View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3184_high_12 (Length: 507)
Name: NF3184_high_12
Description: NF3184
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3184_high_12 |
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Alignment Details
Target: chr8 (Bit Score: 445; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 445; E-Value: 0
Query Start/End: Original strand, 20 - 493
Target Start/End: Complemental strand, 36093107 - 36092632
Alignment:
| Q |
20 |
cagaaggtgggaactttagataaggacgtgtatggctgtatgcaattatagataggtcgtgagcaccatcatatgatgatataataattaattaattggt |
119 |
Q |
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| T |
36093107 |
cagaaggtgggaactttagataaggacgtgtatggctgtatgcaattatagataggtcgtgagcaccatcatatgatgatataataattaattaattggt |
36093008 |
T |
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| Q |
120 |
ttgagattctagtttggtgtttgtttgaaaaccaagtgtatagtttggttgcataatgaactacatttatatata--ggaattatttggtggtattgacg |
217 |
Q |
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|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
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| T |
36093007 |
ttgagactctagtttggtgtttgtttgaaaaccaagtgtatagtttggttgcataatgaactacatttatatatataggaattatttggtggtattgacg |
36092908 |
T |
|
| Q |
218 |
taacggaacaacacaacctcaagtgtggcctaaccctagttggttggttttatttcaatttaggttgttggtgacaacatattcaacagaagcatgtgta |
317 |
Q |
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||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36092907 |
taacggaacaacacaacctcaagtgtggcctgcccctagttggttggttttatttcaatttaggttgttggtgacaacatattcaacagaagcatgtgta |
36092808 |
T |
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| Q |
318 |
aatgtggactatacgggattaatcatttctggtacaccatatttgtcaacttatttatcatatgcaaattatattttgtttttgataagtaatcatatgc |
417 |
Q |
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||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36092807 |
aatgtggactatacgggattaatcatttctggtacacaatatttgtcaacttatttatcatatgcaaattatattttgtttttgataagtaatcatatgc |
36092708 |
T |
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| Q |
418 |
aaacaattaggaattctatacagatgacaataactttgctaaacagtaattcatgatctgaacctacatcacaggt |
493 |
Q |
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|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36092707 |
aaacaattaggaattctatacagatgacaatagctttgctaaacagtaattcatgatctgaacctacatcacaggt |
36092632 |
T |
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