View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3184_high_54 (Length: 265)
Name: NF3184_high_54
Description: NF3184
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3184_high_54 |
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Alignment Details
Target: chr2 (Bit Score: 222; Significance: 1e-122; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 10 - 247
Target Start/End: Complemental strand, 24563778 - 24563541
Alignment:
| Q |
10 |
caatgagagtgtgtccagtaagactgatcaacggtgttagcaccaccttcccaatccaacgatccaaattcatttgggaactgctgatggtttagcatca |
109 |
Q |
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| T |
24563778 |
caatgagactgtgtccagtaagactgatcaacggtgttagcaccaccttcccaatccaacgatccaaattcatttgagaactgctgatggttgagcatca |
24563679 |
T |
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| Q |
110 |
ccgagtctccatgctgtaccacatgtacttgatcattggttgaacttgatgttatgaggttcctgaagctattaacttgttcattttctataacagagtt |
209 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
24563678 |
ccgagtctccatgctgtaccacatgtacttgatcattggttgaacttgatattatgaggttcctgaagctattaacttgttcattttctataacagagtt |
24563579 |
T |
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| Q |
210 |
aaccctaatggttgagccatcactgttggagtgagaat |
247 |
Q |
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|||||||||||||||||||||||||||||||||||||| |
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| T |
24563578 |
aaccctaatggttgagccatcactgttggagtgagaat |
24563541 |
T |
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