View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3173_high_113 (Length: 240)
Name: NF3173_high_113
Description: NF3173
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3173_high_113 |
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Alignment Details
Target: chr7 (Bit Score: 201; Significance: 1e-110; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 201; E-Value: 1e-110
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 32015151 - 32014931
Alignment:
| Q |
1 |
ttgtcccggatgaatgtagcaaacattgtttctccatctagaaaacgaagcatggaacttacatttatagcaccttgtattggttttctccaaactgtgc |
100 |
Q |
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| T |
32015151 |
ttgtcccggatgaatgtagcaaacattgtttctccatctagaaaacgaagcatgcaacatacatttatagcaccttgtattggttttctccaaactgtgc |
32015052 |
T |
|
| Q |
101 |
tgactaattgatgctgcacaacttctctgctgcggatttccaaagcattttgccatctaaatagaaaattcattcctcgatcacaaacagcaagacaaaa |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32015051 |
tgactaattgatgctgcacaacttctctgctgcggatttcctaagcattttgccatctaaatagaaaattcattcctcgatcacaaacagcaagacaaaa |
32014952 |
T |
|
| Q |
201 |
catgtgcttgtttctcaaaat |
221 |
Q |
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|| |||||||||||| ||||| |
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| T |
32014951 |
caagtgcttgtttcttaaaat |
32014931 |
T |
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