View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3184_low_41 (Length: 323)
Name: NF3184_low_41
Description: NF3184
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3184_low_41 |
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Alignment Details
Target: chr7 (Bit Score: 258; Significance: 1e-143; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 258; E-Value: 1e-143
Query Start/End: Original strand, 17 - 301
Target Start/End: Complemental strand, 22047272 - 22046987
Alignment:
| Q |
17 |
tgaaaactgctcaaagggtttaaacaaa-cacacagaaactttattatattacactctaaaatagtgtttggatttaaaccaaacactagagttcacata |
115 |
Q |
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|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
22047272 |
tgaaaactgctcaaagggtttaaacaaaacacacagaaactttattatattacactctaaaatagtgtttggatttaaaccaaacactagagttcacata |
22047173 |
T |
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| Q |
116 |
aaacatacataatcttaaactagttattatcattaagttattatcatcactaaggggtaagacccatctctgcttcaaactcttcatttgcaagtgcatg |
215 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
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| T |
22047172 |
aaacatacataatcttaaactagttattatcattaagttattatcatcactaaggggtaagacccatttctgcttcaaactcttcatttgcaagtgcatg |
22047073 |
T |
|
| Q |
216 |
ggttgcagttgcagtttggaccacatttgcagccatcattctcagcacccatttcagcagcaccctcaaattggggtttggcagat |
301 |
Q |
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||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||| || ||||||||| |
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| T |
22047072 |
ggttgcagttgcagtttggaccacacttgcagccatcattctcagcacccatttcagcagcaccttcaaattgaggcttggcagat |
22046987 |
T |
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