View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3173_high_123 (Length: 236)
Name: NF3173_high_123
Description: NF3173
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3173_high_123 |
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Alignment Details
Target: chr7 (Bit Score: 213; Significance: 1e-117; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 45675746 - 45675526
Alignment:
| Q |
1 |
cattctctgagaacaatgacaatgacacaccaaatattcagattcaaaaaacctctgtgggatccaatgaagtgaagaatctatttgatgatacaccaaa |
100 |
Q |
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| T |
45675746 |
cattctctgagaacaatgacaatgacacaccaaatattcagattcaaaaaacctctgtgggatccaatgaagtgaagaatctatttgatgatacaccaaa |
45675647 |
T |
|
| Q |
101 |
tccaaattctattccaatggataattgtaattatccccttgaaattaattcaaaaatcaacaactcagttaattgcttcacaccttgtgataatatggtt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| |
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| T |
45675646 |
tccaaattctattccaatggataattgtaattatccccttgaaattaattcaaaaatcaacaactcggttaattgcttcataccttgtgataatatggtt |
45675547 |
T |
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| Q |
201 |
ggattaggaggaggatcatat |
221 |
Q |
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||||||||||||||||||||| |
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| T |
45675546 |
ggattaggaggaggatcatat |
45675526 |
T |
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