View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3173_high_72 (Length: 298)
Name: NF3173_high_72
Description: NF3173
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3173_high_72 |
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Alignment Details
Target: chr7 (Bit Score: 245; Significance: 1e-136; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 245; E-Value: 1e-136
Query Start/End: Original strand, 11 - 280
Target Start/End: Original strand, 1908417 - 1908682
Alignment:
| Q |
11 |
ttatactacatagttcaatagtataatttgttcgacttatacaccctaagtttccatgtattgttcctttcaatagtttctacttcttctgtcattccaa |
110 |
Q |
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| T |
1908417 |
ttatactacatagttcaatagtataatttgttcgacttatacaccctaagtttccatgtattgttcctttcaatagtttctacttcttctgtcattccaa |
1908516 |
T |
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| Q |
111 |
ccttccatgcttcattctttagagcttcatgatttattaataggcttaacatacgcttcgttctttagagcttcgtgtttagtttttaatatttactttt |
210 |
Q |
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| T |
1908517 |
ccttccatgcttcattctttagagcttcatgatttatcaataggcttaacatatgc----ttctttagagcttcgtgtttagtttttaatatttactttt |
1908612 |
T |
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| Q |
211 |
gtgttcatgtttttctgaataagttgatatgttccttcatgttaatgcatcatttatatgatgatttaat |
280 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
1908613 |
gtgttcatgtttttctgaataagttgatatgttccttcatgttaatgcatcatttatatgatgatttaat |
1908682 |
T |
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