View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3184_low_6 (Length: 596)
Name: NF3184_low_6
Description: NF3184
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3184_low_6 |
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Alignment Details
Target: chr7 (Bit Score: 494; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 494; E-Value: 0
Query Start/End: Original strand, 37 - 591
Target Start/End: Complemental strand, 32995981 - 32995432
Alignment:
| Q |
37 |
taaaacaagcaactaaaatcttannnnnnnaaaccttcttttaagaggaaaagagtattcatgattgctttattccttggtagttcccaaaagttatttt |
136 |
Q |
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|||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32995981 |
taaaacaagcaactaaaatcctatttttttaaaccttcttttaagaggaaaagagtattcatgattgctttattccttggtagttcccaaaagttatttt |
32995882 |
T |
|
| Q |
137 |
ctcaaactttatttacatttgtgcactagctactttttcaacccatgaaagaataaacaaaaaataccaagatcgatcaacggtgtataagtagtagtaa |
236 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
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| T |
32995881 |
ctcaaactttatttacatttgtgcactagctactttttcaacccatgaaagaataaacaaaaaataccaagatcgagcaacggtgtataagtagtagtaa |
32995782 |
T |
|
| Q |
237 |
gatggaagaagctataaagaagtcgtcacaatcataaaagtgcggttaatttccccgcaagcatgaaacctcaatgatagctttgctttaaatggaaatg |
336 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32995781 |
gatggaagaagctataaagaagtcgtcacaatcataaaagtgcggttaattcccccgcaagcatgaaacctcaatgatagctttgctttaaatggaaatg |
32995682 |
T |
|
| Q |
337 |
aatatgcaaactttcatacatttattcgtttaatcattacatatttaggtacaaaaattcctaaatttacatcacatgaatatggcaaaaacctttcttc |
436 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
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| T |
32995681 |
aatatgcaaactttcatacatttattcgtttaatcattacatatttaggtacaaaaactcctaaatttacatcacatgaatatggcaaaaacctttcttc |
32995582 |
T |
|
| Q |
437 |
tcttccaataaccgattccctccccctagcccttatcccattcccctgcctgctcaaccgtgcttgctattcaccccatcatttacctatatagtctttc |
536 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
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| T |
32995581 |
tcttccaataaccgattccctccccctagcccttatcccattcccctgcctgctcaaccgtgcttgctattcaccccatcatttacct-----gtctttc |
32995487 |
T |
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| Q |
537 |
tagactttgttgcttctaaatccatctctcttatcccttatttgttcatctcact |
591 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
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| T |
32995486 |
tagactttgttgcttctaaatccatctctcttatcccttatttgttcttctcact |
32995432 |
T |
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