View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3183_high_7 (Length: 267)
Name: NF3183_high_7
Description: NF3183
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3183_high_7 |
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Alignment Details
Target: chr2 (Bit Score: 210; Significance: 1e-115; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 16 - 252
Target Start/End: Original strand, 1702435 - 1702672
Alignment:
| Q |
16 |
caatgttatcacccacccactcaaaagttgtatctctcaagacacgtcacctttcatgagtcactctttcaatttt-attgaatctttatgcctcgtcca |
114 |
Q |
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| T |
1702435 |
caatgttatcacccacccactcaaaagttgtatctctcaagacacgtcacctttcatgagtcactctttccatttttattgaatctttatgcctcgtcca |
1702534 |
T |
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| Q |
115 |
cgtcttctattttaaattcaaactcaaacactaacaagcactttccttctcatcatcctcttattattcaacaccttagccatcctattattccttcacc |
214 |
Q |
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||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||| |
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| T |
1702535 |
cgtcttctattttaaattcaaactcaaacactagcaaacactttccttctcatcatcctcttattattcaacaccttaaccatcctattattcctccacc |
1702634 |
T |
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| Q |
215 |
ttctcctcaaaattcaaactcatcacttatccctacac |
252 |
Q |
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|||||||||||||||||||||||||||||||||||||| |
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| T |
1702635 |
ttctcctcaaaattcaaactcatcacttatccctacac |
1702672 |
T |
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