View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3175_low_32 (Length: 272)

Name: NF3175_low_32
Description: NF3175
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3175_low_32
NF3175_low_32
[»] chr1 (8 HSPs)
chr1 (140-251)||(5127002-5127110)
chr1 (1-32)||(13834918-13834949)
chr1 (1-30)||(10579497-10579526)
chr1 (1-30)||(14499459-14499488)
chr1 (1-30)||(17738461-17738490)
chr1 (1-30)||(17750360-17750389)
chr1 (1-30)||(48225227-48225256)
chr1 (1-30)||(52051437-52051466)
[»] scaffold0180 (1 HSPs)
scaffold0180 (1-32)||(18544-18575)
[»] chr8 (16 HSPs)
chr8 (1-32)||(5821874-5821905)
chr8 (1-32)||(5876604-5876635)
chr8 (1-32)||(45467636-45467667)
chr8 (1-30)||(6513374-6513403)
chr8 (1-30)||(9237547-9237576)
chr8 (1-30)||(10397866-10397895)
chr8 (1-30)||(10398521-10398550)
chr8 (1-30)||(11901317-11901346)
chr8 (1-30)||(12850166-12850195)
chr8 (1-30)||(14054991-14055020)
chr8 (1-30)||(21524479-21524508)
chr8 (1-30)||(23152480-23152509)
chr8 (1-30)||(35103422-35103451)
chr8 (1-30)||(35181922-35181951)
chr8 (1-30)||(41387347-41387376)
chr8 (4-32)||(3317859-3317887)
[»] chr7 (6 HSPs)
chr7 (1-32)||(22151681-22151712)
chr7 (1-32)||(22207545-22207576)
chr7 (1-30)||(8735946-8735975)
chr7 (1-30)||(11687209-11687238)
chr7 (1-30)||(39383983-39384012)
chr7 (1-29)||(23351182-23351210)
[»] chr6 (12 HSPs)
chr6 (1-32)||(6888923-6888954)
chr6 (1-32)||(8286518-8286549)
chr6 (1-32)||(18700572-18700603)
chr6 (1-32)||(19048482-19048513)
chr6 (1-32)||(29048520-29048551)
chr6 (1-31)||(10286331-10286361)
chr6 (1-30)||(1292756-1292785)
chr6 (1-30)||(5645693-5645722)
chr6 (1-30)||(7829315-7829344)
chr6 (1-30)||(7873845-7873874)
chr6 (1-30)||(8939093-8939122)
chr6 (1-30)||(32224047-32224076)
[»] chr5 (17 HSPs)
chr5 (1-32)||(1156171-1156202)
chr5 (1-32)||(4349694-4349725)
chr5 (1-32)||(10570210-10570241)
chr5 (1-32)||(37812438-37812469)
chr5 (1-31)||(10503838-10503868)
chr5 (1-30)||(6132071-6132100)
chr5 (1-30)||(6172163-6172192)
chr5 (1-30)||(7278063-7278092)
chr5 (1-30)||(9438444-9438473)
chr5 (1-30)||(13476839-13476868)
chr5 (1-30)||(14858397-14858426)
chr5 (1-30)||(17094410-17094439)
chr5 (1-30)||(22803412-22803441)
chr5 (1-30)||(24100093-24100122)
chr5 (1-30)||(42381405-42381434)
chr5 (1-30)||(42381995-42382024)
chr5 (1-29)||(42026487-42026515)
[»] chr3 (11 HSPs)
chr3 (1-32)||(51891120-51891151)
chr3 (1-32)||(53204668-53204699)
chr3 (1-31)||(23090473-23090503)
chr3 (1-30)||(1070035-1070064)
chr3 (1-30)||(2800767-2800796)
chr3 (1-30)||(6950971-6951000)
chr3 (1-30)||(12061831-12061860)
chr3 (1-30)||(25629669-25629698)
chr3 (1-30)||(28004469-28004498)
chr3 (1-30)||(28033246-28033275)
chr3 (1-30)||(38771440-38771469)
[»] chr2 (13 HSPs)
chr2 (1-32)||(7032012-7032043)
chr2 (1-32)||(15129881-15129912)
chr2 (1-32)||(18904837-18904868)
chr2 (1-32)||(45001260-45001291)
chr2 (1-30)||(6645728-6645757)
chr2 (1-30)||(23461269-23461298)
chr2 (1-30)||(26892671-26892700)
chr2 (1-30)||(26898110-26898139)
chr2 (1-30)||(28957967-28957996)
chr2 (1-30)||(30785937-30785966)
chr2 (1-30)||(35251703-35251732)
chr2 (1-29)||(27516366-27516394)
chr2 (1-29)||(36099531-36099559)
[»] chr4 (8 HSPs)
chr4 (1-31)||(25764569-25764599)
chr4 (1-30)||(11822801-11822830)
chr4 (1-30)||(19630970-19630999)
chr4 (1-30)||(23330017-23330046)
chr4 (1-30)||(26107797-26107826)
chr4 (1-30)||(36611189-36611218)
chr4 (1-30)||(52766356-52766385)
chr4 (1-30)||(55013885-55013914)
[»] scaffold0295 (1 HSPs)
scaffold0295 (1-30)||(8041-8070)
[»] scaffold0120 (1 HSPs)
scaffold0120 (1-30)||(27876-27905)
[»] scaffold0026 (1 HSPs)
scaffold0026 (1-30)||(99802-99831)
[»] scaffold0012 (1 HSPs)
scaffold0012 (1-30)||(144921-144950)


Alignment Details
Target: chr1 (Bit Score: 73; Significance: 2e-33; HSPs: 8)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 140 - 251
Target Start/End: Original strand, 5127002 - 5127110
Alignment:
Q  140 tttcatttcgggttacaatgagaaccccatggtctctttagagtgtgatagctaatacctaatttgcttggnnnnnnnttagtaagtggtatagtaatga 239  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||   ||||||    
T  5127002 tttcatttcgggttacaatgagaacaccatggtctctttagagtgtgatagctaatacctaatttgcttggaaaaaaattagtaagtggta---taatga 5127098  T
Q  240 acatgccaacaa 251  Q
    ||||||||||||    
T  5127099 acatgccaacaa 5127110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 13834918 - 13834949
Alignment:
Q  1 tatgttaggatgaatgtattagagttaaggac 32  Q
    ||||||||||||||||||||||||||||||||    
T  13834918 tatgttaggatgaatgtattagagttaaggac 13834949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 10579526 - 10579497
Alignment:
Q  1 tatgttaggatgaatgtattagagttaagg 30  Q
    ||||||||||||||||||||||||||||||    
T  10579526 tatgttaggatgaatgtattagagttaagg 10579497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 14499488 - 14499459
Alignment:
Q  1 tatgttaggatgaatgtattagagttaagg 30  Q
    ||||||||||||||||||||||||||||||    
T  14499488 tatgttaggatgaatgtattagagttaagg 14499459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 17738461 - 17738490
Alignment:
Q  1 tatgttaggatgaatgtattagagttaagg 30  Q
    ||||||||||||||||||||||||||||||    
T  17738461 tatgttaggatgaatgtattagagttaagg 17738490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 17750389 - 17750360
Alignment:
Q  1 tatgttaggatgaatgtattagagttaagg 30  Q
    ||||||||||||||||||||||||||||||    
T  17750389 tatgttaggatgaatgtattagagttaagg 17750360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 48225227 - 48225256
Alignment:
Q  1 tatgttaggatgaatgtattagagttaagg 30  Q
    ||||||||||||||||||||||||||||||    
T  48225227 tatgttaggatgaatgtattagagttaagg 48225256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 52051437 - 52051466
Alignment:
Q  1 tatgttaggatgaatgtattagagttaagg 30  Q
    ||||||||||||||||||||||||||||||    
T  52051437 tatgttaggatgaatgtattagagttaagg 52051466  T

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Target: scaffold0180 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 18544 - 18575
Alignment:
Q  1 tatgttaggatgaatgtattagagttaaggac 32  Q
    ||||||||||||||||||||||||||||||||    
T  18544 tatgttaggatgaatgtattagagttaaggac 18575  T

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Target: chr8 (Bit Score: 32; Significance: 0.000000006; HSPs: 16)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 5821905 - 5821874
Alignment:
Q  1 tatgttaggatgaatgtattagagttaaggac 32  Q
    ||||||||||||||||||||||||||||||||    
T  5821905 tatgttaggatgaatgtattagagttaaggac 5821874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 5876635 - 5876604
Alignment:
Q  1 tatgttaggatgaatgtattagagttaaggac 32  Q
    ||||||||||||||||||||||||||||||||    
T  5876635 tatgttaggatgaatgtattagagttaaggac 5876604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 45467636 - 45467667
Alignment:
Q  1 tatgttaggatgaatgtattagagttaaggac 32  Q
    ||||||||||||||||||||||||||||||||    
T  45467636 tatgttaggatgaatgtattagagttaaggac 45467667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 6513374 - 6513403
Alignment:
Q  1 tatgttaggatgaatgtattagagttaagg 30  Q
    ||||||||||||||||||||||||||||||    
T  6513374 tatgttaggatgaatgtattagagttaagg 6513403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 9237576 - 9237547
Alignment:
Q  1 tatgttaggatgaatgtattagagttaagg 30  Q
    ||||||||||||||||||||||||||||||    
T  9237576 tatgttaggatgaatgtattagagttaagg 9237547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 10397866 - 10397895
Alignment:
Q  1 tatgttaggatgaatgtattagagttaagg 30  Q
    ||||||||||||||||||||||||||||||    
T  10397866 tatgttaggatgaatgtattagagttaagg 10397895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 10398550 - 10398521
Alignment:
Q  1 tatgttaggatgaatgtattagagttaagg 30  Q
    ||||||||||||||||||||||||||||||    
T  10398550 tatgttaggatgaatgtattagagttaagg 10398521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 11901346 - 11901317
Alignment:
Q  1 tatgttaggatgaatgtattagagttaagg 30  Q
    ||||||||||||||||||||||||||||||    
T  11901346 tatgttaggatgaatgtattagagttaagg 11901317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 12850195 - 12850166
Alignment:
Q  1 tatgttaggatgaatgtattagagttaagg 30  Q
    ||||||||||||||||||||||||||||||    
T  12850195 tatgttaggatgaatgtattagagttaagg 12850166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 14055020 - 14054991
Alignment:
Q  1 tatgttaggatgaatgtattagagttaagg 30  Q
    ||||||||||||||||||||||||||||||    
T  14055020 tatgttaggatgaatgtattagagttaagg 14054991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 21524508 - 21524479
Alignment:
Q  1 tatgttaggatgaatgtattagagttaagg 30  Q
    ||||||||||||||||||||||||||||||    
T  21524508 tatgttaggatgaatgtattagagttaagg 21524479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 23152480 - 23152509
Alignment:
Q  1 tatgttaggatgaatgtattagagttaagg 30  Q
    ||||||||||||||||||||||||||||||    
T  23152480 tatgttaggatgaatgtattagagttaagg 23152509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 35103451 - 35103422
Alignment:
Q  1 tatgttaggatgaatgtattagagttaagg 30  Q
    ||||||||||||||||||||||||||||||    
T  35103451 tatgttaggatgaatgtattagagttaagg 35103422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 35181951 - 35181922
Alignment:
Q  1 tatgttaggatgaatgtattagagttaagg 30  Q
    ||||||||||||||||||||||||||||||    
T  35181951 tatgttaggatgaatgtattagagttaagg 35181922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 41387347 - 41387376
Alignment:
Q  1 tatgttaggatgaatgtattagagttaagg 30  Q
    ||||||||||||||||||||||||||||||    
T  41387347 tatgttaggatgaatgtattagagttaagg 41387376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 32
Target Start/End: Complemental strand, 3317887 - 3317859
Alignment:
Q  4 gttaggatgaatgtattagagttaaggac 32  Q
    |||||||||||||||||||||||||||||    
T  3317887 gttaggatgaatgtattagagttaaggac 3317859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 32; Significance: 0.000000006; HSPs: 6)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 22151712 - 22151681
Alignment:
Q  1 tatgttaggatgaatgtattagagttaaggac 32  Q
    ||||||||||||||||||||||||||||||||    
T  22151712 tatgttaggatgaatgtattagagttaaggac 22151681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 22207576 - 22207545
Alignment:
Q  1 tatgttaggatgaatgtattagagttaaggac 32  Q
    ||||||||||||||||||||||||||||||||    
T  22207576 tatgttaggatgaatgtattagagttaaggac 22207545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 8735975 - 8735946
Alignment:
Q  1 tatgttaggatgaatgtattagagttaagg 30  Q
    ||||||||||||||||||||||||||||||    
T  8735975 tatgttaggatgaatgtattagagttaagg 8735946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 11687238 - 11687209
Alignment:
Q  1 tatgttaggatgaatgtattagagttaagg 30  Q
    ||||||||||||||||||||||||||||||    
T  11687238 tatgttaggatgaatgtattagagttaagg 11687209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 39383983 - 39384012
Alignment:
Q  1 tatgttaggatgaatgtattagagttaagg 30  Q
    ||||||||||||||||||||||||||||||    
T  39383983 tatgttaggatgaatgtattagagttaagg 39384012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 29
Target Start/End: Original strand, 23351182 - 23351210
Alignment:
Q  1 tatgttaggatgaatgtattagagttaag 29  Q
    |||||||||||||||||||||||||||||    
T  23351182 tatgttaggatgaatgtattagagttaag 23351210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 32; Significance: 0.000000006; HSPs: 12)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 6888954 - 6888923
Alignment:
Q  1 tatgttaggatgaatgtattagagttaaggac 32  Q
    ||||||||||||||||||||||||||||||||    
T  6888954 tatgttaggatgaatgtattagagttaaggac 6888923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 8286518 - 8286549
Alignment:
Q  1 tatgttaggatgaatgtattagagttaaggac 32  Q
    ||||||||||||||||||||||||||||||||    
T  8286518 tatgttaggatgaatgtattagagttaaggac 8286549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 18700603 - 18700572
Alignment:
Q  1 tatgttaggatgaatgtattagagttaaggac 32  Q
    ||||||||||||||||||||||||||||||||    
T  18700603 tatgttaggatgaatgtattagagttaaggac 18700572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 19048482 - 19048513
Alignment:
Q  1 tatgttaggatgaatgtattagagttaaggac 32  Q
    ||||||||||||||||||||||||||||||||    
T  19048482 tatgttaggatgaatgtattagagttaaggac 19048513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 29048520 - 29048551
Alignment:
Q  1 tatgttaggatgaatgtattagagttaaggac 32  Q
    ||||||||||||||||||||||||||||||||    
T  29048520 tatgttaggatgaatgtattagagttaaggac 29048551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 10286361 - 10286331
Alignment:
Q  1 tatgttaggatgaatgtattagagttaagga 31  Q
    |||||||||||||||||||||||||||||||    
T  10286361 tatgttaggatgaatgtattagagttaagga 10286331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 1292785 - 1292756
Alignment:
Q  1 tatgttaggatgaatgtattagagttaagg 30  Q
    ||||||||||||||||||||||||||||||    
T  1292785 tatgttaggatgaatgtattagagttaagg 1292756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 5645693 - 5645722
Alignment:
Q  1 tatgttaggatgaatgtattagagttaagg 30  Q
    ||||||||||||||||||||||||||||||    
T  5645693 tatgttaggatgaatgtattagagttaagg 5645722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 7829344 - 7829315
Alignment:
Q  1 tatgttaggatgaatgtattagagttaagg 30  Q
    ||||||||||||||||||||||||||||||    
T  7829344 tatgttaggatgaatgtattagagttaagg 7829315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 7873874 - 7873845
Alignment:
Q  1 tatgttaggatgaatgtattagagttaagg 30  Q
    ||||||||||||||||||||||||||||||    
T  7873874 tatgttaggatgaatgtattagagttaagg 7873845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 8939093 - 8939122
Alignment:
Q  1 tatgttaggatgaatgtattagagttaagg 30  Q
    ||||||||||||||||||||||||||||||    
T  8939093 tatgttaggatgaatgtattagagttaagg 8939122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 32224076 - 32224047
Alignment:
Q  1 tatgttaggatgaatgtattagagttaagg 30  Q
    ||||||||||||||||||||||||||||||    
T  32224076 tatgttaggatgaatgtattagagttaagg 32224047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 32; Significance: 0.000000006; HSPs: 17)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 1156171 - 1156202
Alignment:
Q  1 tatgttaggatgaatgtattagagttaaggac 32  Q
    ||||||||||||||||||||||||||||||||    
T  1156171 tatgttaggatgaatgtattagagttaaggac 1156202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 4349725 - 4349694
Alignment:
Q  1 tatgttaggatgaatgtattagagttaaggac 32  Q
    ||||||||||||||||||||||||||||||||    
T  4349725 tatgttaggatgaatgtattagagttaaggac 4349694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 10570210 - 10570241
Alignment:
Q  1 tatgttaggatgaatgtattagagttaaggac 32  Q
    ||||||||||||||||||||||||||||||||    
T  10570210 tatgttaggatgaatgtattagagttaaggac 10570241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 37812438 - 37812469
Alignment:
Q  1 tatgttaggatgaatgtattagagttaaggac 32  Q
    ||||||||||||||||||||||||||||||||    
T  37812438 tatgttaggatgaatgtattagagttaaggac 37812469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 10503838 - 10503868
Alignment:
Q  1 tatgttaggatgaatgtattagagttaagga 31  Q
    |||||||||||||||||||||||||||||||    
T  10503838 tatgttaggatgaatgtattagagttaagga 10503868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 6132071 - 6132100
Alignment:
Q  1 tatgttaggatgaatgtattagagttaagg 30  Q
    ||||||||||||||||||||||||||||||    
T  6132071 tatgttaggatgaatgtattagagttaagg 6132100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 6172192 - 6172163
Alignment:
Q  1 tatgttaggatgaatgtattagagttaagg 30  Q
    ||||||||||||||||||||||||||||||    
T  6172192 tatgttaggatgaatgtattagagttaagg 6172163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 7278063 - 7278092
Alignment:
Q  1 tatgttaggatgaatgtattagagttaagg 30  Q
    ||||||||||||||||||||||||||||||    
T  7278063 tatgttaggatgaatgtattagagttaagg 7278092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 9438444 - 9438473
Alignment:
Q  1 tatgttaggatgaatgtattagagttaagg 30  Q
    ||||||||||||||||||||||||||||||    
T  9438444 tatgttaggatgaatgtattagagttaagg 9438473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 13476839 - 13476868
Alignment:
Q  1 tatgttaggatgaatgtattagagttaagg 30  Q
    ||||||||||||||||||||||||||||||    
T  13476839 tatgttaggatgaatgtattagagttaagg 13476868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 14858426 - 14858397
Alignment:
Q  1 tatgttaggatgaatgtattagagttaagg 30  Q
    ||||||||||||||||||||||||||||||    
T  14858426 tatgttaggatgaatgtattagagttaagg 14858397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 17094410 - 17094439
Alignment:
Q  1 tatgttaggatgaatgtattagagttaagg 30  Q
    ||||||||||||||||||||||||||||||    
T  17094410 tatgttaggatgaatgtattagagttaagg 17094439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 22803441 - 22803412
Alignment:
Q  1 tatgttaggatgaatgtattagagttaagg 30  Q
    ||||||||||||||||||||||||||||||    
T  22803441 tatgttaggatgaatgtattagagttaagg 22803412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 24100093 - 24100122
Alignment:
Q  1 tatgttaggatgaatgtattagagttaagg 30  Q
    ||||||||||||||||||||||||||||||    
T  24100093 tatgttaggatgaatgtattagagttaagg 24100122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 42381434 - 42381405
Alignment:
Q  1 tatgttaggatgaatgtattagagttaagg 30  Q
    ||||||||||||||||||||||||||||||    
T  42381434 tatgttaggatgaatgtattagagttaagg 42381405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 42382024 - 42381995
Alignment:
Q  1 tatgttaggatgaatgtattagagttaagg 30  Q
    ||||||||||||||||||||||||||||||    
T  42382024 tatgttaggatgaatgtattagagttaagg 42381995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 29
Target Start/End: Complemental strand, 42026515 - 42026487
Alignment:
Q  1 tatgttaggatgaatgtattagagttaag 29  Q
    |||||||||||||||||||||||||||||    
T  42026515 tatgttaggatgaatgtattagagttaag 42026487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 32; Significance: 0.000000006; HSPs: 11)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 51891151 - 51891120
Alignment:
Q  1 tatgttaggatgaatgtattagagttaaggac 32  Q
    ||||||||||||||||||||||||||||||||    
T  51891151 tatgttaggatgaatgtattagagttaaggac 51891120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 53204668 - 53204699
Alignment:
Q  1 tatgttaggatgaatgtattagagttaaggac 32  Q
    ||||||||||||||||||||||||||||||||    
T  53204668 tatgttaggatgaatgtattagagttaaggac 53204699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 23090473 - 23090503
Alignment:
Q  1 tatgttaggatgaatgtattagagttaagga 31  Q
    |||||||||||||||||||||||||||||||    
T  23090473 tatgttaggatgaatgtattagagttaagga 23090503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 1070064 - 1070035
Alignment:
Q  1 tatgttaggatgaatgtattagagttaagg 30  Q
    ||||||||||||||||||||||||||||||    
T  1070064 tatgttaggatgaatgtattagagttaagg 1070035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 2800767 - 2800796
Alignment:
Q  1 tatgttaggatgaatgtattagagttaagg 30  Q
    ||||||||||||||||||||||||||||||    
T  2800767 tatgttaggatgaatgtattagagttaagg 2800796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 6950971 - 6951000
Alignment:
Q  1 tatgttaggatgaatgtattagagttaagg 30  Q
    ||||||||||||||||||||||||||||||    
T  6950971 tatgttaggatgaatgtattagagttaagg 6951000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 12061831 - 12061860
Alignment:
Q  1 tatgttaggatgaatgtattagagttaagg 30  Q
    ||||||||||||||||||||||||||||||    
T  12061831 tatgttaggatgaatgtattagagttaagg 12061860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 25629669 - 25629698
Alignment:
Q  1 tatgttaggatgaatgtattagagttaagg 30  Q
    ||||||||||||||||||||||||||||||    
T  25629669 tatgttaggatgaatgtattagagttaagg 25629698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 28004498 - 28004469
Alignment:
Q  1 tatgttaggatgaatgtattagagttaagg 30  Q
    ||||||||||||||||||||||||||||||    
T  28004498 tatgttaggatgaatgtattagagttaagg 28004469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 28033275 - 28033246
Alignment:
Q  1 tatgttaggatgaatgtattagagttaagg 30  Q
    ||||||||||||||||||||||||||||||    
T  28033275 tatgttaggatgaatgtattagagttaagg 28033246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 38771469 - 38771440
Alignment:
Q  1 tatgttaggatgaatgtattagagttaagg 30  Q
    ||||||||||||||||||||||||||||||    
T  38771469 tatgttaggatgaatgtattagagttaagg 38771440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 32; Significance: 0.000000006; HSPs: 13)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 7032012 - 7032043
Alignment:
Q  1 tatgttaggatgaatgtattagagttaaggac 32  Q
    ||||||||||||||||||||||||||||||||    
T  7032012 tatgttaggatgaatgtattagagttaaggac 7032043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 15129881 - 15129912
Alignment:
Q  1 tatgttaggatgaatgtattagagttaaggac 32  Q
    ||||||||||||||||||||||||||||||||    
T  15129881 tatgttaggatgaatgtattagagttaaggac 15129912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 18904837 - 18904868
Alignment:
Q  1 tatgttaggatgaatgtattagagttaaggac 32  Q
    ||||||||||||||||||||||||||||||||    
T  18904837 tatgttaggatgaatgtattagagttaaggac 18904868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 45001260 - 45001291
Alignment:
Q  1 tatgttaggatgaatgtattagagttaaggac 32  Q
    ||||||||||||||||||||||||||||||||    
T  45001260 tatgttaggatgaatgtattagagttaaggac 45001291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 6645728 - 6645757
Alignment:
Q  1 tatgttaggatgaatgtattagagttaagg 30  Q
    ||||||||||||||||||||||||||||||    
T  6645728 tatgttaggatgaatgtattagagttaagg 6645757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 23461298 - 23461269
Alignment:
Q  1 tatgttaggatgaatgtattagagttaagg 30  Q
    ||||||||||||||||||||||||||||||    
T  23461298 tatgttaggatgaatgtattagagttaagg 23461269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 26892671 - 26892700
Alignment:
Q  1 tatgttaggatgaatgtattagagttaagg 30  Q
    ||||||||||||||||||||||||||||||    
T  26892671 tatgttaggatgaatgtattagagttaagg 26892700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 26898110 - 26898139
Alignment:
Q  1 tatgttaggatgaatgtattagagttaagg 30  Q
    ||||||||||||||||||||||||||||||    
T  26898110 tatgttaggatgaatgtattagagttaagg 26898139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 28957996 - 28957967
Alignment:
Q  1 tatgttaggatgaatgtattagagttaagg 30  Q
    ||||||||||||||||||||||||||||||    
T  28957996 tatgttaggatgaatgtattagagttaagg 28957967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 30785966 - 30785937
Alignment:
Q  1 tatgttaggatgaatgtattagagttaagg 30  Q
    ||||||||||||||||||||||||||||||    
T  30785966 tatgttaggatgaatgtattagagttaagg 30785937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 35251703 - 35251732
Alignment:
Q  1 tatgttaggatgaatgtattagagttaagg 30  Q
    ||||||||||||||||||||||||||||||    
T  35251703 tatgttaggatgaatgtattagagttaagg 35251732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 29
Target Start/End: Original strand, 27516366 - 27516394
Alignment:
Q  1 tatgttaggatgaatgtattagagttaag 29  Q
    |||||||||||||||||||||||||||||    
T  27516366 tatgttaggatgaatgtattagagttaag 27516394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 29
Target Start/End: Original strand, 36099531 - 36099559
Alignment:
Q  1 tatgttaggatgaatgtattagagttaag 29  Q
    |||||||||||||||||||||||||||||    
T  36099531 tatgttaggatgaatgtattagagttaag 36099559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 31; Significance: 0.00000002; HSPs: 8)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 25764569 - 25764599
Alignment:
Q  1 tatgttaggatgaatgtattagagttaagga 31  Q
    |||||||||||||||||||||||||||||||    
T  25764569 tatgttaggatgaatgtattagagttaagga 25764599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 11822801 - 11822830
Alignment:
Q  1 tatgttaggatgaatgtattagagttaagg 30  Q
    ||||||||||||||||||||||||||||||    
T  11822801 tatgttaggatgaatgtattagagttaagg 11822830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 19630970 - 19630999
Alignment:
Q  1 tatgttaggatgaatgtattagagttaagg 30  Q
    ||||||||||||||||||||||||||||||    
T  19630970 tatgttaggatgaatgtattagagttaagg 19630999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 23330017 - 23330046
Alignment:
Q  1 tatgttaggatgaatgtattagagttaagg 30  Q
    ||||||||||||||||||||||||||||||    
T  23330017 tatgttaggatgaatgtattagagttaagg 23330046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 26107797 - 26107826
Alignment:
Q  1 tatgttaggatgaatgtattagagttaagg 30  Q
    ||||||||||||||||||||||||||||||    
T  26107797 tatgttaggatgaatgtattagagttaagg 26107826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 36611189 - 36611218
Alignment:
Q  1 tatgttaggatgaatgtattagagttaagg 30  Q
    ||||||||||||||||||||||||||||||    
T  36611189 tatgttaggatgaatgtattagagttaagg 36611218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 52766385 - 52766356
Alignment:
Q  1 tatgttaggatgaatgtattagagttaagg 30  Q
    ||||||||||||||||||||||||||||||    
T  52766385 tatgttaggatgaatgtattagagttaagg 52766356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 55013914 - 55013885
Alignment:
Q  1 tatgttaggatgaatgtattagagttaagg 30  Q
    ||||||||||||||||||||||||||||||    
T  55013914 tatgttaggatgaatgtattagagttaagg 55013885  T

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Target: scaffold0295 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0295
Description:

Target: scaffold0295; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 8041 - 8070
Alignment:
Q  1 tatgttaggatgaatgtattagagttaagg 30  Q
    ||||||||||||||||||||||||||||||    
T  8041 tatgttaggatgaatgtattagagttaagg 8070  T

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Target: scaffold0120 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 27876 - 27905
Alignment:
Q  1 tatgttaggatgaatgtattagagttaagg 30  Q
    ||||||||||||||||||||||||||||||    
T  27876 tatgttaggatgaatgtattagagttaagg 27905  T

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Target: scaffold0026 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 99831 - 99802
Alignment:
Q  1 tatgttaggatgaatgtattagagttaagg 30  Q
    ||||||||||||||||||||||||||||||    
T  99831 tatgttaggatgaatgtattagagttaagg 99802  T

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Target: scaffold0012 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 144950 - 144921
Alignment:
Q  1 tatgttaggatgaatgtattagagttaagg 30  Q
    ||||||||||||||||||||||||||||||    
T  144950 tatgttaggatgaatgtattagagttaagg 144921  T

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