View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3175_low_18 (Length: 344)

Name: NF3175_low_18
Description: NF3175
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3175_low_18
NF3175_low_18
[»] chr5 (33 HSPs)
chr5 (11-102)||(9406376-9406467)
chr5 (259-344)||(9406624-9406709)
chr5 (38-95)||(40564924-40564981)
chr5 (29-95)||(20145986-20146052)
chr5 (11-90)||(7151074-7151153)
chr5 (31-90)||(11734609-11734668)
chr5 (25-87)||(25770883-25770945)
chr5 (38-95)||(17325429-17325486)
chr5 (31-90)||(12524436-12524495)
chr5 (31-90)||(29098078-29098137)
chr5 (31-90)||(35402322-35402381)
chr5 (36-87)||(39416033-39416084)
chr5 (29-87)||(42512765-42512823)
chr5 (33-90)||(25962204-25962261)
chr5 (34-87)||(39532116-39532169)
chr5 (33-94)||(40775046-40775107)
chr5 (30-95)||(42505170-42505235)
chr5 (38-98)||(28618892-28618952)
chr5 (42-98)||(39531168-39531224)
chr5 (31-98)||(8811916-8811983)
chr5 (31-98)||(12439445-12439512)
chr5 (13-95)||(32347482-32347564)
chr5 (42-95)||(17732145-17732198)
chr5 (13-98)||(18472490-18472575)
chr5 (13-98)||(23428523-23428608)
chr5 (34-95)||(26240452-26240513)
chr5 (38-90)||(8957496-8957548)
chr5 (42-98)||(17095997-17096053)
chr5 (31-95)||(20270997-20271061)
chr5 (42-98)||(28040938-28040994)
chr5 (38-98)||(35455381-35455441)
chr5 (31-95)||(39591331-39591395)
chr5 (31-95)||(41554770-41554834)
[»] chr2 (38 HSPs)
chr2 (13-95)||(11798296-11798378)
chr2 (16-95)||(15920142-15920221)
chr2 (34-98)||(15028091-15028153)
chr2 (38-90)||(3397751-3397803)
chr2 (31-98)||(16720612-16720679)
chr2 (29-87)||(8064562-8064620)
chr2 (33-95)||(11931157-11931219)
chr2 (29-95)||(20570254-20570320)
chr2 (38-95)||(2251114-2251171)
chr2 (38-95)||(5071137-5071194)
chr2 (13-58)||(17767371-17767416)
chr2 (29-98)||(25068137-25068206)
chr2 (14-95)||(25622811-25622892)
chr2 (34-95)||(27665836-27665897)
chr2 (38-95)||(35353930-35353987)
chr2 (31-95)||(7072733-7072797)
chr2 (34-90)||(17118586-17118642)
chr2 (11-90)||(33852162-33852241)
chr2 (32-95)||(34480249-34480312)
chr2 (31-97)||(17054820-17054886)
chr2 (13-58)||(4732341-4732386)
chr2 (33-90)||(12540582-12540639)
chr2 (30-95)||(12993987-12994052)
chr2 (34-95)||(17792759-17792820)
chr2 (38-95)||(31125146-31125203)
chr2 (14-95)||(31262720-31262801)
chr2 (33-98)||(31271661-31271726)
chr2 (42-95)||(34416522-34416575)
chr2 (42-95)||(36868317-36868370)
chr2 (13-98)||(37883918-37884003)
chr2 (33-90)||(44181080-44181137)
chr2 (14-94)||(6431177-6431257)
chr2 (34-90)||(17056241-17056297)
chr2 (34-90)||(17068688-17068744)
chr2 (34-90)||(17095258-17095314)
chr2 (34-90)||(19904794-19904850)
chr2 (42-98)||(35333814-35333870)
chr2 (38-98)||(44167475-44167535)
[»] chr1 (34 HSPs)
chr1 (11-95)||(40862593-40862677)
chr1 (13-95)||(33177365-33177447)
chr1 (13-90)||(32878973-32879050)
chr1 (11-95)||(12871884-12871968)
chr1 (31-90)||(26771389-26771448)
chr1 (31-98)||(28399100-28399167)
chr1 (16-95)||(47551363-47551442)
chr1 (31-93)||(171303-171365)
chr1 (14-77)||(6158820-6158885)
chr1 (12-58)||(13999225-13999271)
chr1 (38-95)||(34566971-34567028)
chr1 (35-95)||(8893579-8893639)
chr1 (14-97)||(45425247-45425330)
chr1 (44-98)||(20413094-20413148)
chr1 (40-90)||(37662648-37662698)
chr1 (38-95)||(2350912-2350969)
chr1 (38-95)||(13691530-13691587)
chr1 (34-95)||(29067333-29067394)
chr1 (33-97)||(8937897-8937961)
chr1 (31-90)||(33001800-33001859)
chr1 (37-90)||(10188656-10188709)
chr1 (25-91)||(23791271-23791337)
chr1 (42-95)||(424051-424104)
chr1 (13-90)||(4870806-4870883)
chr1 (35-96)||(10877634-10877695)
chr1 (30-95)||(34659408-34659473)
chr1 (34-95)||(38783353-38783414)
chr1 (42-95)||(44517457-44517510)
chr1 (42-90)||(3233080-3233128)
chr1 (31-95)||(9298190-9298254)
chr1 (42-98)||(13488292-13488348)
chr1 (11-87)||(22031877-22031953)
chr1 (42-98)||(45193384-45193440)
chr1 (31-95)||(47392419-47392483)
[»] chr6 (20 HSPs)
chr6 (13-98)||(12654074-12654159)
chr6 (31-97)||(3338089-3338155)
chr6 (38-90)||(34020893-34020945)
chr6 (31-95)||(8644511-8644575)
chr6 (31-98)||(4660726-4660793)
chr6 (31-98)||(12481135-12481202)
chr6 (28-95)||(15127897-15127964)
chr6 (31-98)||(30813355-30813422)
chr6 (29-95)||(33541298-33541364)
chr6 (42-98)||(1106623-1106679)
chr6 (31-95)||(5416991-5417055)
chr6 (35-95)||(8978515-8978575)
chr6 (31-87)||(20496476-20496532)
chr6 (31-90)||(14782919-14782978)
chr6 (32-95)||(20028474-20028537)
chr6 (29-95)||(7049526-7049592)
chr6 (38-95)||(20845298-20845355)
chr6 (42-95)||(31705474-31705527)
chr6 (31-88)||(32804578-32804635)
chr6 (42-98)||(21507610-21507666)
[»] chr4 (43 HSPs)
chr4 (16-95)||(6082198-6082277)
chr4 (38-95)||(33020694-33020751)
chr4 (16-95)||(31932530-31932609)
chr4 (38-95)||(23926331-23926388)
chr4 (13-98)||(29589125-29589210)
chr4 (11-95)||(5814609-5814693)
chr4 (11-95)||(7060592-7060676)
chr4 (31-95)||(46775625-46775689)
chr4 (31-98)||(38434881-38434948)
chr4 (13-95)||(477780-477862)
chr4 (13-95)||(22757365-22757447)
chr4 (31-97)||(38943914-38943980)
chr4 (31-89)||(47923544-47923602)
chr4 (38-95)||(3673778-3673835)
chr4 (13-58)||(40198356-40198401)
chr4 (38-95)||(50981481-50981538)
chr4 (42-98)||(8712816-8712872)
chr4 (31-95)||(15182757-15182821)
chr4 (38-98)||(35658295-35658355)
chr4 (12-68)||(41837595-41837651)
chr4 (31-95)||(43157060-43157124)
chr4 (39-95)||(47466208-47466264)
chr4 (31-95)||(51152413-51152477)
chr4 (31-98)||(26742228-26742295)
chr4 (35-65)||(10680803-10680833)
chr4 (35-65)||(10716091-10716121)
chr4 (35-65)||(10894443-10894473)
chr4 (35-65)||(10929861-10929891)
chr4 (35-65)||(17220072-17220102)
chr4 (32-90)||(26623977-26624035)
chr4 (42-95)||(11210072-11210125)
chr4 (38-95)||(11817346-11817403)
chr4 (33-98)||(55600302-55600367)
chr4 (38-98)||(4634573-4634633)
chr4 (31-95)||(7242553-7242617)
chr4 (30-90)||(9255075-9255135)
chr4 (31-95)||(14346714-14346778)
chr4 (37-65)||(22066853-22066881)
chr4 (39-95)||(31311761-31311817)
chr4 (34-90)||(31994314-31994370)
chr4 (31-95)||(36124116-36124180)
chr4 (42-98)||(39523719-39523775)
chr4 (31-99)||(40861221-40861289)
[»] scaffold1294 (1 HSPs)
scaffold1294 (32-94)||(1059-1121)
[»] chr7 (36 HSPs)
chr7 (13-95)||(37375814-37375896)
chr7 (31-95)||(46025814-46025878)
chr7 (31-90)||(32312850-32312909)
chr7 (11-90)||(46918662-46918741)
chr7 (13-95)||(36719320-36719402)
chr7 (38-95)||(29804446-29804503)
chr7 (31-95)||(3266675-3266739)
chr7 (35-95)||(6646368-6646428)
chr7 (39-90)||(4621144-4621195)
chr7 (31-98)||(9137239-9137306)
chr7 (13-95)||(45482335-45482417)
chr7 (38-95)||(14733832-14733889)
chr7 (31-64)||(15336059-15336092)
chr7 (30-67)||(29352508-29352545)
chr7 (11-98)||(5238215-5238299)
chr7 (31-95)||(5684653-5684717)
chr7 (31-95)||(5709703-5709767)
chr7 (38-98)||(21552219-21552279)
chr7 (42-98)||(22747265-22747321)
chr7 (38-102)||(31724910-31724974)
chr7 (31-95)||(38273187-38273251)
chr7 (33-95)||(25531738-25531800)
chr7 (42-95)||(6667704-6667757)
chr7 (38-95)||(21329065-21329122)
chr7 (38-95)||(32741048-32741105)
chr7 (38-95)||(37399888-37399945)
chr7 (38-95)||(42603538-42603595)
chr7 (34-95)||(43256325-43256385)
chr7 (38-67)||(45949474-45949503)
chr7 (11-95)||(17473520-17473604)
chr7 (11-95)||(17579610-17579694)
chr7 (35-95)||(22751689-22751749)
chr7 (31-95)||(36350450-36350514)
chr7 (38-98)||(43483878-43483938)
chr7 (38-90)||(47295497-47295549)
chr7 (38-98)||(49167215-49167275)
[»] chr3 (39 HSPs)
chr3 (31-97)||(32080528-32080594)
chr3 (31-98)||(40797316-40797383)
chr3 (13-98)||(55455142-55455227)
chr3 (31-95)||(30156057-30156121)
chr3 (39-98)||(105811-105870)
chr3 (12-87)||(3961557-3961632)
chr3 (31-98)||(33637692-33637759)
chr3 (11-90)||(47587145-47587224)
chr3 (31-98)||(49627868-49627935)
chr3 (17-95)||(4019867-4019945)
chr3 (36-98)||(40883639-40883701)
chr3 (29-87)||(41598251-41598309)
chr3 (16-56)||(44984671-44984711)
chr3 (31-98)||(913080-913147)
chr3 (32-95)||(3312726-3312789)
chr3 (31-90)||(29776462-29776521)
chr3 (31-90)||(34767269-34767328)
chr3 (29-84)||(37051875-37051930)
chr3 (31-98)||(40702718-40702785)
chr3 (31-90)||(41868104-41868163)
chr3 (29-87)||(2148036-2148094)
chr3 (33-91)||(31628721-31628779)
chr3 (29-67)||(53427079-53427117)
chr3 (13-95)||(54240351-54240433)
chr3 (42-95)||(14585771-14585824)
chr3 (42-95)||(36691566-36691619)
chr3 (30-67)||(50460472-50460509)
chr3 (38-95)||(50520073-50520130)
chr3 (42-95)||(53155197-53155250)
chr3 (30-95)||(53962400-53962465)
chr3 (42-95)||(54706499-54706552)
chr3 (14-90)||(2598344-2598420)
chr3 (47-95)||(3457236-3457284)
chr3 (30-90)||(21084510-21084570)
chr3 (13-65)||(25084289-25084341)
chr3 (31-95)||(31550211-31550275)
chr3 (42-98)||(35175017-35175073)
chr3 (38-98)||(48401141-48401201)
chr3 (38-98)||(48401397-48401457)
[»] chr8 (25 HSPs)
chr8 (16-97)||(6219876-6219957)
chr8 (13-98)||(10148216-10148301)
chr8 (11-95)||(3028279-3028363)
chr8 (31-90)||(5989896-5989955)
chr8 (38-90)||(27534184-27534236)
chr8 (31-87)||(37720123-37720179)
chr8 (31-98)||(16809146-16809213)
chr8 (13-87)||(32778747-32778821)
chr8 (14-95)||(5917516-5917597)
chr8 (38-87)||(18190626-18190675)
chr8 (38-95)||(32062084-32062141)
chr8 (38-95)||(32920934-32920991)
chr8 (31-95)||(12243983-12244047)
chr8 (31-95)||(12357078-12357142)
chr8 (11-95)||(31147594-31147678)
chr8 (31-98)||(16937103-16937170)
chr8 (42-95)||(5526111-5526164)
chr8 (38-95)||(10338598-10338655)
chr8 (38-95)||(14530683-14530740)
chr8 (33-90)||(20993092-20993149)
chr8 (42-95)||(24790935-24790988)
chr8 (42-95)||(39067457-39067510)
chr8 (30-90)||(18196918-18196978)
chr8 (42-90)||(37128260-37128308)
chr8 (42-98)||(37612945-37613001)
[»] scaffold0112 (1 HSPs)
scaffold0112 (38-95)||(25279-25336)
[»] scaffold0542 (1 HSPs)
scaffold0542 (29-85)||(4063-4119)
[»] scaffold0999 (1 HSPs)
scaffold0999 (31-98)||(1987-2054)
[»] scaffold0002 (1 HSPs)
scaffold0002 (17-68)||(404541-404592)
[»] scaffold0312 (1 HSPs)
scaffold0312 (42-95)||(6445-6498)
[»] scaffold0009 (1 HSPs)
scaffold0009 (38-87)||(105330-105379)


Alignment Details
Target: chr5 (Bit Score: 92; Significance: 1e-44; HSPs: 33)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 11 - 102
Target Start/End: Original strand, 9406376 - 9406467
Alignment:
Q  11 cagagacatgagttttatgaagacttgaatatagtcatatttgtaggcttatgtactccgtctttttatgctattaacatagatgatgcaag 102  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9406376 cagagacatgagttttatgaagacttgaatatagtcatatttgtaggcttatgtactccgtctttttatgctattaacatagatgatgcaag 9406467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 259 - 344
Target Start/End: Original strand, 9406624 - 9406709
Alignment:
Q  259 atatgccagggccactgtattccatttgatatgcatgcagatgcagctgattgcaaattttggtagcgtctactcccattttcgtc 344  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  9406624 atatgccagggccgctgtattccatttgatatgcatgcagatgcagctaattgcaaattttggtagcgtctactcccattttcgtc 9406709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 38 - 95
Target Start/End: Complemental strand, 40564981 - 40564924
Alignment:
Q  38 aatatagtcatatttgtaggcttatgtactccgtctttttatgctattaacatagatg 95  Q
    ||||||||||||||||||||||||||||||  ||| ||||||||||||||||||||||    
T  40564981 aatatagtcatatttgtaggcttatgtactttgtcgttttatgctattaacatagatg 40564924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 29 - 95
Target Start/End: Complemental strand, 20146052 - 20145986
Alignment:
Q  29 gaagacttgaatatagtcatatttgtaggcttatgtactccgtctttttatgctattaacatagatg 95  Q
    ||||| || ||||||||||||||||||||||||||||||  ||| ||||||||||||||||| ||||    
T  20146052 gaagattttaatatagtcatatttgtaggcttatgtactttgtcattttatgctattaacattgatg 20145986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 11 - 90
Target Start/End: Original strand, 7151074 - 7151153
Alignment:
Q  11 cagagacatgagttttatgaagacttgaatatagtcatatttgtaggcttatgtactccgtctttttatgctattaacat 90  Q
    ||||||||| ||| ||  |||||||||||||||||||| |||||||| |||||||||  ||| ||||||| |||||||||    
T  7151074 cagagacattagtattccgaagacttgaatatagtcatgtttgtaggtttatgtactttgtcgttttatgttattaacat 7151153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 31 - 90
Target Start/End: Complemental strand, 11734668 - 11734609
Alignment:
Q  31 agacttgaatatagtcatatttgtaggcttatgtactccgtctttttatgctattaacat 90  Q
    |||||||||||||||||||||||||||| ||||||||  | | |||||||||||||||||    
T  11734668 agacttgaatatagtcatatttgtaggcatatgtactttgccgttttatgctattaacat 11734609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 25 - 87
Target Start/End: Original strand, 25770883 - 25770945
Alignment:
Q  25 ttatgaagacttgaatatagtcatatttgtaggcttatgtactccgtctttttatgctattaa 87  Q
    ||||||||||||||||| | |||||||||||||||||||||||  ||| |||||| |||||||    
T  25770883 ttatgaagacttgaatacaatcatatttgtaggcttatgtactttgtcattttattctattaa 25770945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 38 - 95
Target Start/End: Complemental strand, 17325486 - 17325429
Alignment:
Q  38 aatatagtcatatttgtaggcttatgtactccgtctttttatgctattaacatagatg 95  Q
    ||||||||||||| ||||||||||||||||  ||| ||||||||||||||||| ||||    
T  17325486 aatatagtcatatatgtaggcttatgtactttgtcattttatgctattaacatggatg 17325429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 31 - 90
Target Start/End: Complemental strand, 12524495 - 12524436
Alignment:
Q  31 agacttgaatatagtcatatttgtaggcttatgtactccgtctttttatgctattaacat 90  Q
    |||||| |||||| |||||||||||||||| ||||||  ||| |||||||||||||||||    
T  12524495 agactttaatataatcatatttgtaggcttttgtactttgtcattttatgctattaacat 12524436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 31 - 90
Target Start/End: Original strand, 29098078 - 29098137
Alignment:
Q  31 agacttgaatatagtcatatttgtaggcttatgtactccgtctttttatgctattaacat 90  Q
    |||||||||||||||||||||||||||| |||||||   | | |||||||||||||||||    
T  29098078 agacttgaatatagtcatatttgtaggcatatgtaccttgccgttttatgctattaacat 29098137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 31 - 90
Target Start/End: Original strand, 35402322 - 35402381
Alignment:
Q  31 agacttgaatatagtcatatttgtaggcttatgtactccgtctttttatgctattaacat 90  Q
    |||||||||||||||||||||||||||| ||| |||||  |  |||||||||||||||||    
T  35402322 agacttgaatatagtcatatttgtaggcatatctactcaattgttttatgctattaacat 35402381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 36 - 87
Target Start/End: Complemental strand, 39416084 - 39416033
Alignment:
Q  36 tgaatatagtcatatttgtaggcttatgtactccgtctttttatgctattaa 87  Q
    ||||||||||||||||||||||| ||||||||| ||| |||| |||||||||    
T  39416084 tgaatatagtcatatttgtaggcatatgtactctgtcattttttgctattaa 39416033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 29 - 87
Target Start/End: Complemental strand, 42512823 - 42512765
Alignment:
Q  29 gaagacttgaatatagtcatatttgtaggcttatgtactccgtctttttatgctattaa 87  Q
    |||||||| ||||||||||||||||||||| ||  ||||| ||| ||||||||||||||    
T  42512823 gaagactttaatatagtcatatttgtaggcatagatactctgtcgttttatgctattaa 42512765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 33 - 90
Target Start/End: Original strand, 25962204 - 25962261
Alignment:
Q  33 acttgaatatagtcatatttgtaggcttatgtactccgtctttttatgctattaacat 90  Q
    |||||||||||||||||||||||||| ||  ||||  ||| |||||||||||||||||    
T  25962204 acttgaatatagtcatatttgtaggcatagatactttgtcgttttatgctattaacat 25962261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 34 - 87
Target Start/End: Complemental strand, 39532169 - 39532116
Alignment:
Q  34 cttgaatatagtcatatttgtaggcttatgtactccgtctttttatgctattaa 87  Q
    ||||||||||||||||||||||||| |||||||||   | ||||||||||||||    
T  39532169 cttgaatatagtcatatttgtaggcatatgtactcgaccgttttatgctattaa 39532116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 33 - 94
Target Start/End: Original strand, 40775046 - 40775107
Alignment:
Q  33 acttgaatatagtcatatttgtaggcttatgtactccgtctttttatgctattaacatagat 94  Q
    |||| ||||||||||||| |||||||||  |||||  ||| |||||||||||||||||||||    
T  40775046 acttaaatatagtcatatgtgtaggctttagtactttgtcgttttatgctattaacatagat 40775107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 30 - 95
Target Start/End: Complemental strand, 42505235 - 42505170
Alignment:
Q  30 aagacttgaatatagtcatatttgtaggcttatgtactccgtctttttatgctattaacatagatg 95  Q
    ||||||| ||||||||||||||||||||| ||  ||||| ||| ||| ||||||||||||| ||||    
T  42505235 aagactttaatatagtcatatttgtaggcatagatactctgtcgtttcatgctattaacatggatg 42505170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 38 - 98
Target Start/End: Original strand, 28618892 - 28618952
Alignment:
Q  38 aatatagtcatatttgtaggcttatgtactccgtctttttatgctattaacatagatgatg 98  Q
    ||||||||||||| ||||||| | ||||||  ||| ||||||||||||||||| |||||||    
T  28618892 aatatagtcatatgtgtaggcatttgtactttgtcgttttatgctattaacatggatgatg 28618952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 42 - 98
Target Start/End: Complemental strand, 39531224 - 39531168
Alignment:
Q  42 tagtcatatttgtaggcttatgtactccgtctttttatgctattaacatagatgatg 98  Q
    ||||||||||||||||| ||||||||  | | ||||||||||||||||| |||||||    
T  39531224 tagtcatatttgtaggcatatgtactttgccgttttatgctattaacatggatgatg 39531168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 31 - 98
Target Start/End: Complemental strand, 8811983 - 8811916
Alignment:
Q  31 agacttgaatatagtcatatttgtaggcttatgtactccgtctttttatgctattaacatagatgatg 98  Q
    |||||| ||||||||||||| |||||||||  |||||  | | ||||||||||||||||| |||||||    
T  8811983 agacttaaatatagtcatatgtgtaggctttagtactttgccgttttatgctattaacatggatgatg 8811916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 31 - 98
Target Start/End: Complemental strand, 12439512 - 12439445
Alignment:
Q  31 agacttgaatatagtcatatttgtaggcttatgtactccgtctttttatgctattaacatagatgatg 98  Q
    |||| ||| |||| |||||||||||||| || |||||  ||| ||||||||||||||||| |||||||    
T  12439512 agacatgagtataatcatatttgtaggcataggtactttgtcgttttatgctattaacatggatgatg 12439445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 95
Target Start/End: Complemental strand, 32347564 - 32347482
Alignment:
Q  13 gagacatgagttttatgaagacttgaatatagtcatatttgtaggcttatgtactccgtctttttatgctattaacatagatg 95  Q
    ||||||||||| ||  ||| || ||||||||||||||||||||||| ||  ||||  | | ||||||||||||||||| ||||    
T  32347564 gagacatgagtattccgaaaacatgaatatagtcatatttgtaggcataactactttgccgttttatgctattaacatggatg 32347482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 42 - 95
Target Start/End: Complemental strand, 17732198 - 17732145
Alignment:
Q  42 tagtcatatttgtaggcttatgtactccgtctttttatgctattaacatagatg 95  Q
    ||||||||||||||||| ||||||||  | | ||||||||||||||||| ||||    
T  17732198 tagtcatatttgtaggcatatgtactttgccgttttatgctattaacatggatg 17732145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 98
Target Start/End: Complemental strand, 18472575 - 18472490
Alignment:
Q  13 gagacatgagttttatgaagacttgaatatagtcatatttgtaggcttatgtactccgtctttttatgctattaacatagatgatg 98  Q
    ||||||||||| ||  | ||||||  |||||||||||| |||||||||  |||||  ||  ||||||||||||||||| |||||||    
T  18472575 gagacatgagtattccggagacttacatatagtcatatgtgtaggctttagtactttgttgttttatgctattaacatggatgatg 18472490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 98
Target Start/End: Original strand, 23428523 - 23428608
Alignment:
Q  13 gagacatgagttttatgaagacttgaatatagtcatatttgtaggcttatgtactccgtctttttatgctattaacatagatgatg 98  Q
    ||||||||||| ||  | |||| | ||||||||||||||||||||| || |||||    | ||||||||||||||||| |||||||    
T  23428523 gagacatgagtatttcggagacataaatatagtcatatttgtaggcataggtacttttccgttttatgctattaacatggatgatg 23428608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 95
Target Start/End: Complemental strand, 26240513 - 26240452
Alignment:
Q  34 cttgaatatagtcatatttgtaggcttatgtactccgtctttttatgctattaacatagatg 95  Q
    ||||||||||||||||||| ||| |  ||| || | ||| ||||||||||||||||||||||    
T  26240513 cttgaatatagtcatatttatagacacatgcacactgtcgttttatgctattaacatagatg 26240452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 38 - 90
Target Start/End: Original strand, 8957496 - 8957548
Alignment:
Q  38 aatatagtcatatttgtaggcttatgtactccgtctttttatgctattaacat 90  Q
    ||||||||||||||||| ||||| ||||||  ||| ||||||| |||||||||    
T  8957496 aatatagtcatatttgttggcttgtgtactttgtcgttttatgttattaacat 8957548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 42 - 98
Target Start/End: Complemental strand, 17096053 - 17095997
Alignment:
Q  42 tagtcatatttgtaggcttatgtactccgtctttttatgctattaacatagatgatg 98  Q
    ||||||||||||||||| || |||||  | | ||||||||||||||||| |||||||    
T  17096053 tagtcatatttgtaggcataagtactttgccgttttatgctattaacatggatgatg 17095997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 31 - 95
Target Start/End: Original strand, 20270997 - 20271061
Alignment:
Q  31 agacttgaatatagtcatatttgtaggcttatgtactccgtctttttatgctattaacatagatg 95  Q
    |||||| ||||||||||||| ||||| |||  |||||  ||| ||||||||||||||||| ||||    
T  20270997 agacttaaatatagtcatatgtgtagactttagtactttgtcgttttatgctattaacatggatg 20271061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 42 - 98
Target Start/End: Original strand, 28040938 - 28040994
Alignment:
Q  42 tagtcatatttgtaggcttatgtactccgtctttttatgctattaacatagatgatg 98  Q
    ||||||||||||||||| ||||||||  | | |||||||||| |||||| |||||||    
T  28040938 tagtcatatttgtaggcatatgtactttgccgttttatgctactaacatggatgatg 28040994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 38 - 98
Target Start/End: Original strand, 35455381 - 35455441
Alignment:
Q  38 aatatagtcatatttgtaggcttatgtactccgtctttttatgctattaacatagatgatg 98  Q
    ||||||| ||||||||||||||||| ||||  ||| ||||||| ||| ||||| |||||||    
T  35455381 aatatagacatatttgtaggcttatatactttgtcattttatgttatcaacatggatgatg 35455441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 31 - 95
Target Start/End: Original strand, 39591331 - 39591395
Alignment:
Q  31 agacttgaatatagtcatatttgtaggcttatgtactccgtctttttatgctattaacatagatg 95  Q
    |||||| |||||| |||||| |||||||||||||| |  ||| ||||||| ||||||||| ||||    
T  39591331 agactttaatatattcatatatgtaggcttatgtattttgtcgttttatgttattaacatggatg 39591395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 31 - 95
Target Start/End: Original strand, 41554770 - 41554834
Alignment:
Q  31 agacttgaatatagtcatatttgtaggcttatgtactccgtctttttatgctattaacatagatg 95  Q
    |||||| ||||||||||||| |||||||||  |||||  | | ||||||||||||||||| ||||    
T  41554770 agacttaaatatagtcatatgtgtaggctttagtactttgccgttttatgctattaacatggatg 41554834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 51; Significance: 3e-20; HSPs: 38)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 13 - 95
Target Start/End: Complemental strand, 11798378 - 11798296
Alignment:
Q  13 gagacatgagttttatgaagacttgaatatagtcatatttgtaggcttatgtactccgtctttttatgctattaacatagatg 95  Q
    ||||||||||| ||||| |||||||||||||||||||||||||||| || |||||  ||| ||||||||||||||||| ||||    
T  11798378 gagacatgagtattatggagacttgaatatagtcatatttgtaggcataggtactttgtcgttttatgctattaacatggatg 11798296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 16 - 95
Target Start/End: Original strand, 15920142 - 15920221
Alignment:
Q  16 acatgagttttatgaagacttgaatatagtcatatttgtaggcttatgtactccgtctttttatgctattaacatagatg 95  Q
    |||||||| ||  |||||||||||||||||||||||||||||| ||||||||  | | ||||||||||||||||| ||||    
T  15920142 acatgagtatttcgaagacttgaatatagtcatatttgtaggcatatgtactttgccgttttatgctattaacattgatg 15920221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 34 - 98
Target Start/End: Complemental strand, 15028153 - 15028091
Alignment:
Q  34 cttgaatatagtcatatttgtaggcttatgtactccgtctttttatgctattaacatagatgatg 98  Q
    ||||||||||||||||||||||||| ||||||||  ||| |||||||||||| |||| |||||||    
T  15028153 cttgaatatagtcatatttgtaggcatatgtact--gtcattttatgctattgacatggatgatg 15028091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 38 - 90
Target Start/End: Complemental strand, 3397803 - 3397751
Alignment:
Q  38 aatatagtcatatttgtaggcttatgtactccgtctttttatgctattaacat 90  Q
    |||||||||||||||||| |||||||||||  ||| |||||||||||||||||    
T  3397803 aatatagtcatatttgtatgcttatgtactttgtcgttttatgctattaacat 3397751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 31 - 98
Target Start/End: Complemental strand, 16720679 - 16720612
Alignment:
Q  31 agacttgaatatagtcatatttgtaggcttatgtactccgtctttttatgctattaacatagatgatg 98  Q
    |||||| ||||||||||||| ||||||| | ||||||  ||| ||||||||||||||||| |||||||    
T  16720679 agacttaaatatagtcatatgtgtaggcatttgtactttgtcattttatgctattaacatggatgatg 16720612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 29 - 87
Target Start/End: Complemental strand, 8064620 - 8064562
Alignment:
Q  29 gaagacttgaatatagtcatatttgtaggcttatgtactccgtctttttatgctattaa 87  Q
    ||||||||||||||||||||||||| | | |||||||||  ||| ||||||||||||||    
T  8064620 gaagacttgaatatagtcatatttgcaagtttatgtactttgtcgttttatgctattaa 8064562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 33 - 95
Target Start/End: Original strand, 11931157 - 11931219
Alignment:
Q  33 acttgaatatagtcatatttgtaggcttatgtactccgtctttttatgctattaacatagatg 95  Q
    |||||||||||||||||| ||||||||| ||||||  | | ||||||||||||||||| ||||    
T  11931157 acttgaatatagtcatatgtgtaggcttttgtactttgccgttttatgctattaacatggatg 11931219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 29 - 95
Target Start/End: Original strand, 20570254 - 20570320
Alignment:
Q  29 gaagacttgaatatagtcatatttgtaggcttatgtactccgtctttttatgctattaacatagatg 95  Q
    ||||||||||||||||||||| ||||| || ||  ||||  ||| ||||||||||||||||||||||    
T  20570254 gaagacttgaatatagtcatagttgtaagcatagctactttgtcgttttatgctattaacatagatg 20570320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 38 - 95
Target Start/End: Complemental strand, 2251171 - 2251114
Alignment:
Q  38 aatatagtcatatttgtaggcttatgtactccgtctttttatgctattaacatagatg 95  Q
    ||||||||||||||||||||||||||||||  |   ||||||||||||||||| ||||    
T  2251171 aatatagtcatatttgtaggcttatgtactttgcagttttatgctattaacatggatg 2251114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 38 - 95
Target Start/End: Complemental strand, 5071194 - 5071137
Alignment:
Q  38 aatatagtcatatttgtaggcttatgtactccgtctttttatgctattaacatagatg 95  Q
    |||||||||||||||||||||||||||| |  | | ||||||||||||||||| ||||    
T  5071194 aatatagtcatatttgtaggcttatgtattatgccgttttatgctattaacatggatg 5071137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 58
Target Start/End: Complemental strand, 17767416 - 17767371
Alignment:
Q  13 gagacatgagttttatgaagacttgaatatagtcatatttgtaggc 58  Q
    ||||||||||| ||||  ||||||||||||||||||||||||||||    
T  17767416 gagacatgagtattattgagacttgaatatagtcatatttgtaggc 17767371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 29 - 98
Target Start/End: Original strand, 25068137 - 25068206
Alignment:
Q  29 gaagacttgaatatagtcatatttgtaggcttatgtactccgtctttttatgctattaacatagatgatg 98  Q
    |||||||||||||||||||||||||||||| || ||||   | | ||||||||||||||||  |||||||    
T  25068137 gaagacttgaatatagtcatatttgtaggcataggtaccttgccgttttatgctattaacactgatgatg 25068206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 14 - 95
Target Start/End: Complemental strand, 25622892 - 25622811
Alignment:
Q  14 agacatgagttttatgaagacttgaatatagtcatatttgtaggcttatgtactccgtctttttatgctattaacatagatg 95  Q
    |||||||||| ||  | |||||| ||||||||||||| ||||||||| ||||||  | | ||||||||||||||||| ||||    
T  25622892 agacatgagtattccggagactttaatatagtcatatgtgtaggcttttgtactttgacgttttatgctattaacatggatg 25622811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 34 - 95
Target Start/End: Original strand, 27665836 - 27665897
Alignment:
Q  34 cttgaatatagtcatatttgtaggcttatgtactccgtctttttatgctattaacatagatg 95  Q
    ||||||||||||||||||||||||| ||||||||  |   |||||| |||||||||||||||    
T  27665836 cttgaatatagtcatatttgtaggcatatgtactatgatgttttatactattaacatagatg 27665897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 38 - 95
Target Start/End: Original strand, 35353930 - 35353987
Alignment:
Q  38 aatatagtcatatttgtaggcttatgtactccgtctttttatgctattaacatagatg 95  Q
    ||||||||||||||| ||||||||||||||  ||  ||||||||||||||||| ||||    
T  35353930 aatatagtcatatttataggcttatgtactttgttgttttatgctattaacatggatg 35353987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 31 - 95
Target Start/End: Complemental strand, 7072797 - 7072733
Alignment:
Q  31 agacttgaatatagtcatatttgtaggcttatgtactccgtctttttatgctattaacatagatg 95  Q
    |||| ||||||||||||||||||||||| ||| ||||  | | ||||||||||||||||| ||||    
T  7072797 agacatgaatatagtcatatttgtaggcatatatactttgccgttttatgctattaacatggatg 7072733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 90
Target Start/End: Complemental strand, 17118642 - 17118586
Alignment:
Q  34 cttgaatatagtcatatttgtaggcttatgtactccgtctttttatgctattaacat 90  Q
    ||||||||||||||||| ||||||| | ||||||  ||| |||||||||||||||||    
T  17118642 cttgaatatagtcatatgtgtaggcgtttgtactttgtcgttttatgctattaacat 17118586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 11 - 90
Target Start/End: Original strand, 33852162 - 33852241
Alignment:
Q  11 cagagacatgagttttatgaagacttgaatatagtcatatttgtaggcttatgtactccgtctttttatgctattaacat 90  Q
    |||||||||||||  | || ||||||||||||| || |||||||||  |||||||||   || |||||||||||||||||    
T  33852162 cagagacatgagtactttggagacttgaatatattcgtatttgtagatttatgtactttatcgttttatgctattaacat 33852241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 32 - 95
Target Start/End: Original strand, 34480249 - 34480312
Alignment:
Q  32 gacttgaatatagtcatatttgtaggcttatgtactccgtctttttatgctattaacatagatg 95  Q
    ||||||||||||||||||| |||||| || ||||||  ||| |||||| |||||||||| ||||    
T  34480249 gacttgaatatagtcatatgtgtaggtttttgtactttgtcgttttattctattaacatggatg 34480312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 31 - 97
Target Start/End: Complemental strand, 17054886 - 17054820
Alignment:
Q  31 agacttgaatatagtcatatttgtaggcttatgtactccgtctttttatgctattaacatagatgat 97  Q
    |||||||| ||||||||||||||||| ||||| |||||   | ||||||||| ||||||| ||||||    
T  17054886 agacttgactatagtcatatttgtagacttatatactctacccttttatgcttttaacatggatgat 17054820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 58
Target Start/End: Original strand, 4732341 - 4732386
Alignment:
Q  13 gagacatgagttttatgaagacttgaatatagtcatatttgtaggc 58  Q
    ||||||||||| ||  | ||||||||||||||||||||||||||||    
T  4732341 gagacatgagtattccggagacttgaatatagtcatatttgtaggc 4732386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 90
Target Start/End: Complemental strand, 12540639 - 12540582
Alignment:
Q  33 acttgaatatagtcatatttgtaggcttatgtactccgtctttttatgctattaacat 90  Q
    |||||||||||||||||||||| || ||||| | |   ||||||||||||||||||||    
T  12540639 acttgaatatagtcatatttgttggtttatgcattttttctttttatgctattaacat 12540582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 95
Target Start/End: Complemental strand, 12994052 - 12993987
Alignment:
Q  30 aagacttgaatatagtcatatttgtaggcttatgtactccgtctttttatgctattaacatagatg 95  Q
    |||||||||||||| |||||||||||| | ||  ||||||||| ||||||||| ||| ||| ||||    
T  12994052 aagacttgaatataatcatatttgtagacatagatactccgtcgttttatgcttttagcattgatg 12993987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 95
Target Start/End: Original strand, 17792759 - 17792820
Alignment:
Q  34 cttgaatatagtcatatttgtaggcttatgtactccgtctttttatgctattaacatagatg 95  Q
    |||| |||||||||||||||||||| ||| |||||     ||||||||||||||||||||||    
T  17792759 cttgtatatagtcatatttgtaggcatatatactctactattttatgctattaacatagatg 17792820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 38 - 95
Target Start/End: Complemental strand, 31125203 - 31125146
Alignment:
Q  38 aatatagtcatatttgtaggcttatgtactccgtctttttatgctattaacatagatg 95  Q
    |||||||| |||||||||||||||||||||  | | ||||||| ||||||||| ||||    
T  31125203 aatatagttatatttgtaggcttatgtactttgccgttttatgatattaacatggatg 31125146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 95
Target Start/End: Complemental strand, 31262801 - 31262720
Alignment:
Q  14 agacatgagttttatgaagacttgaatatagtcatatttgtaggcttatgtactccgtctttttatgctattaacatagatg 95  Q
    |||||||||| || || |||||||||||||||||| ||||||| ||  ||||||  ||| ||| ||| ||||||||| ||||    
T  31262801 agacatgagtattctggagacttgaatatagtcatgtttgtagactattgtactttgtcgtttaatgttattaacatggatg 31262720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 98
Target Start/End: Original strand, 31271661 - 31271726
Alignment:
Q  33 acttgaatatagtcatatttgtaggcttatgtactccgtctttttatgctattaacatagatgatg 98  Q
    ||||||| |||||||||||||||||| ||| || |  | | ||||||||||||||||| |||||||    
T  31271661 acttgaagatagtcatatttgtaggcatatatattatgccattttatgctattaacatggatgatg 31271726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 42 - 95
Target Start/End: Complemental strand, 34416575 - 34416522
Alignment:
Q  42 tagtcatatttgtaggcttatgtactccgtctttttatgctattaacatagatg 95  Q
    ||||||||||||||||| ||||||||  | | ||||||||||||||||| ||||    
T  34416575 tagtcatatttgtaggcatatgtactttgccgttttatgctattaacatggatg 34416522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 42 - 95
Target Start/End: Original strand, 36868317 - 36868370
Alignment:
Q  42 tagtcatatttgtaggcttatgtactccgtctttttatgctattaacatagatg 95  Q
    ||||||||||||||||| ||||||||  | | ||||||||||||||||| ||||    
T  36868317 tagtcatatttgtaggcatatgtactttgccgttttatgctattaacatggatg 36868370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 98
Target Start/End: Original strand, 37883918 - 37884003
Alignment:
Q  13 gagacatgagttttatgaagacttgaatatagtcatatttgtaggcttatgtactccgtctttttatgctattaacatagatgatg 98  Q
    ||||||||||| || |  | |||| ||||||||||||| |||||||||  |||||  | | ||||||||||||||||| |||||||    
T  37883918 gagacatgagtattctagatacttaaatatagtcatatgtgtaggctttagtactttgccgttttatgctattaacatggatgatg 37884003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 90
Target Start/End: Complemental strand, 44181137 - 44181080
Alignment:
Q  33 acttgaatatagtcatatttgtaggcttatgtactccgtctttttatgctattaacat 90  Q
    |||||||||||||||||||| || | | ||||| | |||| |||||||||||||||||    
T  44181137 acttgaatatagtcatatttataagttcatgtatttcgtcattttatgctattaacat 44181080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 94
Target Start/End: Complemental strand, 6431257 - 6431177
Alignment:
Q  14 agacatgagttttatgaagacttgaatatagtcatatttgtaggcttatgtactccgtctttttatgctattaacatagat 94  Q
    |||||||||| ||  | |||||| |||||||||||||||||| || ||||||||  | | |||||||| ||||| ||||||    
T  6431257 agacatgagtattccggagacttaaatatagtcatatttgtatgcatatgtactttgccgttttatgcgattaatatagat 6431177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 34 - 90
Target Start/End: Complemental strand, 17056297 - 17056241
Alignment:
Q  34 cttgaatatagtcatatttgtaggcttatgtactccgtctttttatgctattaacat 90  Q
    ||||||||||||||||| ||||| ||| ||||||  | | |||||||||||||||||    
T  17056297 cttgaatatagtcatatgtgtagacttttgtactttgccgttttatgctattaacat 17056241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 34 - 90
Target Start/End: Complemental strand, 17068744 - 17068688
Alignment:
Q  34 cttgaatatagtcatatttgtaggcttatgtactccgtctttttatgctattaacat 90  Q
    ||||||||||||||||| ||||| ||| ||||||  | | |||||||||||||||||    
T  17068744 cttgaatatagtcatatgtgtagacttttgtactttgccgttttatgctattaacat 17068688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 34 - 90
Target Start/End: Complemental strand, 17095314 - 17095258
Alignment:
Q  34 cttgaatatagtcatatttgtaggcttatgtactccgtctttttatgctattaacat 90  Q
    ||||||||||||||||| ||||| ||| ||||||  | | |||||||||||||||||    
T  17095314 cttgaatatagtcatatgtgtagacttttgtactttgccgttttatgctattaacat 17095258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 34 - 90
Target Start/End: Original strand, 19904794 - 19904850
Alignment:
Q  34 cttgaatatagtcatatttgtaggcttatgtactccgtctttttatgctattaacat 90  Q
    ||||||||||||||| ||||||| |  |||||||| | | |||||||||||||||||    
T  19904794 cttgaatatagtcatgtttgtagacacatgtactctgccgttttatgctattaacat 19904850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 42 - 98
Target Start/End: Original strand, 35333814 - 35333870
Alignment:
Q  42 tagtcatatttgtaggcttatgtactccgtctttttatgctattaacatagatgatg 98  Q
    ||||||||||||||||| || |||||  | | ||||||||||||||||| |||||||    
T  35333814 tagtcatatttgtaggcataggtactttgccgttttatgctattaacatggatgatg 35333870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 38 - 98
Target Start/End: Complemental strand, 44167535 - 44167475
Alignment:
Q  38 aatatagtcatatttgtaggcttatgtactccgtctttttatgctattaacatagatgatg 98  Q
    ||||||||||||| ||||||| | ||||||  | | ||||||||||||||||| |||||||    
T  44167535 aatatagtcatatgtgtaggcatttgtactttgccgttttatgctattaacatggatgatg 44167475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 49; Significance: 5e-19; HSPs: 34)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 11 - 95
Target Start/End: Complemental strand, 40862677 - 40862593
Alignment:
Q  11 cagagacatgagttttatgaagacttgaatatagtcatatttgtaggcttatgtactccgtctttttatgctattaacatagatg 95  Q
    ||||||||||||| || ||||||||  ||||||||||||||||||||| || |||||| ||| ||||||||||||||||| ||||    
T  40862677 cagagacatgagtattctgaagactaaaatatagtcatatttgtaggcataagtactctgtcgttttatgctattaacatggatg 40862593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 13 - 95
Target Start/End: Complemental strand, 33177447 - 33177365
Alignment:
Q  13 gagacatgagttttatgaagacttgaatatagtcatatttgtaggcttatgtactccgtctttttatgctattaacatagatg 95  Q
    ||||||||||| ||||| |||||||||||||||||||| ||||||||| ||||||  | | |||||||| |||||||| ||||    
T  33177447 gagacatgagtattatggagacttgaatatagtcatatgtgtaggcttttgtactttgccgttttatgcaattaacatggatg 33177365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 13 - 90
Target Start/End: Original strand, 32878973 - 32879050
Alignment:
Q  13 gagacatgagttttatgaagacttgaatatagtcatatttgtaggcttatgtactccgtctttttatgctattaacat 90  Q
    ||||||||||| ||  ||| |||||||||||||||||||||||||| || |||||  ||| |||||||||||||||||    
T  32878973 gagacatgagtattccgaaaacttgaatatagtcatatttgtaggcataagtactttgtcgttttatgctattaacat 32879050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 11 - 95
Target Start/End: Original strand, 12871884 - 12871968
Alignment:
Q  11 cagagacatgagttttatgaagacttgaatatagtcatatttgtaggcttatgtactccgtctttttatgctattaacatagatg 95  Q
    ||||||||||||| ||  | ||||||||||||||||||| |||||||| ||||||||  ||| |||||||||| |||||| ||||    
T  12871884 cagagacatgagtattccggagacttgaatatagtcatacttgtaggcatatgtactttgtcgttttatgctaataacatggatg 12871968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 31 - 90
Target Start/End: Original strand, 26771389 - 26771448
Alignment:
Q  31 agacttgaatatagtcatatttgtaggcttatgtactccgtctttttatgctattaacat 90  Q
    |||||||||||||||||||| ||||||||| ||||||  ||| |||||||||||||||||    
T  26771389 agacttgaatatagtcatatgtgtaggcttttgtactttgtcgttttatgctattaacat 26771448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 31 - 98
Target Start/End: Complemental strand, 28399167 - 28399100
Alignment:
Q  31 agacttgaatatagtcatatttgtaggcttatgtactccgtctttttatgctattaacatagatgatg 98  Q
    ||||||||||||||||||||||||| || ||||||||  | | ||||||||||||||||| |||||||    
T  28399167 agacttgaatatagtcatatttgtaagcatatgtactttgccgttttatgctattaacatggatgatg 28399100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 16 - 95
Target Start/End: Original strand, 47551363 - 47551442
Alignment:
Q  16 acatgagttttatgaagacttgaatatagtcatatttgtaggcttatgtactccgtctttttatgctattaacatagatg 95  Q
    |||||||| || || |||||||||||||||||||||||||||| ||  ||||  | | ||||||||||||||||||||||    
T  47551363 acatgagtattctggagacttgaatatagtcatatttgtaggcatagatactttgccattttatgctattaacatagatg 47551442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 31 - 93
Target Start/End: Original strand, 171303 - 171365
Alignment:
Q  31 agacttgaatatagtcatatttgtaggcttatgtactccgtctttttatgctattaacataga 93  Q
    ||||||||||||| |||||| ||||||||| ||||||  ||| ||||||||||||||||||||    
T  171303 agacttgaatataatcatatatgtaggcttttgtactttgtcgttttatgctattaacataga 171365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 14 - 77
Target Start/End: Complemental strand, 6158885 - 6158820
Alignment:
Q  14 agacatgagttttatgaagacttgaatatagtcatatttgtaggcttat--gtactccgtcttttt 77  Q
    |||||||||| || ||||||||||||||||||||||||||||||| |||  |||||||||| ||||    
T  6158885 agacatgagtattctgaagacttgaatatagtcatatttgtaggcatatcagtactccgtcgtttt 6158820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 12 - 58
Target Start/End: Original strand, 13999225 - 13999271
Alignment:
Q  12 agagacatgagttttatgaagacttgaatatagtcatatttgtaggc 58  Q
    |||||||||||| ||||| ||||||||||||||||||||||||||||    
T  13999225 agagacatgagtattatggagacttgaatatagtcatatttgtaggc 13999271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 38 - 95
Target Start/End: Original strand, 34566971 - 34567028
Alignment:
Q  38 aatatagtcatatttgtaggcttatgtactccgtctttttatgctattaacatagatg 95  Q
    ||||||||||||||||||||||||||||||  | | ||||||||||||||||| ||||    
T  34566971 aatatagtcatatttgtaggcttatgtactttgccgttttatgctattaacatggatg 34567028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 35 - 95
Target Start/End: Original strand, 8893579 - 8893639
Alignment:
Q  35 ttgaatatagtcatatttgtaggcttatgtactccgtctttttatgctattaacatagatg 95  Q
    |||||||||||||||| ||||||||| ||||||| ||  ||||||||||||||||| ||||    
T  8893579 ttgaatatagtcatatgtgtaggcttttgtactctgttgttttatgctattaacatggatg 8893639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 97
Target Start/End: Complemental strand, 45425330 - 45425247
Alignment:
Q  14 agacatgagttttatgaagacttgaatatagtcatatttgtaggcttatgtactccgtctttttatgctattaacatagatgat 97  Q
    |||||||| | ||||  ||| ||||||||| |||||||||||||| |||| |||  ||| ||||||||||||||||| ||||||    
T  45425330 agacatgaatattatagagaattgaatataatcatatttgtaggcatatgcacttagtcgttttatgctattaacatggatgat 45425247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 44 - 98
Target Start/End: Original strand, 20413094 - 20413148
Alignment:
Q  44 gtcatatttgtaggcttatgtactccgtctttttatgctattaacatagatgatg 98  Q
    ||||||||||||||| ||||||||  ||| ||||||||||||||||| |||||||    
T  20413094 gtcatatttgtaggcatatgtactttgtcgttttatgctattaacatggatgatg 20413148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 40 - 90
Target Start/End: Original strand, 37662648 - 37662698
Alignment:
Q  40 tatagtcatatttgtaggcttatgtactccgtctttttatgctattaacat 90  Q
    |||||||||||||||||||||| |||||  ||| |||||||||||||||||    
T  37662648 tatagtcatatttgtaggcttacgtactttgtcattttatgctattaacat 37662698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 38 - 95
Target Start/End: Original strand, 2350912 - 2350969
Alignment:
Q  38 aatatagtcatatttgtaggcttatgtactccgtctttttatgctattaacatagatg 95  Q
    ||||||||||||||||||||||| ||||||  | | ||||||||||||||||| ||||    
T  2350912 aatatagtcatatttgtaggcttttgtactttgccgttttatgctattaacatggatg 2350969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 38 - 95
Target Start/End: Complemental strand, 13691587 - 13691530
Alignment:
Q  38 aatatagtcatatttgtaggcttatgtactccgtctttttatgctattaacatagatg 95  Q
    |||||||||||||||||||||||||||| |  | | ||||||||||||||||| ||||    
T  13691587 aatatagtcatatttgtaggcttatgtattttgccgttttatgctattaacatggatg 13691530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 34 - 95
Target Start/End: Original strand, 29067333 - 29067394
Alignment:
Q  34 cttgaatatagtcatatttgtaggcttatgtactccgtctttttatgctattaacatagatg 95  Q
    |||||| |||||||||| ||||||||| ||||||  ||| ||||||||||||||||| ||||    
T  29067333 cttgaaaatagtcatatgtgtaggcttttgtactttgtcgttttatgctattaacatggatg 29067394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 97
Target Start/End: Original strand, 8937897 - 8937961
Alignment:
Q  33 acttgaatatagtcatatttgtaggcttatgtactccgtctttttatgctattaacatagatgat 97  Q
    |||||||||||||||||||| ||||| ||  ||||| ||| |||||||||||| |||| ||||||    
T  8937897 acttgaatatagtcatatttataggcataattactctgtcgttttatgctattgacatggatgat 8937961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 31 - 90
Target Start/End: Original strand, 33001800 - 33001859
Alignment:
Q  31 agacttgaatatagtcatatttgtaggcttatgtactccgtctttttatgctattaacat 90  Q
    |||||||||||||||||||||||||  |||||  |||  ||| |||||||||||||||||    
T  33001800 agacttgaatatagtcatatttgtattcttataaactttgtcattttatgctattaacat 33001859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 37 - 90
Target Start/End: Complemental strand, 10188709 - 10188656
Alignment:
Q  37 gaatatagtcatatttgtaggcttatgtactccgtct-ttttatgctattaacat 90  Q
    |||||||||||||||||||||  |||||||||| ||| |||||||||||||||||    
T  10188709 gaatatagtcatatttgtaggtatatgtactcc-tctgttttatgctattaacat 10188656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 25 - 91
Target Start/End: Original strand, 23791271 - 23791337
Alignment:
Q  25 ttatgaagacttgaatatagtcatatttgtaggcttatgtactccgtctttttatgctattaacata 91  Q
    ||||||| ||||||||||||||||||||||| | |||||| ||  ||  |||||| |||||||||||    
T  23791271 ttatgaacacttgaatatagtcatatttgtaagtttatgtgctttgttgttttatactattaacata 23791337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 42 - 95
Target Start/End: Complemental strand, 424104 - 424051
Alignment:
Q  42 tagtcatatttgtaggcttatgtactccgtctttttatgctattaacatagatg 95  Q
    ||||||||||||||||| || |||||  ||| ||||||||||||||||| ||||    
T  424104 tagtcatatttgtaggcataggtactttgtcgttttatgctattaacatggatg 424051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 90
Target Start/End: Complemental strand, 4870883 - 4870806
Alignment:
Q  13 gagacatgagttttatgaagacttgaatatagtcatatttgtaggcttatgtactccgtctttttatgctattaacat 90  Q
    ||||||||||| || || |||| |||||||||||||||||  |||| ||  ||||  ||| |||||||||||||||||    
T  4870883 gagacatgagtattctggagacatgaatatagtcatatttacaggcatagatactttgtcgttttatgctattaacat 4870806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 96
Target Start/End: Original strand, 10877634 - 10877695
Alignment:
Q  35 ttgaatatagtcatatttgtaggcttatgtactccgtctttttatgctattaacatagatga 96  Q
    |||||| ||||||||| ||||||||| ||||||  ||| ||||||||||||| ||| |||||    
T  10877634 ttgaatgtagtcatatgtgtaggcttttgtactttgtcgttttatgctattagcatcgatga 10877695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 95
Target Start/End: Complemental strand, 34659473 - 34659408
Alignment:
Q  30 aagacttgaatatagtcatatttgtaggcttatgtactccgtctttttatgctattaacatagatg 95  Q
    ||||||||||||||||||||  ||||||||| | ||||  | | ||||||||||||||||| ||||    
T  34659473 aagacttgaatatagtcataagtgtaggcttttttactttgccattttatgctattaacatggatg 34659408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 95
Target Start/End: Original strand, 38783353 - 38783414
Alignment:
Q  34 cttgaatatagtcatatttgtaggcttatgtactccgtctttttatgctattaacatagatg 95  Q
    ||||||||||||||||||| ||||| ||||||||  ||| ||||||  ||||||||| ||||    
T  38783353 cttgaatatagtcatatttataggcatatgtactatgtcattttatattattaacatggatg 38783414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 42 - 95
Target Start/End: Original strand, 44517457 - 44517510
Alignment:
Q  42 tagtcatatttgtaggcttatgtactccgtctttttatgctattaacatagatg 95  Q
    ||||||||||||||||| |||||||| |  | ||||||||||||||||| ||||    
T  44517457 tagtcatatttgtaggcatatgtacttcaccgttttatgctattaacatggatg 44517510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 42 - 90
Target Start/End: Original strand, 3233080 - 3233128
Alignment:
Q  42 tagtcatatttgtaggcttatgtactccgtctttttatgctattaacat 90  Q
    ||||||||||||||||| ||||||||  | | |||||||||||||||||    
T  3233080 tagtcatatttgtaggcatatgtactttgccgttttatgctattaacat 3233128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 31 - 95
Target Start/End: Complemental strand, 9298254 - 9298190
Alignment:
Q  31 agacttgaatatagtcatatttgtaggcttatgtactccgtctttttatgctattaacatagatg 95  Q
    ||||||||||||| |||||||| ||||| || |||||  ||| |||||| |||||||||| ||||    
T  9298254 agacttgaatataatcatatttataggcataggtactttgtcattttatactattaacatggatg 9298190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 42 - 98
Target Start/End: Complemental strand, 13488348 - 13488292
Alignment:
Q  42 tagtcatatttgtaggcttatgtactccgtctttttatgctattaacatagatgatg 98  Q
    ||||||||||||||||| || |||||  | | ||||||||||||||||| |||||||    
T  13488348 tagtcatatttgtaggcataggtactttgccgttttatgctattaacatggatgatg 13488292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 11 - 87
Target Start/End: Complemental strand, 22031953 - 22031877
Alignment:
Q  11 cagagacatgagttttatgaagacttgaatatagtcatatttgtaggcttatgtactccgtctttttatgctattaa 87  Q
    ||||||||||||| ||  | ||||||||||||| |||||| ||||| ||| ||||||  ||| ||||||| ||||||    
T  22031953 cagagacatgagtattccggagacttgaatataatcatatgtgtagacttttgtactttgtcgttttatgatattaa 22031877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 42 - 98
Target Start/End: Complemental strand, 45193440 - 45193384
Alignment:
Q  42 tagtcatatttgtaggcttatgtactccgtctttttatgctattaacatagatgatg 98  Q
    ||||||||||||||||| || |||||  | | ||||||||||||||||| |||||||    
T  45193440 tagtcatatttgtaggcataagtactttgccgttttatgctattaacatggatgatg 45193384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 31 - 95
Target Start/End: Original strand, 47392419 - 47392483
Alignment:
Q  31 agacttgaatatagtcatatttgtaggcttatgtactccgtctttttatgctattaacatagatg 95  Q
    |||||||||||||||||||| |||| |||| ||||||  ||| ||||| | ||||||||| ||||    
T  47392419 agacttgaatatagtcatatgtgtatgcttttgtactttgtcgttttacgttattaacatggatg 47392483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 46; Significance: 3e-17; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 13 - 98
Target Start/End: Complemental strand, 12654159 - 12654074
Alignment:
Q  13 gagacatgagttttatgaagacttgaatatagtcatatttgtaggcttatgtactccgtctttttatgctattaacatagatgatg 98  Q
    ||||||||||| ||  | |||||||||||||||||||||||||||| |||||| |  ||| ||||||||||||||||| |||||||    
T  12654159 gagacatgagtattccggagacttgaatatagtcatatttgtaggcatatgtattttgtcgttttatgctattaacatggatgatg 12654074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 31 - 97
Target Start/End: Original strand, 3338089 - 3338155
Alignment:
Q  31 agacttgaatatagtcatatttgtaggcttatgtactccgtctttttatgctattaacatagatgat 97  Q
    ||||||||||||| |||||||||||||||||||||||  ||| ||||||| ||||||||| ||||||    
T  3338089 agacttgaatatattcatatttgtaggcttatgtactatgtcattttatgatattaacatggatgat 3338155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 38 - 90
Target Start/End: Original strand, 34020893 - 34020945
Alignment:
Q  38 aatatagtcatatttgtaggcttatgtactccgtctttttatgctattaacat 90  Q
    ||||||||||||||||||||||||||||||  ||| |||||||||||||||||    
T  34020893 aatatagtcatatttgtaggcttatgtactttgtcgttttatgctattaacat 34020945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 31 - 95
Target Start/End: Original strand, 8644511 - 8644575
Alignment:
Q  31 agacttgaatatagtcatatttgtaggcttatgtactccgtctttttatgctattaacatagatg 95  Q
    |||||| ||||||||||||| ||||||||| ||||||  ||| ||||||||||||||||| ||||    
T  8644511 agactttaatatagtcatatgtgtaggcttttgtactttgtcgttttatgctattaacatggatg 8644575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 31 - 98
Target Start/End: Original strand, 4660726 - 4660793
Alignment:
Q  31 agacttgaatatagtcatatttgtaggcttatgtactccgtctttttatgctattaacatagatgatg 98  Q
    |||| ||| |||| |||||||||||||| ||||||||  ||| ||||||||||||||||| |||||||    
T  4660726 agacatgagtataatcatatttgtaggcatatgtactttgtcgttttatgctattaacatggatgatg 4660793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 31 - 98
Target Start/End: Complemental strand, 12481202 - 12481135
Alignment:
Q  31 agacttgaatatagtcatatttgtaggcttatgtactccgtctttttatgctattaacatagatgatg 98  Q
    |||||||||||||||||||||||||||| || ||||   | | ||||||||||||||||| |||||||    
T  12481202 agacttgaatatagtcatatttgtaggcataggtaccttgccgttttatgctattaacatggatgatg 12481135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 28 - 95
Target Start/End: Complemental strand, 15127964 - 15127897
Alignment:
Q  28 tgaagacttgaatatagtcatatttgtaggcttatgtactccgtctttttatgctattaacatagatg 95  Q
    |||||||||||| |||||||||| ||||||||| ||||||| ||  ||||||| ||||||||| ||||    
T  15127964 tgaagacttgaacatagtcatatgtgtaggcttctgtactctgttgttttatgttattaacatggatg 15127897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 31 - 98
Target Start/End: Original strand, 30813355 - 30813422
Alignment:
Q  31 agacttgaatatagtcatatttgtaggcttatgtactccgtctttttatgctattaacatagatgatg 98  Q
    |||||||||||||||||||||||||||| || ||||   | | ||||||||||||||||| |||||||    
T  30813355 agacttgaatatagtcatatttgtaggcataggtaccttggcgttttatgctattaacatggatgatg 30813422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 29 - 95
Target Start/End: Complemental strand, 33541364 - 33541298
Alignment:
Q  29 gaagacttgaatatagtcatatttgtaggcttatgtactccgtctttttatgctattaacatagatg 95  Q
    ||||| || ||||||||||| ||||||||||||||||||  ||| ||| ||||||||||||| ||||    
T  33541364 gaagattttaatatagtcatgtttgtaggcttatgtactttgtcgtttcatgctattaacatggatg 33541298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 42 - 98
Target Start/End: Complemental strand, 1106679 - 1106623
Alignment:
Q  42 tagtcatatttgtaggcttatgtactccgtctttttatgctattaacatagatgatg 98  Q
    ||||||||||||||||| ||||||||  | | ||||||||||||||||| |||||||    
T  1106679 tagtcatatttgtaggcatatgtactttgccgttttatgctattaacatggatgatg 1106623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 31 - 95
Target Start/End: Complemental strand, 5417055 - 5416991
Alignment:
Q  31 agacttgaatatagtcatatttgtaggcttatgtactccgtctttttatgctattaacatagatg 95  Q
    |||||||||||||||||||| |||| |||| ||||||  | | ||||||||||||||||| ||||    
T  5417055 agacttgaatatagtcatatgtgtatgcttttgtactttgccgttttatgctattaacatggatg 5416991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 35 - 95
Target Start/End: Complemental strand, 8978575 - 8978515
Alignment:
Q  35 ttgaatatagtcatatttgtaggcttatgtactccgtctttttatgctattaacatagatg 95  Q
    |||||||||||||||||||||||| ||||||||  ||| ||||||| ||| ||||| ||||    
T  8978575 ttgaatatagtcatatttgtaggcatatgtactatgtcgttttatgttatgaacatggatg 8978515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 31 - 87
Target Start/End: Original strand, 20496476 - 20496532
Alignment:
Q  31 agacttgaatatagtcatatttgtaggcttatgtactccgtctttttatgctattaa 87  Q
    |||||||||||||||||||| ||||||||| ||||||  | | ||||||||||||||    
T  20496476 agacttgaatatagtcatatgtgtaggcttttgtactttgccgttttatgctattaa 20496532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 31 - 90
Target Start/End: Complemental strand, 14782978 - 14782919
Alignment:
Q  31 agacttgaatatagtcatatttgtaggcttatgtactccgtctttttatgctattaacat 90  Q
    |||| ||||||||||||||||||||||| || |||||  | | |||||||||||||||||    
T  14782978 agacatgaatatagtcatatttgtaggcataggtactttgccattttatgctattaacat 14782919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 32 - 95
Target Start/End: Complemental strand, 20028537 - 20028474
Alignment:
Q  32 gacttgaatatagtcatatttgtaggcttatgtactccgtctttttatgctattaacatagatg 95  Q
    ||||||||||||||||||||||||||| ||| || || | | |||||| |||||||||| ||||    
T  20028537 gacttgaatatagtcatatttgtaggcatatatattctgccgttttatactattaacattgatg 20028474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 95
Target Start/End: Original strand, 7049526 - 7049592
Alignment:
Q  29 gaagacttgaatatagtcatatttgtaggcttatgtactccgtctttttatgctattaacatagatg 95  Q
    ||||| || ||||||||||||| ||||||| | ||||||  ||| ||||||||||||||||| ||||    
T  7049526 gaagatttaaatatagtcatatgtgtaggcatttgtactttgtcgttttatgctattaacatggatg 7049592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 38 - 95
Target Start/End: Original strand, 20845298 - 20845355
Alignment:
Q  38 aatatagtcatatttgtaggcttatgtactccgtctttttatgctattaacatagatg 95  Q
    ||||||||||||||||||| | | ||||||  ||| ||||||||||||||||| ||||    
T  20845298 aatatagtcatatttgtagacatttgtactttgtcgttttatgctattaacatggatg 20845355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 42 - 95
Target Start/End: Original strand, 31705474 - 31705527
Alignment:
Q  42 tagtcatatttgtaggcttatgtactccgtctttttatgctattaacatagatg 95  Q
    ||||||||||||||||| || |||||  ||  ||||||||||||||||||||||    
T  31705474 tagtcatatttgtaggcataggtactttgttgttttatgctattaacatagatg 31705527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 88
Target Start/End: Original strand, 32804578 - 32804635
Alignment:
Q  31 agacttgaatatagtcatatttgtaggcttatgtactccgtctttttatgctattaac 88  Q
    ||||||||||||||| |||| ||||||||| ||||||  ||  |||||||||||||||    
T  32804578 agacttgaatatagttatatgtgtaggcttttgtactttgttgttttatgctattaac 32804635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 42 - 98
Target Start/End: Complemental strand, 21507666 - 21507610
Alignment:
Q  42 tagtcatatttgtaggcttatgtactccgtctttttatgctattaacatagatgatg 98  Q
    ||||||||||||||||| || |||||  | | ||||||||||||||||| |||||||    
T  21507666 tagtcatatttgtaggcataggtactttgccgttttatgctattaacatggatgatg 21507610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 44; Significance: 5e-16; HSPs: 43)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 16 - 95
Target Start/End: Complemental strand, 6082277 - 6082198
Alignment:
Q  16 acatgagttttatgaagacttgaatatagtcatatttgtaggcttatgtactccgtctttttatgctattaacatagatg 95  Q
    |||||||| || || |||||||||||||||||||||||||||| ||||||||  | | ||||||||||||||||| ||||    
T  6082277 acatgagtattctggagacttgaatatagtcatatttgtaggcatatgtactttgccgttttatgctattaacatggatg 6082198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 38 - 95
Target Start/End: Complemental strand, 33020751 - 33020694
Alignment:
Q  38 aatatagtcatatttgtaggcttatgtactccgtctttttatgctattaacatagatg 95  Q
    ||||||||||||||||||||||||||||||  ||| ||||||||||||||||| ||||    
T  33020751 aatatagtcatatttgtaggcttatgtactttgtcattttatgctattaacatggatg 33020694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 16 - 95
Target Start/End: Original strand, 31932530 - 31932609
Alignment:
Q  16 acatgagttttatgaagacttgaatatagtcatatttgtaggcttatgtactccgtctttttatgctattaacatagatg 95  Q
    |||||||| || ||||| |||||||||| |||||||||||||| |||||||||  |  ||||||||||||||||| ||||    
T  31932530 acatgagtattttgaaggcttgaatataatcatatttgtaggcatatgtactctattgttttatgctattaacatggatg 31932609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 38 - 95
Target Start/End: Original strand, 23926331 - 23926388
Alignment:
Q  38 aatatagtcatatttgtaggcttatgtactccgtctttttatgctattaacatagatg 95  Q
    ||||||||||||||||||||||||||||||  | | ||| ||||||||||||||||||    
T  23926331 aatatagtcatatttgtaggcttatgtactttgccgtttgatgctattaacatagatg 23926388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 98
Target Start/End: Complemental strand, 29589210 - 29589125
Alignment:
Q  13 gagacatgagttttatgaagacttgaatatagtcatatttgtaggcttatgtactccgtctttttatgctattaacatagatgatg 98  Q
    ||||||||||| || || |||||| ||||||||||||| |||| ||||  |||||  ||| ||||||||||||||||| |||||||    
T  29589210 gagacatgagtattctggagacttaaatatagtcatatgtgtatgctttagtactttgtcgttttatgctattaacatggatgatg 29589125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 11 - 95
Target Start/End: Original strand, 5814609 - 5814693
Alignment:
Q  11 cagagacatgagttttatgaagacttgaatatagtcatatttgtaggcttatgtactccgtctttttatgctattaacatagatg 95  Q
    ||||||||||||| || || |||||||||||||||||||||||||||| ||  ||||    | ||||||||||||||||| ||||    
T  5814609 cagagacatgagtattctggagacttgaatatagtcatatttgtaggcataaatacttttccattttatgctattaacatggatg 5814693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 11 - 95
Target Start/End: Original strand, 7060592 - 7060676
Alignment:
Q  11 cagagacatgagttttatgaagacttgaatatagtcatatttgtaggcttatgtactccgtctttttatgctattaacatagatg 95  Q
    ||||||||||||| ||  | |||| ||||||||||||||||||||||| || |||||   || ||||||||||||||||| ||||    
T  7060592 cagagacatgagtattccggagacatgaatatagtcatatttgtaggcataggtactttatcgttttatgctattaacatggatg 7060676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 31 - 95
Target Start/End: Complemental strand, 46775689 - 46775625
Alignment:
Q  31 agacttgaatatagtcatatttgtaggcttatgtactccgtctttttatgctattaacatagatg 95  Q
    ||||||||||||| |||||| ||||||||| ||| ||  ||| ||||||||||||||||||||||    
T  46775689 agacttgaatataatcatatgtgtaggcttttgtgctttgtcgttttatgctattaacatagatg 46775625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 31 - 98
Target Start/End: Original strand, 38434881 - 38434948
Alignment:
Q  31 agacttgaatatagtcatatttgtaggcttatgtactccgtctttttatgctattaacatagatgatg 98  Q
    |||||| ||||||||||||| |||||||||  |||||  ||| ||||||||||||||||| |||||||    
T  38434881 agacttaaatatagtcatatgtgtaggctttagtactttgtcattttatgctattaacatggatgatg 38434948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 95
Target Start/End: Complemental strand, 477862 - 477780
Alignment:
Q  13 gagacatgagttttatgaagacttgaatatagtcatatttgtaggcttatgtactccgtctttttatgctattaacatagatg 95  Q
    ||||||||||| ||  |||||  ||||||||||||||||||||||| || |||||  | | ||||||||||||||||| ||||    
T  477862 gagacatgagtattccgaagaaatgaatatagtcatatttgtaggcgtaggtactttgacgttttatgctattaacatggatg 477780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 95
Target Start/End: Original strand, 22757365 - 22757447
Alignment:
Q  13 gagacatgagttttatgaagacttgaatatagtcatatttgtaggcttatgtactccgtctttttatgctattaacatagatg 95  Q
    ||||||||||| ||  | |||| ||||||||||||||||||||||| || |||||  | | ||||||||||||||||| ||||    
T  22757365 gagacatgagtattccggagacatgaatatagtcatatttgtaggcataggtacttagccgttttatgctattaacatggatg 22757447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 31 - 97
Target Start/End: Complemental strand, 38943980 - 38943914
Alignment:
Q  31 agacttgaatatagtcatatttgtaggcttatgtactccgtctttttatgctattaacatagatgat 97  Q
    |||| ||||||||||||||||||||||| ||  ||||  ||| ||||||||||||||||| ||||||    
T  38943980 agacatgaatatagtcatatttgtaggcataaatactttgtcgttttatgctattaacatggatgat 38943914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 31 - 89
Target Start/End: Original strand, 47923544 - 47923602
Alignment:
Q  31 agacttgaatatagtcatatttgtaggcttatgtactccgtctttttatgctattaaca 89  Q
    |||||||||||||||||||||||||||||||| ||||    | ||||||||||||||||    
T  47923544 agacttgaatatagtcatatttgtaggcttatctactttaccattttatgctattaaca 47923602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 38 - 95
Target Start/End: Original strand, 3673778 - 3673835
Alignment:
Q  38 aatatagtcatatttgtaggcttatgtactccgtctttttatgctattaacatagatg 95  Q
    ||||||||||||||||||||||| ||||||  | | ||||||||||||||||| ||||    
T  3673778 aatatagtcatatttgtaggcttgtgtactttgccgttttatgctattaacatggatg 3673835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 58
Target Start/End: Complemental strand, 40198401 - 40198356
Alignment:
Q  13 gagacatgagttttatgaagacttgaatatagtcatatttgtaggc 58  Q
    |||| |||||| ||||||| ||||||||||||||||||||||||||    
T  40198401 gagatatgagtattatgaaaacttgaatatagtcatatttgtaggc 40198356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 38 - 95
Target Start/End: Complemental strand, 50981538 - 50981481
Alignment:
Q  38 aatatagtcatatttgtaggcttatgtactccgtctttttatgctattaacatagatg 95  Q
    ||||||||||||||||||||||||||||||  ||  ||||||| ||||||||| ||||    
T  50981538 aatatagtcatatttgtaggcttatgtactttgttgttttatgatattaacatggatg 50981481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 42 - 98
Target Start/End: Original strand, 8712816 - 8712872
Alignment:
Q  42 tagtcatatttgtaggcttatgtactccgtctttttatgctattaacatagatgatg 98  Q
    ||||||||||||||||| || |||||  ||| ||||||||||||||||| |||||||    
T  8712816 tagtcatatttgtaggcataagtactttgtcgttttatgctattaacatggatgatg 8712872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 31 - 95
Target Start/End: Original strand, 15182757 - 15182821
Alignment:
Q  31 agacttgaatatagtcatatttgtaggcttatgtactccgtctttttatgctattaacatagatg 95  Q
    ||||||||||||| ||| |||||||||| ||||||||  ||| || ||||||||||| |||||||    
T  15182757 agacttgaatatattcacatttgtaggcatatgtactatgtcgttgtatgctattaatatagatg 15182821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 38 - 98
Target Start/End: Complemental strand, 35658355 - 35658295
Alignment:
Q  38 aatatagtcatatttgtaggcttatgtactccgtctttttatgctattaacatagatgatg 98  Q
    ||||||||||||||||||  ||||||||||  ||  ||||||||||||||||| |||||||    
T  35658355 aatatagtcatatttgtaaacttatgtactttgttgttttatgctattaacatggatgatg 35658295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 12 - 68
Target Start/End: Original strand, 41837595 - 41837651
Alignment:
Q  12 agagacatgagttttatgaagacttgaatatagtcatatttgtaggcttatgtactc 68  Q
    |||||||||||| ||  ||||||||||||||||||| |||||||||| || ||||||    
T  41837595 agagacatgagtattccgaagacttgaatatagtcacatttgtaggcataagtactc 41837651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 31 - 95
Target Start/End: Original strand, 43157060 - 43157124
Alignment:
Q  31 agacttgaatatagtcatatttgtaggcttatgtactccgtctttttatgctattaacatagatg 95  Q
    |||||| ||||||||||||| |||||||||  |||||  ||| ||||||||||||||||| ||||    
T  43157060 agacttaaatatagtcatatgtgtaggctttagtactttgtcgttttatgctattaacatggatg 43157124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 39 - 95
Target Start/End: Original strand, 47466208 - 47466264
Alignment:
Q  39 atatagtcatatttgtaggcttatgtactccgtctttttatgctattaacatagatg 95  Q
    ||||||||||||||||||| |||||||||  | | ||||||||||||||||| ||||    
T  47466208 atatagtcatatttgtaggtttatgtactttgccgttttatgctattaacatggatg 47466264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 31 - 95
Target Start/End: Original strand, 51152413 - 51152477
Alignment:
Q  31 agacttgaatatagtcatatttgtaggcttatgtactccgtctttttatgctattaacatagatg 95  Q
    |||| |||||||||||||||||||||||  |||||||  | | ||||||||||||||||| ||||    
T  51152413 agacatgaatatagtcatatttgtaggcaaatgtactttgccgttttatgctattaacatggatg 51152477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 31 - 98
Target Start/End: Complemental strand, 26742295 - 26742228
Alignment:
Q  31 agacttgaatatagtcatatttgtaggcttatgtactccgtctttttatgctattaacatagatgatg 98  Q
    |||| ||||||||||||||||||||||| ||| || |  | | ||||||||||||||||| |||||||    
T  26742295 agacatgaatatagtcatatttgtaggcatatatattttgccgttttatgctattaacatggatgatg 26742228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 65
Target Start/End: Complemental strand, 10680833 - 10680803
Alignment:
Q  35 ttgaatatagtcatatttgtaggcttatgta 65  Q
    |||||||||||||||||||||||||||||||    
T  10680833 ttgaatatagtcatatttgtaggcttatgta 10680803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 65
Target Start/End: Complemental strand, 10716121 - 10716091
Alignment:
Q  35 ttgaatatagtcatatttgtaggcttatgta 65  Q
    |||||||||||||||||||||||||||||||    
T  10716121 ttgaatatagtcatatttgtaggcttatgta 10716091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 65
Target Start/End: Complemental strand, 10894473 - 10894443
Alignment:
Q  35 ttgaatatagtcatatttgtaggcttatgta 65  Q
    |||||||||||||||||||||||||||||||    
T  10894473 ttgaatatagtcatatttgtaggcttatgta 10894443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 65
Target Start/End: Complemental strand, 10929891 - 10929861
Alignment:
Q  35 ttgaatatagtcatatttgtaggcttatgta 65  Q
    |||||||||||||||||||||||||||||||    
T  10929891 ttgaatatagtcatatttgtaggcttatgta 10929861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 65
Target Start/End: Original strand, 17220072 - 17220102
Alignment:
Q  35 ttgaatatagtcatatttgtaggcttatgta 65  Q
    |||||||||||||||||||||||||||||||    
T  17220072 ttgaatatagtcatatttgtaggcttatgta 17220102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 90
Target Start/End: Complemental strand, 26624035 - 26623977
Alignment:
Q  32 gacttgaatatagtcatatttgtaggcttatgtactccgtctttttatgctattaacat 90  Q
    ||||||||||||||||||||||||| | |||||| |  ||| || ||||||||||||||    
T  26624035 gacttgaatatagtcatatttgtagacatatgtattatgtcattgtatgctattaacat 26623977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 42 - 95
Target Start/End: Complemental strand, 11210125 - 11210072
Alignment:
Q  42 tagtcatatttgtaggcttatgtactccgtctttttatgctattaacatagatg 95  Q
    ||||||||||||||||| ||||||||  ||| ||||||||||||| ||| ||||    
T  11210125 tagtcatatttgtaggcatatgtactttgtcgttttatgctattatcatggatg 11210072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 38 - 95
Target Start/End: Original strand, 11817346 - 11817403
Alignment:
Q  38 aatatagtcatatttgtaggcttatgtactccgtctttttatgctattaacatagatg 95  Q
    ||||||||||||| ||||||||||||||||  | | |||||| ||||||| |||||||    
T  11817346 aatatagtcatatatgtaggcttatgtactttgccgttttattctattaaaatagatg 11817403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 98
Target Start/End: Complemental strand, 55600367 - 55600302
Alignment:
Q  33 acttgaatatagtcatatttgtaggcttatgtactccgtctttttatgctattaacatagatgatg 98  Q
    ||||||||||| |||||||||||||| ||  ||||  | | ||||||||||||||||| |||||||    
T  55600367 acttgaatataatcatatttgtaggcataaatactttgccgttttatgctattaacatggatgatg 55600302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 38 - 98
Target Start/End: Original strand, 4634573 - 4634633
Alignment:
Q  38 aatatagtcatatttgtaggcttatgtactccgtctttttatgctattaacatagatgatg 98  Q
    ||||||||||||| |||||||   ||||||  ||| ||||||||||||||||| |||||||    
T  4634573 aatatagtcatatgtgtaggcaattgtactttgtcgttttatgctattaacatggatgatg 4634633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 31 - 95
Target Start/End: Complemental strand, 7242617 - 7242553
Alignment:
Q  31 agacttgaatatagtcatatttgtaggcttatgtactccgtctttttatgctattaacatagatg 95  Q
    ||||||||||||||||| || ||||||||| |||| |  ||| |||||| |||||||||| ||||    
T  7242617 agacttgaatatagtcagatgtgtaggcttttgtattttgtcgttttatactattaacatggatg 7242553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 30 - 90
Target Start/End: Complemental strand, 9255135 - 9255075
Alignment:
Q  30 aagacttgaatatagtcatatttgtaggcttatgtactccgtctttttatgctattaacat 90  Q
    |||| ||||| ||| |||||||||||||| ||||||||  ||  |||||||||||||||||    
T  9255135 aagatttgaacataatcatatttgtaggcatatgtactatgttgttttatgctattaacat 9255075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 31 - 95
Target Start/End: Original strand, 14346714 - 14346778
Alignment:
Q  31 agacttgaatatagtcatatttgtaggcttatgtactccgtctttttatgctattaacatagatg 95  Q
    |||||| ||||||||||||| |||||||||  |||||  | | ||||||||||||||||| ||||    
T  14346714 agacttaaatatagtcatatgtgtaggctttagtactttgccgttttatgctattaacatggatg 14346778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 37 - 65
Target Start/End: Complemental strand, 22066881 - 22066853
Alignment:
Q  37 gaatatagtcatatttgtaggcttatgta 65  Q
    |||||||||||||||||||||||||||||    
T  22066881 gaatatagtcatatttgtaggcttatgta 22066853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 95
Target Start/End: Original strand, 31311761 - 31311817
Alignment:
Q  39 atatagtcatatttgtaggcttatgtactccgtctttttatgctattaacatagatg 95  Q
    |||||||||| | ||||||||| ||||||  ||| ||||||||||||||||| ||||    
T  31311761 atatagtcatgtgtgtaggcttttgtactttgtcgttttatgctattaacatggatg 31311817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 34 - 90
Target Start/End: Original strand, 31994314 - 31994370
Alignment:
Q  34 cttgaatatagtcatatttgtaggcttatgtactccgtctttttatgctattaacat 90  Q
    |||||||||| ||||||||||| || ||||||||  | | |||||||||||||||||    
T  31994314 cttgaatataatcatatttgtacgcatatgtactttgccgttttatgctattaacat 31994370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 31 - 95
Target Start/End: Complemental strand, 36124180 - 36124116
Alignment:
Q  31 agacttgaatatagtcatatttgtaggcttatgtactccgtctttttatgctattaacatagatg 95  Q
    |||| ||||||||||||||||||||||| ||||| ||  | |  |||||||||||||||| ||||    
T  36124180 agacatgaatatagtcatatttgtaggcatatgtgctttgccgatttatgctattaacatggatg 36124116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 42 - 98
Target Start/End: Original strand, 39523719 - 39523775
Alignment:
Q  42 tagtcatatttgtaggcttatgtactccgtctttttatgctattaacatagatgatg 98  Q
    ||||||||||||||||| |||||| |  | | ||||||||||||||||| |||||||    
T  39523719 tagtcatatttgtaggcatatgtaatttgccgttttatgctattaacatggatgatg 39523775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 31 - 99
Target Start/End: Original strand, 40861221 - 40861289
Alignment:
Q  31 agacttgaatatagtcatatttgtaggcttatgtactccgtctttttatgctattaacatagatgatgc 99  Q
    |||||| |||||||||| || |||| ||||  |||||  ||| ||||||||||||||||| ||||||||    
T  40861221 agacttaaatatagtcagatgtgtaagctttagtactttgtcgttttatgctattaacatggatgatgc 40861289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1294 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold1294
Description:

Target: scaffold1294; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 32 - 94
Target Start/End: Original strand, 1059 - 1121
Alignment:
Q  32 gacttgaatatagtcatatttgtaggcttatgtactccgtctttttatgctattaacatagat 94  Q
    ||||||||||||||||||| ||||||||| ||||||  ||| |||||||||||||||||||||    
T  1059 gacttgaatatagtcatatgtgtaggcttttgtactttgtcgttttatgctattaacatagat 1121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 36)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 13 - 95
Target Start/End: Complemental strand, 37375896 - 37375814
Alignment:
Q  13 gagacatgagttttatgaagacttgaatatagtcatatttgtaggcttatgtactccgtctttttatgctattaacatagatg 95  Q
    ||||||||||| ||  | |||| ||||||||||||||||||||||| ||||||||  ||| ||||||||||||||||| ||||    
T  37375896 gagacatgagtattcaggagacatgaatatagtcatatttgtaggcatatgtactttgtcgttttatgctattaacatggatg 37375814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 31 - 95
Target Start/End: Complemental strand, 46025878 - 46025814
Alignment:
Q  31 agacttgaatatagtcatatttgtaggcttatgtactccgtctttttatgctattaacatagatg 95  Q
    |||| ||||||||||||||||||||||| ||||||||  ||| ||||||||||||||||| ||||    
T  46025878 agacatgaatatagtcatatttgtaggcatatgtactttgtcgttttatgctattaacatggatg 46025814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 31 - 90
Target Start/End: Original strand, 32312850 - 32312909
Alignment:
Q  31 agacttgaatatagtcatatttgtaggcttatgtactccgtctttttatgctattaacat 90  Q
    ||||||||||||||||||||||| ||||||||||| |  ||| |||||||||||||||||    
T  32312850 agacttgaatatagtcatatttggaggcttatgtagtttgtcgttttatgctattaacat 32312909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 11 - 90
Target Start/End: Original strand, 46918662 - 46918741
Alignment:
Q  11 cagagacatgagttttatgaagacttgaatatagtcatatttgtaggcttatgtactccgtctttttatgctattaacat 90  Q
    ||||||||||||| || || |||||||||||||||||||| | ||||||| ||||||  | | |||||||||||||||||    
T  46918662 cagagacatgagtattttggagacttgaatatagtcatatgtataggcttttgtactttgccgttttatgctattaacat 46918741  T

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Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 13 - 95
Target Start/End: Complemental strand, 36719402 - 36719320
Alignment:
Q  13 gagacatgagttttatgaagacttgaatatagtcatatttgtaggcttatgtactccgtctttttatgctattaacatagatg 95  Q
    ||||||||||| ||  | |||| ||||||||||||||||||||||| || ||||| || | ||||||||||||||||| ||||    
T  36719402 gagacatgagtatttcggagacatgaatatagtcatatttgtaggcataagtacttcgccgttttatgctattaacatggatg 36719320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 38 - 95
Target Start/End: Complemental strand, 29804503 - 29804446
Alignment:
Q  38 aatatagtcatatttgtaggcttatgtactccgtctttttatgctattaacatagatg 95  Q
    ||||||||||||||||||||||||||||||  | | ||||||||||||||||| ||||    
T  29804503 aatatagtcatatttgtaggcttatgtactttgccgttttatgctattaacatggatg 29804446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 31 - 95
Target Start/End: Original strand, 3266675 - 3266739
Alignment:
Q  31 agacttgaatatagtcatatttgtaggcttatgtactccgtctttttatgctattaacatagatg 95  Q
    |||||| ||||||||||||||||||||| || |||||  ||| ||||||||||||||||| ||||    
T  3266675 agacttaaatatagtcatatttgtaggcataagtactttgtcgttttatgctattaacatggatg 3266739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 35 - 95
Target Start/End: Complemental strand, 6646428 - 6646368
Alignment:
Q  35 ttgaatatagtcatatttgtaggcttatgtactccgtctttttatgctattaacatagatg 95  Q
    |||||||||||||||||||||||| |||||||||   | ||||||||||||||||| ||||    
T  6646428 ttgaatatagtcatatttgtaggcatatgtactctaccattttatgctattaacatggatg 6646368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 39 - 90
Target Start/End: Complemental strand, 4621195 - 4621144
Alignment:
Q  39 atatagtcatatttgtaggcttatgtactccgtctttttatgctattaacat 90  Q
    |||||||||||||||||||| ||||||||  ||| |||||||||||||||||    
T  4621195 atatagtcatatttgtaggcatatgtactttgtcattttatgctattaacat 4621144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 31 - 98
Target Start/End: Original strand, 9137239 - 9137306
Alignment:
Q  31 agacttgaatatagtcatatttgtaggcttatgtactccgtctttttatgctattaacatagatgatg 98  Q
    |||||||||| ||||||||||||||| | || |||||  ||| ||||||||||||||||| |||||||    
T  9137239 agacttgaatttagtcatatttgtagacataagtactttgtcattttatgctattaacatggatgatg 9137306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 95
Target Start/End: Original strand, 45482335 - 45482417
Alignment:
Q  13 gagacatgagttttatgaagacttgaatatagtcatatttgtaggcttatgtactccgtctttttatgctattaacatagatg 95  Q
    ||||||||||| ||  | |||||||||||||||||||||||||||  ||  ||||  ||| ||||||||||||||||| ||||    
T  45482335 gagacatgagtattccggagacttgaatatagtcatatttgtaggtatagatactttgtcgttttatgctattaacatggatg 45482417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 38 - 95
Target Start/End: Complemental strand, 14733889 - 14733832
Alignment:
Q  38 aatatagtcatatttgtaggcttatgtactccgtctttttatgctattaacatagatg 95  Q
    |||||||||||||||||||||||||| |||  | | ||||||||||||||||| ||||    
T  14733889 aatatagtcatatttgtaggcttatgcactttgccattttatgctattaacatggatg 14733832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 31 - 64
Target Start/End: Original strand, 15336059 - 15336092
Alignment:
Q  31 agacttgaatatagtcatatttgtaggcttatgt 64  Q
    ||||||||||||||||||||||||||||||||||    
T  15336059 agacttgaatatagtcatatttgtaggcttatgt 15336092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 30 - 67
Target Start/End: Original strand, 29352508 - 29352545
Alignment:
Q  30 aagacttgaatatagtcatatttgtaggcttatgtact 67  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  29352508 aagacttgaatatagtcatatttgtaggcatatgtact 29352545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 98
Target Start/End: Original strand, 5238215 - 5238299
Alignment:
Q  11 cagagacatgagttttatgaagacttgaatatagtcatatttgtaggcttatgtactccgtctttttatgctattaacatagatgatg 98  Q
    |||| |||||||| || ||| | |||||||||||||||||||||| || ||||||||  ||| ||||||| ||||||||| |||||||    
T  5238215 cagaaacatgagtattttgatggcttgaatatagtcatatttgta-gcatatgtact--gtcgttttatgttattaacatggatgatg 5238299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 31 - 95
Target Start/End: Original strand, 5684653 - 5684717
Alignment:
Q  31 agacttgaatatagtcatatttgtaggcttatgtactccgtctttttatgctattaacatagatg 95  Q
    |||| ||||||||||||||||| ||||| ||||||||  | | ||||||||||||||||| ||||    
T  5684653 agacatgaatatagtcatatttataggcatatgtactttgccgttttatgctattaacatggatg 5684717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 31 - 95
Target Start/End: Original strand, 5709703 - 5709767
Alignment:
Q  31 agacttgaatatagtcatatttgtaggcttatgtactccgtctttttatgctattaacatagatg 95  Q
    |||| ||||||||||||||||| ||||| ||||||||  | | ||||||||||||||||| ||||    
T  5709703 agacatgaatatagtcatatttataggcatatgtactttgccgttttatgctattaacatggatg 5709767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 38 - 98
Target Start/End: Complemental strand, 21552279 - 21552219
Alignment:
Q  38 aatatagtcatatttgtaggcttatgtactccgtctttttatgctattaacatagatgatg 98  Q
    ||||||||||||||||||||||||||||||  |   ||||||| ||||||||| |||||||    
T  21552279 aatatagtcatatttgtaggcttatgtactttgctgttttatgttattaacatggatgatg 21552219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 42 - 98
Target Start/End: Complemental strand, 22747321 - 22747265
Alignment:
Q  42 tagtcatatttgtaggcttatgtactccgtctttttatgctattaacatagatgatg 98  Q
    ||||||||||||||||| ||||||||  | | ||||||||||||||||| |||||||    
T  22747321 tagtcatatttgtaggcatatgtactttgccgttttatgctattaacatggatgatg 22747265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 38 - 102
Target Start/End: Original strand, 31724910 - 31724974
Alignment:
Q  38 aatatagtcatatttgtaggcttatgtactccgtctttttatgctattaacatagatgatgcaag 102  Q
    |||||| |||||||||||||| ||| ||||| ||| ||||||| ||||||||| |||||| ||||    
T  31724910 aatataatcatatttgtaggcatatttactctgtcgttttatgttattaacatggatgatacaag 31724974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 31 - 95
Target Start/End: Original strand, 38273187 - 38273251
Alignment:
Q  31 agacttgaatatagtcatatttgtaggcttatgtactccgtctttttatgctattaacatagatg 95  Q
    |||||||||||||||||||||||| ||| ||||||||  |   ||||||||||||||||| ||||    
T  38273187 agacttgaatatagtcatatttgttggcatatgtactttgctgttttatgctattaacatggatg 38273251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 95
Target Start/End: Original strand, 25531738 - 25531800
Alignment:
Q  33 acttgaatatagtcatatttgtaggcttatgtactccgtctttttatgctattaacatagatg 95  Q
    |||||||||||||||||||||||||| ||  ||||| ||   |||||||||||||||| ||||    
T  25531738 acttgaatatagtcatatttgtaggcatagatactctgttggtttatgctattaacatggatg 25531800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 42 - 95
Target Start/End: Original strand, 6667704 - 6667757
Alignment:
Q  42 tagtcatatttgtaggcttatgtactccgtctttttatgctattaacatagatg 95  Q
    ||||||||||||||||| ||||||||  | | ||||||||||||||||| ||||    
T  6667704 tagtcatatttgtaggcatatgtactttgccattttatgctattaacatggatg 6667757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 38 - 95
Target Start/End: Complemental strand, 21329122 - 21329065
Alignment:
Q  38 aatatagtcatatttgtaggcttatgtactccgtctttttatgctattaacatagatg 95  Q
    ||||||||||||||||||||||| || |||  | | ||||||||||||||||| ||||    
T  21329122 aatatagtcatatttgtaggcttgtgcactttgccgttttatgctattaacatggatg 21329065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 38 - 95
Target Start/End: Original strand, 32741048 - 32741105
Alignment:
Q  38 aatatagtcatatttgtaggcttatgtactccgtctttttatgctattaacatagatg 95  Q
    ||||||||||||||||||||| ||| ||||  ||  ||||||||||||||||| ||||    
T  32741048 aatatagtcatatttgtaggcatatatactttgttgttttatgctattaacatggatg 32741105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 38 - 95
Target Start/End: Original strand, 37399888 - 37399945
Alignment:
Q  38 aatatagtcatatttgtaggcttatgtactccgtctttttatgctattaacatagatg 95  Q
    ||||||||||||| ||||| | | ||||||  ||| ||||||||||||||||||||||    
T  37399888 aatatagtcatatgtgtagacatttgtactttgtcgttttatgctattaacatagatg 37399945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 38 - 95
Target Start/End: Complemental strand, 42603595 - 42603538
Alignment:
Q  38 aatatagtcatatttgtaggcttatgtactccgtctttttatgctattaacatagatg 95  Q
    ||||||||||||||||||||| || | |||  | | ||||||||||||||||||||||    
T  42603595 aatatagtcatatttgtaggcataggaactttgccgttttatgctattaacatagatg 42603538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 95
Target Start/End: Complemental strand, 43256385 - 43256325
Alignment:
Q  34 cttgaatatagtcatatttgtaggcttatgtactccgtctttttatgctattaacatagatg 95  Q
    ||||||||||||||| ||||||| |  || ||||| ||||||||||||||||||||| ||||    
T  43256385 cttgaatatagtcat-tttgtagacacatatactctgtctttttatgctattaacatggatg 43256325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 38 - 67
Target Start/End: Complemental strand, 45949503 - 45949474
Alignment:
Q  38 aatatagtcatatttgtaggcttatgtact 67  Q
    ||||||||||||||||||||||||||||||    
T  45949503 aatatagtcatatttgtaggcttatgtact 45949474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 11 - 95
Target Start/End: Complemental strand, 17473604 - 17473520
Alignment:
Q  11 cagagacatgagttttatgaagacttgaatatagtcatatttgtaggcttatgtactccgtctttttatgctattaacatagatg 95  Q
    ||||||||||||| ||  | ||||  ||||||||||||||||||| || ||||||||  | | |||||| |||||||||| ||||    
T  17473604 cagagacatgagtattccggagacaggaatatagtcatatttgtaagcatatgtactttgccattttatcctattaacatggatg 17473520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 11 - 95
Target Start/End: Original strand, 17579610 - 17579694
Alignment:
Q  11 cagagacatgagttttatgaagacttgaatatagtcatatttgtaggcttatgtactccgtctttttatgctattaacatagatg 95  Q
    ||||||||||||| ||  | ||||  ||||||||||||||||||| || ||||||||  | | |||||| |||||||||| ||||    
T  17579610 cagagacatgagtattccggagacaggaatatagtcatatttgtaagcatatgtactttgccattttatcctattaacatggatg 17579694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 35 - 95
Target Start/End: Original strand, 22751689 - 22751749
Alignment:
Q  35 ttgaatatagtcatatttgtaggcttatgtactccgtctttttatgctattaacatagatg 95  Q
    |||||||||||||||| ||||||||| ||||||    | ||||||| ||||||||||||||    
T  22751689 ttgaatatagtcatatgtgtaggcttttgtactttaccgttttatgttattaacatagatg 22751749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 31 - 95
Target Start/End: Original strand, 36350450 - 36350514
Alignment:
Q  31 agacttgaatatagtcatatttgtaggcttatgtactccgtctttttatgctattaacatagatg 95  Q
    |||||||||||| || |||| |||||| || ||||||  ||| ||||||||||||||||| ||||    
T  36350450 agacttgaatatggttatatgtgtaggtttttgtactttgtcattttatgctattaacatggatg 36350514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 38 - 98
Target Start/End: Original strand, 43483878 - 43483938
Alignment:
Q  38 aatatagtcatatttgtaggcttatgtactccgtctttttatgctattaacatagatgatg 98  Q
    ||||||||||||| |||||||||   ||||  ||| ||||||||||||||||| |||||||    
T  43483878 aatatagtcatatgtgtaggctttaatactttgtcgttttatgctattaacatggatgatg 43483938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 38 - 90
Target Start/End: Original strand, 47295497 - 47295549
Alignment:
Q  38 aatatagtcatatttgtaggcttatgtactccgtctttttatgctattaacat 90  Q
    |||||||| ||||||||| || ||||||||  ||| |||||||||||||||||    
T  47295497 aatatagtaatatttgtaagcatatgtactatgtcattttatgctattaacat 47295549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 38 - 98
Target Start/End: Original strand, 49167215 - 49167275
Alignment:
Q  38 aatatagtcatatttgtaggcttatgtactccgtctttttatgctattaacatagatgatg 98  Q
    ||||||||||||| ||||||| | ||||||  | | ||||||||||||||||| |||||||    
T  49167215 aatatagtcatatgtgtaggcatttgtactttgccgttttatgctattaacatggatgatg 49167275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 39)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 31 - 97
Target Start/End: Complemental strand, 32080594 - 32080528
Alignment:
Q  31 agacttgaatatagtcatatttgtaggcttatgtactccgtctttttatgctattaacatagatgat 97  Q
    |||||||||||||||||||||||||||| || ||||   ||||||||||||||||||||| ||||||    
T  32080594 agacttgaatatagtcatatttgtaggcgtaggtaccttgtctttttatgctattaacatggatgat 32080528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 31 - 98
Target Start/End: Original strand, 40797316 - 40797383
Alignment:
Q  31 agacttgaatatagtcatatttgtaggcttatgtactccgtctttttatgctattaacatagatgatg 98  Q
    |||||| ||||||||||||| |||||||||  |||||  ||| |||||||||||||||||||||||||    
T  40797316 agacttaaatatagtcatatgtgtaggctttagtactttgtcgttttatgctattaacatagatgatg 40797383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 98
Target Start/End: Original strand, 55455142 - 55455227
Alignment:
Q  13 gagacatgagttttatgaagacttgaatatagtcatatttgtaggcttatgtactccgtctttttatgctattaacatagatgatg 98  Q
    ||||||||||| ||  | |||| |||||||||||||||||||| || ||||||||  | | ||||||||||||||||| |||||||    
T  55455142 gagacatgagtattccggagacatgaatatagtcatatttgtaagcatatgtactttgccgttttatgctattaacatggatgatg 55455227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 31 - 95
Target Start/End: Complemental strand, 30156121 - 30156057
Alignment:
Q  31 agacttgaatatagtcatatttgtaggcttatgtactccgtctttttatgctattaacatagatg 95  Q
    |||| ||||||||||||||||||||||| ||| ||||  ||| ||||||||||||||||| ||||    
T  30156121 agacatgaatatagtcatatttgtaggcatatatactttgtcgttttatgctattaacatggatg 30156057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 39 - 98
Target Start/End: Complemental strand, 105870 - 105811
Alignment:
Q  39 atatagtcatatttgtaggcttatgtactccgtctttttatgctattaacatagatgatg 98  Q
    |||||||||||||||||||| || |||||  ||| ||||||||||||||||| |||||||    
T  105870 atatagtcatatttgtaggcataggtactttgtcgttttatgctattaacatggatgatg 105811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 12 - 87
Target Start/End: Complemental strand, 3961632 - 3961557
Alignment:
Q  12 agagacatgagttttatgaagacttgaatatagtcatatttgtaggcttatgtactccgtctttttatgctattaa 87  Q
    |||||||||| | ||||| |  ||||||||||||||||||||||||| ||| |||||| || ||||||| ||||||    
T  3961632 agagacatgaatattatggaagcttgaatatagtcatatttgtaggcatatatactccatcgttttatgttattaa 3961557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 31 - 98
Target Start/End: Original strand, 33637692 - 33637759
Alignment:
Q  31 agacttgaatatagtcatatttgtaggcttatgtactccgtctttttatgctattaacatagatgatg 98  Q
    |||||||||||||||||||||||||||| || ||||   | | ||||||||||||||||| |||||||    
T  33637692 agacttgaatatagtcatatttgtaggcataggtaccttgccattttatgctattaacatggatgatg 33637759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 11 - 90
Target Start/End: Complemental strand, 47587224 - 47587145
Alignment:
Q  11 cagagacatgagttttatgaagacttgaatatagtcatatttgtaggcttatgtactccgtctttttatgctattaacat 90  Q
    ||||||||  ||| ||||| | |||| || |||||||||||||||||||| | ||||| ||| |||||||||||||||||    
T  47587224 cagagacaaaagtattatggatacttaaaaatagtcatatttgtaggcttttatactctgtcgttttatgctattaacat 47587145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 31 - 98
Target Start/End: Complemental strand, 49627935 - 49627868
Alignment:
Q  31 agacttgaatatagtcatatttgtaggcttatgtactccgtctttttatgctattaacatagatgatg 98  Q
    |||| ||||||||||||||||||||||| || |||||  | | ||||||||||||||||| |||||||    
T  49627935 agacatgaatatagtcatatttgtaggcataggtactttgccgttttatgctattaacatggatgatg 49627868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 17 - 95
Target Start/End: Original strand, 4019867 - 4019945
Alignment:
Q  17 catgagttttatgaagacttgaatatagtcatatttgtaggcttatgtactccgtctttttatgctattaacatagatg 95  Q
    ||||||| || || ||||||||||||||| || | | ||||||||||||||  ||| ||||||||||||||||| ||||    
T  4019867 catgagtattctggagacttgaatatagtaatctgtataggcttatgtactttgtcgttttatgctattaacatggatg 4019945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 36 - 98
Target Start/End: Complemental strand, 40883701 - 40883639
Alignment:
Q  36 tgaatatagtcatatttgtaggcttatgtactccgtctttttatgctattaacatagatgatg 98  Q
    |||||||||||||||||||||||||  |||||  ||| ||||||||||||||||  |||||||    
T  40883701 tgaatatagtcatatttgtaggcttgggtactttgtcgttttatgctattaacacggatgatg 40883639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 29 - 87
Target Start/End: Complemental strand, 41598309 - 41598251
Alignment:
Q  29 gaagacttgaatatagtcatatttgtaggcttatgtactccgtctttttatgctattaa 87  Q
    ||||||||||||||| |||||||||||||| ||||||||| | | ||||||| ||||||    
T  41598309 gaagacttgaatataatcatatttgtaggcatatgtactctgccattttatgttattaa 41598251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 56
Target Start/End: Complemental strand, 44984711 - 44984671
Alignment:
Q  16 acatgagttttatgaagacttgaatatagtcatatttgtag 56  Q
    |||||||| || |||||||||||||||||||||||||||||    
T  44984711 acatgagtattttgaagacttgaatatagtcatatttgtag 44984671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 31 - 98
Target Start/End: Complemental strand, 913147 - 913080
Alignment:
Q  31 agacttgaatatagtcatatttgtaggcttatgtactccgtctttttatgctattaacatagatgatg 98  Q
    |||||| ||||||||||||| |||||||||  |||||  | | ||||||||||||||||| |||||||    
T  913147 agacttaaatatagtcatatgtgtaggctttagtactttgccgttttatgctattaacatggatgatg 913080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 32 - 95
Target Start/End: Original strand, 3312726 - 3312789
Alignment:
Q  32 gacttgaatatagtcatatttgtaggcttatgtactccgtctttttatgctattaacatagatg 95  Q
    ||||||||||||||||||||||||||| || ||| |  | | ||||||||||||||||| ||||    
T  3312726 gacttgaatatagtcatatttgtaggcataggtattttgccgttttatgctattaacatggatg 3312789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 31 - 90
Target Start/End: Complemental strand, 29776521 - 29776462
Alignment:
Q  31 agacttgaatatagtcatatttgtaggcttatgtactccgtctttttatgctattaacat 90  Q
    |||||||||||||||||||| || |||||| ||||||  ||| ||||| |||||||||||    
T  29776521 agacttgaatatagtcatatgtgcaggcttttgtactttgtcgttttacgctattaacat 29776462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 31 - 90
Target Start/End: Original strand, 34767269 - 34767328
Alignment:
Q  31 agacttgaatatagtcatatttgtaggcttatgtactccgtctttttatgctattaacat 90  Q
    |||||||||||||||| ||| ||||||||| ||||||  | | |||||||||||||||||    
T  34767269 agacttgaatatagtcttatgtgtaggcttttgtactttgccgttttatgctattaacat 34767328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 29 - 84
Target Start/End: Original strand, 37051875 - 37051930
Alignment:
Q  29 gaagacttgaatatagtcatatttgtaggcttatgtactccgtctttttatgctat 84  Q
    ||||| || ||||||||||||||||||||||||||||||  | | |||||||||||    
T  37051875 gaagattttaatatagtcatatttgtaggcttatgtactttgccgttttatgctat 37051930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 31 - 98
Target Start/End: Original strand, 40702718 - 40702785
Alignment:
Q  31 agacttgaatatagtcatatttgtaggcttatgtactccgtctttttatgctattaacatagatgatg 98  Q
    ||||||||||||||| ||||||||| |  ||||||||  ||| ||||||||| ||||||| |||||||    
T  40702718 agacttgaatatagttatatttgtatggatatgtactttgtcattttatgctcttaacatggatgatg 40702785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 31 - 90
Target Start/End: Complemental strand, 41868163 - 41868104
Alignment:
Q  31 agacttgaatatagtcatatttgtaggcttatgtactccgtctttttatgctattaacat 90  Q
    |||||||||||||||||||||||||| | || |||||  | | |||||||||||||||||    
T  41868163 agacttgaatatagtcatatttgtagacataggtactttgccgttttatgctattaacat 41868104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 87
Target Start/End: Original strand, 2148036 - 2148094
Alignment:
Q  29 gaagacttgaatatagtcatatttgtaggcttatgtactccgtctttttatgctattaa 87  Q
    |||||||||||||||||||||||||||| | | ||||||  | | ||||||||||||||    
T  2148036 gaagacttgaatatagtcatatttgtagacatttgtactttgccgttttatgctattaa 2148094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 91
Target Start/End: Complemental strand, 31628779 - 31628721
Alignment:
Q  33 acttgaatatagtcatatttgtaggcttatgtactccgtctttttatgctattaacata 91  Q
    ||||||||||||||||||||||||||| |||||    ||| | ||||||||||||||||    
T  31628779 acttgaatatagtcatatttgtaggctaatgtatcatgtcgtcttatgctattaacata 31628721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 67
Target Start/End: Original strand, 53427079 - 53427117
Alignment:
Q  29 gaagacttgaatatagtcatatttgtaggcttatgtact 67  Q
    |||||||||||||||||||||| ||||||||| ||||||    
T  53427079 gaagacttgaatatagtcatatgtgtaggcttttgtact 53427117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 95
Target Start/End: Original strand, 54240351 - 54240433
Alignment:
Q  13 gagacatgagttttatgaagacttgaatatagtcatatttgtaggcttatgtactccgtctttttatgctattaacatagatg 95  Q
    ||||||||| | ||| ||||| || ||||||||||||| ||||||| | |||| |  ||| |||||| |||||||||||||||    
T  54240351 gagacatgattattacgaagatttaaatatagtcatatgtgtaggcatttgtattttgtcgttttatactattaacatagatg 54240433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 42 - 95
Target Start/End: Original strand, 14585771 - 14585824
Alignment:
Q  42 tagtcatatttgtaggcttatgtactccgtctttttatgctattaacatagatg 95  Q
    ||||||||||||||||| ||||||||  | | ||||||||||||||||| ||||    
T  14585771 tagtcatatttgtaggcatatgtactttgccgttttatgctattaacatggatg 14585824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 42 - 95
Target Start/End: Complemental strand, 36691619 - 36691566
Alignment:
Q  42 tagtcatatttgtaggcttatgtactccgtctttttatgctattaacatagatg 95  Q
    ||||||||||||||||| || |||||  ||| ||||||| ||||||||||||||    
T  36691619 tagtcatatttgtaggcataagtactttgtcgttttatgttattaacatagatg 36691566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 67
Target Start/End: Original strand, 50460472 - 50460509
Alignment:
Q  30 aagacttgaatatagtcatatttgtaggcttatgtact 67  Q
    ||||||||||||||||||||| ||||||||| ||||||    
T  50460472 aagacttgaatatagtcatatgtgtaggcttttgtact 50460509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 38 - 95
Target Start/End: Original strand, 50520073 - 50520130
Alignment:
Q  38 aatatagtcatatttgtaggcttatgtactccgtctttttatgctattaacatagatg 95  Q
    ||||||||||||| ||||||| | ||||||  ||| ||||||||||||||||| ||||    
T  50520073 aatatagtcatatgtgtaggcatttgtactttgtcgttttatgctattaacatggatg 50520130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 42 - 95
Target Start/End: Complemental strand, 53155250 - 53155197
Alignment:
Q  42 tagtcatatttgtaggcttatgtactccgtctttttatgctattaacatagatg 95  Q
    ||||||||||||||||| ||||||||  | ||||||| ||||||||||| ||||    
T  53155250 tagtcatatttgtaggcatatgtactttgcctttttacgctattaacatggatg 53155197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 95
Target Start/End: Original strand, 53962400 - 53962465
Alignment:
Q  30 aagacttgaatatagtcatatttgtaggcttatgtactccgtctttttatgctattaacatagatg 95  Q
    ||||||||||||||||||||||||||||| ||  ||||| ||  |||||| || ||||||| ||||    
T  53962400 aagacttgaatatagtcatatttgtaggcatagatactctgttgttttatactgttaacatggatg 53962465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 42 - 95
Target Start/End: Complemental strand, 54706552 - 54706499
Alignment:
Q  42 tagtcatatttgtaggcttatgtactccgtctttttatgctattaacatagatg 95  Q
    ||||||||||||||||| ||||||||  | | ||||||||||||||||| ||||    
T  54706552 tagtcatatttgtaggcatatgtactttgccgttttatgctattaacatggatg 54706499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 90
Target Start/End: Original strand, 2598344 - 2598420
Alignment:
Q  14 agacatgagttttatgaagacttgaatatagtcatatttgtaggcttatgtactccgtctttttatgctattaacat 90  Q
    |||||||||| ||  | ||||| |||||||||||||| ||||||| | ||||||  ||| | |||||||||||||||    
T  2598344 agacatgagtatttcggagactagaatatagtcatatgtgtaggcatttgtactttgtcgtgttatgctattaacat 2598420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 47 - 95
Target Start/End: Original strand, 3457236 - 3457284
Alignment:
Q  47 atatttgtaggcttatgtactccgtctttttatgctattaacatagatg 95  Q
    |||||||||||| ||||||||  ||| ||||||||||||||||| ||||    
T  3457236 atatttgtaggcatatgtactttgtcgttttatgctattaacatggatg 3457284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 30 - 90
Target Start/End: Complemental strand, 21084570 - 21084510
Alignment:
Q  30 aagacttgaatatagtcatatttgtaggcttatgtactccgtctttttatgctattaacat 90  Q
    ||||| ||||||||||||||| || ||||||| ||| |  ||| |||||||||||||||||    
T  21084570 aagacctgaatatagtcatatatgcaggcttaagtattttgtcgttttatgctattaacat 21084510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 65
Target Start/End: Original strand, 25084289 - 25084341
Alignment:
Q  13 gagacatgagttttatgaagacttgaatatagtcatatttgtaggcttatgta 65  Q
    ||||||||| | || || ||||||||||||| |||||||||||||| ||||||    
T  25084289 gagacatgaatattctggagacttgaatataatcatatttgtaggcatatgta 25084341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 31 - 95
Target Start/End: Original strand, 31550211 - 31550275
Alignment:
Q  31 agacttgaatatagtcatatttgtaggcttatgtactccgtctttttatgctattaacatagatg 95  Q
    ||||||||||||||| ||||||| |||| ||||||    ||| ||||||||||||||||| ||||    
T  31550211 agacttgaatatagttatatttgcaggcatatgtatgatgtcgttttatgctattaacatggatg 31550275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 42 - 98
Target Start/End: Original strand, 35175017 - 35175073
Alignment:
Q  42 tagtcatatttgtaggcttatgtactccgtctttttatgctattaacatagatgatg 98  Q
    ||||||||| ||||||| || |||||  ||| ||||||||||||||||| |||||||    
T  35175017 tagtcatatgtgtaggcataagtactttgtcgttttatgctattaacatggatgatg 35175073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 38 - 98
Target Start/End: Original strand, 48401141 - 48401201
Alignment:
Q  38 aatatagtcatatttgtaggcttatgtactccgtctttttatgctattaacatagatgatg 98  Q
    ||||||||||||||||||||| ||||||||  |   || |||||||||||||| |||||||    
T  48401141 aatatagtcatatttgtaggcatatgtactttgctgttatatgctattaacatggatgatg 48401201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 38 - 98
Target Start/End: Original strand, 48401397 - 48401457
Alignment:
Q  38 aatatagtcatatttgtaggcttatgtactccgtctttttatgctattaacatagatgatg 98  Q
    ||||||||||||||||||||| ||||||||  |   || |||||||||||||| |||||||    
T  48401397 aatatagtcatatttgtaggcatatgtactttgctgttatatgctattaacatggatgatg 48401457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 25)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 16 - 97
Target Start/End: Complemental strand, 6219957 - 6219876
Alignment:
Q  16 acatgagttttatgaagacttgaatatagtcatatttgtaggcttatgtactccgtctttttatgctattaacatagatgat 97  Q
    |||||||| || || | ||||||||||||||||||||||||   ||||||||| |||  |||||||||||||||||||||||    
T  6219957 acatgagtattttgtatacttgaatatagtcatatttgtagatatatgtactctgtcactttatgctattaacatagatgat 6219876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 13 - 98
Target Start/End: Original strand, 10148216 - 10148301
Alignment:
Q  13 gagacatgagttttatgaagacttgaatatagtcatatttgtaggcttatgtactccgtctttttatgctattaacatagatgatg 98  Q
    ||||||||||| ||  | |||||| ||||||||||||||||||||| || |||||  ||| ||||||||||||||||| |||||||    
T  10148216 gagacatgagtatttcggagacttaaatatagtcatatttgtaggcataagtactttgtcgttttatgctattaacatggatgatg 10148301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 11 - 95
Target Start/End: Original strand, 3028279 - 3028363
Alignment:
Q  11 cagagacatgagttttatgaagacttgaatatagtcatatttgtaggcttatgtactccgtctttttatgctattaacatagatg 95  Q
    ||||||||||||| || || |||||||||||||||||||| ||||| ||| ||||||  ||| ||||||| ||||||||| ||||    
T  3028279 cagagacatgagtattctggagacttgaatatagtcatatgtgtagacttttgtactttgtcattttatgttattaacatggatg 3028363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 31 - 90
Target Start/End: Original strand, 5989896 - 5989955
Alignment:
Q  31 agacttgaatatagtcatatttgtaggcttatgtactccgtctttttatgctattaacat 90  Q
    |||||||||||||||||||| ||||||||| ||||||  ||| |||||||||||||||||    
T  5989896 agacttgaatatagtcatatgtgtaggcttttgtactttgtcgttttatgctattaacat 5989955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 38 - 90
Target Start/End: Complemental strand, 27534236 - 27534184
Alignment:
Q  38 aatatagtcatatttgtaggcttatgtactccgtctttttatgctattaacat 90  Q
    ||||||||||||||||||||||||||||||  | | |||||||||||||||||    
T  27534236 aatatagtcatatttgtaggcttatgtactttgccgttttatgctattaacat 27534184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 31 - 87
Target Start/End: Original strand, 37720123 - 37720179
Alignment:
Q  31 agacttgaatatagtcatatttgtaggcttatgtactccgtctttttatgctattaa 87  Q
    |||||||||||||||||||| ||||||||| ||||||  ||| ||||||||||||||    
T  37720123 agacttgaatatagtcatatgtgtaggcttttgtactttgtcgttttatgctattaa 37720179  T

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Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 31 - 98
Target Start/End: Original strand, 16809146 - 16809213
Alignment:
Q  31 agacttgaatatagtcatatttgtaggcttatgtactccgtctttttatgctattaacatagatgatg 98  Q
    |||||||||||||||||||| ||||||||| ||||||  ||  ||||||| |||||||| ||||||||    
T  16809146 agacttgaatatagtcatatgtgtaggcttctgtactttgttgttttatgttattaacaaagatgatg 16809213  T

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Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 87
Target Start/End: Complemental strand, 32778821 - 32778747
Alignment:
Q  13 gagacatgagttttatgaagacttgaatatagtcatatttgtaggcttatgtactccgtctttttatgctattaa 87  Q
    ||||||||||| || || |||||||||||||||||||||||||| | || |||||  | | ||||||||||||||    
T  32778821 gagacatgagtattctggagacttgaatatagtcatatttgtagccataggtactttgccgttttatgctattaa 32778747  T

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Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 14 - 95
Target Start/End: Complemental strand, 5917597 - 5917516
Alignment:
Q  14 agacatgagttttatgaagacttgaatatagtcatatttgtaggcttatgtactccgtctttttatgctattaacatagatg 95  Q
    ||||||| || || || ||||||||||||| |||||| ||||||||  ||||||  ||| ||||||||||||||||| ||||    
T  5917597 agacatgggtattttggagacttgaatatattcatatgtgtaggctattgtactttgtcattttatgctattaacatggatg 5917516  T

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Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 38 - 87
Target Start/End: Complemental strand, 18190675 - 18190626
Alignment:
Q  38 aatatagtcatatttgtaggcttatgtactccgtctttttatgctattaa 87  Q
    ||||||||||||||||||||||| ||||||  ||| ||||||||||||||    
T  18190675 aatatagtcatatttgtaggcttgtgtactttgtcgttttatgctattaa 18190626  T

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Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 38 - 95
Target Start/End: Original strand, 32062084 - 32062141
Alignment:
Q  38 aatatagtcatatttgtaggcttatgtactccgtctttttatgctattaacatagatg 95  Q
    |||||||||||||||||| ||||||| |||  ||| ||||||||||||||||| ||||    
T  32062084 aatatagtcatatttgtatgcttatgcactttgtcgttttatgctattaacatggatg 32062141  T

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Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 38 - 95
Target Start/End: Original strand, 32920934 - 32920991
Alignment:
Q  38 aatatagtcatatttgtaggcttatgtactccgtctttttatgctattaacatagatg 95  Q
    ||||||||||| ||||||||||||||||||  ||| |||| |||||||||||| ||||    
T  32920934 aatatagtcatgtttgtaggcttatgtactatgtcgttttgtgctattaacatggatg 32920991  T

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Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 31 - 95
Target Start/End: Complemental strand, 12244047 - 12243983
Alignment:
Q  31 agacttgaatatagtcatatttgtaggcttatgtactccgtctttttatgctattaacatagatg 95  Q
    ||||||||||||||| |||| ||||||||| ||||||  ||| ||||||| ||||||||| ||||    
T  12244047 agacttgaatatagttatatgtgtaggcttttgtactttgtcgttttatgttattaacatggatg 12243983  T

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Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 31 - 95
Target Start/End: Original strand, 12357078 - 12357142
Alignment:
Q  31 agacttgaatatagtcatatttgtaggcttatgtactccgtctttttatgctattaacatagatg 95  Q
    |||||| |||||||||||||||||||| |||||||||| | |  ||||| |||||||||| ||||    
T  12357078 agactttaatatagtcatatttgtaggtttatgtactctgccaatttattctattaacatggatg 12357142  T

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Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 95
Target Start/End: Complemental strand, 31147678 - 31147594
Alignment:
Q  11 cagagacatgagttttatgaagacttgaatatagtcatatttgtaggcttatgtactccgtctttttatgctattaacatagatg 95  Q
    ||||||||||||| ||  | |||||||||||||  ||||| ||||||||| | ||||  ||| ||||||||||||||||| ||||    
T  31147678 cagagacatgagtatttcggagacttgaatataaccatatatgtaggcttttatactttgtcattttatgctattaacatggatg 31147594  T

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Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 31 - 98
Target Start/End: Complemental strand, 16937170 - 16937103
Alignment:
Q  31 agacttgaatatagtcatatttgtaggcttatgtactccgtctttttatgctattaacatagatgatg 98  Q
    |||||| ||||||||||||| |||||||||  |||||  ||  ||||||||||||||||| |||||||    
T  16937170 agacttaaatatagtcatatgtgtaggctttagtactttgttgttttatgctattaacatggatgatg 16937103  T

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Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 42 - 95
Target Start/End: Original strand, 5526111 - 5526164
Alignment:
Q  42 tagtcatatttgtaggcttatgtactccgtctttttatgctattaacatagatg 95  Q
    ||||||||||||||| | |||||||   ||| ||||||||||||||||||||||    
T  5526111 tagtcatatttgtagacatatgtaccttgtcgttttatgctattaacatagatg 5526164  T

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Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 38 - 95
Target Start/End: Complemental strand, 10338655 - 10338598
Alignment:
Q  38 aatatagtcatatttgtaggcttatgtactccgtctttttatgctattaacatagatg 95  Q
    ||||||||||||||||||||| || |||||  | | ||||||||||||||||| ||||    
T  10338655 aatatagtcatatttgtaggcataggtactttgccgttttatgctattaacatggatg 10338598  T

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Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 38 - 95
Target Start/End: Complemental strand, 14530740 - 14530683
Alignment:
Q  38 aatatagtcatatttgtaggcttatgtactccgtctttttatgctattaacatagatg 95  Q
    ||||||||||||||| ||||||| ||||||  | | ||||||||||||||||| ||||    
T  14530740 aatatagtcatatttataggcttgtgtactttgccgttttatgctattaacatggatg 14530683  T

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Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 90
Target Start/End: Original strand, 20993092 - 20993149
Alignment:
Q  33 acttgaatatagtcatatttgtaggcttatgtactccgtctttttatgctattaacat 90  Q
    ||||||||||| ||||||||||| || ||||||||| ||  |||||| ||||||||||    
T  20993092 acttgaatataatcatatttgtatgcatatgtactctgttattttatactattaacat 20993149  T

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Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 42 - 95
Target Start/End: Complemental strand, 24790988 - 24790935
Alignment:
Q  42 tagtcatatttgtaggcttatgtactccgtctttttatgctattaacatagatg 95  Q
    ||||||||||||||||| ||||||||  | | ||||||||||||||||| ||||    
T  24790988 tagtcatatttgtaggcatatgtactttgccattttatgctattaacatggatg 24790935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 42 - 95
Target Start/End: Complemental strand, 39067510 - 39067457
Alignment:
Q  42 tagtcatatttgtaggcttatgtactccgtctttttatgctattaacatagatg 95  Q
    ||||||||||||||||| ||||||||  | | ||||||||||||||||| ||||    
T  39067510 tagtcatatttgtaggcatatgtactttgccgttttatgctattaacatggatg 39067457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 30 - 90
Target Start/End: Complemental strand, 18196978 - 18196918
Alignment:
Q  30 aagacttgaatatagtcatatttgtaggcttatgtactccgtctttttatgctattaacat 90  Q
    ||||||| ||||||||||||||||||| ||| ||||||  | | |||||||| ||||||||    
T  18196978 aagactttaatatagtcatatttgtagtcttctgtactttgccgttttatgcgattaacat 18196918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 42 - 90
Target Start/End: Complemental strand, 37128308 - 37128260
Alignment:
Q  42 tagtcatatttgtaggcttatgtactccgtctttttatgctattaacat 90  Q
    ||||||||||||||||| ||||||||  | | |||||||||||||||||    
T  37128308 tagtcatatttgtaggcatatgtactttgccgttttatgctattaacat 37128260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 42 - 98
Target Start/End: Original strand, 37612945 - 37613001
Alignment:
Q  42 tagtcatatttgtaggcttatgtactccgtctttttatgctattaacatagatgatg 98  Q
    ||||||||||||||||| || |||||  | | ||||||||||||||||| |||||||    
T  37612945 tagtcatatttgtaggcataggtactttgccattttatgctattaacatggatgatg 37613001  T

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Target: scaffold0112 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 38 - 95
Target Start/End: Complemental strand, 25336 - 25279
Alignment:
Q  38 aatatagtcatatttgtaggcttatgtactccgtctttttatgctattaacatagatg 95  Q
    ||||||||||||||||||||| ||||||||  | | ||||||||||||||||| ||||    
T  25336 aatatagtcatatttgtaggcctatgtactttgccattttatgctattaacatggatg 25279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0542 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0542
Description:

Target: scaffold0542; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 29 - 85
Target Start/End: Original strand, 4063 - 4119
Alignment:
Q  29 gaagacttgaatatagtcatatttgtaggcttatgtactccgtctttttatgctatt 85  Q
    |||||||||||||||||||||||||||||| | |||||||  || ||||||| ||||    
T  4063 gaagacttgaatatagtcatatttgtaggcatgtgtactctatcgttttatgttatt 4119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0999 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0999
Description:

Target: scaffold0999; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 31 - 98
Target Start/End: Original strand, 1987 - 2054
Alignment:
Q  31 agacttgaatatagtcatatttgtaggcttatgtactccgtctttttatgctattaacatagatgatg 98  Q
    |||| ||| ||||||| ||||||||||| ||||||||  ||| |||||||||||| |||| |||||||    
T  1987 agacatgattatagtcgtatttgtaggcatatgtactttgtcgttttatgctattgacatggatgatg 2054  T

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Target: scaffold0002 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 17 - 68
Target Start/End: Complemental strand, 404592 - 404541
Alignment:
Q  17 catgagttttatgaagacttgaatatagtcatatttgtaggcttatgtactc 68  Q
    ||||||| || |||||||||||||||| ||||||||||| || |||||||||    
T  404592 catgagtattttgaagacttgaatataatcatatttgtaagcatatgtactc 404541  T

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Target: scaffold0312 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0312
Description:

Target: scaffold0312; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 42 - 95
Target Start/End: Original strand, 6445 - 6498
Alignment:
Q  42 tagtcatatttgtaggcttatgtactccgtctttttatgctattaacatagatg 95  Q
    ||||||||||||||||| || |||||  ||| ||||||||||||||||| ||||    
T  6445 tagtcatatttgtaggcataggtactttgtcgttttatgctattaacatggatg 6498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 38 - 87
Target Start/End: Original strand, 105330 - 105379
Alignment:
Q  38 aatatagtcatatttgtaggcttatgtactccgtctttttatgctattaa 87  Q
    ||||||||||||||||||||||||| ||||  ||  ||||||||||||||    
T  105330 aatatagtcatatttgtaggcttatatactttgttgttttatgctattaa 105379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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