View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3173_low_92 (Length: 263)
Name: NF3173_low_92
Description: NF3173
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3173_low_92 |
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Alignment Details
Target: chr2 (Bit Score: 229; Significance: 1e-126; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 1 - 256
Target Start/End: Original strand, 8261568 - 8261830
Alignment:
| Q |
1 |
tgttcataaaagcaagaatcggatattgttaccaactataactagaatacaaccttatcaaaaaagtgatgaacctttaaaaagaatcaaactaaacata |
100 |
Q |
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| T |
8261568 |
tgttcataaaagcaagaatcggatattgttaccaactataactagaatacaaccttatcaaaaaagtgatgaacctttaaaaagaatcaaactaaacata |
8261667 |
T |
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| Q |
101 |
aagattgatttgtcttttcactttaatcaagtccctacctcccaaaattgaaaagaaaaaagttatacaaatttcatacctaccttaccaaattcatatt |
200 |
Q |
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| T |
8261668 |
aagattgatttgtcttttcactttaatcaagtccctacctcccaaaattgaaaagaaaaaagttatacaaatttcatacctaccttaccaaattcatatt |
8261767 |
T |
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| Q |
201 |
tcatattccactcccaagaaattgatcataa-------gtcacataaaacatatgcctatgct |
256 |
Q |
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| T |
8261768 |
tcatattccactcccaagaaattgattataactccaacttcacataaaacatatgcctatgct |
8261830 |
T |
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