View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3184_high_57 (Length: 256)
Name: NF3184_high_57
Description: NF3184
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3184_high_57 |
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Alignment Details
Target: chr3 (Bit Score: 203; Significance: 1e-111; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 8 - 242
Target Start/End: Original strand, 39401178 - 39401412
Alignment:
| Q |
8 |
gacatcatcagtgattgagggtggacacgatgaggctatacatgagccttcggatttgatcgcagcaaatatgaatcctacggttggaaatctttcactt |
107 |
Q |
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| T |
39401178 |
gacatcttcagtgattgagggtggacacgatgaggctatacatgagccttcggatttgatcgtagcaaatatgaatcctacggttggaaatctttcactt |
39401277 |
T |
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| Q |
108 |
cctaatgaaacattcttaaaagctgcaatctctctcaaggatgaggtatgtgttgatgaattttagttcattttgtttcatttcttgtttacttagtagc |
207 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
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| T |
39401278 |
cctaatgaaacattcttaaaagctgcaatctctctcaaggatgaggtatgtgttgatgaattttagttcattttgtttcatttcttgtttactttgtagc |
39401377 |
T |
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| Q |
208 |
acgaaggcatgtatggtgtgggacacaacataagt |
242 |
Q |
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| T |
39401378 |
accaaggcgtgtaaggtgtcgaacacaacataagt |
39401412 |
T |
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