View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3176_high_31 (Length: 271)
Name: NF3176_high_31
Description: NF3176
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3176_high_31 |
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Alignment Details
Target: chr5 (Bit Score: 140; Significance: 2e-73; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 112 - 255
Target Start/End: Complemental strand, 1952767 - 1952624
Alignment:
| Q |
112 |
gtacaaccaattttcatatgaactctacaccgccataaaaattgttaatttttcaactctgcgatttttatttagaggaatttcaactctacgattgtgt |
211 |
Q |
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| T |
1952767 |
gtacaaccaattttcatatgaactctacaccgccataaaaattgttaatttttcaactctgcgatttttatttagaggaatttcaactctacgattgtgt |
1952668 |
T |
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| Q |
212 |
aaagggtttgaaatttacttgtgtttatagtggttgaaataaac |
255 |
Q |
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| T |
1952667 |
aaagggtttgaaaattacttgtgtttatagtggttgaaataaac |
1952624 |
T |
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