View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3174_low_11 (Length: 281)

Name: NF3174_low_11
Description: NF3174
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3174_low_11
NF3174_low_11
[»] chr4 (33 HSPs)
chr4 (13-170)||(24517986-24518158)
chr4 (15-90)||(29581049-29581124)
chr4 (121-161)||(24518154-24518194)
chr4 (15-90)||(45874102-45874178)
chr4 (33-75)||(12767149-12767191)
chr4 (15-83)||(1174005-1174074)
chr4 (15-91)||(12735477-12735554)
chr4 (15-75)||(53457886-53457947)
chr4 (16-83)||(238464-238532)
chr4 (17-63)||(48822887-48822934)
chr4 (15-60)||(1966627-1966673)
chr4 (15-60)||(26424863-26424909)
chr4 (15-60)||(34739357-34739403)
chr4 (19-60)||(39807921-39807963)
chr4 (15-60)||(43139911-43139957)
chr4 (17-89)||(19673936-19674009)
chr4 (15-62)||(12867916-12867964)
chr4 (15-90)||(22608032-22608108)
chr4 (15-90)||(23417488-23417564)
chr4 (19-90)||(24417887-24417959)
chr4 (15-90)||(28798393-28798469)
chr4 (20-75)||(37134110-37134166)
chr4 (23-62)||(52768313-52768353)
chr4 (15-60)||(18257406-18257452)
chr4 (15-60)||(19849508-19849554)
chr4 (15-60)||(23710338-23710384)
chr4 (15-60)||(31015059-31015105)
chr4 (16-81)||(37620673-37620739)
chr4 (19-59)||(23532125-23532166)
chr4 (20-60)||(52172000-52172041)
chr4 (15-62)||(1125962-1126010)
chr4 (15-70)||(16555374-16555430)
chr4 (15-90)||(55214699-55214775)
[»] chr3 (25 HSPs)
chr3 (15-90)||(43775270-43775346)
chr3 (15-90)||(43247655-43247731)
chr3 (17-90)||(33334655-33334729)
chr3 (15-75)||(3113000-3113061)
chr3 (15-90)||(38257308-38257384)
chr3 (16-90)||(55018040-55018115)
chr3 (15-60)||(7824459-7824505)
chr3 (15-60)||(9349681-9349727)
chr3 (15-60)||(29689487-29689533)
chr3 (15-60)||(36228999-36229045)
chr3 (15-60)||(54158343-54158389)
chr3 (15-75)||(4601487-4601548)
chr3 (15-90)||(28844551-28844628)
chr3 (15-83)||(51665930-51665999)
chr3 (15-75)||(52500900-52500961)
chr3 (13-59)||(27230744-27230791)
chr3 (15-60)||(42392810-42392856)
chr3 (15-60)||(54151686-54151732)
chr3 (15-60)||(55320405-55320451)
chr3 (15-60)||(475286-475331)
chr3 (15-75)||(8151410-8151471)
chr3 (15-86)||(1778902-1778974)
chr3 (34-90)||(35461504-35461560)
chr3 (15-74)||(40756732-40756792)
chr3 (15-86)||(47635010-47635082)
[»] chr8 (31 HSPs)
chr8 (15-90)||(28817303-28817379)
chr8 (15-90)||(32333161-32333237)
chr8 (15-90)||(35779502-35779578)
chr8 (15-74)||(40932772-40932832)
chr8 (15-90)||(41849237-41849312)
chr8 (15-60)||(31532130-31532176)
chr8 (15-75)||(42192644-42192705)
chr8 (15-75)||(42885236-42885297)
chr8 (15-90)||(1345-1421)
chr8 (15-90)||(7792708-7792784)
chr8 (15-60)||(70528-70574)
chr8 (15-60)||(1078653-1078699)
chr8 (15-60)||(6602523-6602569)
chr8 (15-60)||(6677976-6678022)
chr8 (15-60)||(7813399-7813445)
chr8 (33-71)||(42364726-42364764)
chr8 (15-59)||(9292096-9292141)
chr8 (19-90)||(3822443-3822515)
chr8 (15-75)||(7403700-7403760)
chr8 (15-62)||(20269605-20269653)
chr8 (15-62)||(21056234-21056282)
chr8 (15-62)||(29425426-29425474)
chr8 (15-60)||(39303386-39303433)
chr8 (15-60)||(4530987-4531033)
chr8 (15-84)||(9775047-9775117)
chr8 (15-60)||(13891167-13891213)
chr8 (15-60)||(31695274-31695320)
chr8 (19-60)||(45264649-45264691)
chr8 (15-75)||(39435344-39435405)
chr8 (33-74)||(41753004-41753045)
chr8 (17-60)||(5385415-5385459)
[»] chr1 (23 HSPs)
chr1 (15-90)||(35945844-35945920)
chr1 (15-90)||(28455921-28455997)
chr1 (15-90)||(48660069-48660145)
chr1 (15-60)||(13109847-13109893)
chr1 (15-91)||(7059513-7059590)
chr1 (15-75)||(41808264-41808325)
chr1 (16-90)||(41761417-41761492)
chr1 (15-60)||(5055793-5055839)
chr1 (15-60)||(32007151-32007197)
chr1 (17-90)||(39276397-39276471)
chr1 (15-60)||(41039308-41039354)
chr1 (15-60)||(45813016-45813062)
chr1 (15-75)||(29994388-29994449)
chr1 (15-90)||(192462-192538)
chr1 (15-90)||(26032848-26032924)
chr1 (15-74)||(26264541-26264601)
chr1 (15-60)||(20825-20871)
chr1 (15-60)||(5943758-5943804)
chr1 (15-60)||(13097381-13097427)
chr1 (15-59)||(7275759-7275804)
chr1 (15-59)||(25931162-25931207)
chr1 (15-75)||(49783769-49783830)
chr1 (16-55)||(11688345-11688385)
[»] scaffold0032 (1 HSPs)
scaffold0032 (15-90)||(56528-56604)
[»] chr7 (33 HSPs)
chr7 (15-62)||(11355898-11355946)
chr7 (15-90)||(44083987-44084063)
chr7 (17-85)||(5772826-5772895)
chr7 (15-75)||(25546280-25546341)
chr7 (15-75)||(31288229-31288290)
chr7 (15-90)||(43753758-43753835)
chr7 (15-75)||(47570723-47570784)
chr7 (15-90)||(2146683-2146759)
chr7 (15-90)||(40058285-40058361)
chr7 (17-90)||(27229484-27229559)
chr7 (15-60)||(4106815-4106861)
chr7 (15-60)||(4107386-4107432)
chr7 (33-75)||(10220496-10220538)
chr7 (15-64)||(19630673-19630723)
chr7 (15-60)||(23358262-23358308)
chr7 (15-60)||(31770537-31770583)
chr7 (15-60)||(38781213-38781259)
chr7 (20-74)||(46427423-46427477)
chr7 (15-83)||(25112252-25112321)
chr7 (20-60)||(34763519-34763560)
chr7 (15-75)||(47557843-47557904)
chr7 (15-62)||(5462955-5463003)
chr7 (15-62)||(27915585-27915633)
chr7 (15-90)||(28603058-28603134)
chr7 (15-60)||(8439155-8439201)
chr7 (15-60)||(38033806-38033852)
chr7 (15-60)||(48146830-48146876)
chr7 (15-59)||(15634884-15634929)
chr7 (15-83)||(35309908-35309977)
chr7 (15-83)||(41183869-41183938)
chr7 (15-55)||(47250256-47250297)
chr7 (15-59)||(48444157-48444202)
chr7 (15-90)||(39513988-39514064)
[»] chr5 (15 HSPs)
chr5 (15-90)||(21018270-21018346)
chr5 (15-91)||(2971030-2971107)
chr5 (15-75)||(41580080-41580141)
chr5 (15-90)||(35317702-35317778)
chr5 (15-60)||(4824944-4824990)
chr5 (15-60)||(29265952-29265998)
chr5 (15-60)||(31909390-31909436)
chr5 (15-60)||(32143419-32143465)
chr5 (15-91)||(12257402-12257479)
chr5 (15-90)||(13204004-13204080)
chr5 (15-90)||(40177671-40177747)
chr5 (15-57)||(23262624-23262667)
chr5 (15-60)||(2786348-2786393)
chr5 (15-75)||(17984747-17984808)
chr5 (15-90)||(6021039-6021115)
[»] chr2 (20 HSPs)
chr2 (15-90)||(23839906-23839982)
chr2 (15-90)||(34460416-34460492)
chr2 (15-90)||(45125170-45125246)
chr2 (15-90)||(11816555-11816632)
chr2 (15-90)||(19537354-19537430)
chr2 (15-90)||(26605671-26605747)
chr2 (15-90)||(37197615-37197691)
chr2 (15-60)||(10639611-10639657)
chr2 (15-60)||(29659223-29659269)
chr2 (15-60)||(33083559-33083605)
chr2 (15-60)||(42578245-42578291)
chr2 (16-60)||(4851397-4851442)
chr2 (15-59)||(43778473-43778518)
chr2 (15-90)||(11708725-11708801)
chr2 (15-74)||(44181892-44181952)
chr2 (15-60)||(11459792-11459838)
chr2 (15-84)||(27137923-27137993)
chr2 (15-60)||(39831449-39831495)
chr2 (15-75)||(40825163-40825224)
chr2 (15-90)||(4800923-4800999)
[»] chr6 (11 HSPs)
chr6 (18-72)||(10999416-10999471)
chr6 (15-60)||(4464204-4464250)
chr6 (15-60)||(33621571-33621617)
chr6 (15-60)||(35218645-35218691)
chr6 (15-75)||(2959211-2959272)
chr6 (15-90)||(21037338-21037413)
chr6 (17-60)||(33704293-33704337)
chr6 (15-60)||(19145547-19145593)
chr6 (15-75)||(361073-361134)
chr6 (15-83)||(21000746-21000815)
chr6 (38-94)||(17590391-17590447)
[»] scaffold0119 (2 HSPs)
scaffold0119 (15-90)||(13956-14032)
scaffold0119 (15-90)||(19636-19712)
[»] scaffold1348 (1 HSPs)
scaffold1348 (15-60)||(867-913)
[»] scaffold0053 (1 HSPs)
scaffold0053 (15-60)||(22240-22286)
[»] scaffold0352 (1 HSPs)
scaffold0352 (15-60)||(8948-8994)
[»] scaffold0044 (1 HSPs)
scaffold0044 (15-60)||(9978-10024)


Alignment Details
Target: chr4 (Bit Score: 74; Significance: 5e-34; HSPs: 33)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 13 - 170
Target Start/End: Original strand, 24517986 - 24518158
Alignment:
Q  13 tgagatgaagtggtaatccatgaaa-ttaaactcacacacaactgtgagatttcggattcgaacacaggtcacaacgtct--------------agcatt 97  Q
    |||||| |||||||||| ||| ||| ||||||||||||| || ||||||||||||| ||||||||| ||||||||||||               ||||||    
T  24517986 tgagattaagtggtaattcattaaaattaaactcacacataattgtgagatttcgggttcgaacacgggtcacaacgtccggtcttacaatttcagcatt 24518085  T
Q  98 tgtcagaatatccagaagtaagaaattacgagttagaatgtgtgtcacaacatatcagatgtttctgcaatta 170  Q
    |||||||||||| |||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  24518086 tgtcagaatatcgagaaataagaaattacgagttagaatgtgtgttacaacatatcagatgtttctgcaatta 24518158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 15 - 90
Target Start/End: Original strand, 29581049 - 29581124
Alignment:
Q  15 agatgaagtggtaatccatgaaattaaactcacacacaactgtgagatttcggattcgaacacaggtcacaacgtc 90  Q
    ||||||||||||||||||  |||||||||||||||||||||||||| | |||| |||||||  ||||||| |||||    
T  29581049 agatgaagtggtaatccactaaattaaactcacacacaactgtgaggtctcgggttcgaacctaggtcacgacgtc 29581124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 121 - 161
Target Start/End: Original strand, 24518154 - 24518194
Alignment:
Q  121 aattacgagttagaatgtgtgtcacaacatatcagatgttt 161  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  24518154 aattacgagttagaatgtgtgtcacaacatatcagatgttt 24518194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 15 - 90
Target Start/End: Complemental strand, 45874178 - 45874102
Alignment:
Q  15 agatgaagtggtaatcca-tgaaattaaactcacacacaactgtgagatttcggattcgaacacaggtcacaacgtc 90  Q
    |||||||||||||||||| ||||| |||||||||||||||||||||| |  ||| ||||||| | ||||||||||||    
T  45874178 agatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcacaacgtc 45874102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 33 - 75
Target Start/End: Complemental strand, 12767191 - 12767149
Alignment:
Q  33 tgaaattaaactcacacacaactgtgagatttcggattcgaac 75  Q
    |||||||||||||||||||||||||||| ||||||||||||||    
T  12767191 tgaaattaaactcacacacaactgtgaggtttcggattcgaac 12767149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 15 - 83
Target Start/End: Complemental strand, 1174074 - 1174005
Alignment:
Q  15 agatgaagtggtaatcca-tgaaattaaactcacacacaactgtgagatttcggattcgaacacaggtca 83  Q
    |||||||||||||||||| ||||| |||||||||||||||||||||| |  ||| ||||||| |||||||    
T  1174074 agatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtca 1174005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 15 - 91
Target Start/End: Complemental strand, 12735554 - 12735477
Alignment:
Q  15 agatgaagtggtaatcca-tgaaattaaactcacacacaactgtgagatttcggattcgaacacaggtcacaacgtct 91  Q
    |||||||||||||||||| ||||| |||||||||||||||||||||| |   || ||||||| | |||||||||||||    
T  12735554 agatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcctgggttcgaacccgggtcacaacgtct 12735477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 15 - 75
Target Start/End: Complemental strand, 53457947 - 53457886
Alignment:
Q  15 agatgaagtggtaatcca-tgaaattaaactcacacacaactgtgagatttcggattcgaac 75  Q
    |||||||||||||||||| ||||| |||||||||||||||||||||| |  |||||||||||    
T  53457947 agatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccggattcgaac 53457886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 16 - 83
Target Start/End: Original strand, 238464 - 238532
Alignment:
Q  16 gatgaagtggtaatcca-tgaaattaaactcacacacaactgtgagatttcggattcgaacacaggtca 83  Q
    ||||||||||||||||| ||||| |||||||||||||||||||||| |  ||| ||||||| |||||||    
T  238464 gatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtca 238532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 17 - 63
Target Start/End: Complemental strand, 48822934 - 48822887
Alignment:
Q  17 atgaagtggtaatccat-gaaattaaactcacacacaactgtgagatt 63  Q
    |||||||||||||| || ||||||||||||||||||||||||||||||    
T  48822934 atgaagtggtaatctattgaaattaaactcacacacaactgtgagatt 48822887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 60
Target Start/End: Complemental strand, 1966673 - 1966627
Alignment:
Q  15 agatgaagtggtaatcca-tgaaattaaactcacacacaactgtgag 60  Q
    ||||||||| |||||||| ||||||||||||||||||||||||||||    
T  1966673 agatgaagttgtaatccactgaaattaaactcacacacaactgtgag 1966627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 60
Target Start/End: Original strand, 26424863 - 26424909
Alignment:
Q  15 agatgaagtggtaatcca-tgaaattaaactcacacacaactgtgag 60  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||||    
T  26424863 agatgaagtggtaatccactgaaaataaactcacacacaactgtgag 26424909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 60
Target Start/End: Complemental strand, 34739403 - 34739357
Alignment:
Q  15 agatgaagtggtaatcca-tgaaattaaactcacacacaactgtgag 60  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||||    
T  34739403 agatgaagtggtaatccactgaaaataaactcacacacaactgtgag 34739357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 60
Target Start/End: Complemental strand, 39807963 - 39807921
Alignment:
Q  19 gaagtggtaatcca-tgaaattaaactcacacacaactgtgag 60  Q
    |||||||||||||| ||||||||||||||||||||||||||||    
T  39807963 gaagtggtaatccactgaaattaaactcacacacaactgtgag 39807921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 60
Target Start/End: Original strand, 43139911 - 43139957
Alignment:
Q  15 agatgaagtggtaatcca-tgaaattaaactcacacacaactgtgag 60  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||||    
T  43139911 agatgaagtggtaatccactgaaaataaactcacacacaactgtgag 43139957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 17 - 89
Target Start/End: Original strand, 19673936 - 19674009
Alignment:
Q  17 atgaagtggtaatcca-tgaaattaaactcacacacaactgtgagatttcggattcgaacacaggtcacaacgt 89  Q
    |||||||||||||||| ||||||||||||| |||| || |||||| |  ||| ||||||| |||||||||||||    
T  19673936 atgaagtggtaatccactgaaattaaactcgcacataattgtgaggtcccgggttcgaacccaggtcacaacgt 19674009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 62
Target Start/End: Complemental strand, 12867964 - 12867916
Alignment:
Q  15 agatgaagtggtaatcca-tgaaattaaactcacacacaactgtgagat 62  Q
    |||||||||||||||||| ||||| ||||||||| ||||||||||||||    
T  12867964 agatgaagtggtaatccactgaaaataaactcactcacaactgtgagat 12867916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 90
Target Start/End: Complemental strand, 22608108 - 22608032
Alignment:
Q  15 agatgaagtggtaatccat-gaaattaaactcacacacaactgtgagatttcggattcgaacacaggtcacaacgtc 90  Q
    ||||||||| ||||||||| ||||||||||||| ||||||||||||| |  ||| ||||||| | |||||| |||||    
T  22608108 agatgaagtagtaatccattgaaattaaactcagacacaactgtgaggtcccgggttcgaacccgggtcacgacgtc 22608032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 90
Target Start/End: Original strand, 23417488 - 23417564
Alignment:
Q  15 agatgaagtggtaatcca-tgaaattaaactcacacacaactgtgagatttcggattcgaacacaggtcacaacgtc 90  Q
    |||||||||||||||||| ||||| ||||||||||||||||||| |  |  ||| ||||||| | ||||||||||||    
T  23417488 agatgaagtggtaatccactgaaaataaactcacacacaactgtaaagtcccgggttcgaacccgggtcacaacgtc 23417564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 90
Target Start/End: Original strand, 24417887 - 24417959
Alignment:
Q  19 gaagtggtaatcca-tgaaattaaactcacacacaactgtgagatttcggattcgaacacaggtcacaacgtc 90  Q
    |||||||||||||| | ||||||||||||  |||||||||||| | |||||||||||| | |||||| |||||    
T  24417887 gaagtggtaatccactaaaattaaactcatccacaactgtgaggtctcggattcgaacccgggtcacgacgtc 24417959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 90
Target Start/End: Original strand, 28798393 - 28798469
Alignment:
Q  15 agatgaagtggtaatcca-tgaaattaaactcacacacaactgtgagatttcggattcgaacacaggtcacaacgtc 90  Q
    |||||||||||||||||| ||||| ||||||||||||||||||| || |  ||| ||||||| | |||||| |||||    
T  28798393 agatgaagtggtaatccactgaaaataaactcacacacaactgtaaggtcccgggttcgaacccgggtcacgacgtc 28798469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 75
Target Start/End: Complemental strand, 37134166 - 37134110
Alignment:
Q  20 aagtggtaatcca-tgaaattaaactcacacacaactgtgagatttcggattcgaac 75  Q
    ||||||||| ||| |||||||||||||||||||||||||||  |||||| |||||||    
T  37134166 aagtggtaaaccactgaaattaaactcacacacaactgtgaagtttcgggttcgaac 37134110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 62
Target Start/End: Original strand, 52768313 - 52768353
Alignment:
Q  23 tggtaatccat-gaaattaaactcacacacaactgtgagat 62  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  52768313 tggtaatccattgaaattaaactcacacacaactgtgagat 52768353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 60
Target Start/End: Complemental strand, 18257452 - 18257406
Alignment:
Q  15 agatgaagtggtaatcca-tgaaattaaactcacacacaactgtgag 60  Q
    |||||||||||||||||| ||||| ||||||||| ||||||||||||    
T  18257452 agatgaagtggtaatccactgaaaataaactcacgcacaactgtgag 18257406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 60
Target Start/End: Original strand, 19849508 - 19849554
Alignment:
Q  15 agatgaagtggtaatccat-gaaattaaactcacacacaactgtgag 60  Q
    |||||||||||||| |||| |||| ||||||||||||||||||||||    
T  19849508 agatgaagtggtaaaccattgaaaataaactcacacacaactgtgag 19849554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 60
Target Start/End: Original strand, 23710338 - 23710384
Alignment:
Q  15 agatgaagtggtaatcca-tgaaattaaactcacacacaactgtgag 60  Q
    |||||||||||||||||| |||||||||||||||||  |||||||||    
T  23710338 agatgaagtggtaatccactgaaattaaactcacacgtaactgtgag 23710384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 60
Target Start/End: Complemental strand, 31015105 - 31015059
Alignment:
Q  15 agatgaagtggtaatcca-tgaaattaaactcacacacaactgtgag 60  Q
    ||||||||||||||  || ||||||||||||||||||||||||||||    
T  31015105 agatgaagtggtaaagcactgaaattaaactcacacacaactgtgag 31015059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 81
Target Start/End: Complemental strand, 37620739 - 37620673
Alignment:
Q  16 gatgaagtggtaatcca-tgaaattaaactcacacacaactgtgagatttcggattcgaacacaggt 81  Q
    ||||||||||||||||| |||||||||||||||||| | |||||| ||  ||| ||||||| |||||    
T  37620739 gatgaagtggtaatccactgaaattaaactcacacaaacctgtgatatcccgggttcgaacccaggt 37620673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 59
Target Start/End: Complemental strand, 23532166 - 23532125
Alignment:
Q  19 gaagtggtaatcca-tgaaattaaactcacacacaactgtga 59  Q
    ||||||||||| || |||||||||||||||||||||||||||    
T  23532166 gaagtggtaattcactgaaattaaactcacacacaactgtga 23532125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 60
Target Start/End: Original strand, 52172000 - 52172041
Alignment:
Q  20 aagtggtaatcca-tgaaattaaactcacacacaactgtgag 60  Q
    ||||||||||||| ||||||||||||||||||||| ||||||    
T  52172000 aagtggtaatccactgaaattaaactcacacacaattgtgag 52172041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 15 - 62
Target Start/End: Complemental strand, 1126010 - 1125962
Alignment:
Q  15 agatgaagtggtaatccat-gaaattaaactcacacacaactgtgagat 62  Q
    |||||||||||||||  || ||||||||||||| |||||||||||||||    
T  1126010 agatgaagtggtaatttattgaaattaaactcatacacaactgtgagat 1125962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 15 - 70
Target Start/End: Complemental strand, 16555430 - 16555374
Alignment:
Q  15 agatgaagtggtaatccatgaaa-ttaaactcacacacaactgtgagatttcggatt 70  Q
    ||||||||||||||| ||| ||| ||||| ||||||||||||||||| |||| ||||    
T  16555430 agatgaagtggtaattcattaaaattaaattcacacacaactgtgaggtttcagatt 16555374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 15 - 90
Target Start/End: Complemental strand, 55214775 - 55214699
Alignment:
Q  15 agatgaagtggtaatcca-tgaaattaaactcacacacaactgtgagatttcggattcgaacacaggtcacaacgtc 90  Q
    |||| ||||||||||||| ||||| |||||||| ||||||||||||| |  ||| ||||||| | |||||| |||||    
T  55214775 agataaagtggtaatccactgaaaataaactcatacacaactgtgaggtcccgggttcgaacccgggtcacgacgtc 55214699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 49; Significance: 4e-19; HSPs: 25)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 15 - 90
Target Start/End: Complemental strand, 43775346 - 43775270
Alignment:
Q  15 agatgaagtggtaatcca-tgaaattaaactcacacacaactgtgagatttcggattcgaacacaggtcacaacgtc 90  Q
    |||||||||||||||||| |||||||||||||| | |||||||||||||| ||||||||||| || |||||||||||    
T  43775346 agatgaagtggtaatccactgaaattaaactcaaatacaactgtgagattccggattcgaacgcaagtcacaacgtc 43775270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 15 - 90
Target Start/End: Original strand, 43247655 - 43247731
Alignment:
Q  15 agatgaagtggtaatcca-tgaaattaaactcacacacaactgtgagatttcggattcgaacacaggtcacaacgtc 90  Q
    |||||||||||||||||| ||||| |||||||||||||||||||||| |  ||| ||||||| ||||||||||||||    
T  43247655 agatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcacaacgtc 43247731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 17 - 90
Target Start/End: Complemental strand, 33334729 - 33334655
Alignment:
Q  17 atgaagtggtaatcca-tgaaattaaactcacacacaactgtgagatttcggattcgaacacaggtcacaacgtc 90  Q
    |||||||| ||||| | |||||||||||||||||||||||||||| |  ||||||||||| ||||||||||||||    
T  33334729 atgaagtgataatctactgaaattaaactcacacacaactgtgaggtcccggattcgaactcaggtcacaacgtc 33334655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 15 - 75
Target Start/End: Original strand, 3113000 - 3113061
Alignment:
Q  15 agatgaagtggtaatcca-tgaaattaaactcacacacaactgtgagatttcggattcgaac 75  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||||||  ||| |||||||    
T  3113000 agatgaagtggtaatccactgaaaataaactcacacacaactgtgagatcccgggttcgaac 3113061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 15 - 90
Target Start/End: Original strand, 38257308 - 38257384
Alignment:
Q  15 agatgaagtggtaatcca-tgaaattaaactcacacacaactgtgagatttcggattcgaacacaggtcacaacgtc 90  Q
    |||||||||||||||||  ||||||||||||||||||||| |||||| ||  || ||||||| |||||||| |||||    
T  38257308 agatgaagtggtaatccgctgaaattaaactcacacacaattgtgaggttctgggttcgaacccaggtcacgacgtc 38257384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 16 - 90
Target Start/End: Original strand, 55018040 - 55018115
Alignment:
Q  16 gatgaagtggtaatcca-tgaaattaaactcacacacaactgtgagatttcggattcgaacacaggtcacaacgtc 90  Q
    ||||||||||||||||| ||||| |||||||||||||||||||||| |  ||| ||||||| | |||||| |||||    
T  55018040 gatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcacgacgtc 55018115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 60
Target Start/End: Original strand, 7824459 - 7824505
Alignment:
Q  15 agatgaagtggtaatcca-tgaaattaaactcacacacaactgtgag 60  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||||    
T  7824459 agatgaagtggtaatccactgaaaataaactcacacacaactgtgag 7824505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 60
Target Start/End: Original strand, 9349681 - 9349727
Alignment:
Q  15 agatgaagtggtaatcca-tgaaattaaactcacacacaactgtgag 60  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||||    
T  9349681 agatgaagtggtaatccactgaaaataaactcacacacaactgtgag 9349727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 60
Target Start/End: Original strand, 29689487 - 29689533
Alignment:
Q  15 agatgaagtggtaatcca-tgaaattaaactcacacacaactgtgag 60  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||||    
T  29689487 agatgaagtggtaatccactgaaaataaactcacacacaactgtgag 29689533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 60
Target Start/End: Original strand, 36228999 - 36229045
Alignment:
Q  15 agatgaagtggtaatccat-gaaattaaactcacacacaactgtgag 60  Q
    ||||||||||||||||||| |||| ||||||||||||||||||||||    
T  36228999 agatgaagtggtaatccattgaaaataaactcacacacaactgtgag 36229045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 60
Target Start/End: Complemental strand, 54158389 - 54158343
Alignment:
Q  15 agatgaagtggtaatcca-tgaaattaaactcacacacaactgtgag 60  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||||    
T  54158389 agatgaagtggtaatccactgaaaataaactcacacacaactgtgag 54158343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 15 - 75
Target Start/End: Complemental strand, 4601548 - 4601487
Alignment:
Q  15 agatgaagtggtaatcca-tgaaattaaactcacacacaactgtgagatttcggattcgaac 75  Q
    ||||||| |||||||||| ||||| |||||||||||||||||||||| || ||| |||||||    
T  4601548 agatgaactggtaatccactgaaaataaactcacacacaactgtgaggttccgggttcgaac 4601487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 15 - 90
Target Start/End: Complemental strand, 28844628 - 28844551
Alignment:
Q  15 agatgaagtggtaatcca-tgaaat-taaactcacacacaactgtgagatttcggattcgaacacaggtcacaacgtc 90  Q
    |||||||||||||||||| |||||  |||||||||||||||||||||| || | | ||||||| | ||||||||||||    
T  28844628 agatgaagtggtaatccactgaaaaataaactcacacacaactgtgaggttccaggttcgaacccgggtcacaacgtc 28844551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 15 - 83
Target Start/End: Original strand, 51665930 - 51665999
Alignment:
Q  15 agatgaagtggtaatcca-tgaaattaaactcacacacaactgtgagatttcggattcgaacacaggtca 83  Q
    |||||||||||||||||| ||||| ||||||||||||||||||| || |  ||| ||||||| |||||||    
T  51665930 agatgaagtggtaatccactgaaaataaactcacacacaactgtaaggtcccgggttcgaacccaggtca 51665999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 15 - 75
Target Start/End: Complemental strand, 52500961 - 52500900
Alignment:
Q  15 agatgaagtggtaatcca-tgaaattaaactcacacacaactgtgagatttcggattcgaac 75  Q
    |||||||||||||||| | ||||| |||||||||||||||||||||| |||| | |||||||    
T  52500961 agatgaagtggtaatctactgaaaataaactcacacacaactgtgaggtttcaggttcgaac 52500900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 13 - 59
Target Start/End: Complemental strand, 27230791 - 27230744
Alignment:
Q  13 tgagatgaagtggtaatcca-tgaaattaaactcacacacaactgtga 59  Q
    ||||||||||||||||| || |||||||||| ||||||||||||||||    
T  27230791 tgagatgaagtggtaattcactgaaattaaattcacacacaactgtga 27230744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 60
Target Start/End: Original strand, 42392810 - 42392856
Alignment:
Q  15 agatgaagtggtaatcca-tgaaattaaactcacacacaactgtgag 60  Q
    |||||||||||||| ||| ||||||||||||||||||||| ||||||    
T  42392810 agatgaagtggtaaaccactgaaattaaactcacacacaattgtgag 42392856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 60
Target Start/End: Original strand, 54151686 - 54151732
Alignment:
Q  15 agatgaagtggtaatcca-tgaaattaaactcacacacaactgtgag 60  Q
    |||||||||||||||||| ||||| |||||||| |||||||||||||    
T  54151686 agatgaagtggtaatccactgaaaataaactcatacacaactgtgag 54151732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 60
Target Start/End: Original strand, 55320405 - 55320451
Alignment:
Q  15 agatgaagtggtaatcca-tgaaattaaactcacacacaactgtgag 60  Q
    |||||||||||||||||| ||||| ||||||||||||||||| ||||    
T  55320405 agatgaagtggtaatccactgaaaataaactcacacacaactatgag 55320451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 60
Target Start/End: Original strand, 475286 - 475331
Alignment:
Q  15 agatgaagtggtaatccatgaaattaaactcacacacaactgtgag 60  Q
    ||||||||||||||| ||   |||||||||||||||||||||||||    
T  475286 agatgaagtggtaattcactgaattaaactcacacacaactgtgag 475331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 75
Target Start/End: Complemental strand, 8151471 - 8151410
Alignment:
Q  15 agatgaagtggtaatccat-gaaattaaactcacacacaactgtgagatttcggattcgaac 75  Q
    |||||||  |||||||||| ||||||||||| ||||| ||||||||||| |||| |||||||    
T  8151471 agatgaaccggtaatccattgaaattaaactgacacataactgtgagatctcgggttcgaac 8151410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 15 - 86
Target Start/End: Complemental strand, 1778974 - 1778902
Alignment:
Q  15 agatgaagtggtaatcca-tgaaattaaactcacacacaactgtgagatttcggattcgaacacaggtcacaa 86  Q
    |||||||||||||||||| ||||| |||| ||| |||||| |||||| || ||| ||||||| | ||||||||    
T  1778974 agatgaagtggtaatccattgaaaataaattcaaacacaattgtgaggttccgggttcgaacccgggtcacaa 1778902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 34 - 90
Target Start/End: Original strand, 35461504 - 35461560
Alignment:
Q  34 gaaattaaactcacacacaactgtgagatttcggattcgaacacaggtcacaacgtc 90  Q
    |||| |||||||||||||||||||||| || ||| ||||||| | | ||||||||||    
T  35461504 gaaaataaactcacacacaactgtgaggttccgggttcgaacccggatcacaacgtc 35461560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 15 - 74
Target Start/End: Original strand, 40756732 - 40756792
Alignment:
Q  15 agatgaagtggtaatcca-tgaaattaaactcacacacaactgtgagatttcggattcgaa 74  Q
    |||||||||||||| | | ||||||||||||||||| |||||||||| | |||| ||||||    
T  40756732 agatgaagtggtaaactactgaaattaaactcacacgcaactgtgaggtctcgggttcgaa 40756792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 15 - 86
Target Start/End: Original strand, 47635010 - 47635082
Alignment:
Q  15 agatgaagtggtaatcca-tgaaattaaactcacacacaactgtgagatttcggattcgaacacaggtcacaa 86  Q
    |||||||||||||||| | |||||||||||| ||||| ||||| ||| |   |||||||||| ||||||||||    
T  47635010 agatgaagtggtaatcaactgaaattaaacttacacataactgcgaggtcctggattcgaacccaggtcacaa 47635082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 45; Significance: 1e-16; HSPs: 31)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 15 - 90
Target Start/End: Complemental strand, 28817379 - 28817303
Alignment:
Q  15 agatgaagtggtaatcca-tgaaattaaactcacacacaactgtgagatttcggattcgaacacaggtcacaacgtc 90  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||||||  ||| ||||||| | ||||||||||||    
T  28817379 agatgaagtggtaatccactgaaaataaactcacacacaactgtgagatcccgggttcgaacccgggtcacaacgtc 28817303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 15 - 90
Target Start/End: Complemental strand, 32333237 - 32333161
Alignment:
Q  15 agatgaagtggtaatcca-tgaaattaaactcacacacaactgtgagatttcggattcgaacacaggtcacaacgtc 90  Q
    |||||||||||||||||| ||||| |||||||||||||||||||||| |  ||| ||||||| | ||||||||||||    
T  32333237 agatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcacaacgtc 32333161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 15 - 90
Target Start/End: Original strand, 35779502 - 35779578
Alignment:
Q  15 agatgaagtggtaatcca-tgaaattaaactcacacacaactgtgagatttcggattcgaacacaggtcacaacgtc 90  Q
    |||||||||||||||||| ||||| |||||||||||||||||||||| |  ||| ||||||| | ||||||||||||    
T  35779502 agatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcacaacgtc 35779578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 15 - 74
Target Start/End: Complemental strand, 40932832 - 40932772
Alignment:
Q  15 agatgaagtggtaatcca-tgaaattaaactcacacacaactgtgagatttcggattcgaa 74  Q
    |||||||||||||||| | | |||||||| |||||||||||||||||||||||||||||||    
T  40932832 agatgaagtggtaatctactaaaattaaagtcacacacaactgtgagatttcggattcgaa 40932772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 90
Target Start/End: Original strand, 41849237 - 41849312
Alignment:
Q  15 agatgaagtggtaatccatgaaattaaactcacacacaactgtgagatttcggattcgaacacaggtcacaacgtc 90  Q
    ||||||| ||||||||  |||||||||||||||||||||| ||||| || ||||||||||| ||| |||| |||||    
T  41849237 agatgaaatggtaatcactgaaattaaactcacacacaacagtgaggttccggattcgaacccagatcacgacgtc 41849312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 15 - 60
Target Start/End: Original strand, 31532130 - 31532176
Alignment:
Q  15 agatgaagtggtaatcca-tgaaattaaactcacacacaactgtgag 60  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||    
T  31532130 agatgaagtggtaatccactgaaattaaactcacacacaactgtgag 31532176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 15 - 75
Target Start/End: Original strand, 42192644 - 42192705
Alignment:
Q  15 agatgaagtggtaatcca-tgaaattaaactcacacacaactgtgagatttcggattcgaac 75  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||||||  ||| |||||||    
T  42192644 agatgaagtggtaatccactgaaaataaactcacacacaactgtgagatcccgggttcgaac 42192705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 15 - 75
Target Start/End: Complemental strand, 42885297 - 42885236
Alignment:
Q  15 agatgaagtggtaatcca-tgaaattaaactcacacacaactgtgagatttcggattcgaac 75  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||||||  ||| |||||||    
T  42885297 agatgaagtggtaatccactgaaaataaactcacacacaactgtgagatcccgggttcgaac 42885236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 15 - 90
Target Start/End: Original strand, 1345 - 1421
Alignment:
Q  15 agatgaagtggtaatcca-tgaaattaaactcacacacaactgtgagatttcggattcgaacacaggtcacaacgtc 90  Q
    |||||||||||||||||| ||||| |||||||||||||||||||||| |  ||| |||||||   ||||||||||||    
T  1345 agatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaaccagggtcacaacgtc 1421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 15 - 90
Target Start/End: Complemental strand, 7792784 - 7792708
Alignment:
Q  15 agatgaagtggtaatcca-tgaaattaaactcacacacaactgtgagatttcggattcgaacacaggtcacaacgtc 90  Q
    ||||||||| |||||||| ||||| ||||||||||||||||||||||||  ||| ||||||| |  |||||||||||    
T  7792784 agatgaagtagtaatccactgaaaataaactcacacacaactgtgagatcccgggttcgaacccgagtcacaacgtc 7792708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 60
Target Start/End: Original strand, 70528 - 70574
Alignment:
Q  15 agatgaagtggtaatcca-tgaaattaaactcacacacaactgtgag 60  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||||    
T  70528 agatgaagtggtaatccactgaaaataaactcacacacaactgtgag 70574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 60
Target Start/End: Original strand, 1078653 - 1078699
Alignment:
Q  15 agatgaagtggtaatcca-tgaaattaaactcacacacaactgtgag 60  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||||    
T  1078653 agatgaagtggtaatccactgaaaataaactcacacacaactgtgag 1078699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 60
Target Start/End: Original strand, 6602523 - 6602569
Alignment:
Q  15 agatgaagtggtaatcca-tgaaattaaactcacacacaactgtgag 60  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||||    
T  6602523 agatgaagtggtaatccactgaaaataaactcacacacaactgtgag 6602569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 60
Target Start/End: Original strand, 6677976 - 6678022
Alignment:
Q  15 agatgaagtggtaatcca-tgaaattaaactcacacacaactgtgag 60  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||||    
T  6677976 agatgaagtggtaatccactgaaaataaactcacacacaactgtgag 6678022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 60
Target Start/End: Complemental strand, 7813445 - 7813399
Alignment:
Q  15 agatgaagtggtaatcca-tgaaattaaactcacacacaactgtgag 60  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||||    
T  7813445 agatgaagtggtaatccactgaaaataaactcacacacaactgtgag 7813399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 33 - 71
Target Start/End: Original strand, 42364726 - 42364764
Alignment:
Q  33 tgaaattaaactcacacacaactgtgagatttcggattc 71  Q
    ||||||||||||||||||||||||||| |||||||||||    
T  42364726 tgaaattaaactcacacacaactgtgaaatttcggattc 42364764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 15 - 59
Target Start/End: Complemental strand, 9292141 - 9292096
Alignment:
Q  15 agatgaagtggtaatcca-tgaaattaaactcacacacaactgtga 59  Q
    |||||||||||||||||| ||||| |||||||||||||||||||||    
T  9292141 agatgaagtggtaatccactgaaaataaactcacacacaactgtga 9292096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 90
Target Start/End: Complemental strand, 3822515 - 3822443
Alignment:
Q  19 gaagtggtaatcca-tgaaattaaactcacacacaactgtgagatttcggattcgaacacaggtcacaacgtc 90  Q
    ||||||||||| || | ||||||||||||||||||||||||||||   || ||||||| | ||||||||||||    
T  3822515 gaagtggtaattcactaaaattaaactcacacacaactgtgagatcctgggttcgaacccgggtcacaacgtc 3822443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 75
Target Start/End: Original strand, 7403700 - 7403760
Alignment:
Q  15 agatgaagtggtaatccatgaaattaaactcacacacaactgtgagatttcggattcgaac 75  Q
    ||||||||||||||||  ||||||||| |||||| ||||||||||  | ||||||||||||    
T  7403700 agatgaagtggtaatcactgaaattaagctcacaaacaactgtgatgtctcggattcgaac 7403760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 62
Target Start/End: Complemental strand, 20269653 - 20269605
Alignment:
Q  15 agatgaagtggtaatccat-gaaattaaactcacacacaactgtgagat 62  Q
    ||||||| ||||||||||| |||| ||||||||||||||||||||||||    
T  20269653 agatgaaatggtaatccattgaaaataaactcacacacaactgtgagat 20269605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 62
Target Start/End: Complemental strand, 21056282 - 21056234
Alignment:
Q  15 agatgaagtggtaatccat-gaaattaaactcacacacaactgtgagat 62  Q
    ||||||| ||||||||||| |||| ||||||||||||||||||||||||    
T  21056282 agatgaaatggtaatccattgaaaataaactcacacacaactgtgagat 21056234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 62
Target Start/End: Complemental strand, 29425474 - 29425426
Alignment:
Q  15 agatgaagtggtaatcca-tgaaattaaactcacacacaactgtgagat 62  Q
    |||||||||||||||||| ||||||||||||||||||||| || |||||    
T  29425474 agatgaagtggtaatccactgaaattaaactcacacacaattgcgagat 29425426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 15 - 60
Target Start/End: Complemental strand, 39303433 - 39303386
Alignment:
Q  15 agatgaagtggtaatcca-tgaaattaaa-ctcacacacaactgtgag 60  Q
    |||||||||||||||||| |||||||||| ||||||||||||||||||    
T  39303433 agatgaagtggtaatccactgaaattaaaactcacacacaactgtgag 39303386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 60
Target Start/End: Original strand, 4530987 - 4531033
Alignment:
Q  15 agatgaagtggtaatcca-tgaaattaaactcacacacaactgtgag 60  Q
    |||||||||||||| ||| |||||||||||||||||||| |||||||    
T  4530987 agatgaagtggtaaaccactgaaattaaactcacacacagctgtgag 4531033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 84
Target Start/End: Original strand, 9775047 - 9775117
Alignment:
Q  15 agatgaagtggtaatccatg-aaattaaactcacacacaactgtgagatttcggattcgaacacaggtcac 84  Q
    ||||||||| |||||||||  |||||||||||||||| ||||||||| || ||| ||||||| ||| ||||    
T  9775047 agatgaagttgtaatccattcaaattaaactcacacataactgtgaggttccgggttcgaacccagatcac 9775117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 60
Target Start/End: Complemental strand, 13891213 - 13891167
Alignment:
Q  15 agatgaagtggtaatcca-tgaaattaaactcacacacaactgtgag 60  Q
    |||||||||||||| ||| ||||| ||||||||||||||||||||||    
T  13891213 agatgaagtggtaaaccactgaaaataaactcacacacaactgtgag 13891167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 60
Target Start/End: Original strand, 31695274 - 31695320
Alignment:
Q  15 agatgaagtggtaatccat-gaaattaaactcacacacaactgtgag 60  Q
    |||||||||||||| |||| |||||||||||||||||||| ||||||    
T  31695274 agatgaagtggtaaaccattgaaattaaactcacacacaattgtgag 31695320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 60
Target Start/End: Original strand, 45264649 - 45264691
Alignment:
Q  19 gaagtggtaatcca-tgaaattaaactcacacacaactgtgag 60  Q
    |||||||||||||| |||||||||||||||||| |||||||||    
T  45264649 gaagtggtaatccactgaaattaaactcacacaaaactgtgag 45264691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 75
Target Start/End: Complemental strand, 39435405 - 39435344
Alignment:
Q  15 agatgaagtggtaatccatg-aaattaaactcacacacaactgtgagatttcggattcgaac 75  Q
    ||||||||| ||||||||   |||||||||||||||||||||||||| | |||| |||||||    
T  39435405 agatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtctcgggttcgaac 39435344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 74
Target Start/End: Original strand, 41753004 - 41753045
Alignment:
Q  33 tgaaattaaactcacacacaactgtgagatttcggattcgaa 74  Q
    |||||||||||| ||||||||||||||||||| || ||||||    
T  41753004 tgaaattaaacttacacacaactgtgagattttgggttcgaa 41753045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 17 - 60
Target Start/End: Complemental strand, 5385459 - 5385415
Alignment:
Q  17 atgaagtggtaatcca-tgaaattaaactcacacacaactgtgag 60  Q
    ||||||||||||  || ||||||||||||||||||||||||||||    
T  5385459 atgaagtggtaaatcactgaaattaaactcacacacaactgtgag 5385415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 45; Significance: 1e-16; HSPs: 23)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 15 - 90
Target Start/End: Complemental strand, 35945920 - 35945844
Alignment:
Q  15 agatgaagtggtaatcca-tgaaattaaactcacacacaactgtgagatttcggattcgaacacaggtcacaacgtc 90  Q
    |||||||||||||||||| ||||| |||| ||||||||||||||||| || ||| ||||||| ||||||||||||||    
T  35945920 agatgaagtggtaatccactgaaaataaattcacacacaactgtgaggttccgggttcgaacccaggtcacaacgtc 35945844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 15 - 90
Target Start/End: Complemental strand, 28455997 - 28455921
Alignment:
Q  15 agatgaagtggtaatcca-tgaaattaaactcacacacaactgtgagatttcggattcgaacacaggtcacaacgtc 90  Q
    |||||||||||||||||| ||||| |||||||||||||||||||||| |  ||| ||||||| | ||||||||||||    
T  28455997 agatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcacaacgtc 28455921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 15 - 90
Target Start/End: Complemental strand, 48660145 - 48660069
Alignment:
Q  15 agatgaagtggtaatcca-tgaaattaaactcacacacaactgtgagatttcggattcgaacacaggtcacaacgtc 90  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||||||  ||| ||||||| | ||||| ||||||    
T  48660145 agatgaagtggtaatccactgaaaataaactcacacacaactgtgagatcccgggttcgaacccgggtcataacgtc 48660069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 15 - 60
Target Start/End: Complemental strand, 13109893 - 13109847
Alignment:
Q  15 agatgaagtggtaatcca-tgaaattaaactcacacacaactgtgag 60  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||    
T  13109893 agatgaagtggtaatccactgaaattaaactcacacacaactgtgag 13109847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 15 - 91
Target Start/End: Complemental strand, 7059590 - 7059513
Alignment:
Q  15 agatgaagtggtaatcca-tgaaattaaactcacacacaactgtgagatttcggattcgaacacaggtcacaacgtct 91  Q
    |||| ||||||||||||| | |||||||||||||||||||||||||| | || ||||||||| | |||||| ||||||    
T  7059590 agataaagtggtaatccacttaaattaaactcacacacaactgtgaggtctcagattcgaacccgggtcacgacgtct 7059513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 15 - 75
Target Start/End: Complemental strand, 41808325 - 41808264
Alignment:
Q  15 agatgaagtggtaatcca-tgaaattaaactcacacacaactgtgagatttcggattcgaac 75  Q
    |||||||||||||||||| ||||| |||||||||||||||||||||| || ||| |||||||    
T  41808325 agatgaagtggtaatccactgaaaataaactcacacacaactgtgaggttccgggttcgaac 41808264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 16 - 90
Target Start/End: Original strand, 41761417 - 41761492
Alignment:
Q  16 gatgaagtggtaatcca-tgaaattaaactcacacacaactgtgagatttcggattcgaacacaggtcacaacgtc 90  Q
    ||||||||||||||||| ||||| |||||||||||||||||||||| |   || ||||||| | ||||||||||||    
T  41761417 gatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcctgggttcgaacccgggtcacaacgtc 41761492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 60
Target Start/End: Original strand, 5055793 - 5055839
Alignment:
Q  15 agatgaagtggtaatcca-tgaaattaaactcacacacaactgtgag 60  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||||    
T  5055793 agatgaagtggtaatccactgaaaataaactcacacacaactgtgag 5055839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 60
Target Start/End: Complemental strand, 32007197 - 32007151
Alignment:
Q  15 agatgaagtggtaatcca-tgaaattaaactcacacacaactgtgag 60  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||||    
T  32007197 agatgaagtggtaatccactgaaaataaactcacacacaactgtgag 32007151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 17 - 90
Target Start/End: Complemental strand, 39276471 - 39276397
Alignment:
Q  17 atgaagtggtaatcca-tgaaattaaactcacacacaactgtgagatttcggattcgaacacaggtcacaacgtc 90  Q
    |||||||||||||||| ||||| |||||||||||| ||||||||| |  ||| ||||||| | ||||||||||||    
T  39276471 atgaagtggtaatccactgaaaataaactcacacataactgtgaggtcccgggttcgaacccgggtcacaacgtc 39276397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 60
Target Start/End: Original strand, 41039308 - 41039354
Alignment:
Q  15 agatgaagtggtaatcca-tgaaattaaactcacacacaactgtgag 60  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||||    
T  41039308 agatgaagtggtaatccactgaaaataaactcacacacaactgtgag 41039354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 60
Target Start/End: Original strand, 45813016 - 45813062
Alignment:
Q  15 agatgaagtggtaatcca-tgaaattaaactcacacacaactgtgag 60  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||||    
T  45813016 agatgaagtggtaatccactgaaaataaactcacacacaactgtgag 45813062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 15 - 75
Target Start/End: Original strand, 29994388 - 29994449
Alignment:
Q  15 agatgaagtggtaatcca-tgaaattaaactcacacacaactgtgagatttcggattcgaac 75  Q
    |||||||||||||| ||| ||||||||||||||||||||| |||||| | |||| |||||||    
T  29994388 agatgaagtggtaaaccactgaaattaaactcacacacaattgtgaggtctcgggttcgaac 29994449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 90
Target Start/End: Complemental strand, 192538 - 192462
Alignment:
Q  15 agatgaagtggtaatcca-tgaaattaaactcacacacaactgtgagatttcggattcgaacacaggtcacaacgtc 90  Q
    |||||||||||||||||  ||||| |||||||||||||||||||||| |   || ||||||||| | ||||||||||    
T  192538 agatgaagtggtaatccgctgaaaataaactcacacacaactgtgaggtcctgggttcgaacacggatcacaacgtc 192462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 90
Target Start/End: Complemental strand, 26032924 - 26032848
Alignment:
Q  15 agatgaagtggtaatcca-tgaaattaaactcacacacaactgtgagatttcggattcgaacacaggtcacaacgtc 90  Q
    |||||||| ||||||||| |||||||||||||||||| ||||||||| || | | ||||||| | |||||| |||||    
T  26032924 agatgaagcggtaatccactgaaattaaactcacacaaaactgtgaggttccaggttcgaacccgggtcacgacgtc 26032848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 74
Target Start/End: Original strand, 26264541 - 26264601
Alignment:
Q  15 agatgaagtggtaatccat-gaaattaaactcacacacaactgtgagatttcggattcgaa 74  Q
    |||||||||| |||| ||| ||||||||||||||||||||||||||| |||| | ||||||    
T  26264541 agatgaagtgataatacattgaaattaaactcacacacaactgtgaggtttcaggttcgaa 26264601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 60
Target Start/End: Complemental strand, 20871 - 20825
Alignment:
Q  15 agatgaagtggtaatcca-tgaaattaaactcacacacaactgtgag 60  Q
    |||||||||||||||||| | ||| ||||||||||||||||||||||    
T  20871 agatgaagtggtaatccactaaaaataaactcacacacaactgtgag 20825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 60
Target Start/End: Complemental strand, 5943804 - 5943758
Alignment:
Q  15 agatgaagtggtaatccat-gaaattaaactcacacacaactgtgag 60  Q
    |||||||||| |||||||| ||||||||||||||| |||||||||||    
T  5943804 agatgaagtgataatccattgaaattaaactcacaaacaactgtgag 5943758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 60
Target Start/End: Complemental strand, 13097427 - 13097381
Alignment:
Q  15 agatgaagtggtaatcca-tgaaattaaactcacacacaactgtgag 60  Q
    |||||||||||||||||| | |||||||||||||| |||||||||||    
T  13097427 agatgaagtggtaatccaataaaattaaactcacatacaactgtgag 13097381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 59
Target Start/End: Complemental strand, 7275804 - 7275759
Alignment:
Q  15 agatgaagtggtaatcca-tgaaattaaactcacacacaactgtga 59  Q
    |||||||||||||| ||| |||||||||||||| ||||||||||||    
T  7275804 agatgaagtggtaaaccactgaaattaaactcatacacaactgtga 7275759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 59
Target Start/End: Original strand, 25931162 - 25931207
Alignment:
Q  15 agatgaagtggtaatccat-gaaattaaactcacacacaactgtga 59  Q
    |||||||||||||||| || |||||||||||||||||||| |||||    
T  25931162 agatgaagtggtaatctattgaaattaaactcacacacaattgtga 25931207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 75
Target Start/End: Complemental strand, 49783830 - 49783769
Alignment:
Q  15 agatgaagtggtaatcca-tgaaattaaactcacacacaactgtgagatttcggattcgaac 75  Q
    |||||||||||||| ||| |||||||||| ||||| ||||||||||| || ||| |||||||    
T  49783830 agatgaagtggtaaaccactgaaattaaattcacatacaactgtgaggttccgggttcgaac 49783769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 16 - 55
Target Start/End: Complemental strand, 11688385 - 11688345
Alignment:
Q  16 gatgaagtggtaatcca-tgaaattaaactcacacacaact 55  Q
    ||||||||||||||||| ||||| |||||||||||||||||    
T  11688385 gatgaagtggtaatccactgaaaataaactcacacacaact 11688345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 15 - 90
Target Start/End: Complemental strand, 56604 - 56528
Alignment:
Q  15 agatgaagtggtaatcca-tgaaattaaactcacacacaactgtgagatttcggattcgaacacaggtcacaacgtc 90  Q
    |||||||||||||||||| ||||| |||||||||||||||||||||| |  ||| ||||||| | ||||||||||||    
T  56604 agatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcacaacgtc 56528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 15 - 62
Target Start/End: Complemental strand, 11355946 - 11355898
Alignment:
Q  15 agatgaagtggtaatcca-tgaaattaaactcacacacaactgtgagat 62  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||    
T  11355946 agatgaagtggtaatccactgaaattaaactcacacacaactgtgagat 11355898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 15 - 90
Target Start/End: Complemental strand, 44084063 - 44083987
Alignment:
Q  15 agatgaagtggtaatcca-tgaaattaaactcacacacaactgtgagatttcggattcgaacacaggtcacaacgtc 90  Q
    |||||||||||||||||| ||||| |||||||||||||||||||||| |  ||| ||||||| | ||||||||||||    
T  44084063 agatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcacaacgtc 44083987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 17 - 85
Target Start/End: Original strand, 5772826 - 5772895
Alignment:
Q  17 atgaagtggtaatcca-tgaaattaaactcacacacaactgtgagatttcggattcgaacacaggtcaca 85  Q
    |||||||||||| ||| |||||||||||||||||||||||||||| |||||  ||||||| | |||||||    
T  5772826 atgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtttcgagttcgaacccgggtcaca 5772895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 15 - 75
Target Start/End: Original strand, 25546280 - 25546341
Alignment:
Q  15 agatgaagtggtaatcca-tgaaattaaactcacacacaactgtgagatttcggattcgaac 75  Q
    |||||||||||||| ||| |||||||||||||||||||||||||||| |  |||||||||||    
T  25546280 agatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccggattcgaac 25546341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 15 - 75
Target Start/End: Original strand, 31288229 - 31288290
Alignment:
Q  15 agatgaagtggtaatcca-tgaaattaaactcacacacaactgtgagatttcggattcgaac 75  Q
    |||||||||||||| ||| |||||||||||| |||||||||||||||||| | |||||||||    
T  31288229 agatgaagtggtaaaccactgaaattaaacttacacacaactgtgagattccagattcgaac 31288290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 15 - 90
Target Start/End: Original strand, 43753758 - 43753835
Alignment:
Q  15 agatgaagtggtaatcca-tgaaattaaa-ctcacacacaactgtgagatttcggattcgaacacaggtcacaacgtc 90  Q
    |||||||||||||||||| |||||||||| |||||| ||||||||||| || ||| ||||||| |||||||| |||||    
T  43753758 agatgaagtggtaatccactgaaattaaaactcacatacaactgtgaggttccgggttcgaacccaggtcacgacgtc 43753835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 15 - 75
Target Start/End: Original strand, 47570723 - 47570784
Alignment:
Q  15 agatgaagtggtaatcca-tgaaattaaactcacacacaactgtgagatttcggattcgaac 75  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||||||  ||| |||||||    
T  47570723 agatgaagtggtaatccactgaaaataaactcacacacaactgtgagatcccgggttcgaac 47570784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 15 - 90
Target Start/End: Complemental strand, 2146759 - 2146683
Alignment:
Q  15 agatgaagtggtaatcca-tgaaattaaactcacacacaactgtgagatttcggattcgaacacaggtcacaacgtc 90  Q
    |||||||||||||||||| ||||| ||||| |||||||||||||||| | | || ||||||| | ||||||||||||    
T  2146759 agatgaagtggtaatccactgaaaataaacccacacacaactgtgaggtcttgggttcgaacccgggtcacaacgtc 2146683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 15 - 90
Target Start/End: Complemental strand, 40058361 - 40058285
Alignment:
Q  15 agatgaagtggtaatcca-tgaaattaaactcacacacaactgtgagatttcggattcgaacacaggtcacaacgtc 90  Q
    |||||||||||||||||| ||||| |||||||| ||||||||||||| |  ||| ||||||| | ||||||||||||    
T  40058361 agatgaagtggtaatccactgaaaataaactcatacacaactgtgaggtcccgggttcgaacccgggtcacaacgtc 40058285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 17 - 90
Target Start/End: Original strand, 27229484 - 27229559
Alignment:
Q  17 atgaagtggtaatcca-tgaaattaaa-ctcacacacaactgtgagatttcggattcgaacacaggtcacaacgtc 90  Q
    |||||||||||||||| |||||||||| |||||||||||||||||| |  ||| ||||||| |||||||| |||||    
T  27229484 atgaagtggtaatccactgaaattaaaactcacacacaactgtgaggtcccgggttcgaacccaggtcacgacgtc 27229559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 60
Target Start/End: Complemental strand, 4106861 - 4106815
Alignment:
Q  15 agatgaagtggtaatcca-tgaaattaaactcacacacaactgtgag 60  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||||    
T  4106861 agatgaagtggtaatccactgaaaataaactcacacacaactgtgag 4106815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 60
Target Start/End: Complemental strand, 4107432 - 4107386
Alignment:
Q  15 agatgaagtggtaatcca-tgaaattaaactcacacacaactgtgag 60  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||||    
T  4107432 agatgaagtggtaatccactgaaaataaactcacacacaactgtgag 4107386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 33 - 75
Target Start/End: Original strand, 10220496 - 10220538
Alignment:
Q  33 tgaaattaaactcacacacaactgtgagatttcggattcgaac 75  Q
    |||||||||||||||||| ||||||||| ||||||||||||||    
T  10220496 tgaaattaaactcacacaaaactgtgaggtttcggattcgaac 10220538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 64
Target Start/End: Original strand, 19630673 - 19630723
Alignment:
Q  15 agatgaagtggtaatcca-tgaaattaaactcacacacaactgtgagattt 64  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||| ||||    
T  19630673 agatgaagtggtaatccactgaaaataaactcacacacaactgtgatattt 19630723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 60
Target Start/End: Complemental strand, 23358308 - 23358262
Alignment:
Q  15 agatgaagtggtaatcca-tgaaattaaactcacacacaactgtgag 60  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||||    
T  23358308 agatgaagtggtaatccactgaaaataaactcacacacaactgtgag 23358262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 60
Target Start/End: Original strand, 31770537 - 31770583
Alignment:
Q  15 agatgaagtggtaatcca-tgaaattaaactcacacacaactgtgag 60  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||||    
T  31770537 agatgaagtggtaatccactgaaaataaactcacacacaactgtgag 31770583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 60
Target Start/End: Original strand, 38781213 - 38781259
Alignment:
Q  15 agatgaagtggtaatcca-tgaaattaaactcacacacaactgtgag 60  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||||    
T  38781213 agatgaagtggtaatccactgaaaataaactcacacacaactgtgag 38781259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 74
Target Start/End: Complemental strand, 46427477 - 46427423
Alignment:
Q  20 aagtggtaatccatgaaattaaactcacacacaactgtgagatttcggattcgaa 74  Q
    ||||||||| |  |||||||||||||||||||||||||||| || ||||||||||    
T  46427477 aagtggtaaacactgaaattaaactcacacacaactgtgaggttccggattcgaa 46427423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 15 - 83
Target Start/End: Original strand, 25112252 - 25112321
Alignment:
Q  15 agatgaagtggtaatcca-tgaaattaaactcacacacaactgtgagatttcggattcgaacacaggtca 83  Q
    |||||||||||||||||| ||||| ||||| |||||||||||||||| |  ||| ||||||| |||||||    
T  25112252 agatgaagtggtaatccactgaaaataaacccacacacaactgtgaggtcccgggttcgaacccaggtca 25112321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 20 - 60
Target Start/End: Complemental strand, 34763560 - 34763519
Alignment:
Q  20 aagtggtaatcca-tgaaattaaactcacacacaactgtgag 60  Q
    ||||||||||||| ||||||||||||||||||||||||||||    
T  34763560 aagtggtaatccactgaaattaaactcacacacaactgtgag 34763519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 15 - 75
Target Start/End: Complemental strand, 47557904 - 47557843
Alignment:
Q  15 agatgaagtggtaatcca-tgaaattaaactcacacacaactgtgagatttcggattcgaac 75  Q
    |||||||||||||| ||| |||||||||||||||| ||||||||||| || ||| |||||||    
T  47557904 agatgaagtggtaaaccactgaaattaaactcacatacaactgtgaggttccgggttcgaac 47557843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 62
Target Start/End: Original strand, 5462955 - 5463003
Alignment:
Q  15 agatgaagtggtaatccat-gaaattaaactcacacacaactgtgagat 62  Q
    ||||||||||||  ||||| |||||||||||||||||||||||||||||    
T  5462955 agatgaagtggttctccattgaaattaaactcacacacaactgtgagat 5463003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 62
Target Start/End: Original strand, 27915585 - 27915633
Alignment:
Q  15 agatgaagtggtaatccat-gaaattaaactcacacacaactgtgagat 62  Q
    ||||||||||||||| ||| ||||||||||||| |||||||||||||||    
T  27915585 agatgaagtggtaattcattgaaattaaactcatacacaactgtgagat 27915633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 90
Target Start/End: Complemental strand, 28603134 - 28603058
Alignment:
Q  15 agatgaagtggtaatcca-tgaaattaaactcacacacaactgtgagatttcggattcgaacacaggtcacaacgtc 90  Q
    |||||||||||||||||| ||| |||||||||||| |||| |||||  | |||| ||||||| |||||||| |||||    
T  28603134 agatgaagtggtaatccactgagattaaactcacatacaattgtgaagtctcgggttcgaactcaggtcacgacgtc 28603058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 60
Target Start/End: Complemental strand, 8439201 - 8439155
Alignment:
Q  15 agatgaagtggtaatcca-tgaaattaaactcacacacaactgtgag 60  Q
    |||||||||||||||||| ||||| |||| |||||||||||||||||    
T  8439201 agatgaagtggtaatccactgaaaataaattcacacacaactgtgag 8439155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 60
Target Start/End: Complemental strand, 38033852 - 38033806
Alignment:
Q  15 agatgaagtggtaatcca-tgaaattaaactcacacacaactgtgag 60  Q
    ||||||||||||| |||| ||||| ||||||||||||||||||||||    
T  38033852 agatgaagtggtactccactgaaaataaactcacacacaactgtgag 38033806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 60
Target Start/End: Complemental strand, 48146876 - 48146830
Alignment:
Q  15 agatgaagtggtaatcca-tgaaattaaactcacacacaactgtgag 60  Q
    |||||||||||||||||| ||||| | ||||||||||||||||||||    
T  48146876 agatgaagtggtaatccaatgaaaattaactcacacacaactgtgag 48146830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 59
Target Start/End: Original strand, 15634884 - 15634929
Alignment:
Q  15 agatgaagtggtaatcca-tgaaattaaactcacacacaactgtga 59  Q
    |||||||||||||||| | ||||| |||||||||||||||||||||    
T  15634884 agatgaagtggtaatctactgaaaataaactcacacacaactgtga 15634929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 83
Target Start/End: Complemental strand, 35309977 - 35309908
Alignment:
Q  15 agatgaagtggtaatcca-tgaaattaaactcacacacaactgtgagatttcggattcgaacacaggtca 83  Q
    |||||||||| ||| ||| ||||||||||||| ||||||| ||||||||  ||||||||||  |||||||    
T  35309977 agatgaagtgataaaccactgaaattaaactcgcacacaattgtgagatcccggattcgaaaccaggtca 35309908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 83
Target Start/End: Complemental strand, 41183938 - 41183869
Alignment:
Q  15 agatgaagtggtaatcca-tgaaattaaactcacacacaactgtgagatttcggattcgaacacaggtca 83  Q
    |||||||||| ||||||| ||||| |||||||||||| ||||||||| | | || ||||||| |||||||    
T  41183938 agatgaagtgataatccactgaaaataaactcacacataactgtgaggtattgggttcgaacccaggtca 41183869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 55
Target Start/End: Original strand, 47250256 - 47250297
Alignment:
Q  15 agatgaagtggtaatcca-tgaaattaaactcacacacaact 55  Q
    |||||||||||||||||| ||||| |||||||||||||||||    
T  47250256 agatgaagtggtaatccactgaaaataaactcacacacaact 47250297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 59
Target Start/End: Original strand, 48444157 - 48444202
Alignment:
Q  15 agatgaagtggtaatcca-tgaaattaaactcacacacaactgtga 59  Q
    ||||||||||||||| || |||||||||||| ||||||||||||||    
T  48444157 agatgaagtggtaattcactgaaattaaacttacacacaactgtga 48444202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 15 - 90
Target Start/End: Original strand, 39513988 - 39514064
Alignment:
Q  15 agatgaagtggtaatccat-gaaattaaactcacacacaactgtgagatttcggattcgaacacaggtcacaacgtc 90  Q
    ||||||||||||||||||  ||||||||||||||||| |||||| || |  ||| ||||||| | |||||| |||||    
T  39513988 agatgaagtggtaatccaccgaaattaaactcacacataactgtaaggtcccgggttcgaactcgggtcacgacgtc 39514064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 15)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 15 - 90
Target Start/End: Complemental strand, 21018346 - 21018270
Alignment:
Q  15 agatgaagtggtaatcca-tgaaattaaactcacacacaactgtgagatttcggattcgaacacaggtcacaacgtc 90  Q
    |||||||||||||||||| ||||| |||||||||||||||||||||| |  ||| ||||||| | ||||||||||||    
T  21018346 agatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcacaacgtc 21018270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 15 - 91
Target Start/End: Complemental strand, 2971107 - 2971030
Alignment:
Q  15 agatgaagtggtaatccat-gaaattaaactcacacacaactgtgagatttcggattcgaacacaggtcacaacgtct 91  Q
    ||||||||||||||||||  |||| |||||||||||||||||||||| | || | ||||||| | |||||||||||||    
T  2971107 agatgaagtggtaatccaccgaaaataaactcacacacaactgtgaggtctcaggttcgaacccgggtcacaacgtct 2971030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 15 - 75
Target Start/End: Original strand, 41580080 - 41580141
Alignment:
Q  15 agatgaagtggtaatccatgaaa-ttaaactcacacacaactgtgagatttcggattcgaac 75  Q
    ||||||||||||||||||| ||| ||||||  ||||||||||||||| ||||||||||||||    
T  41580080 agatgaagtggtaatccattaaaattaaacctacacacaactgtgaggtttcggattcgaac 41580141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 15 - 90
Target Start/End: Original strand, 35317702 - 35317778
Alignment:
Q  15 agatgaagtggtaatcca-tgaaattaaactcacacacaactgtgagatttcggattcgaacacaggtcacaacgtc 90  Q
    |||||||||||||||||| ||||| |||||||||||||||||||||| |  ||| ||||| | ||||||| ||||||    
T  35317702 agatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaccccaggtcataacgtc 35317778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 60
Target Start/End: Original strand, 4824944 - 4824990
Alignment:
Q  15 agatgaagtggtaatccat-gaaattaaactcacacacaactgtgag 60  Q
    ||||||||||||||||||| |||| ||||||||||||||||||||||    
T  4824944 agatgaagtggtaatccattgaaaataaactcacacacaactgtgag 4824990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 60
Target Start/End: Complemental strand, 29265998 - 29265952
Alignment:
Q  15 agatgaagtggtaatcca-tgaaattaaactcacacacaactgtgag 60  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||||    
T  29265998 agatgaagtggtaatccactgaaaataaactcacacacaactgtgag 29265952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 60
Target Start/End: Original strand, 31909390 - 31909436
Alignment:
Q  15 agatgaagtggtaatcca-tgaaattaaactcacacacaactgtgag 60  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||||    
T  31909390 agatgaagtggtaatccactgaaaataaactcacacacaactgtgag 31909436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 60
Target Start/End: Original strand, 32143419 - 32143465
Alignment:
Q  15 agatgaagtggtaatcca-tgaaattaaactcacacacaactgtgag 60  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||||    
T  32143419 agatgaagtggtaatccactgaaaataaactcacacacaactgtgag 32143465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 15 - 91
Target Start/End: Complemental strand, 12257479 - 12257402
Alignment:
Q  15 agatgaagtggtaatcca-tgaaattaaactcacacacaactgtgagatttcggattcgaacacaggtcacaacgtct 91  Q
    |||||||||||||||||| ||||| ||||||||||||||| | |||| |   || ||||||| |||||||||||||||    
T  12257479 agatgaagtggtaatccactgaaaataaactcacacacaattatgaggtcctgggttcgaacccaggtcacaacgtct 12257402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 90
Target Start/End: Complemental strand, 13204080 - 13204004
Alignment:
Q  15 agatgaagtggtaatcca-tgaaattaaactcacacacaactgtgagatttcggattcgaacacaggtcacaacgtc 90  Q
    |||||||||||||||||| ||||| |||||||||||| ||||||||| |  ||| ||||||| | |||||| |||||    
T  13204080 agatgaagtggtaatccactgaaaataaactcacacataactgtgaggtcccgggttcgaacccgggtcacgacgtc 13204004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 90
Target Start/End: Complemental strand, 40177747 - 40177671
Alignment:
Q  15 agatgaagtggtaatcca-tgaaattaaactcacacacaactgtgagatttcggattcgaacacaggtcacaacgtc 90  Q
    |||||||||||||||||| ||||| |||||||||||||||| ||||  || ||| || |||  ||||||||||||||    
T  40177747 agatgaagtggtaatccactgaaaataaactcacacacaacggtgaagttccgggttggaatccaggtcacaacgtc 40177671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 15 - 57
Target Start/End: Complemental strand, 23262667 - 23262624
Alignment:
Q  15 agatgaagtggtaatcca-tgaaattaaactcacacacaactgt 57  Q
    |||||||||||||||||| ||||| |||||||||||||||||||    
T  23262667 agatgaagtggtaatccactgaaaataaactcacacacaactgt 23262624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 60
Target Start/End: Complemental strand, 2786393 - 2786348
Alignment:
Q  15 agatgaagtggtaatccatgaaattaaactcacacacaactgtgag 60  Q
    ||||||||||||||||||   ||||||||||| |||||||||||||    
T  2786393 agatgaagtggtaatccactgaattaaactcatacacaactgtgag 2786348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 75
Target Start/End: Original strand, 17984747 - 17984808
Alignment:
Q  15 agatgaagtggtaatcca-tgaaattaaactcacacacaactgtgagatttcggattcgaac 75  Q
    |||||||||| ||| ||| | |||||||||||||||||||||||||| || ||| |||||||    
T  17984747 agatgaagtgataagccactaaaattaaactcacacacaactgtgaggttccgggttcgaac 17984808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 15 - 90
Target Start/End: Complemental strand, 6021115 - 6021039
Alignment:
Q  15 agatgaagtggtaatcca-tgaaattaaactcacacacaactgtgagatttcggattcgaacacaggtcacaacgtc 90  Q
    |||| ||||||||||||| ||||| |||||||||||||||||| ||| |  ||| ||||||  | ||||||||||||    
T  6021115 agataaagtggtaatccactgaaaataaactcacacacaactgagaggtcccgggttcgaatccgggtcacaacgtc 6021039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 20)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 15 - 90
Target Start/End: Complemental strand, 23839982 - 23839906
Alignment:
Q  15 agatgaagtggtaatcca-tgaaattaaactcacacacaactgtgagatttcggattcgaacacaggtcacaacgtc 90  Q
    |||||||||||||||||| ||||| |||||||||||||||||||||| |  | | ||||||| ||||||||||||||    
T  23839982 agatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccaggttcgaacccaggtcacaacgtc 23839906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 15 - 90
Target Start/End: Complemental strand, 34460492 - 34460416
Alignment:
Q  15 agatgaagtggtaatcca-tgaaattaaactcacacacaactgtgagatttcggattcgaacacaggtcacaacgtc 90  Q
    |||||||||||||||||| ||||| |||||||||||||||||||||| ||  || ||||||| | ||||||||||||    
T  34460492 agatgaagtggtaatccactgaaaataaactcacacacaactgtgaggttctgggttcgaacccgggtcacaacgtc 34460416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 15 - 90
Target Start/End: Original strand, 45125170 - 45125246
Alignment:
Q  15 agatgaagtggtaatcca-tgaaattaaactcacacacaactgtgagatttcggattcgaacacaggtcacaacgtc 90  Q
    |||||||||||||||||| ||||| |||||||||||||||||||||| || ||  ||||||| || |||||||||||    
T  45125170 agatgaagtggtaatccactgaaaataaactcacacacaactgtgaggttccgagttcgaacccaagtcacaacgtc 45125246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 15 - 90
Target Start/End: Original strand, 11816555 - 11816632
Alignment:
Q  15 agatgaagtggtaatcca-tgaaattaaa-ctcacacacaactgtgagatttcggattcgaacacaggtcacaacgtc 90  Q
    |||||||||||||||||| |||||||||| |||||| ||||||||||| || ||| ||||||| |||||||| |||||    
T  11816555 agatgaagtggtaatccactgaaattaaaactcacatacaactgtgaggttccgggttcgaacccaggtcacgacgtc 11816632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 15 - 90
Target Start/End: Complemental strand, 19537430 - 19537354
Alignment:
Q  15 agatgaagtggtaatcca-tgaaattaaactcacacacaactgtgagatttcggattcgaacacaggtcacaacgtc 90  Q
    |||||||||||||||||| ||||| ||||| |||||||||||||||| || ||| ||||||| | | ||||||||||    
T  19537430 agatgaagtggtaatccactgaaaataaacacacacacaactgtgaggttccgggttcgaacccggatcacaacgtc 19537354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 15 - 90
Target Start/End: Complemental strand, 26605747 - 26605671
Alignment:
Q  15 agatgaagtggtaatcca-tgaaattaaactcacacacaactgtgagatttcggattcgaacacaggtcacaacgtc 90  Q
    |||||||||||||||||| ||||| |||| ||||||||||||||||| |  ||| ||||||| | ||||||||||||    
T  26605747 agatgaagtggtaatccactgaaaataaattcacacacaactgtgaggtcccgggttcgaacccgggtcacaacgtc 26605671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 15 - 90
Target Start/End: Original strand, 37197615 - 37197691
Alignment:
Q  15 agatgaagtggtaatcca-tgaaattaaactcacacacaactgtgagatttcggattcgaacacaggtcacaacgtc 90  Q
    |||||||||||||||||| ||||| |||||||||||||||||||||| |  ||| ||||||| | |||||| |||||    
T  37197615 agatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcacgacgtc 37197691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 60
Target Start/End: Original strand, 10639611 - 10639657
Alignment:
Q  15 agatgaagtggtaatcca-tgaaattaaactcacacacaactgtgag 60  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||||    
T  10639611 agatgaagtggtaatccactgaaaataaactcacacacaactgtgag 10639657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 60
Target Start/End: Original strand, 29659223 - 29659269
Alignment:
Q  15 agatgaagtggtaatcca-tgaaattaaactcacacacaactgtgag 60  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||||    
T  29659223 agatgaagtggtaatccactgaaaataaactcacacacaactgtgag 29659269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 60
Target Start/End: Original strand, 33083559 - 33083605
Alignment:
Q  15 agatgaagtggtaatcca-tgaaattaaactcacacacaactgtgag 60  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||||    
T  33083559 agatgaagtggtaatccactgaaaataaactcacacacaactgtgag 33083605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 60
Target Start/End: Complemental strand, 42578291 - 42578245
Alignment:
Q  15 agatgaagtggtaatcca-tgaaattaaactcacacacaactgtgag 60  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||||    
T  42578291 agatgaagtggtaatccactgaaaataaactcacacacaactgtgag 42578245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 60
Target Start/End: Complemental strand, 4851442 - 4851397
Alignment:
Q  16 gatgaagtggtaatcca-tgaaattaaactcacacacaactgtgag 60  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||    
T  4851442 gatgaagtggtaatccactaaaattaaactcacacacaactgtgag 4851397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 15 - 59
Target Start/End: Original strand, 43778473 - 43778518
Alignment:
Q  15 agatgaagtggtaatcca-tgaaattaaactcacacacaactgtga 59  Q
    |||||||||||||||||| ||||| |||||||||||||||||||||    
T  43778473 agatgaagtggtaatccaatgaaaataaactcacacacaactgtga 43778518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 90
Target Start/End: Complemental strand, 11708801 - 11708725
Alignment:
Q  15 agatgaagtggtaatcca-tgaaattaaactcacacacaactgtgagatttcggattcgaacacaggtcacaacgtc 90  Q
    |||||||||||||||||| ||||| ||||| |||||||||||||||| |   || ||||||| | ||||||||||||    
T  11708801 agatgaagtggtaatccactgaaaataaacccacacacaactgtgaggtcctgggttcgaacccgggtcacaacgtc 11708725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 74
Target Start/End: Original strand, 44181892 - 44181952
Alignment:
Q  15 agatgaagtggtaatcca-tgaaattaaactcacacacaactgtgagatttcggattcgaa 74  Q
    |||| ||||| ||||||| ||||| ||||||||||||||||||||||||  ||||||||||    
T  44181892 agattaagtgataatccactgaaaataaactcacacacaactgtgagatcccggattcgaa 44181952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 60
Target Start/End: Complemental strand, 11459838 - 11459792
Alignment:
Q  15 agatgaagtggtaatccat-gaaattaaactcacacacaactgtgag 60  Q
    ||||||||||||||||||| |||| ||||| ||||||||||||||||    
T  11459838 agatgaagtggtaatccattgaaaataaacacacacacaactgtgag 11459792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 84
Target Start/End: Original strand, 27137923 - 27137993
Alignment:
Q  15 agatgaagtggtaatcca-tgaaattaaactcacacacaactgtgagatttcggattcgaacacaggtcac 84  Q
    |||||||||||||||||| |||||||||||||||| | |||||| || |  ||| ||||||| ||||||||    
T  27137923 agatgaagtggtaatccactgaaattaaactcacataaaactgtaaggtcccgggttcgaacccaggtcac 27137993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 60
Target Start/End: Original strand, 39831449 - 39831495
Alignment:
Q  15 agatgaagtggtaatcca-tgaaattaaactcacacacaactgtgag 60  Q
    |||||||||||||| ||| ||||||||||||||||||||| ||||||    
T  39831449 agatgaagtggtaaaccactgaaattaaactcacacacaattgtgag 39831495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 75
Target Start/End: Original strand, 40825163 - 40825224
Alignment:
Q  15 agatgaagtggtaatccat-gaaattaaactcacacacaactgtgagatttcggattcgaac 75  Q
    |||||||||| |||||||| |||| |||||||||||||| |||  |||| ||||||||||||    
T  40825163 agatgaagtgataatccattgaaaataaactcacacacacctggaagatctcggattcgaac 40825224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 15 - 90
Target Start/End: Complemental strand, 4800999 - 4800923
Alignment:
Q  15 agatgaagtggtaatcca-tgaaattaaactcacacacaactgtgagatttcggattcgaacacaggtcacaacgtc 90  Q
    ||||||||||||||| || || ||||||||||||||| ||| | ||| || ||| ||||||| |||||||| |||||    
T  4800999 agatgaagtggtaattcactggaattaaactcacacataaccgcgaggttccgggttcgaactcaggtcacgacgtc 4800923  T

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Target: chr6 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 11)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 10999416 - 10999471
Alignment:
Q  18 tgaagtggtaatcca-tgaaattaaactcacacacaactgtgagatttcggattcg 72  Q
    ||||||||||||||| |||||||||||||||| ||||||||||||||| |||||||    
T  10999416 tgaagtggtaatccactgaaattaaactcacatacaactgtgagattttggattcg 10999471  T

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Target: chr6; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 60
Target Start/End: Complemental strand, 4464250 - 4464204
Alignment:
Q  15 agatgaagtggtaatcca-tgaaattaaactcacacacaactgtgag 60  Q
    |||||||||||||| ||| ||||||||||||||||||||||||||||    
T  4464250 agatgaagtggtaaaccactgaaattaaactcacacacaactgtgag 4464204  T

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Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 60
Target Start/End: Complemental strand, 33621617 - 33621571
Alignment:
Q  15 agatgaagtggtaatcca-tgaaattaaactcacacacaactgtgag 60  Q
    |||||||||||||| ||| ||||||||||||||||||||||||||||    
T  33621617 agatgaagtggtaaaccactgaaattaaactcacacacaactgtgag 33621571  T

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Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 60
Target Start/End: Original strand, 35218645 - 35218691
Alignment:
Q  15 agatgaagtggtaatcca-tgaaattaaactcacacacaactgtgag 60  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||||    
T  35218645 agatgaagtggtaatccactgaaaataaactcacacacaactgtgag 35218691  T

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Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 15 - 75
Target Start/End: Complemental strand, 2959272 - 2959211
Alignment:
Q  15 agatgaagtggtaatccatg-aaattaaactcacacacaactgtgagatttcggattcgaac 75  Q
    ||||||||||||| |||| | |||||||||||||||||||||||||| | |||| |||||||    
T  2959272 agatgaagtggtattccacggaaattaaactcacacacaactgtgaggtctcgggttcgaac 2959211  T

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Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 90
Target Start/End: Complemental strand, 21037413 - 21037338
Alignment:
Q  15 agatgaagtggtaatcca-tgaaattaaactcacacacaactgtgagatttcggattcgaacacaggtcacaacgtc 90  Q
    ||||||||||||||| || ||||| ||||||||||||||||||||||  | ||||||||||| |  |||||||||||    
T  21037413 agatgaagtggtaattcactgaaaataaactcacacacaactgtgag-gtccggattcgaacccgagtcacaacgtc 21037338  T

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Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 60
Target Start/End: Complemental strand, 33704337 - 33704293
Alignment:
Q  17 atgaagtggtaatcca-tgaaattaaactcacacacaactgtgag 60  Q
    |||||||||||||||| ||||| ||||||||||||||||||||||    
T  33704337 atgaagtggtaatccactgaaaataaactcacacacaactgtgag 33704293  T

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Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 60
Target Start/End: Complemental strand, 19145593 - 19145547
Alignment:
Q  15 agatgaagtggtaatcca-tgaaattaaactcacacacaactgtgag 60  Q
    |||||||||||||||||| |||||||||| |||||||||| ||||||    
T  19145593 agatgaagtggtaatccactgaaattaaattcacacacaattgtgag 19145547  T

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Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 75
Target Start/End: Complemental strand, 361134 - 361073
Alignment:
Q  15 agatgaagtggtaatcca-tgaaattaaactcacacacaactgtgagatttcggattcgaac 75  Q
    |||||||||| ||||||| |||||||||||||||| | ||||||||| || ||| |||||||    
T  361134 agatgaagtgttaatccactgaaattaaactcacatataactgtgaggttccgggttcgaac 361073  T

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Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 83
Target Start/End: Complemental strand, 21000815 - 21000746
Alignment:
Q  15 agatgaagtggtaatcca-tgaaattaaactcacacacaactgtgagatttcggattcgaacacaggtca 83  Q
    |||||||||||||| ||| ||||||||||| ||||||||| |||||| |  ||| ||||||| |||||||    
T  21000815 agatgaagtggtaaaccactgaaattaaacccacacacaattgtgaggtcccgggttcgaacccaggtca 21000746  T

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Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 38 - 94
Target Start/End: Original strand, 17590391 - 17590447
Alignment:
Q  38 ttaaactcacacacaactgtgagatttcggattcgaacacaggtcacaacgtctagc 94  Q
    |||||||||||||||||||||||  | ||| ||||||| |  |||||||||||||||    
T  17590391 ttaaactcacacacaactgtgaggctccgggttcgaacccgagtcacaacgtctagc 17590447  T

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Target: scaffold0119 (Bit Score: 37; Significance: 0.000000000006; HSPs: 2)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 15 - 90
Target Start/End: Original strand, 13956 - 14032
Alignment:
Q  15 agatgaagtggtaatcca-tgaaattaaactcacacacaactgtgagatttcggattcgaacacaggtcacaacgtc 90  Q
    |||||||||||||||||| ||||| |||||||||||||||||||||| |  ||| ||||||| | | ||||||||||    
T  13956 agatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccggatcacaacgtc 14032  T

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Target: scaffold0119; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 15 - 90
Target Start/End: Original strand, 19636 - 19712
Alignment:
Q  15 agatgaagtggtaatcca-tgaaattaaactcacacacaactgtgagatttcggattcgaacacaggtcacaacgtc 90  Q
    |||||||||||||||||| ||||| |||||||||||||||||||||| |  ||| ||||||| | | ||||||||||    
T  19636 agatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccggatcacaacgtc 19712  T

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Target: scaffold1348 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold1348
Description:

Target: scaffold1348; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 60
Target Start/End: Original strand, 867 - 913
Alignment:
Q  15 agatgaagtggtaatcca-tgaaattaaactcacacacaactgtgag 60  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||||    
T  867 agatgaagtggtaatccactgaaaataaactcacacacaactgtgag 913  T

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Target: scaffold0053 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 60
Target Start/End: Complemental strand, 22286 - 22240
Alignment:
Q  15 agatgaagtggtaatcca-tgaaattaaactcacacacaactgtgag 60  Q
    |||||||||||||||||| ||||||||||||||||| ||||||||||    
T  22286 agatgaagtggtaatccactgaaattaaactcacacgcaactgtgag 22240  T

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Target: scaffold0352 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 60
Target Start/End: Original strand, 8948 - 8994
Alignment:
Q  15 agatgaagtggtaatcca-tgaaattaaactcacacacaactgtgag 60  Q
    ||||||||||||||  || ||||||||||||||||||||||||||||    
T  8948 agatgaagtggtaaatcactgaaattaaactcacacacaactgtgag 8994  T

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Target: scaffold0044 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 60
Target Start/End: Original strand, 9978 - 10024
Alignment:
Q  15 agatgaagtggtaatcca-tgaaattaaactcacacacaactgtgag 60  Q
    |||||||||||||||||| ||||| ||||||||||||||||| ||||    
T  9978 agatgaagtggtaatccactgaaaataaactcacacacaactatgag 10024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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