View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3173_low_55 (Length: 348)
Name: NF3173_low_55
Description: NF3173
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3173_low_55 |
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Alignment Details
Target: chr7 (Bit Score: 311; Significance: 1e-175; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 311; E-Value: 1e-175
Query Start/End: Original strand, 18 - 344
Target Start/End: Complemental strand, 45641511 - 45641185
Alignment:
| Q |
18 |
agaagaaacaccccacaatacagacaaattccatctgaacacaacaaaataaaatcaataatggatatccaaacattactaatcaatcattcaatcaatg |
117 |
Q |
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| T |
45641511 |
agaacaaacacccaacaatacagacaaattccatctgaacacaacaaaataaaatcaataatggatatccaaacattactaatcaatcattcaatcaatg |
45641412 |
T |
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| Q |
118 |
attcaatatgtggattgcattctttggaacaaaaatcattcttctctaataaactcttcaacatagaatgagtaaatttaggatcattagggtcactacc |
217 |
Q |
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| T |
45641411 |
attcaatatgtggattgcattctttggaacaaaaatcattcttctctaataaactcttcaacatagaatgagtaaatttaggatcattagggtcactact |
45641312 |
T |
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| Q |
218 |
agttgacccattagggttttccaatacatttggacgcgaaaaacaaaacttgcaaccaaatccatttcgagtagtagtactattatgaccctcaccttga |
317 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45641311 |
agttgacccattagggttttccaatacatttggacgcgaaaaacaaaacttgcaaccaaatccatttcgagtagtagtactattatgaccctcaccttga |
45641212 |
T |
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| Q |
318 |
ataatcaccaccttacctatgctactc |
344 |
Q |
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|||||||||||||||||| |||||||| |
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| T |
45641211 |
ataatcaccaccttacctctgctactc |
45641185 |
T |
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