcaatgagttgttaatgaagaacta 109024  T

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Target: scaffold0004; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 201 - 234
Target Start/End: Complemental strand, 362236 - 362203
Alignment:
Q  201 ttattatgagatgataaatatgtgttgttatatt 234  Q
    ||||||| ||||||||||||||||||||||||||    
T  362236 ttattataagatgataaatatgtgttgttatatt 362203  T

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Target: scaffold0445 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0445
Description:

Target: scaffold0445; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 179
Target Start/End: Original strand, 3165 - 3221
Alignment:
Q  123 ttaagttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatt 179  Q
    ||||||||||| || |||||||||||||||| ||||||||  ||||  |||||||||    
T  3165 ttaagttgtcaattatcaatgagttgttaatgaagaactatatgaagaattaatatt 3221  T

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Target: scaffold0010 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 162
Target Start/End: Original strand, 127606 - 127658
Alignment:
Q  110 attgtcattatatttaagttgtcatttgtcaatgagttgttaataaagaacta 162  Q
    ||||||||| |  |||||||||||||| |||||||||||||||| ||| ||||    
T  127606 attgtcattgtcgttaagttgtcatttttcaatgagttgttaatgaagtacta 127658  T

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