View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3184_low_62 (Length: 252)

Name: NF3184_low_62
Description: NF3184
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3184_low_62
NF3184_low_62
[»] chr2 (40 HSPs)
chr2 (18-144)||(2294706-2294832)
chr2 (141-252)||(40613895-40614006)
chr2 (145-252)||(38273135-38273242)
chr2 (145-252)||(36168836-36168943)
chr2 (18-110)||(2322125-2322217)
chr2 (145-252)||(17473020-17473127)
chr2 (145-250)||(7465730-7465835)
chr2 (150-250)||(28863460-28863560)
chr2 (145-252)||(9058480-9058587)
chr2 (145-252)||(42257193-42257300)
chr2 (143-252)||(13438341-13438450)
chr2 (145-249)||(33436096-33436200)
chr2 (145-249)||(33436211-33436315)
chr2 (145-252)||(10249375-10249482)
chr2 (44-110)||(2304461-2304527)
chr2 (144-252)||(40701477-40701585)
chr2 (145-252)||(5574481-5574588)
chr2 (145-252)||(30915463-30915570)
chr2 (145-252)||(32505641-32505748)
chr2 (150-252)||(19930813-19930915)
chr2 (143-252)||(28381648-28381757)
chr2 (145-249)||(20700815-20700919)
chr2 (143-249)||(27864702-27864808)
chr2 (145-250)||(2533124-2533228)
chr2 (150-249)||(41575142-41575242)
chr2 (145-249)||(45097731-45097835)
chr2 (143-249)||(43490119-43490225)
chr2 (145-249)||(26891500-26891604)
chr2 (144-249)||(17820000-17820105)
chr2 (165-249)||(2997483-2997567)
chr2 (144-252)||(4060684-4060792)
chr2 (145-252)||(38882804-38882913)
chr2 (145-249)||(13365351-13365457)
chr2 (145-249)||(38732354-38732458)
chr2 (145-218)||(15428767-15428840)
chr2 (151-249)||(3439985-3440083)
chr2 (145-213)||(17823784-17823852)
chr2 (189-245)||(3737987-3738043)
chr2 (172-227)||(42849794-42849848)
chr2 (172-216)||(16096870-16096913)
[»] chr1 (35 HSPs)
chr1 (145-252)||(32813247-32813354)
chr1 (143-252)||(26440732-26440841)
chr1 (143-252)||(27564728-27564837)
chr1 (144-252)||(9474869-9474977)
chr1 (145-252)||(2581915-2582022)
chr1 (145-252)||(3000319-3000426)
chr1 (145-252)||(8346381-8346488)
chr1 (145-252)||(38632314-38632421)
chr1 (150-252)||(44548369-44548471)
chr1 (143-252)||(47452313-47452422)
chr1 (144-252)||(48716275-48716383)
chr1 (145-245)||(51898683-51898783)
chr1 (145-252)||(38595154-38595261)
chr1 (143-252)||(37649196-37649305)
chr1 (144-249)||(50590996-50591101)
chr1 (145-252)||(23597084-23597191)
chr1 (145-252)||(37926431-37926538)
chr1 (145-252)||(41758805-41758912)
chr1 (145-252)||(50630458-50630565)
chr1 (144-249)||(41608489-41608594)
chr1 (145-252)||(43132-43239)
chr1 (145-252)||(49811520-49811627)
chr1 (145-252)||(45044553-45044660)
chr1 (145-249)||(5958996-5959100)
chr1 (143-245)||(6260868-6260970)
chr1 (175-252)||(13414791-13414868)
chr1 (150-252)||(26274437-26274539)
chr1 (150-245)||(11152378-11152472)
chr1 (143-249)||(47748441-47748546)
chr1 (146-249)||(44453980-44454083)
chr1 (145-227)||(7740733-7740815)
chr1 (172-252)||(48489328-48489407)
chr1 (172-227)||(7447936-7447990)
chr1 (172-216)||(4401450-4401493)
chr1 (172-216)||(50448195-50448238)
[»] chr3 (39 HSPs)
chr3 (143-252)||(26141525-26141634)
chr3 (145-252)||(51419353-51419460)
chr3 (143-252)||(53982009-53982118)
chr3 (144-252)||(20764908-20765016)
chr3 (145-252)||(11347915-11348022)
chr3 (145-252)||(47531865-47531972)
chr3 (144-252)||(33644199-33644307)
chr3 (145-252)||(41189757-41189864)
chr3 (149-252)||(52629304-52629407)
chr3 (145-249)||(24699950-24700054)
chr3 (145-252)||(17470405-17470512)
chr3 (145-252)||(49607414-49607521)
chr3 (145-252)||(54868888-54868995)
chr3 (150-252)||(31456694-31456796)
chr3 (145-249)||(8076393-8076497)
chr3 (145-248)||(27714888-27714991)
chr3 (145-252)||(11095348-11095453)
chr3 (145-249)||(33118847-33118951)
chr3 (145-249)||(35536626-35536730)
chr3 (150-252)||(48587084-48587186)
chr3 (148-249)||(26754698-26754799)
chr3 (145-249)||(8956762-8956866)
chr3 (145-249)||(14623835-14623939)
chr3 (145-252)||(11907371-11907478)
chr3 (150-249)||(13898051-13898150)
chr3 (144-249)||(45058549-45058653)
chr3 (145-252)||(9562999-9563106)
chr3 (150-249)||(30801729-30801828)
chr3 (167-249)||(36331325-36331407)
chr3 (145-249)||(41080709-41080811)
chr3 (145-249)||(48375702-48375806)
chr3 (145-252)||(36707421-36707524)
chr3 (145-204)||(36331419-36331478)
chr3 (173-234)||(40480853-40480913)
chr3 (149-249)||(25395329-25395429)
chr3 (145-249)||(35965778-35965874)
chr3 (172-227)||(53581793-53581847)
chr3 (148-249)||(42823114-42823215)
chr3 (172-228)||(52629938-52629993)
[»] chr5 (31 HSPs)
chr5 (143-252)||(28177773-28177882)
chr5 (144-252)||(26720515-26720623)
chr5 (144-252)||(26990264-26990372)
chr5 (143-252)||(40145405-40145514)
chr5 (145-252)||(2740274-2740381)
chr5 (150-250)||(18520879-18520979)
chr5 (143-252)||(33149631-33149740)
chr5 (145-252)||(6679698-6679805)
chr5 (145-252)||(15409603-15409710)
chr5 (145-252)||(36732935-36733042)
chr5 (145-249)||(2252164-2252268)
chr5 (143-252)||(42414295-42414404)
chr5 (145-249)||(3921261-3921365)
chr5 (152-248)||(13811659-13811755)
chr5 (144-252)||(35785198-35785306)
chr5 (143-250)||(14831812-14831919)
chr5 (145-245)||(20073516-20073616)
chr5 (145-249)||(35943888-35943992)
chr5 (145-245)||(31008988-31009088)
chr5 (145-250)||(33825319-33825424)
chr5 (150-250)||(36875607-36875698)
chr5 (144-249)||(6259997-6260102)
chr5 (145-246)||(38296203-38296304)
chr5 (149-204)||(10356638-10356694)
chr5 (145-249)||(39688893-39688997)
chr5 (145-249)||(9603813-9603917)
chr5 (189-249)||(21370048-21370108)
chr5 (150-249)||(16327906-16328005)
chr5 (193-252)||(31132392-31132451)
chr5 (153-236)||(41470425-41470508)
chr5 (176-250)||(39557512-39557586)
[»] chr6 (22 HSPs)
chr6 (145-252)||(31976248-31976355)
chr6 (143-252)||(32869676-32869785)
chr6 (150-252)||(22880651-22880753)
chr6 (143-252)||(17598552-17598661)
chr6 (145-252)||(31110754-31110859)
chr6 (145-252)||(29857827-29857934)
chr6 (144-249)||(15508020-15508125)
chr6 (145-249)||(15990038-15990142)
chr6 (145-249)||(30341356-30341460)
chr6 (145-252)||(11427616-11427725)
chr6 (144-249)||(4231547-4231652)
chr6 (145-252)||(6209458-6209565)
chr6 (144-252)||(31109393-31109501)
chr6 (150-250)||(28536483-28536581)
chr6 (149-249)||(9379708-9379808)
chr6 (141-249)||(31953026-31953134)
chr6 (176-252)||(23128120-23128196)
chr6 (145-250)||(15832577-15832682)
chr6 (152-252)||(946383-946483)
chr6 (145-249)||(12732482-12732586)
chr6 (172-225)||(26669944-26669996)
chr6 (172-216)||(7367671-7367714)
[»] chr8 (34 HSPs)
chr8 (143-252)||(43414574-43414683)
chr8 (145-252)||(4854856-4854963)
chr8 (144-250)||(15048177-15048282)
chr8 (143-252)||(15197331-15197440)
chr8 (145-252)||(12831047-12831154)
chr8 (143-252)||(504114-504223)
chr8 (147-252)||(10621080-10621185)
chr8 (143-252)||(34012289-34012398)
chr8 (152-252)||(14547929-14548029)
chr8 (143-252)||(23122590-23122699)
chr8 (145-249)||(10284627-10284731)
chr8 (145-245)||(37038479-37038579)
chr8 (144-252)||(40423936-40424044)
chr8 (150-249)||(5957835-5957934)
chr8 (145-252)||(44507080-44507187)
chr8 (145-249)||(16383377-16383481)
chr8 (145-252)||(1179933-1180040)
chr8 (143-249)||(20074938-20075036)
chr8 (165-249)||(8841428-8841512)
chr8 (145-249)||(15258925-15259029)
chr8 (145-249)||(16056397-16056501)
chr8 (145-249)||(24307789-24307893)
chr8 (145-249)||(34307216-34307320)
chr8 (145-249)||(30479470-30479574)
chr8 (145-249)||(32032725-32032828)
chr8 (145-249)||(17443825-17443929)
chr8 (189-252)||(9122229-9122292)
chr8 (145-218)||(24307629-24307702)
chr8 (172-234)||(29705466-29705527)
chr8 (143-249)||(38229427-38229532)
chr8 (145-249)||(42221515-42221619)
chr8 (145-227)||(14055610-14055692)
chr8 (172-216)||(2547118-2547161)
chr8 (172-216)||(42197370-42197413)
[»] chr4 (39 HSPs)
chr4 (145-249)||(50052424-50052528)
chr4 (144-252)||(11511455-11511563)
chr4 (144-252)||(31910191-31910299)
chr4 (145-252)||(48183042-48183149)
chr4 (144-252)||(6034043-6034151)
chr4 (145-249)||(55475191-55475295)
chr4 (145-252)||(480440-480547)
chr4 (145-252)||(29234238-29234345)
chr4 (145-252)||(41236347-41236454)
chr4 (145-252)||(42044360-42044467)
chr4 (143-252)||(40574777-40574886)
chr4 (145-252)||(24995100-24995207)
chr4 (144-245)||(50526171-50526272)
chr4 (144-252)||(54473526-54473634)
chr4 (143-249)||(3481652-3481758)
chr4 (145-249)||(19670712-19670816)
chr4 (145-249)||(29239886-29239990)
chr4 (145-249)||(32766958-32767062)
chr4 (145-250)||(23608235-23608340)
chr4 (145-249)||(47986208-47986312)
chr4 (183-252)||(41823920-41823989)
chr4 (145-249)||(8343159-8343263)
chr4 (165-249)||(17983739-17983823)
chr4 (145-249)||(29547955-29548059)
chr4 (145-249)||(29977885-29977989)
chr4 (145-249)||(48647722-48647826)
chr4 (149-252)||(53352559-53352661)
chr4 (145-249)||(50813888-50813992)
chr4 (145-249)||(55079709-55079814)
chr4 (145-215)||(47104544-47104614)
chr4 (145-246)||(28480267-28480368)
chr4 (145-246)||(28481142-28481243)
chr4 (145-246)||(28482017-28482118)
chr4 (153-249)||(29589736-29589831)
chr4 (149-215)||(18769113-18769179)
chr4 (143-249)||(18924491-18924597)
chr4 (144-249)||(29535376-29535480)
chr4 (171-234)||(33703245-33703307)
chr4 (145-249)||(44536742-44536845)
[»] chr7 (39 HSPs)
chr7 (141-252)||(19329838-19329949)
chr7 (146-252)||(35522877-35522983)
chr7 (145-239)||(46374808-46374902)
chr7 (145-252)||(3434562-3434669)
chr7 (145-252)||(7389389-7389496)
chr7 (144-252)||(38267039-38267147)
chr7 (145-252)||(8080376-8080483)
chr7 (145-252)||(36361906-36362013)
chr7 (145-252)||(38837217-38837324)
chr7 (145-250)||(4999509-4999614)
chr7 (143-248)||(21234399-21234504)
chr7 (143-252)||(35137531-35137640)
chr7 (145-252)||(19436180-19436287)
chr7 (143-252)||(31735882-31735984)
chr7 (145-252)||(36362026-36362133)
chr7 (150-252)||(3784000-3784102)
chr7 (150-252)||(32951486-32951588)
chr7 (145-252)||(26296644-26296751)
chr7 (145-252)||(46033794-46033901)
chr7 (145-249)||(22343361-22343465)
chr7 (145-249)||(35468851-35468955)
chr7 (145-249)||(36208173-36208277)
chr7 (145-249)||(41915741-41915845)
chr7 (145-252)||(40957707-40957814)
chr7 (150-252)||(3694372-3694474)
chr7 (144-249)||(32564422-32564527)
chr7 (145-249)||(18207180-18207283)
chr7 (145-249)||(38044197-38044301)
chr7 (143-249)||(8238210-8238317)
chr7 (144-249)||(39255920-39256024)
chr7 (144-249)||(41423681-41423786)
chr7 (145-249)||(40846109-40846213)
chr7 (145-249)||(10343559-10343663)
chr7 (145-245)||(7727906-7728006)
chr7 (179-247)||(27744307-27744375)
chr7 (150-249)||(2318239-2318338)
chr7 (172-227)||(32029752-32029806)
chr7 (175-249)||(16374820-16374894)
chr7 (145-194)||(11044188-11044237)
[»] scaffold0237 (1 HSPs)
scaffold0237 (145-252)||(4029-4136)
[»] scaffold1268 (1 HSPs)
scaffold1268 (143-249)||(925-1031)
[»] scaffold1267 (1 HSPs)
scaffold1267 (143-249)||(925-1031)
[»] scaffold0321 (1 HSPs)
scaffold0321 (145-252)||(10102-10209)
[»] scaffold0110 (1 HSPs)
scaffold0110 (144-249)||(8859-8964)
[»] scaffold0316 (1 HSPs)
scaffold0316 (143-249)||(17056-17158)
[»] scaffold0018 (1 HSPs)
scaffold0018 (172-249)||(152525-152602)
[»] scaffold0119 (1 HSPs)
scaffold0119 (172-225)||(798-850)


Alignment Details
Target: chr2 (Bit Score: 123; Significance: 3e-63; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 18 - 144
Target Start/End: Original strand, 2294706 - 2294832
Alignment:
Q  18 tgtaacttgtaattttgagtgtgcagaagtgatgcatagaatagagttatggccaaagtgaaatggtgcttcatgattttcttaataacaagagatctac 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  2294706 tgtaacttgtaattttgagtgtgcagaagtgatgcatagaatagagttatggccaaagtgaaatggtgcttcatgattttcttaataataagagatctac 2294805  T
Q  118 taaaaagtaccataactatcaacacat 144  Q
    |||||||||||||||||||||||||||    
T  2294806 taaaaagtaccataactatcaacacat 2294832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 141 - 252
Target Start/End: Complemental strand, 40614006 - 40613895
Alignment:
Q  141 acatgagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacac 240  Q
    |||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||| |||||||||||||| ||||||| ||||||||||||    
T  40614006 acatgagttatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtggccacatggaccccgcacaagcacac 40613907  T
Q  241 tttctcttttct 252  Q
    ||||||||||||    
T  40613906 tttctcttttct 40613895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 145 - 252
Target Start/End: Complemental strand, 38273242 - 38273135
Alignment:
Q  145 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttc 244  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||| ||||| ||||||| |||| |||||||||||    
T  38273242 gagttatgatacatagacattcttagatggcaatacaccctttaacacccacacaaaaatctgacacgtagccacatggaccccgcactagcacactttc 38273143  T
Q  245 tcttttct 252  Q
    ||||||||    
T  38273142 tcttttct 38273135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 145 - 252
Target Start/End: Original strand, 36168836 - 36168943
Alignment:
Q  145 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttc 244  Q
    ||||||||||||||||||||||||||||| ||||||| |||||||| ||||||||||||| |||||||||||||| ||||||| ||||||||| ||||||    
T  36168836 gagttatgatacatagacatccttagatgacaatacatcctttaactcccacacaaaaatttgacacgtggccacatggaccccgcacaagcatactttc 36168935  T
Q  245 tcttttct 252  Q
    ||||||||    
T  36168936 tcttttct 36168943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 18 - 110
Target Start/End: Original strand, 2322125 - 2322217
Alignment:
Q  18 tgtaacttgtaattttgagtgtgcagaagtgatgcatagaatagagttatggccaaagtgaaatggtgcttcatgattttcttaataacaaga 110  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||| | ||||||||| |||||||||||||||||||||||||    
T  2322125 tgtaacttgtaattttgagtgtgctgaagtgatgcatagaatagagttatggccagaatgaaatggtacttcatgattttcttaataacaaga 2322217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 145 - 252
Target Start/End: Original strand, 17473020 - 17473127
Alignment:
Q  145 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttc 244  Q
    |||| |||||||||||||| ||||||||||||||||||||||| |||||||||||||||| |||||||| | |||||||| || ||||||||||||||||    
T  17473020 gagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacactttc 17473119  T
Q  245 tcttttct 252  Q
    ||||||||    
T  17473120 tcttttct 17473127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 145 - 250
Target Start/End: Complemental strand, 7465835 - 7465730
Alignment:
Q  145 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttc 244  Q
    |||| |||||||||||||| ||||||||||||||||||||||| |||||||||||||||| |||||||| | |||||||||||  |||||||||||||||    
T  7465835 gagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccacacaagcacactttc 7465736  T
Q  245 tctttt 250  Q
    ||||||    
T  7465735 tctttt 7465730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 150 - 250
Target Start/End: Original strand, 28863460 - 28863560
Alignment:
Q  150 atgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctcttt 249  Q
    |||||||||||||| |||||| |||||||||||||||| |||||||||||||||| |||||||| | ||||||||||| |||||||||||||||||||||    
T  28863460 atgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttt 28863559  T
Q  250 t 250  Q
    |    
T  28863560 t 28863560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 145 - 252
Target Start/End: Original strand, 9058480 - 9058587
Alignment:
Q  145 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttc 244  Q
    |||| |||||||||||||| |||||| |||||||||||||||| |||||||||||||||| |||||||| | || |||||||| ||||||||||||||||    
T  9058480 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcacactttc 9058579  T
Q  245 tcttttct 252  Q
    ||||||||    
T  9058580 tcttttct 9058587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 145 - 252
Target Start/End: Original strand, 42257193 - 42257300
Alignment:
Q  145 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttc 244  Q
    ||||||||||||||||||||| |||| |||||||||| | ||| ||||||||| |||||| |||||||||||||| ||||||| ||||||||||||||||    
T  42257193 gagttatgatacatagacatctttaggtggcaatacatcatttgacacccacataaaaatctgacacgtggccacatggaccccgcacaagcacactttc 42257292  T
Q  245 tcttttct 252  Q
    ||||||||    
T  42257293 tcttttct 42257300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 143 - 252
Target Start/End: Original strand, 13438341 - 13438450
Alignment:
Q  143 atgagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactt 242  Q
    |||||| |||||||||||||| |||||| || ||||||| ||||| |||||||||||||||| |||||||| | ||||||||||| ||||||||||||||    
T  13438341 atgagtaatgatacatagacacccttaggtgacaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 13438440  T
Q  243 tctcttttct 252  Q
    ||||||||||    
T  13438441 tctcttttct 13438450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 145 - 249
Target Start/End: Complemental strand, 33436200 - 33436096
Alignment:
Q  145 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttc 244  Q
    |||| |||||||||||||| |||||| |||||||||||||||| |||||||||||||||| | |||||| | ||||||||||| ||||||||||||||||    
T  33436200 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcacactttc 33436101  T
Q  245 tcttt 249  Q
    |||||    
T  33436100 tcttt 33436096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 145 - 249
Target Start/End: Original strand, 33436211 - 33436315
Alignment:
Q  145 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttc 244  Q
    |||| |||||||||||||||||||||||||||||||||| ||| ||||||||| |||||| ||||||||| ||| ||||||  |||||||||||||||||    
T  33436211 gagtaatgatacatagacatccttagatggcaatacaccttttgacacccacataaaaatctgacacgtgaccatgtggactttgcacaagcacactttc 33436310  T
Q  245 tcttt 249  Q
    |||||    
T  33436311 tcttt 33436315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 145 - 252
Target Start/End: Complemental strand, 10249482 - 10249375
Alignment:
Q  145 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttc 244  Q
    |||| |||||||||||||| |||||| || ||||||||| ||| |||||||||||||||| |||||||| | ||||||||||| ||||||||||||||||    
T  10249482 gagtaatgatacatagacacccttaggtgacaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 10249383  T
Q  245 tcttttct 252  Q
    ||||||||    
T  10249382 tcttttct 10249375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 44 - 110
Target Start/End: Original strand, 2304461 - 2304527
Alignment:
Q  44 aagtgatgcatagaatagagttatggccaaagtgaaatggtgcttcatgattttcttaataacaaga 110  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2304461 aagtgatgcatagaatagagttatggccaaagtgaaatggtgcttcatgattttcttaataacaaga 2304527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 144 - 252
Target Start/End: Original strand, 40701477 - 40701585
Alignment:
Q  144 tgagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacacttt 243  Q
    ||||| |||||||||||||| |||||| |||||||||||| ||| |||||||||||||||| |||||||| |  |||||||||| |||||| ||||||||    
T  40701477 tgagtaatgatacatagacacccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtagttacgtggaccccgcacaatcacacttt 40701576  T
Q  244 ctcttttct 252  Q
    |||||||||    
T  40701577 ctcttttct 40701585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 145 - 252
Target Start/End: Complemental strand, 5574588 - 5574481
Alignment:
Q  145 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttc 244  Q
    |||| ||||||||||||||  ||||| |||||||||||||||| ||||||||| |||||| |||||||| | |||||||| || ||||||||||||||||    
T  5574588 gagtaatgatacatagacactcttaggtggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacactttc 5574489  T
Q  245 tcttttct 252  Q
    ||||||||    
T  5574488 tcttttct 5574481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 145 - 252
Target Start/End: Original strand, 30915463 - 30915570
Alignment:
Q  145 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttc 244  Q
    |||| |||||||||||||| |||||| |||||||||||||||| || |||||| |||||| |||||||| | ||||||||||| | ||||||||||||||    
T  30915463 gagtaatgatacatagacacccttaggtggcaatacaccctttgacccccacataaaaatctgacacgtagtcacgtggaccccgtacaagcacactttc 30915562  T
Q  245 tcttttct 252  Q
    ||||||||    
T  30915563 tcttttct 30915570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 145 - 252
Target Start/End: Complemental strand, 32505748 - 32505641
Alignment:
Q  145 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttc 244  Q
    |||| |||||||||||||| |||||| || ||||||||| ||| |||||||||||||||| |||||||| | ||||||||||| ||||||||||||||||    
T  32505748 gagtaatgatacatagacacccttaggtgacaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 32505649  T
Q  245 tcttttct 252  Q
    | ||||||    
T  32505648 tattttct 32505641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 150 - 252
Target Start/End: Complemental strand, 19930915 - 19930813
Alignment:
Q  150 atgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctcttt 249  Q
    |||||||||||||| |||||| |||||||||||||||| ||| |||||||||||| |||||||| | || |||||||| |||||| ||||||||||||||    
T  19930915 atgatacatagacacccttaggtggcaatacaccctttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaaacacactttctcttt 19930816  T
Q  250 tct 252  Q
    |||    
T  19930815 tct 19930813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 143 - 252
Target Start/End: Complemental strand, 28381757 - 28381648
Alignment:
Q  143 atgagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactt 242  Q
    |||||| |||||||||||||| |||||| |||||||||||| ||  |||||||||||||||| |||||||| | ||| ||||| | ||||||||||||||    
T  28381757 atgagtaatgatacatagacacccttaggtggcaatacacctttcgacacccacacaaaaatctgacacgtagtcacatggactccgcacaagcacactt 28381658  T
Q  243 tctcttttct 252  Q
    ||||||||||    
T  28381657 tctcttttct 28381648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 145 - 249
Target Start/End: Original strand, 20700815 - 20700919
Alignment:
Q  145 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttc 244  Q
    |||| ||||||||||||||||||||  |||||||||||||||| || || |||||||||| |||||||| | ||||||||||| ||| ||||||||||||    
T  20700815 gagtaatgatacatagacatccttatgtggcaatacaccctttgactcctacacaaaaatctgacacgtagtcacgtggaccccgcataagcacactttc 20700914  T
Q  245 tcttt 249  Q
    |||||    
T  20700915 tcttt 20700919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 143 - 249
Target Start/End: Original strand, 27864702 - 27864808
Alignment:
Q  143 atgagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactt 242  Q
    |||||| |||||||||||||| |||||  |||||||||||||||| ||| |||||||||||| ||||||||   ||||||||||| ||| ||||||||||    
T  27864702 atgagtaatgatacatagacacccttatgtggcaatacaccctttgacatccacacaaaaatctgacacgtaatcacgtggaccccgcaaaagcacactt 27864801  T
Q  243 tctcttt 249  Q
    |||||||    
T  27864802 tctcttt 27864808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 145 - 250
Target Start/End: Original strand, 2533124 - 2533228
Alignment:
Q  145 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttc 244  Q
    |||||||||||||||||||||||||  |||||||||| ||||| ||||| |||||||||| |||||||| ||||| | ||||| |||||||||||||||     
T  2533124 gagttatgatacatagacatccttaagtggcaatacatcctttgacacc-acacaaaaatctgacacgtagccacatagaccccgcacaagcacactttt 2533222  T
Q  245 tctttt 250  Q
    ||||||    
T  2533223 tctttt 2533228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 150 - 249
Target Start/End: Original strand, 41575142 - 41575242
Alignment:
Q  150 atgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtgga-ccctgcacaagcacactttctctt 248  Q
    ||||||||||||||||||||||||| |||||||||||| |||  ||||||||||| ||||| |||| || ||||| |||| |||||||||||||||||||    
T  41575142 atgatacatagacatccttagatggtaatacaccctttgacattcacacaaaaatttgacatgtggtcatgtggacccctacacaagcacactttctctt 41575241  T
Q  249 t 249  Q
    |    
T  41575242 t 41575242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 145 - 249
Target Start/End: Complemental strand, 45097835 - 45097731
Alignment:
Q  145 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttc 244  Q
    ||||||||||||||| |||||||||| |||||||||| || || ||||||| |||||||| ||||| |||||||  ||||||| ||||||| ||||||||    
T  45097835 gagttatgatacataaacatccttaggtggcaatacatcccttgacacccatacaaaaatctgacatgtggccatatggaccccgcacaagtacactttc 45097736  T
Q  245 tcttt 249  Q
    |||||    
T  45097735 tcttt 45097731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 143 - 249
Target Start/End: Original strand, 43490119 - 43490225
Alignment:
Q  143 atgagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactt 242  Q
    ||||||||||||||||| ||| |||||| || |||||||||| || |||||||||||||||| ||||| |||||||  ||||||| ||||||| ||||||    
T  43490119 atgagttatgatacataaacacccttaggtgacaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactt 43490218  T
Q  243 tctcttt 249  Q
    | |||||    
T  43490219 tatcttt 43490225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 145 - 249
Target Start/End: Complemental strand, 26891604 - 26891500
Alignment:
Q  145 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttc 244  Q
    |||||||||||||||| || |||||| ||||||||||||| |  |||||||||||||||| ||||| |||| ||||||||||  | ||||||||| ||||    
T  26891604 gagttatgatacatagccacccttaggtggcaatacacccctagacacccacacaaaaatctgacatgtggtcacgtggacctcgaacaagcacattttc 26891505  T
Q  245 tcttt 249  Q
    |||||    
T  26891504 tcttt 26891500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 144 - 249
Target Start/End: Complemental strand, 17820105 - 17820000
Alignment:
Q  144 tgagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacacttt 243  Q
    |||||||||||||||||||| |  ||| ||||||||||||| || |||||||||||||||| ||||| ||||  ||||||||||  ||||| |||| |||    
T  17820105 tgagttatgatacatagacaactataggtggcaatacaccccttgacacccacacaaaaatctgacatgtggttacgtggaccccacacaaacacatttt 17820006  T
Q  244 ctcttt 249  Q
    ||||||    
T  17820005 ctcttt 17820000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 165 - 249
Target Start/End: Complemental strand, 2997567 - 2997483
Alignment:
Q  165 ccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctcttt 249  Q
    |||||| ||||||||||||| || |||||||||||||||| ||||| |||||||  ||||||| ||||||| |||||||||||||    
T  2997567 ccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttctcttt 2997483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 144 - 252
Target Start/End: Original strand, 4060684 - 4060792
Alignment:
Q  144 tgagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacacttt 243  Q
    ||||| |||||||||||||| |||||| || ||||||||| ||| ||| |||||||||||| |||||||| |  ||||||| || ||| |||||||||||    
T  4060684 tgagtaatgatacatagacacccttaggtgacaatacaccttttgacatccacacaaaaatctgacacgtagttacgtggatcccgcataagcacacttt 4060783  T
Q  244 ctcttttct 252  Q
    || ||||||    
T  4060784 cttttttct 4060792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 145 - 252
Target Start/End: Complemental strand, 38882913 - 38882804
Alignment:
Q  145 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtgga---ccctgcacaagcacact 241  Q
    |||| |||||||||||||| |||||| |||||||| ||||||| ||| |||||||||||| |||||||| | ||||||||   ||| |||||||| ||||    
T  38882913 gagtaatgatacatagacacccttaggtggcaata-accctttgacatccacacaaaaatctgacacgtagtcacgtggacccccccgcacaagcgcact 38882815  T
Q  242 ttctcttttct 252  Q
    |||||||||||    
T  38882814 ttctcttttct 38882804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 145 - 249
Target Start/End: Original strand, 13365351 - 13365457
Alignment:
Q  145 gagttatgatacatagacat--ccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactt 242  Q
    ||||||||||||||| |||   ||||||||||||||| |||| || |||||||||||||||| ||||| ||| |||  ||||||| ||||||| ||||||    
T  13365351 gagttatgatacataaacacacccttagatggcaatataccccttgacacccacacaaaaatctgacatgtgaccatatggaccccgcacaagtacactt 13365450  T
Q  243 tctcttt 249  Q
    |||||||    
T  13365451 tctcttt 13365457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 145 - 249
Target Start/End: Original strand, 38732354 - 38732458
Alignment:
Q  145 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttc 244  Q
    ||||||||||||||| ||| |||||  || ||||||| || || |||||||||||||||| ||||| |||| ||  ||||||| ||||||| ||||||||    
T  38732354 gagttatgatacataaacacccttatgtgacaatacatcccttgacacccacacaaaaatctgacatgtggtcatatggaccccgcacaagtacactttc 38732453  T
Q  245 tcttt 249  Q
    |||||    
T  38732454 tcttt 38732458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 145 - 218
Target Start/End: Complemental strand, 15428840 - 15428767
Alignment:
Q  145 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggcca 218  Q
    ||||||||||||||| |||||||||  |||| |||||||| ||||||| ||||||||||| ||||| |||||||    
T  15428840 gagttatgatacataaacatccttatgtggccatacaccccttaacactcacacaaaaatctgacatgtggcca 15428767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 151 - 249
Target Start/End: Original strand, 3439985 - 3440083
Alignment:
Q  151 tgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctcttt 249  Q
    |||||| |||||| |||||| ||||||||||| | |  |||||||||||||||| | ||| |||   |||||||||| ||||||||||| |||||||||    
T  3439985 tgatacgtagacacccttaggtggcaatacactcctggacacccacacaaaaatctaacatgtgattacgtggaccccgcacaagcacattttctcttt 3440083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 145 - 213
Target Start/End: Original strand, 17823784 - 17823852
Alignment:
Q  145 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgt 213  Q
    |||| |||||||||| |||||||||| ||||||||||  | | ||||||||||||||||| ||||||||    
T  17823784 gagtaatgatacatatacatccttaggtggcaatacattcctgaacacccacacaaaaatctgacacgt 17823852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 189 - 245
Target Start/End: Original strand, 3737987 - 3738043
Alignment:
Q  189 acacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttct 245  Q
    |||||||||||||||| ||||| |||| || |||||||| ||||||||||| |||||    
T  3737987 acacccacacaaaaatctgacatgtggtcatgtggaccccgcacaagcacattttct 3738043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 227
Target Start/End: Original strand, 42849794 - 42849848
Alignment:
Q  172 tggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccc 227  Q
    ||||||||||||||||| ||||||||||||| | ||||||||||| || |||||||    
T  42849794 tggcaatacacccttta-cacccacacaaaattctgacacgtggcaacttggaccc 42849848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 216
Target Start/End: Complemental strand, 16096913 - 16096870
Alignment:
Q  172 tggcaatacaccctttaacacccacacaaaaatatgacacgtggc 216  Q
    ||||||||||||||||| ||||||||||||| | |||||||||||    
T  16096913 tggcaatacacccttta-cacccacacaaaattctgacacgtggc 16096870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 88; Significance: 2e-42; HSPs: 35)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 145 - 252
Target Start/End: Original strand, 32813247 - 32813354
Alignment:
Q  145 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttc 244  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||| ||| ||||||| ||||||||||||||||    
T  32813247 gagttatgatacatagacatccttaggtggcaatacaccctttaacacccacacaaaaatctgacacgtggtcacatggaccccgcacaagcacactttc 32813346  T
Q  245 tcttttct 252  Q
    ||||||||    
T  32813347 tcttttct 32813354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 143 - 252
Target Start/End: Original strand, 26440732 - 26440841
Alignment:
Q  143 atgagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactt 242  Q
    |||||||| |||| ||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||| |||| || ||| ||||||||||    
T  26440732 atgagttaggatagatagacatccttagatgacaatacaccctttaacacccacacaaaaatctgacacgtggccacatggatcccgcataagcacactt 26440831  T
Q  243 tctcttttct 252  Q
    ||||||||||    
T  26440832 tctcttttct 26440841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 143 - 252
Target Start/End: Complemental strand, 27564837 - 27564728
Alignment:
Q  143 atgagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactt 242  Q
    |||||| ||||||||||||||||||||| |||||||||||| ||| |||||||||||||||| ||||||||   ||||||||||| ||||||||||||||    
T  27564837 atgagtaatgatacatagacatccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcacactt 27564738  T
Q  243 tctcttttct 252  Q
    ||||||||||    
T  27564737 tctcttttct 27564728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 144 - 252
Target Start/End: Complemental strand, 9474977 - 9474869
Alignment:
Q  144 tgagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacacttt 243  Q
    ||||| |||||||||||||| |||||| |||||||||||||||| |||||||||||||||| |||||||| | ||||||||||| |||||| ||||||||    
T  9474977 tgagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaaacacacttt 9474878  T
Q  244 ctcttttct 252  Q
    |||||||||    
T  9474877 ctcttttct 9474869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 145 - 252
Target Start/End: Original strand, 2581915 - 2582022
Alignment:
Q  145 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttc 244  Q
    |||| |||||||||||||| |||||| |||||||||||||||| |||||||||||||||| |||||||| | ||||||||||| ||||||||||||||||    
T  2581915 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 2582014  T
Q  245 tcttttct 252  Q
    | ||||||    
T  2582015 ttttttct 2582022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 145 - 252
Target Start/End: Original strand, 3000319 - 3000426
Alignment:
Q  145 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttc 244  Q
    |||| |||||||||| ||| |||||| |||||||||||||||| |||||||||||||||| |||||||| | ||||||||||| | ||||||||||||||    
T  3000319 gagtaatgatacataaacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcacactttc 3000418  T
Q  245 tcttttct 252  Q
    ||||||||    
T  3000419 tcttttct 3000426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 145 - 252
Target Start/End: Complemental strand, 8346488 - 8346381
Alignment:
Q  145 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttc 244  Q
    |||| ||||||||||| || | |||| |||||||||||| ||| |||||||||||||||| |||||||| | ||||||||||||||||||||||||||||    
T  8346488 gagtaatgatacatagtcacctttaggtggcaatacaccatttgacacccacacaaaaatctgacacgtagtcacgtggaccctgcacaagcacactttc 8346389  T
Q  245 tcttttct 252  Q
    ||||||||    
T  8346388 tcttttct 8346381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 145 - 252
Target Start/End: Complemental strand, 38632421 - 38632314
Alignment:
Q  145 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttc 244  Q
    |||| |||||||||||||| |||||| |||||||||||| ||||||| |||||||||||| |||||||| | ||||||||||| |||||||||||||||     
T  38632421 gagtaatgatacatagacacccttaggtggcaatacaccttttaacatccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttt 38632322  T
Q  245 tcttttct 252  Q
    ||||||||    
T  38632321 tcttttct 38632314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 150 - 252
Target Start/End: Complemental strand, 44548471 - 44548369
Alignment:
Q  150 atgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctcttt 249  Q
    |||||||||||||||| |||| |||||||||||| ||| | |||||||||||||| |||||||| | ||||||||||| |||||||||||||||||||||    
T  44548471 atgatacatagacatctttaggtggcaatacaccatttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttt 44548372  T
Q  250 tct 252  Q
    |||    
T  44548371 tct 44548369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 143 - 252
Target Start/End: Complemental strand, 47452422 - 47452313
Alignment:
Q  143 atgagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactt 242  Q
    |||||| |||||||||||||| |||||| ||| |||||||||||| |||||||||||||||| | |||||| | |||||||| || ||||||||||||||    
T  47452422 atgagtaatgatacatagacacccttaggtggtaatacaccctttgacacccacacaaaaatctaacacgtagtcacgtggatcccgcacaagcacactt 47452323  T
Q  243 tctcttttct 252  Q
    ||||||||||    
T  47452322 tctcttttct 47452313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 144 - 252
Target Start/End: Complemental strand, 48716383 - 48716275
Alignment:
Q  144 tgagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacacttt 243  Q
    ||||| |||||||||||||| |||||| |||||||||||| ||| ||| |||||||||||| |||||||| | ||||||||||| |||||||||||||||    
T  48716383 tgagtaatgatacatagacacccttaggtggcaatacaccatttgacatccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 48716284  T
Q  244 ctcttttct 252  Q
     ||||||||    
T  48716283 atcttttct 48716275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 145 - 245
Target Start/End: Complemental strand, 51898783 - 51898683
Alignment:
Q  145 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttc 244  Q
    |||| |||||||||||||||| |||| |||||||||||||||| |||||||||||||||| |||||||| | |||||||| || ||||||||||||||||    
T  51898783 gagtaatgatacatagacatctttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacactttc 51898684  T
Q  245 t 245  Q
    |    
T  51898683 t 51898683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 145 - 252
Target Start/End: Original strand, 38595154 - 38595261
Alignment:
Q  145 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttc 244  Q
    |||| |||||||||| ||| | |||| |||||||||||||||| |||||||||||||||| |||||||| | ||||||||||| | ||||||||||||||    
T  38595154 gagtaatgatacataaacacctttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcacactttc 38595253  T
Q  245 tcttttct 252  Q
    ||||||||    
T  38595254 tcttttct 38595261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 143 - 252
Target Start/End: Original strand, 37649196 - 37649305
Alignment:
Q  143 atgagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactt 242  Q
    |||||| |||||||||||||||| |||| ||||||||||| |||| |||||||||||||||| |||||||||| |||||| |  | ||||||||||||||    
T  37649196 atgagtaatgatacatagacatctttaggtggcaatacactctttgacacccacacaaaaatctgacacgtggtcacgtgaattccgcacaagcacactt 37649295  T
Q  243 tctcttttct 252  Q
    || |||||||    
T  37649296 tcccttttct 37649305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 144 - 249
Target Start/End: Complemental strand, 50591101 - 50590996
Alignment:
Q  144 tgagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacacttt 243  Q
    |||||||||||||||| ||| |||||| ||||||||||||| || |||||||||||||||| ||||| |||||||  ||||||| ||||||| |||||||    
T  50591101 tgagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacacttt 50591002  T
Q  244 ctcttt 249  Q
    ||||||    
T  50591001 ctcttt 50590996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 145 - 252
Target Start/End: Complemental strand, 23597191 - 23597084
Alignment:
Q  145 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttc 244  Q
    |||| |||||||||||||||| |||| ||||||||||| |||| | ||||||| |||||| |||||||||||||||| |||| ||||||| ||||||||     
T  23597191 gagtaatgatacatagacatcattaggtggcaatacactctttgatacccacataaaaatctgacacgtggccacgttgaccttgcacaaacacacttta 23597092  T
Q  245 tcttttct 252  Q
    ||||||||    
T  23597091 tcttttct 23597084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 145 - 252
Target Start/End: Complemental strand, 37926538 - 37926431
Alignment:
Q  145 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttc 244  Q
    ||||||||||||||||| ||| |||| |||||||||| | ||||||||||||| |||||| |||||||||||||| |||| || | ||||| ||||||||    
T  37926538 gagttatgatacatagatatctttaggtggcaatacatcttttaacacccacataaaaatctgacacgtggccacatggatcccgtacaagtacactttc 37926439  T
Q  245 tcttttct 252  Q
    ||||||||    
T  37926438 tcttttct 37926431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 145 - 252
Target Start/End: Original strand, 41758805 - 41758912
Alignment:
Q  145 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttc 244  Q
    |||| |||||||||||||| | ||| ||||||||||||||||| ||| |||||||||||| |||||||| | ||| ||||||| |||||| |||||||||    
T  41758805 gagtaatgatacatagacaccattaaatggcaatacaccctttgacaaccacacaaaaatctgacacgtagtcacatggaccccgcacaaacacactttc 41758904  T
Q  245 tcttttct 252  Q
    ||||||||    
T  41758905 tcttttct 41758912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 145 - 252
Target Start/End: Original strand, 50630458 - 50630565
Alignment:
Q  145 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttc 244  Q
    |||| |||||||||||| | |||||| |||||||||| |||||   |||||||||||||| |||||||| | ||||||||||| ||||||||||||||||    
T  50630458 gagtaatgatacatagatacccttaggtggcaatacatcctttgttacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 50630557  T
Q  245 tcttttct 252  Q
    ||||||||    
T  50630558 tcttttct 50630565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 144 - 249
Target Start/End: Complemental strand, 41608594 - 41608489
Alignment:
Q  144 tgagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacacttt 243  Q
    |||||||||||||||| |||||||||| ||||||||||||| || |||| ||||||||||| ||||| |||||||  ||||||| | ||||| |||||||    
T  41608594 tgagttatgatacataaacatccttaggtggcaatacaccccttgacactcacacaaaaatctgacatgtggccatatggaccccgtacaagtacacttt 41608495  T
Q  244 ctcttt 249  Q
    ||||||    
T  41608494 ctcttt 41608489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 145 - 252
Target Start/End: Original strand, 43132 - 43239
Alignment:
Q  145 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttc 244  Q
    |||| ||||||||||||||  |||||  | ||||||| ||||| |||||||||||||||| |||||||| | ||||||||| | ||||||||||||||||    
T  43132 gagtaatgatacatagacagtcttaggagacaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggactccgcacaagcacactttc 43231  T
Q  245 tcttttct 252  Q
    ||||||||    
T  43232 tcttttct 43239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 145 - 252
Target Start/End: Complemental strand, 49811627 - 49811520
Alignment:
Q  145 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttc 244  Q
    ||||||||||| |||||||||||||| || ||||||||| ||| ||| |||||||||||| |||||||| ||||  | ||| | ||||||||||||||||    
T  49811627 gagttatgatagatagacatccttaggtgacaatacaccatttgacatccacacaaaaatctgacacgtagccatatagactccgcacaagcacactttc 49811528  T
Q  245 tcttttct 252  Q
    ||||||||    
T  49811527 tcttttct 49811520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 145 - 252
Target Start/End: Complemental strand, 45044660 - 45044553
Alignment:
Q  145 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttc 244  Q
    ||||||||||||||| |  ||||||| |||||||||||| ||| ||||||| |||||||| ||||| || ||||| ||||||| |||||| |||| ||||    
T  45044660 gagttatgatacatacatttccttaggtggcaatacaccatttgacacccatacaaaaatctgacatgtagccacatggaccccgcacaaacacattttc 45044561  T
Q  245 tcttttct 252  Q
    ||||||||    
T  45044560 tcttttct 45044553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 145 - 249
Target Start/End: Complemental strand, 5959100 - 5958996
Alignment:
Q  145 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttc 244  Q
    ||||||||||||||| ||| |||||  ||||||||||||  || |||||||||||||||| ||||| |||| ||  ||||||| ||||||| ||||||||    
T  5959100 gagttatgatacataaacacccttaagtggcaatacacctcttgacacccacacaaaaatctgacatgtggtcatatggaccccgcacaagtacactttc 5959001  T
Q  245 tcttt 249  Q
    |||||    
T  5959000 tcttt 5958996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 143 - 245
Target Start/End: Original strand, 6260868 - 6260970
Alignment:
Q  143 atgagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactt 242  Q
    ||||||||||||| ||||| |||||||| ||| ||||||||| | |||||||||| |||||| | ||| |||| ||||||||||| ||| ||||||| ||    
T  6260868 atgagttatgatagatagatatccttaggtggtaatacacccctgaacacccacataaaaatctaacatgtggtcacgtggaccccgcataagcacattt 6260967  T
Q  243 tct 245  Q
    |||    
T  6260968 tct 6260970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 175 - 252
Target Start/End: Original strand, 13414791 - 13414868
Alignment:
Q  175 caatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctcttttct 252  Q
    ||||||||||||| |||||||||||||||| | |||||| | |||||||||||  |||||||||| ||||||||||||    
T  13414791 caatacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccacacaagcacattttctcttttct 13414868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 150 - 252
Target Start/End: Original strand, 26274437 - 26274539
Alignment:
Q  150 atgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctcttt 249  Q
    |||||||||||||| |||||  |||||||||| | ||| ||| ||||| |||||| |||||| | | |||||||| |||||||||| ||||||| |||||    
T  26274437 atgatacatagacacccttatgtggcaatacatcatttgacatccacagaaaaatctgacacatagtcacgtggatcctgcacaagtacactttttcttt 26274536  T
Q  250 tct 252  Q
    |||    
T  26274537 tct 26274539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 150 - 245
Target Start/End: Complemental strand, 11152472 - 11152378
Alignment:
Q  150 atgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttct 245  Q
    |||| ||||||||| |||||| |||||||||||||||  ||| |||||||||||| |||||||| | || || ||||| |||||||||| ||||||    
T  11152472 atgaaacatagaca-ccttaggtggcaatacacccttcgacatccacacaaaaatctgacacgtagtcatgtagaccccgcacaagcacgctttct 11152378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 143 - 249
Target Start/End: Original strand, 47748441 - 47748546
Alignment:
Q  143 atgagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactt 242  Q
    ||||||||||||||||| | | |||||| ||||||||||||| || ||||||| | |||||| ||||| |||||||  |||| || ||||||| | ||||    
T  47748441 atgagttatgatacataaatacccttaggtggcaatacaccc-ttgacacccatataaaaatctgacatgtggccatatggatcccgcacaagtatactt 47748539  T
Q  243 tctcttt 249  Q
    |||||||    
T  47748540 tctcttt 47748546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 146 - 249
Target Start/End: Original strand, 44453980 - 44454083
Alignment:
Q  146 agttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttct 245  Q
    |||||||||||||||||| | |||  |||||||||| |  || | |||||||||||||| ||||| ||||  ||||||| ||  |||||||||||||| |    
T  44453980 agttatgatacatagacacctttaagtggcaatacatctcttgatacccacacaaaaatctgacatgtggttacgtggatcccacacaagcacacttttt 44454079  T
Q  246 cttt 249  Q
    ||||    
T  44454080 cttt 44454083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 145 - 227
Target Start/End: Original strand, 7740733 - 7740815
Alignment:
Q  145 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccc 227  Q
    |||||||||||||| |||| |||||  || ||||||| || || ||||| ||| |||||||||||||||||| | ||||||||    
T  7740733 gagttatgatacattgacaaccttatgtgacaatacatccattgacacctacataaaaatatgacacgtggctatgtggaccc 7740815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 172 - 252
Target Start/End: Original strand, 48489328 - 48489407
Alignment:
Q  172 tggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctcttttct 252  Q
    ||||||||||||||  | || |||||||||||| ||||| |||| |||||||| || ||||||||||| ||||| ||||||    
T  48489328 tggcaatacaccctgga-catccacacaaaaatctgacatgtggtcacgtggatcccgcacaagcacattttctattttct 48489407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 227
Target Start/End: Complemental strand, 7447990 - 7447936
Alignment:
Q  172 tggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccc 227  Q
    ||||||||||||||||| ||||||||||||| | ||||||||||| || |||||||    
T  7447990 tggcaatacacccttta-cacccacacaaaattctgacacgtggcaacttggaccc 7447936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 216
Target Start/End: Complemental strand, 4401493 - 4401450
Alignment:
Q  172 tggcaatacaccctttaacacccacacaaaaatatgacacgtggc 216  Q
    ||||||||||||||||| ||||||||||||| | |||||||||||    
T  4401493 tggcaatacacccttta-cacccacacaaaattctgacacgtggc 4401450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 216
Target Start/End: Original strand, 50448195 - 50448238
Alignment:
Q  172 tggcaatacaccctttaacacccacacaaaaatatgacacgtggc 216  Q
    ||||||||||||||||| ||||||||||||| | |||||||||||    
T  50448195 tggcaatacacccttta-cacccacacaaaattctgacacgtggc 50448238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 86; Significance: 3e-41; HSPs: 39)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 143 - 252
Target Start/End: Complemental strand, 26141634 - 26141525
Alignment:
Q  143 atgagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactt 242  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||| ||| |||||||  |||||||||||||    
T  26141634 atgagttatgatacatagacatccttaggtggcaatacaccctttaacacccacacaaaaatctgacacgtggtcacatggaccccacacaagcacactt 26141535  T
Q  243 tctcttttct 252  Q
    ||||||||||    
T  26141534 tctcttttct 26141525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 145 - 252
Target Start/End: Complemental strand, 51419460 - 51419353
Alignment:
Q  145 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttc 244  Q
    ||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||| |||||||||||||| | ||||| ||||||||||||||||    
T  51419460 gagttatgatacatagacatccttagatgacaatacatcctttaacacccacacaaaaatctgacacgtggccacatagaccccgcacaagcacactttc 51419361  T
Q  245 tcttttct 252  Q
    ||||||||    
T  51419360 tcttttct 51419353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 143 - 252
Target Start/End: Original strand, 53982009 - 53982118
Alignment:
Q  143 atgagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactt 242  Q
    |||||| |||||||||||||| |||||| |||||||||||||||| |||||||||||||||| |||||||| | ||||||||||| ||||||||||||||    
T  53982009 atgagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 53982108  T
Q  243 tctcttttct 252  Q
    ||||||||||    
T  53982109 tctcttttct 53982118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 144 - 252
Target Start/End: Complemental strand, 20765016 - 20764908
Alignment:
Q  144 tgagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacacttt 243  Q
    |||||||||| |||||||||||||||| ||| ||||||| ||||||||||||||||||||| |||||||||||||| ||||||| | |||||||||||||    
T  20765016 tgagttatgagacatagacatccttaggtggtaatacactctttaacacccacacaaaaatctgacacgtggccacatggaccccgtacaagcacacttt 20764917  T
Q  244 ctcttttct 252  Q
    |||||||||    
T  20764916 ctcttttct 20764908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 145 - 252
Target Start/End: Complemental strand, 11348022 - 11347915
Alignment:
Q  145 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttc 244  Q
    |||||||||||||||||||||||||| || ||||||| ||||| ||| |||||||||||| |||||||||||||| ||||||||||| ||||||||||||    
T  11348022 gagttatgatacatagacatccttaggtgacaatacatcctttgacatccacacaaaaatctgacacgtggccacatggaccctgcataagcacactttc 11347923  T
Q  245 tcttttct 252  Q
    ||||||||    
T  11347922 tcttttct 11347915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 145 - 252
Target Start/End: Original strand, 47531865 - 47531972
Alignment:
Q  145 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttc 244  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| ||| |||||||||||||  || |||| ||||||||||||||||    
T  47531865 gagttatgatacatagacatccttagatggcaatacaccttttaacatccacacaagaatctgacacgtggccatatgaaccccgcacaagcacactttc 47531964  T
Q  245 tcttttct 252  Q
    ||||||||    
T  47531965 tcttttct 47531972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 144 - 252
Target Start/End: Original strand, 33644199 - 33644307
Alignment:
Q  144 tgagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacacttt 243  Q
    ||||| |||||||||||||| |||| | |||||||||||||||| |||||||||||||||| |||||||| | ||||||||||| |||||||||||||||    
T  33644199 tgagtaatgatacatagacacccttgggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 33644298  T
Q  244 ctcttttct 252  Q
    |||||||||    
T  33644299 ctcttttct 33644307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 145 - 252
Target Start/End: Complemental strand, 41189864 - 41189757
Alignment:
Q  145 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttc 244  Q
    ||||||||||||||| |||||||||| |||||||||| | ||| ||||||||| |||||| |||||||||||||| ||||||| ||||||||||||||||    
T  41189864 gagttatgatacatatacatccttaggtggcaatacatcatttgacacccacataaaaatttgacacgtggccacatggaccccgcacaagcacactttc 41189765  T
Q  245 tcttttct 252  Q
    ||||||||    
T  41189764 tcttttct 41189757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 149 - 252
Target Start/End: Original strand, 52629304 - 52629407
Alignment:
Q  149 tatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctctt 248  Q
    ||||||||||||||| |||||| |||||||||||||||| |||||||||||||||| |||||||| | ||||||||||| | ||||||||||||||||||    
T  52629304 tatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcacactttctctt 52629403  T
Q  249 ttct 252  Q
    ||||    
T  52629404 ttct 52629407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 145 - 249
Target Start/End: Complemental strand, 24700054 - 24699950
Alignment:
Q  145 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttc 244  Q
    |||| ||||||||||||||||||||| |||||||||||| ||| ||||||||| |||||| || ||||||||||||||||||||| |||| |||||||||    
T  24700054 gagtaatgatacatagacatccttagttggcaatacaccttttgacacccacataaaaatctggcacgtggccacgtggaccctgtacaaacacactttc 24699955  T
Q  245 tcttt 249  Q
    |||||    
T  24699954 tcttt 24699950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 145 - 252
Target Start/End: Original strand, 17470405 - 17470512
Alignment:
Q  145 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttc 244  Q
    |||| |||||||||||||| | |||| |||||||||||| |||||||||||||||||||| |||||||| | |||||||||||  |||||||||||||||    
T  17470405 gagtaatgatacatagacacctttaggtggcaatacaccttttaacacccacacaaaaatctgacacgtagtcacgtggaccccacacaagcacactttc 17470504  T
Q  245 tcttttct 252  Q
    ||||||||    
T  17470505 tcttttct 17470512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 145 - 252
Target Start/End: Original strand, 49607414 - 49607521
Alignment:
Q  145 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttc 244  Q
    |||| |||||||||||||| |||||| |||||||||||||||| |||||||||||||||| |||||||| | |||||||| ||  |||||||||||||||    
T  49607414 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccacacaagcacactttc 49607513  T
Q  245 tcttttct 252  Q
    ||||||||    
T  49607514 tcttttct 49607521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 145 - 252
Target Start/End: Complemental strand, 54868995 - 54868888
Alignment:
Q  145 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttc 244  Q
    |||| |||||||||||||| |||||| |||||||||||| ||| |||||||||||||||| |||||||| |  |||||||||| |||||| |||||||||    
T  54868995 gagtaatgatacatagacacccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtagttacgtggaccccgcacaatcacactttc 54868896  T
Q  245 tcttttct 252  Q
    ||||||||    
T  54868895 tcttttct 54868888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 150 - 252
Target Start/End: Original strand, 31456694 - 31456796
Alignment:
Q  150 atgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctcttt 249  Q
    |||||||||||||| || |||  ||||||||||||||| |||||||||||||||| |||||||| | || |||||||| |||||||||||||||||||||    
T  31456694 atgatacatagacacccataggcggcaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcacactttctcttt 31456793  T
Q  250 tct 252  Q
    |||    
T  31456794 tct 31456796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 145 - 249
Target Start/End: Original strand, 8076393 - 8076497
Alignment:
Q  145 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttc 244  Q
    |||| |||||||||| ||| |||||| ||||| |||||||||| |||||||||||||||| | |||||| | ||||||||||| ||||||||||||||||    
T  8076393 gagtaatgatacataaacacccttaggtggcagtacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcacactttc 8076492  T
Q  245 tcttt 249  Q
    |||||    
T  8076493 tcttt 8076497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 145 - 248
Target Start/End: Complemental strand, 27714991 - 27714888
Alignment:
Q  145 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttc 244  Q
    |||| |||||||||||||| | |||| ||| |||||||||||| |||||||||||||||| |||||||| | || |||||||| ||||||||||||||||    
T  27714991 gagtaatgatacatagacacctttaggtggtaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcacactttc 27714892  T
Q  245 tctt 248  Q
    ||||    
T  27714891 tctt 27714888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 145 - 252
Target Start/End: Complemental strand, 11095453 - 11095348
Alignment:
Q  145 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttc 244  Q
    |||| |||||||||||||| |||||| |||||||||||||||| |||||||||||||||| |||||||| | |||||  |||| ||| || |||||||||    
T  11095453 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgt--accccgcataaacacactttc 11095356  T
Q  245 tcttttct 252  Q
    ||||||||    
T  11095355 tcttttct 11095348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 145 - 249
Target Start/End: Complemental strand, 33118951 - 33118847
Alignment:
Q  145 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttc 244  Q
    ||||||||||||||||||| |||||| || ||||||||||||| |||||||||||||||| |||||||| | |||||||| ||  || || |||||||||    
T  33118951 gagttatgatacatagacacccttaggtgacaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggatccctcagaaacacactttc 33118852  T
Q  245 tcttt 249  Q
    |||||    
T  33118851 tcttt 33118847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 145 - 249
Target Start/End: Original strand, 35536626 - 35536730
Alignment:
Q  145 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttc 244  Q
    |||| ||||||||||||||||||||  |||||||||||| ||| ||||||||| |||||| |||||||||| || ||||||| | ||||||||||||| |    
T  35536626 gagtaatgatacatagacatccttatgtggcaatacaccatttgacacccacataaaaatgtgacacgtggtcatgtggaccttacacaagcacacttcc 35536725  T
Q  245 tcttt 249  Q
    |||||    
T  35536726 tcttt 35536730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 150 - 252
Target Start/End: Complemental strand, 48587186 - 48587084
Alignment:
Q  150 atgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctcttt 249  Q
    |||||||||||| | |||||| |||||||||||||||| ||||| ||| |||||| |||||||| | |||||||| || ||||||| |||||||||||||    
T  48587186 atgatacatagatacccttaggtggcaatacaccctttgacacctacataaaaatctgacacgtagtcacgtggatcccgcacaagtacactttctcttt 48587087  T
Q  250 tct 252  Q
    |||    
T  48587086 tct 48587084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 148 - 249
Target Start/End: Original strand, 26754698 - 26754799
Alignment:
Q  148 ttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctct 247  Q
    ||||||| |||||||| |||||| |||||||||||||||  ||| |||||||||||| ||||| |||| ||| ||||||| ||||||||||| |||||||    
T  26754698 ttatgattcatagacacccttaggtggcaatacacccttggacatccacacaaaaatctgacatgtggtcacatggaccccgcacaagcacattttctct 26754797  T
Q  248 tt 249  Q
    ||    
T  26754798 tt 26754799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 145 - 249
Target Start/End: Original strand, 8956762 - 8956866
Alignment:
Q  145 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttc 244  Q
    |||| ||||||||||||||||||||  |||||||||| ||||| ||||||||| |||||| |||||||||  || ||||||| | ||||||||||||| |    
T  8956762 gagtaatgatacatagacatccttatgtggcaatacatcctttgacacccacataaaaatgtgacacgtgttcatgtggaccttacacaagcacacttcc 8956861  T
Q  245 tcttt 249  Q
    |||||    
T  8956862 tcttt 8956866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 145 - 249
Target Start/End: Complemental strand, 14623939 - 14623835
Alignment:
Q  145 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttc 244  Q
    |||| ||||||||||||||||||||| ||||||||||||| || ||||||||| |||||| ||||| |||  || |||||||   |||||||||||||||    
T  14623939 gagtaatgatacatagacatccttaggtggcaatacaccccttgacacccacataaaaatctgacatgtgttcatgtggacctcacacaagcacactttc 14623840  T
Q  245 tcttt 249  Q
    |||||    
T  14623839 tcttt 14623835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 145 - 252
Target Start/End: Original strand, 11907371 - 11907478
Alignment:
Q  145 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttc 244  Q
    ||||||||||||||||||| |||||| || |||||||| | | ||||| ||||||||||| ||||| |||| ||  ||||||| ||||||||||| ||||    
T  11907371 gagttatgatacatagacacccttaggtgacaatacacacctgaacactcacacaaaaatctgacatgtggtcatatggaccccgcacaagcacattttc 11907470  T
Q  245 tcttttct 252  Q
    ||||||||    
T  11907471 tcttttct 11907478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 150 - 249
Target Start/End: Complemental strand, 13898150 - 13898051
Alignment:
Q  150 atgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctcttt 249  Q
    |||||| ||| |||||||||| ||||||||||||| || ||||||||| |||||| |||||||||  || |||||||   ||||||||||||||||||||    
T  13898150 atgatagataaacatccttaggtggcaatacaccccttgacacccacataaaaatctgacacgtgttcatgtggacctcacacaagcacactttctcttt 13898051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 144 - 249
Target Start/End: Complemental strand, 45058653 - 45058549
Alignment:
Q  144 tgagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacacttt 243  Q
    |||||||||||||||| ||| |||||| ||||||||||||| || ||||||||| |||||| ||||| ||| |||  ||||||| ||||||| | |||||    
T  45058653 tgagttatgatacataaacacccttaggtggcaatacaccc-ttgacacccacataaaaatctgacatgtgaccatatggaccccgcacaagtatacttt 45058555  T
Q  244 ctcttt 249  Q
    ||||||    
T  45058554 ctcttt 45058549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 145 - 252
Target Start/End: Original strand, 9562999 - 9563106
Alignment:
Q  145 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttc 244  Q
    |||| |||||||||| ||| | ||||||| ||||||| ||||| ||| ||| | |||||| |||||||| | |||||||| ||||||||| |||||||||    
T  9562999 gagtaatgatacataaacaccattagatgacaatacaacctttgacatccatataaaaatctgacacgtagtcacgtggatcctgcacaaacacactttc 9563098  T
Q  245 tcttttct 252  Q
    ||| ||||    
T  9563099 tctcttct 9563106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 150 - 249
Target Start/End: Complemental strand, 30801828 - 30801729
Alignment:
Q  150 atgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctcttt 249  Q
    |||||||||||||| |||||| ||  |||||||||||| | |||||||||||||||||||| || | ||  |||||||  |||||||||| |||||||||    
T  30801828 atgatacatagacacccttaggtgataatacaccctttgatacccacacaaaaatatgacatgtagtcatatggaccccacacaagcacattttctcttt 30801729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 167 - 249
Target Start/End: Complemental strand, 36331407 - 36331325
Alignment:
Q  167 ttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctcttt 249  Q
    |||| ||||||| ||||| || |||||||||||||||| ||||| |||||||  ||||||| ||||||| |||||||||||||    
T  36331407 ttaggtggcaatgcaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttctcttt 36331325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 145 - 249
Target Start/End: Original strand, 41080709 - 41080811
Alignment:
Q  145 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttc 244  Q
    |||| ||||||||||||||||||||| | |||| ||||||||| |||||||| ||||||| ||| | |||| || ||||||||  |||||||||| ||||    
T  41080709 gagtaatgatacatagacatccttag-tagcaaaacaccctttgacacccacgcaaaaatctgatatgtggtcatgtggaccc-acacaagcacattttc 41080806  T
Q  245 tcttt 249  Q
    |||||    
T  41080807 tcttt 41080811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 145 - 249
Target Start/End: Complemental strand, 48375806 - 48375702
Alignment:
Q  145 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttc 244  Q
    |||||||||| |||||||| |||||| || |||||||||| | || | ||| |||||||| ||||  |||| ||| ||||||| ||||||||||| ||||    
T  48375806 gagttatgattcatagacacccttaggtgacaatacacccctgaaaatccatacaaaaatctgacgtgtggtcacatggaccccgcacaagcacattttc 48375707  T
Q  245 tcttt 249  Q
    |||||    
T  48375706 tcttt 48375702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 145 - 252
Target Start/End: Complemental strand, 36707524 - 36707421
Alignment:
Q  145 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttc 244  Q
    |||| |||||||||||| | |||||| || ||||||||||||| ||| |||||||||||| |||||||| |  ||||||| || ||    ||||||||||    
T  36707524 gagtaatgatacatagatacccttaggtgacaatacaccctttgacatccacacaaaaatctgacacgtagttacgtggatcccgc----gcacactttc 36707429  T
Q  245 tcttttct 252  Q
    ||||||||    
T  36707428 tcttttct 36707421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 145 - 204
Target Start/End: Complemental strand, 36331478 - 36331419
Alignment:
Q  145 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaat 204  Q
    ||||||||||||||| ||| |||||||||||||| ||||| || ||| ||||||||||||    
T  36331478 gagttatgatacataaacacccttagatggcaatgcaccccttgacatccacacaaaaat 36331419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 173 - 234
Target Start/End: Complemental strand, 40480913 - 40480853
Alignment:
Q  173 ggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaa 234  Q
    |||||||||||||||| ||||||||||||| | ||||||||||| || |||||||| |||||    
T  40480913 ggcaatacacccttta-cacccacacaaaattctgacacgtggcaacctggaccctacacaa 40480853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 249
Target Start/End: Complemental strand, 25395429 - 25395329
Alignment:
Q  149 tatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctctt 248  Q
    ||||||||||| |||||||||  |||| ||||| || |||| |||||||||||||| ||||| ||||| |  | |||||  ||||| |||| ||||||||    
T  25395429 tatgatacataaacatccttatgtggccatacatcccttaatacccacacaaaaatctgacatgtggctatatagaccccacacaaacacattttctctt 25395330  T
Q  249 t 249  Q
    |    
T  25395329 t 25395329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 145 - 249
Target Start/End: Complemental strand, 35965874 - 35965778
Alignment:
Q  145 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttc 244  Q
    |||| |||||||||| |||||||||  ||  |||||| ||||| ||||||||| |||||| ||||||||||        | |||||||||||||||||||    
T  35965874 gagtaatgatacatatacatccttaagtgataatacatcctttgacacccacataaaaatctgacacgtgg--------atcctgcacaagcacactttc 35965783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 227
Target Start/End: Original strand, 53581793 - 53581847
Alignment:
Q  172 tggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccc 227  Q
    ||||||||||||||||| ||||||||||||| | ||||||||||| || |||||||    
T  53581793 tggcaatacacccttta-cacccacacaaaattctgacacgtggcaacctggaccc 53581847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 148 - 249
Target Start/End: Original strand, 42823114 - 42823215
Alignment:
Q  148 ttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctct 247  Q
    |||||||||||| ||| | |||  ||| ||||||||| || ||||||||| |||||| ||||| |||| ||  ||||||| ||| ||| | |||||||||    
T  42823114 ttatgatacataaacaccattatgtggtaatacaccccttgacacccacaaaaaaatttgacatgtggtcatatggaccccgcataagtatactttctct 42823213  T
Q  248 tt 249  Q
    ||    
T  42823214 tt 42823215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 228
Target Start/End: Complemental strand, 52629993 - 52629938
Alignment:
Q  172 tggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccct 228  Q
    ||||||||||||||||| ||||||||||||| | |||||||| || || ||||||||    
T  52629993 tggcaatacacccttta-cacccacacaaaattctgacacgtagcaacctggaccct 52629938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 82; Significance: 8e-39; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 143 - 252
Target Start/End: Original strand, 28177773 - 28177882
Alignment:
Q  143 atgagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactt 242  Q
    |||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||| |||||||||| ||| ||||||| |||||| |||||||    
T  28177773 atgagttatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtggtcacatggaccccgcacaaacacactt 28177872  T
Q  243 tctcttttct 252  Q
    ||||||||||    
T  28177873 tctcttttct 28177882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 144 - 252
Target Start/End: Original strand, 26720515 - 26720623
Alignment:
Q  144 tgagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacacttt 243  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||| ||| |||||| |||||||||||||| |||| || |||||||||||||||    
T  26720515 tgagttatgatacatagacatccttaggtggcaatacaccctttaacacctacaaaaaaatctgacacgtggccacatggatcccgcacaagcacacttt 26720614  T
Q  244 ctcttttct 252  Q
    |||||||||    
T  26720615 ctcttttct 26720623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 144 - 252
Target Start/End: Original strand, 26990264 - 26990372
Alignment:
Q  144 tgagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacacttt 243  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||| ||| |||||| |||||||||||||| |||| || |||||||||||||||    
T  26990264 tgagttatgatacatagacatccttaggtggcaatacaccctttaacacctacaaaaaaatctgacacgtggccacatggatcccgcacaagcacacttt 26990363  T
Q  244 ctcttttct 252  Q
    |||||||||    
T  26990364 ctcttttct 26990372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 143 - 252
Target Start/End: Original strand, 40145405 - 40145514
Alignment:
Q  143 atgagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactt 242  Q
    |||||| |||||||||||||| |||||| |||||||||||||||||||| |||||||||||| |||||||| | ||||||||||| ||||||||||||||    
T  40145405 atgagtaatgatacatagacacccttaggtggcaatacaccctttaacatccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 40145504  T
Q  243 tctcttttct 252  Q
    ||||||||||    
T  40145505 tctcttttct 40145514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 145 - 252
Target Start/End: Original strand, 2740274 - 2740381
Alignment:
Q  145 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttc 244  Q
    |||| ||||||||||||||||||||| |||||||||||||||| |||||||||||||||| |||||||| | |||||||| || ||||||||||||||||    
T  2740274 gagtaatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacactttc 2740373  T
Q  245 tcttttct 252  Q
    ||||||||    
T  2740374 tcttttct 2740381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 150 - 250
Target Start/End: Complemental strand, 18520979 - 18520879
Alignment:
Q  150 atgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctcttt 249  Q
    |||||||||||||| |||||| |||||||||||||||| |||||||||||||||| |||||||| | ||||||||||| |||||||||||||||||||||    
T  18520979 atgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttt 18520880  T
Q  250 t 250  Q
    |    
T  18520879 t 18520879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 143 - 252
Target Start/End: Complemental strand, 33149740 - 33149631
Alignment:
Q  143 atgagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactt 242  Q
    |||||| |||||||||||||| |||||| ||| |||||||||||| |||||||||||||||| |||||||| | |||||||| || ||||||||||||||    
T  33149740 atgagtaatgatacatagacacccttaggtggtaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggatcccgcacaagcacactt 33149641  T
Q  243 tctcttttct 252  Q
    ||||||||||    
T  33149640 tctcttttct 33149631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 145 - 252
Target Start/End: Original strand, 6679698 - 6679805
Alignment:
Q  145 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttc 244  Q
    ||||||||||||||||||||| |||| |||||||||||| ||| |||||||||||||||| |||||||||| ||| ||||||| |||||| |||| ||||    
T  6679698 gagttatgatacatagacatctttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtggtcacatggaccccgcacaaacacattttc 6679797  T
Q  245 tcttttct 252  Q
    ||||||||    
T  6679798 tcttttct 6679805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 145 - 252
Target Start/End: Complemental strand, 15409710 - 15409603
Alignment:
Q  145 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttc 244  Q
    |||||||||||||||||||||||||| || |||||||  |||| |||||||||||||||| |||||||| ||||| ||||||| ||||||||||||| ||    
T  15409710 gagttatgatacatagacatccttaggtgacaatacattctttgacacccacacaaaaatctgacacgtagccacatggaccccgcacaagcacactctc 15409611  T
Q  245 tcttttct 252  Q
    ||||||||    
T  15409610 tcttttct 15409603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 145 - 252
Target Start/End: Complemental strand, 36733042 - 36732935
Alignment:
Q  145 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttc 244  Q
    |||| |||||||||||||| |||||| | |||||||||||||| |||||||||||||||| |||||| | | ||||||||||| ||||||||||||||||    
T  36733042 gagtaatgatacatagacacccttaggtagcaatacaccctttgacacccacacaaaaatctgacacatagtcacgtggaccccgcacaagcacactttc 36732943  T
Q  245 tcttttct 252  Q
    ||||||||    
T  36732942 tcttttct 36732935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 145 - 249
Target Start/End: Complemental strand, 2252268 - 2252164
Alignment:
Q  145 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttc 244  Q
    ||||||||||||||| |||||||||| ||||||||||||| || |||||||||||||||| ||||| |||||||  ||||||| ||||||| ||||||||    
T  2252268 gagttatgatacataaacatccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttc 2252169  T
Q  245 tcttt 249  Q
    |||||    
T  2252168 tcttt 2252164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 143 - 252
Target Start/End: Complemental strand, 42414404 - 42414295
Alignment:
Q  143 atgagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactt 242  Q
    |||||| |||||||||||||| |  ||| |||||||||||||||| |||||||||||||||| |||||||| | || |||||||| ||||||||||||||    
T  42414404 atgagtaatgatacatagacaccagtaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcacactt 42414305  T
Q  243 tctcttttct 252  Q
    | ||||||||    
T  42414304 tatcttttct 42414295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 145 - 249
Target Start/End: Complemental strand, 3921365 - 3921261
Alignment:
Q  145 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttc 244  Q
    ||||||||||||||| ||| |||||| ||||||||||||| || |||||||||||||||| ||||| |||||||  ||||||| ||||||| ||||||||    
T  3921365 gagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttc 3921266  T
Q  245 tcttt 249  Q
    |||||    
T  3921265 tcttt 3921261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 152 - 248
Target Start/End: Original strand, 13811659 - 13811755
Alignment:
Q  152 gatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctctt 248  Q
    |||||||||||| |||||| |||||||||| | ||| |||||||||||||||| |||||||| | ||||||||||| ||||||||||||||||||||    
T  13811659 gatacatagacacccttaggtggcaatacatcatttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctctt 13811755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 144 - 252
Target Start/End: Original strand, 35785198 - 35785306
Alignment:
Q  144 tgagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacacttt 243  Q
    ||||| |||||||||||||| |||||| |||||||||||| ||| |||||||||||||||| |||||||| |  ||||||| || |||||| ||||||||    
T  35785198 tgagtaatgatacatagacacccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtagttacgtggatcccgcacaatcacacttt 35785297  T
Q  244 ctcttttct 252  Q
    |||||||||    
T  35785298 ctcttttct 35785306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 143 - 250
Target Start/End: Original strand, 14831812 - 14831919
Alignment:
Q  143 atgagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactt 242  Q
    |||||| ||||||||||||||  ||||| |||||||||||||||| ||||||||| |||||| |||||||| | |||||||| || ||||||||||||||    
T  14831812 atgagtaatgatacatagacactcttaggtggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacactt 14831911  T
Q  243 tctctttt 250  Q
    ||| ||||    
T  14831912 tctttttt 14831919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 145 - 245
Target Start/End: Complemental strand, 20073616 - 20073516
Alignment:
Q  145 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttc 244  Q
    |||| |||||| ||||||||| ||||||| ||||||||||||| |||| |||| |||||| |  |||||| |||||||||||||||||||||||||||||    
T  20073616 gagtaatgatatatagacatcattagatgacaatacaccctttgacactcacataaaaatcttgcacgtgaccacgtggaccctgcacaagcacactttc 20073517  T
Q  245 t 245  Q
    |    
T  20073516 t 20073516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 145 - 249
Target Start/End: Complemental strand, 35943992 - 35943888
Alignment:
Q  145 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttc 244  Q
    ||||||||||||||||||| |||||| |||||||||| | ||| |||||||||||||||| |||||||| |  ||||||| ||  |||||||||||||||    
T  35943992 gagttatgatacatagacacccttaggtggcaatacatcatttgacacccacacaaaaatctgacacgtagttacgtggatcccacacaagcacactttc 35943893  T
Q  245 tcttt 249  Q
    |||||    
T  35943892 tcttt 35943888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 145 - 245
Target Start/End: Original strand, 31008988 - 31009088
Alignment:
Q  145 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttc 244  Q
    ||||||||||||||| |||||||||| || |||||||  |||  |||||||||||||||| |||||||| | |||||||| || ||||||||||||||||    
T  31008988 gagttatgatacataaacatccttaggtgacaatacattcttccacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacactttc 31009087  T
Q  245 t 245  Q
    |    
T  31009088 t 31009088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 145 - 250
Target Start/End: Complemental strand, 33825424 - 33825319
Alignment:
Q  145 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttc 244  Q
    |||| ||||| ||||||||| ||||| ||||||||||| | || ||||||||| |||||| |||||||||  || ||| ||| | |||||||||||||||    
T  33825424 gagtaatgatgcatagacattcttaggtggcaatacactccttgacacccacataaaaatctgacacgtgttcatgtgaaccttacacaagcacactttc 33825325  T
Q  245 tctttt 250  Q
    ||||||    
T  33825324 tctttt 33825319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 150 - 250
Target Start/End: Complemental strand, 36875698 - 36875607
Alignment:
Q  150 atgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctcttt 249  Q
    |||||||||||||| |||||| |||||||||||||||| |||||||||||||||||         | |||||||| || |||||||||||||||||||||    
T  36875698 atgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaata---------gtcacgtggatcccgcacaagcacactttctcttt 36875608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 144 - 249
Target Start/End: Complemental strand, 6260102 - 6259997
Alignment:
Q  144 tgagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacacttt 243  Q
    ||||| |||||||||| ||| || ||| || |||||||||||||||||||||| ||||||| | |||| ||| ||| ||||||   || |||||||||||    
T  6260102 tgagtaatgatacatacacaaccataggtgacaatacaccctttaacacccacgcaaaaatctaacacatggtcacatggacctcacagaagcacacttt 6260003  T
Q  244 ctcttt 249  Q
    ||||||    
T  6260002 ctcttt 6259997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 145 - 246
Target Start/End: Original strand, 38296203 - 38296304
Alignment:
Q  145 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttc 244  Q
    ||||||||||||||||||   ||||| || |||||||||  |||| ||||||||||||||  ||||||| || ||||||| ||  |||||||||||||||    
T  38296203 gagttatgatacatagactatcttaggtgtcaatacacctcttaatacccacacaaaaatcagacacgtagctacgtggatccaacacaagcacactttc 38296302  T
Q  245 tc 246  Q
    ||    
T  38296303 tc 38296304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 149 - 204
Target Start/End: Original strand, 10356638 - 10356694
Alignment:
Q  149 tatgatacatagacatccttagatggcaataca-ccctttaacacccacacaaaaat 204  Q
    |||||||||||||||||||||| |||||||||| ||| || ||||||||||||||||    
T  10356638 tatgatacatagacatccttaggtggcaatacatcccattgacacccacacaaaaat 10356694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 145 - 249
Target Start/End: Complemental strand, 39688997 - 39688893
Alignment:
Q  145 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttc 244  Q
    ||||||||||||||| ||| |||||  |||||||||| || || |||||||||||||||| ||| | |||| ||  || |||| ||| ||| ||||||||    
T  39688997 gagttatgatacataaacacccttaagtggcaatacatcccttgacacccacacaaaaatctgatatgtggtcatatgaaccccgcataagtacactttc 39688898  T
Q  245 tcttt 249  Q
    |||||    
T  39688897 tcttt 39688893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 145 - 249
Target Start/End: Original strand, 9603813 - 9603917
Alignment:
Q  145 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttc 244  Q
    |||| |||||||||| |||||||||| ||  ||||||| | || ||||| |||||||||| |||||| ||| ||  |||||||   |||| |||||||||    
T  9603813 gagtaatgatacatatacatccttaggtgataatacactcattcacacctacacaaaaatctgacacatggtcatatggaccccatacaatcacactttc 9603912  T
Q  245 tcttt 249  Q
    |||||    
T  9603913 tcttt 9603917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 189 - 249
Target Start/End: Original strand, 21370048 - 21370108
Alignment:
Q  189 acacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctcttt 249  Q
    |||||||| ||||||| ||||| |||| ||||||||||| |||||| |||| |||||||||    
T  21370048 acacccactcaaaaatctgacatgtggtcacgtggaccccgcacaaacacattttctcttt 21370108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 150 - 249
Target Start/End: Original strand, 16327906 - 16328005
Alignment:
Q  150 atgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctcttt 249  Q
    |||||| ||| | |||||||| |||||||||| || || ||||||||| |||||| |||||||||  || ||| |||   |||||||||||||| |||||    
T  16327906 atgatagataaatatccttaggtggcaatacatccattgacacccacataaaaatctgacacgtgttcatgtgcacctcacacaagcacactttttcttt 16328005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 193 - 252
Target Start/End: Original strand, 31132392 - 31132451
Alignment:
Q  193 ccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctcttttct 252  Q
    |||||||||||| ||||| || | ||||||||||| ||||||||| ||||| ||||||||    
T  31132392 ccacacaaaaatctgacaagtagtcacgtggaccccgcacaagcatactttttcttttct 31132451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 153 - 236
Target Start/End: Complemental strand, 41470508 - 41470425
Alignment:
Q  153 atacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagc 236  Q
    ||||||||||| | |||| |||||||||| ||||||| |  || | |||||| |||||||| | ||||||||||| ||||||||    
T  41470508 atacatagacacctttaggtggcaatacatcctttaaaattcatataaaaatctgacacgtagtcacgtggaccccgcacaagc 41470425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 250
Target Start/End: Complemental strand, 39557586 - 39557512
Alignment:
Q  176 aatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctctttt 250  Q
    ||||||||  |||||| |||||||||||| |||||||||  ||| |||||||   |||| |||||||||||||||    
T  39557586 aatacacctcttaacatccacacaaaaatctgacacgtgatcacatggaccccatacaatcacactttctctttt 39557512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 80; Significance: 1e-37; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 145 - 252
Target Start/End: Original strand, 31976248 - 31976355
Alignment:
Q  145 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttc 244  Q
    |||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||| |||||||||| ||| || |||| ||||||||||||||||    
T  31976248 gagttatgatacatagacatccttaggtggcaatataccctttaacacccacacaaaaatctgacacgtggtcacatgaaccccgcacaagcacactttc 31976347  T
Q  245 tcttttct 252  Q
    ||||||||    
T  31976348 tcttttct 31976355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 143 - 252
Target Start/End: Original strand, 32869676 - 32869785
Alignment:
Q  143 atgagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactt 242  Q
    |||||| | |||||||||||| |||||| |||||||||||||||| |||||||||||||||| |||||||| | ||||||||||| ||||||||||||||    
T  32869676 atgagtaaagatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 32869775  T
Q  243 tctcttttct 252  Q
    ||||||||||    
T  32869776 tctcttttct 32869785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 150 - 252
Target Start/End: Complemental strand, 22880753 - 22880651
Alignment:
Q  150 atgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctcttt 249  Q
    |||||||||||||| |||||| |||||||||||||||| |||||||||||||| | |||||||| | ||||||||||| |||||||||||||||||||||    
T  22880753 atgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaattctgacacgtagtcacgtggaccccgcacaagcacactttctcttt 22880654  T
Q  250 tct 252  Q
    |||    
T  22880653 tct 22880651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 143 - 252
Target Start/End: Original strand, 17598552 - 17598661
Alignment:
Q  143 atgagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactt 242  Q
    |||||| |||||||||||||| |||||| |||||||||| | ||| |||||||||||||||| |||||||| | ||||||||||| ||||||||||||||    
T  17598552 atgagtaatgatacatagacacccttaggtggcaatacatcttttgacacccacacaaaaatctgacacgttgtcacgtggaccccgcacaagcacactt 17598651  T
Q  243 tctcttttct 252  Q
    ||||||||||    
T  17598652 tctcttttct 17598661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 145 - 252
Target Start/End: Complemental strand, 31110859 - 31110754
Alignment:
Q  145 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttc 244  Q
    |||||||||||||||||||||||||| |||||||||||||||| |||| ||||  ||||| ||||||||  |||| ||||||||||||||||||||||||    
T  31110859 gagttatgatacatagacatccttaggtggcaatacaccctttgacactcaca--aaaatctgacacgtaaccacatggaccctgcacaagcacactttc 31110762  T
Q  245 tcttttct 252  Q
    ||||||||    
T  31110761 tcttttct 31110754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 145 - 252
Target Start/End: Original strand, 29857827 - 29857934
Alignment:
Q  145 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttc 244  Q
    |||| |||||||||||||| | ||||||||||||||||| |||||||||||||||||||| |||||||| |  ||||||| || ||| ||||||||||||    
T  29857827 gagtaatgatacatagacacctttagatggcaatacaccttttaacacccacacaaaaatctgacacgtagttacgtggatcccgcataagcacactttc 29857926  T
Q  245 tcttttct 252  Q
    ||||||||    
T  29857927 tcttttct 29857934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 144 - 249
Target Start/End: Complemental strand, 15508125 - 15508020
Alignment:
Q  144 tgagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacacttt 243  Q
    |||||||||||||||| ||| |||||| ||||||||||||| || |||||||||||||||| ||||| |||||||  ||||||| ||||||| |||||||    
T  15508125 tgagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacacttt 15508026  T
Q  244 ctcttt 249  Q
    ||||||    
T  15508025 ctcttt 15508020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 145 - 249
Target Start/End: Complemental strand, 15990142 - 15990038
Alignment:
Q  145 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttc 244  Q
    ||||||||||||||| ||| |||||| ||||||||||||| || |||||||||||||||| ||||| |||||||  ||||||| ||||||| ||||||||    
T  15990142 gagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttc 15990043  T
Q  245 tcttt 249  Q
    |||||    
T  15990042 tcttt 15990038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 145 - 249
Target Start/End: Complemental strand, 30341460 - 30341356
Alignment:
Q  145 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttc 244  Q
    ||||||||||||||| ||| |||||| ||||||||||||| || |||||||||||||||| ||||| |||||||  ||||||| ||||||| ||||||||    
T  30341460 gagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttc 30341361  T
Q  245 tcttt 249  Q
    |||||    
T  30341360 tcttt 30341356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 145 - 252
Target Start/End: Original strand, 11427616 - 11427725
Alignment:
Q  145 gagttatgatacatagacatcct--tagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactt 242  Q
    |||| |||||||||||||| |||  ||| |||||||||| ||||| |||||||||||||||| |||||||| | |||||||| || ||||||||||||||    
T  11427616 gagtaatgatacatagacaccctcttaggtggcaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacactt 11427715  T
Q  243 tctcttttct 252  Q
    ||||||||||    
T  11427716 tctcttttct 11427725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 144 - 249
Target Start/End: Original strand, 4231547 - 4231652
Alignment:
Q  144 tgagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacacttt 243  Q
    ||||||||||| |||| ||||| |||| ||||||||||||| ||  ||||||||||||||| |||||||||||||  ||||||| ||||||| |||||||    
T  4231547 tgagttatgattcataaacatcattaggtggcaatacaccccttgccacccacacaaaaatctgacacgtggccatatggaccccgcacaagtacacttt 4231646  T
Q  244 ctcttt 249  Q
    ||||||    
T  4231647 ctcttt 4231652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 145 - 252
Target Start/End: Complemental strand, 6209565 - 6209458
Alignment:
Q  145 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttc 244  Q
    |||| |||||||||||||| |||||| |||||||||||  ||| |||| ||||||||||| || ||||| | ||||||||||| |||| |||||||||||    
T  6209565 gagtaatgatacatagacacccttaggtggcaatacactatttgacactcacacaaaaatctgtcacgtagtcacgtggaccccgcactagcacactttc 6209466  T
Q  245 tcttttct 252  Q
    ||||||||    
T  6209465 tcttttct 6209458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 144 - 252
Target Start/End: Complemental strand, 31109501 - 31109393
Alignment:
Q  144 tgagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacacttt 243  Q
    ||||| |||||  ||||||| |||||| |||||||||||||||| ||| |||||||||||| |||||||| | ||||| ||||| ||| ||| |||||||    
T  31109501 tgagtaatgattaatagacacccttaggtggcaatacaccctttgacatccacacaaaaatctgacacgtagtcacgtagaccccgcaaaagtacacttt 31109402  T
Q  244 ctcttttct 252  Q
    |||||||||    
T  31109401 ctcttttct 31109393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 150 - 250
Target Start/End: Complemental strand, 28536581 - 28536483
Alignment:
Q  150 atgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctcttt 249  Q
    |||||||||| |||||||||| |||||||||| || || |||||||||||||||| ||||||  || || ||||||||  ||||||||||||||||||||    
T  28536581 atgatacataaacatccttaggtggcaatacaacccttgacacccacacaaaaatctgacac--ggtcatgtggaccccacacaagcacactttctcttt 28536484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 149 - 249
Target Start/End: Complemental strand, 9379808 - 9379708
Alignment:
Q  149 tatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctctt 248  Q
    ||||||||||||||||||||||||| ||||||| || || ||||||| |||||||| ||||||||||||| ||||| |   ||||| |||| ||||||||    
T  9379808 tatgatacatagacatccttagatgacaatacatcccttgacacccatacaaaaatttgacacgtggccatgtggatctcacacaaacacattttctctt 9379709  T
Q  249 t 249  Q
    |    
T  9379708 t 9379708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 141 - 249
Target Start/End: Complemental strand, 31953134 - 31953026
Alignment:
Q  141 acatgagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacac 240  Q
    |||||||| |||||| |||||||||||||| ||||||||||||| || ||||||||| |||||| ||||| |||  || |||||||   ||||| |||||    
T  31953134 acatgagtaatgatagatagacatccttaggtggcaatacaccccttgacacccacataaaaatctgacatgtgttcatgtggacctcacacaaacacac 31953035  T
Q  241 tttctcttt 249  Q
    |||||||||    
T  31953034 tttctcttt 31953026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 176 - 252
Target Start/End: Complemental strand, 23128196 - 23128120
Alignment:
Q  176 aatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctcttttct 252  Q
    |||||| ||||| |||||||||||||||| |||||||| | |||||||| ||  |||||||||||||||||||||||    
T  23128196 aatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggatcccacacaagcacactttctcttttct 23128120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 145 - 250
Target Start/End: Original strand, 15832577 - 15832682
Alignment:
Q  145 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttc 244  Q
    |||| |||||||||||||| | |||| || ||||| | | ||| |||||||||||||||| |||||||| | |||||||| |||||||||  ||| ||||    
T  15832577 gagtaatgatacatagacacctttaggtgacaataaatcatttgacacccacacaaaaatttgacacgtagtcacgtggatcctgcacaaatacattttc 15832676  T
Q  245 tctttt 250  Q
    ||||||    
T  15832677 tctttt 15832682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 152 - 252
Target Start/End: Original strand, 946383 - 946483
Alignment:
Q  152 gatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctcttttc 251  Q
    ||||||||||||||||||| ||  |||||||||||| ||||| || ||||||| |||||| | | |||||  | || || | ||||||||||||||||||    
T  946383 gatacatagacatccttaggtgataatacaccctttgacacctacccaaaaatctgacacctagtcacgtaaatcccgctctagcacactttctcttttc 946482  T
Q  252 t 252  Q
    |    
T  946483 t 946483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 145 - 249
Target Start/End: Original strand, 12732482 - 12732586
Alignment:
Q  145 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttc 244  Q
    |||| ||||||||||||||| ||||  |||||||| |  | || |||||||||||||||| ||||||||||| | ||||| ||  || ||||||| ||||    
T  12732482 gagtaatgatacatagacattcttaagtggcaatataatcattgacacccacacaaaaatctgacacgtggctatgtggatcccacataagcacattttc 12732581  T
Q  245 tcttt 249  Q
    |||||    
T  12732582 tcttt 12732586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 172 - 225
Target Start/End: Original strand, 26669944 - 26669996
Alignment:
Q  172 tggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggac 225  Q
    ||||||||||||||||| ||||||||||||| | ||||||||||| || |||||    
T  26669944 tggcaatacacccttta-cacccacacaaaattctgacacgtggcaacctggac 26669996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 216
Target Start/End: Complemental strand, 7367714 - 7367671
Alignment:
Q  172 tggcaatacaccctttaacacccacacaaaaatatgacacgtggc 216  Q
    ||||||||||||||||| ||||||||||||| | |||||||||||    
T  7367714 tggcaatacacccttta-cacccacacaaaattctgacacgtggc 7367671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 78; Significance: 2e-36; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 143 - 252
Target Start/End: Complemental strand, 43414683 - 43414574
Alignment:
Q  143 atgagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactt 242  Q
    ||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||| | |||||||| ||| |||| || ||||||||||||||    
T  43414683 atgagttatgatacatagacatccttagatggcaacacaccctttgacacccacacaaaaatctaacacgtggtcacatggatcccgcacaagcacactt 43414584  T
Q  243 tctcttttct 252  Q
    ||||||||||    
T  43414583 tctcttttct 43414574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 145 - 252
Target Start/End: Complemental strand, 4854963 - 4854856
Alignment:
Q  145 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttc 244  Q
    |||| ||||||||||||||||||||| |||||||||||||||||||||| ||| |||||| ||| | |||||||| ||||||||||||||||||||||||    
T  4854963 gagtaatgatacatagacatccttaggtggcaatacaccctttaacacctacataaaaatctgatatgtggccacatggaccctgcacaagcacactttc 4854864  T
Q  245 tcttttct 252  Q
    ||||||||    
T  4854863 tcttttct 4854856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 144 - 250
Target Start/End: Complemental strand, 15048282 - 15048177
Alignment:
Q  144 tgagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacacttt 243  Q
    ||||||||||||||||||||||||||| |||||||||||||||| ||||| |||||||||| |||||||| ||||| ||||||| |||||||||||||||    
T  15048282 tgagttatgatacatagacatccttaggtggcaatacaccctttgacacc-acacaaaaatctgacacgtagccacatggaccccgcacaagcacacttt 15048184  T
Q  244 ctctttt 250  Q
    |||||||    
T  15048183 ctctttt 15048177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 143 - 252
Target Start/End: Original strand, 15197331 - 15197440
Alignment:
Q  143 atgagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactt 242  Q
    |||||| ||||||||||||||  ||||| |||||||||||||||| |||||||||||||||| |||||||| | ||||||||||| ||||||||||||||    
T  15197331 atgagtaatgatacatagacactcttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 15197430  T
Q  243 tctcttttct 252  Q
    ||||||||||    
T  15197431 tctcttttct 15197440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 145 - 252
Target Start/End: Original strand, 12831047 - 12831154
Alignment:
Q  145 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttc 244  Q
    |||| |||||||||||||| |||||| || ||||||||||||| |||||||||||||||| |||||||| | ||||||||||| ||||||||||||||||    
T  12831047 gagtaatgatacatagacacccttaggtgacaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 12831146  T
Q  245 tcttttct 252  Q
    ||||||||    
T  12831147 tcttttct 12831154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 143 - 252
Target Start/End: Complemental strand, 504223 - 504114
Alignment:
Q  143 atgagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactt 242  Q
    |||||| |||||||||||||| |||||| |||||||||||| ||| |||||||||||||||| |||||||| | ||||||||||| |||||||||||| |    
T  504223 atgagtaatgatacatagacacccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacat 504124  T
Q  243 tctcttttct 252  Q
    ||||||||||    
T  504123 tctcttttct 504114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 147 - 252
Target Start/End: Complemental strand, 10621185 - 10621080
Alignment:
Q  147 gttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctc 246  Q
    |||||||||||||||||||||||| ||| |||||||||||| |||||||||||||||| |||||||| ||||| | || || ||||||||||||||||||    
T  10621185 gttatgatacatagacatccttaggtggtaatacaccctttgacacccacacaaaaatctgacacgtagccacatcgatcccgcacaagcacactttctc 10621086  T
Q  247 ttttct 252  Q
    ||||||    
T  10621085 ttttct 10621080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 143 - 252
Target Start/End: Complemental strand, 34012398 - 34012289
Alignment:
Q  143 atgagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactt 242  Q
    |||||| |||||||||||||| |||||| ||| |||||||||||| |||||||||||||||| |||||||| | |||||||| || ||||||||||||||    
T  34012398 atgagtaatgatacatagacacccttaggtggtaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggatcccgcacaagcacactt 34012299  T
Q  243 tctcttttct 252  Q
    ||||||||||    
T  34012298 tctcttttct 34012289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 152 - 252
Target Start/End: Original strand, 14547929 - 14548029
Alignment:
Q  152 gatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctcttttc 251  Q
    |||||||||||| |||||| |||||||||||| ||| |||||||||||||||| |||||||| | ||||||||||| |||||||||||||||||||||||    
T  14547929 gatacatagacacccttaggtggcaatacaccatttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttttc 14548028  T
Q  252 t 252  Q
    |    
T  14548029 t 14548029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 143 - 252
Target Start/End: Complemental strand, 23122699 - 23122590
Alignment:
Q  143 atgagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactt 242  Q
    |||||| |||||||||||||| |||||  |||||||||||| ||| |||||||||||||||| |||||||| | ||||||||||| ||| ||||||||||    
T  23122699 atgagtaatgatacatagacacccttaagtggcaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcataagcacactt 23122600  T
Q  243 tctcttttct 252  Q
    ||||||||||    
T  23122599 tctcttttct 23122590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 145 - 249
Target Start/End: Complemental strand, 10284731 - 10284627
Alignment:
Q  145 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttc 244  Q
    ||||||||||||||||||| |||||  || |||||||| |||| |||||||||||||||| |||||||| | ||||||||||| ||||||||||||||||    
T  10284731 gagttatgatacatagacacccttaagtgacaatacactctttgacacccacacaaaaatttgacacgtagtcacgtggaccccgcacaagcacactttc 10284632  T
Q  245 tcttt 249  Q
    |||||    
T  10284631 tcttt 10284627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 145 - 245
Target Start/End: Original strand, 37038479 - 37038579
Alignment:
Q  145 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttc 244  Q
    |||| |||||||||||||||| |||| |||||||||||||||| |||||||||||||||| |||||||| | |||||||| || ||||||||||||||||    
T  37038479 gagtaatgatacatagacatctttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacactttc 37038578  T
Q  245 t 245  Q
    |    
T  37038579 t 37038579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 144 - 252
Target Start/End: Complemental strand, 40424044 - 40423936
Alignment:
Q  144 tgagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacacttt 243  Q
    ||||| |||||||||||| | |||||| |||||||||||||||| ||| |||||||||||| |||||||| | || |||||||| |||||||||||||||    
T  40424044 tgagtaatgatacatagatacccttaggtggcaatacaccctttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcacacttt 40423945  T
Q  244 ctcttttct 252  Q
    |||||||||    
T  40423944 ctcttttct 40423936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 150 - 249
Target Start/End: Original strand, 5957835 - 5957934
Alignment:
Q  150 atgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctcttt 249  Q
    ||||||||||||||| ||||| |||||||||||||||| |||||||||||||||| |||||||| | |||||||| || |||||| ||||||||||||||    
T  5957835 atgatacatagacattcttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaatcacactttctcttt 5957934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 145 - 252
Target Start/End: Complemental strand, 44507187 - 44507080
Alignment:
Q  145 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttc 244  Q
    |||| |||||||||||||| |||||| ||| ||||||| ||||||||||||||||||||| |||||||| | ||||||||||| | ||||||| ||||||    
T  44507187 gagtaatgatacatagacacccttaggtggtaatacactctttaacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcatactttc 44507088  T
Q  245 tcttttct 252  Q
    ||||||||    
T  44507087 tcttttct 44507080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 145 - 249
Target Start/End: Original strand, 16383377 - 16383481
Alignment:
Q  145 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttc 244  Q
    ||||||||||||||| ||| |||||| ||||||||||||| || |||||||||||||||| ||||| |||||||  ||||||| ||||||| ||||||||    
T  16383377 gagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttc 16383476  T
Q  245 tcttt 249  Q
    |||||    
T  16383477 tcttt 16383481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 145 - 252
Target Start/End: Complemental strand, 1180040 - 1179933
Alignment:
Q  145 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttc 244  Q
    |||| |||||||||||||| |||||| ||| |||||||||||| |||||||||||||||| |||||||| | || |||||  | ||||||||||||||||    
T  1180040 gagtaatgatacatagacacccttaggtggtaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggattccgcacaagcacactttc 1179941  T
Q  245 tcttttct 252  Q
    ||||||||    
T  1179940 tcttttct 1179933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 143 - 249
Target Start/End: Complemental strand, 20075036 - 20074938
Alignment:
Q  143 atgagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactt 242  Q
    |||||| ||||||||||||||||||||| ||||||||||| |||| ||||||||| |||||| |||        ||||||||||||||||||||||||||    
T  20075036 atgagtaatgatacatagacatccttaggtggcaatacactctttgacacccacataaaaatgtga--------cacgtggaccctgcacaagcacactt 20074945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 165 - 249
Target Start/End: Complemental strand, 8841512 - 8841428
Alignment:
Q  165 ccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctcttt 249  Q
    |||||| ||||| |||||||||| |||||||||||||||| | |||||| | ||||||||||| |||||||||||||||||||||    
T  8841512 ccttaggtggcagtacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcacactttctcttt 8841428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 145 - 249
Target Start/End: Complemental strand, 15259029 - 15258925
Alignment:
Q  145 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttc 244  Q
    ||||||||||||||||| |  |||||||||||||||| || |  ||| ||||| |||||| ||||| |||| ||||||||||||||||||||||| ||||    
T  15259029 gagttatgatacatagatactcttagatggcaatacatccctggacatccacataaaaatctgacatgtggtcacgtggaccctgcacaagcacattttc 15258930  T
Q  245 tcttt 249  Q
    |||||    
T  15258929 tcttt 15258925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 145 - 249
Target Start/End: Complemental strand, 16056501 - 16056397
Alignment:
Q  145 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttc 244  Q
    ||||||||||||||| |||||||||  || ||||||| || || |||||||||||||||| ||||| |||||||  ||||||| ||||||| ||||||||    
T  16056501 gagttatgatacataaacatccttatgtgacaatacatcccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttc 16056402  T
Q  245 tcttt 249  Q
    |||||    
T  16056401 tcttt 16056397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 145 - 249
Target Start/End: Complemental strand, 24307893 - 24307789
Alignment:
Q  145 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttc 244  Q
    ||||||||||||||| ||| |||||| |||||||||| || || |||||||||||||||| ||| | |||||||  ||||||| ||||||| ||||||||    
T  24307893 gagttatgatacataaacacccttaggtggcaatacatcccttgacacccacacaaaaatctgatatgtggccatatggaccccgcacaagtacactttc 24307794  T
Q  245 tcttt 249  Q
    |||||    
T  24307793 tcttt 24307789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 145 - 249
Target Start/End: Original strand, 34307216 - 34307320
Alignment:
Q  145 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttc 244  Q
    ||||||||||||||| ||| |||||| ||||||||||||| || |||||||||||||||| ||||| |||| ||  || |||| ||||||| ||||||||    
T  34307216 gagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggacatatgaaccccgcacaagtacactttc 34307315  T
Q  245 tcttt 249  Q
    |||||    
T  34307316 tcttt 34307320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 145 - 249
Target Start/End: Complemental strand, 30479574 - 30479470
Alignment:
Q  145 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttc 244  Q
    ||||||||||||||| ||| |||||| |||||||||||||||| ||| ||||| |||||| ||||| ||||| |  ||||||  ||||||| ||||||||    
T  30479574 gagttatgatacataaacacccttaggtggcaatacaccctttgacatccacataaaaatctgacatgtggctatatggacctcgcacaagtacactttc 30479475  T
Q  245 tcttt 249  Q
    |||||    
T  30479474 tcttt 30479470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 145 - 249
Target Start/End: Original strand, 32032725 - 32032828
Alignment:
Q  145 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttc 244  Q
    ||||||||||||||| ||| |||||| |||||||||| |||| | || |||||||||||| ||||| |||||||  |||| |||||||||| ||||||||    
T  32032725 gagttatgatacataaacacccttaggtggcaatacatccttga-catccacacaaaaatctgacatgtggccatatggatcctgcacaagtacactttc 32032823  T
Q  245 tcttt 249  Q
    |||||    
T  32032824 tcttt 32032828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 145 - 249
Target Start/End: Original strand, 17443825 - 17443929
Alignment:
Q  145 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttc 244  Q
    ||||||||||||||||||| |||||| || ||||||||   ||||||| ||||||||||| ||||| || | || ||||||||  |||||  ||||||||    
T  17443825 gagttatgatacatagacaaccttaggtgacaatacacttcttaacactcacacaaaaatctgacatgtagtcatgtggaccccacacaaagacactttc 17443924  T
Q  245 tcttt 249  Q
    |||||    
T  17443925 tcttt 17443929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 189 - 252
Target Start/End: Original strand, 9122229 - 9122292
Alignment:
Q  189 acacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctcttttct 252  Q
    |||||||||||||||| ||||| || | |||||||| || ||||||||||||||||||||||||    
T  9122229 acacccacacaaaaatctgacatgtagtcacgtggatcccgcacaagcacactttctcttttct 9122292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 145 - 218
Target Start/End: Original strand, 24307629 - 24307702
Alignment:
Q  145 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggcca 218  Q
    ||||||||||||||| ||| |||||| |||||||||| || || |||||||||||||||| ||| | |||||||    
T  24307629 gagttatgatacataaacacccttaggtggcaatacatccattgacacccacacaaaaatctgatatgtggcca 24307702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 172 - 234
Target Start/End: Complemental strand, 29705527 - 29705466
Alignment:
Q  172 tggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaa 234  Q
    ||||||||||||||||| ||||||||||||| | ||||||||||| || ||||||| ||||||    
T  29705527 tggcaatacacccttta-cacccacacaaaattctgacacgtggcaacttggaccccgcacaa 29705466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 143 - 249
Target Start/End: Original strand, 38229427 - 38229532
Alignment:
Q  143 atgagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactt 242  Q
    ||||||||||||||||  |||  ||||| ||||||||| | |  | |||||||||||||||| ||||| |||| ||||||||  ||| ||||||||| ||    
T  38229427 atgagttatgatacatgaacactcttaggtggcaatacgctc-ctgacacccacacaaaaatctgacatgtggtcacgtggattctgtacaagcacattt 38229525  T
Q  243 tctcttt 249  Q
    |||||||    
T  38229526 tctcttt 38229532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 145 - 249
Target Start/End: Original strand, 42221515 - 42221619
Alignment:
Q  145 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttc 244  Q
    |||| |||||||||| |||||||||| || |||||||  | |  |||||||||||||||| ||||||||   ||  |||||||   ||||||||||||||    
T  42221515 gagtaatgatacatatacatccttaggtgacaatacattcctggacacccacacaaaaatctgacacgtaatcatatggaccccatacaagcacactttc 42221614  T
Q  245 tcttt 249  Q
    |||||    
T  42221615 tcttt 42221619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 227
Target Start/End: Complemental strand, 14055692 - 14055610
Alignment:
Q  145 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccc 227  Q
    |||||||||||||| |||| |||||| || |||||||| | || ||| |||||||||||| | ||| || | |||||||||||    
T  14055692 gagttatgatacattgacacccttaggtgacaatacactccttgacatccacacaaaaatcttacatgtagtcacgtggaccc 14055610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 216
Target Start/End: Complemental strand, 2547161 - 2547118
Alignment:
Q  172 tggcaatacaccctttaacacccacacaaaaatatgacacgtggc 216  Q
    ||||||||||||||||| ||||||||||||| | |||||||||||    
T  2547161 tggcaatacacccttta-cacccacacaaaattctgacacgtggc 2547118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 216
Target Start/End: Original strand, 42197370 - 42197413
Alignment:
Q  172 tggcaatacaccctttaacacccacacaaaaatatgacacgtggc 216  Q
    ||||||||||||||||| ||||||||||||| | |||||||||||    
T  42197370 tggcaatacacccttta-cacccacacaaaattttgacacgtggc 42197413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 77; Significance: 8e-36; HSPs: 39)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 145 - 249
Target Start/End: Complemental strand, 50052528 - 50052424
Alignment:
Q  145 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttc 244  Q
    |||| ||||||||||||||||||||| |||||||||||||||| |||||||||||||||| |||||||| | ||||||||||| ||||||||||||||||    
T  50052528 gagtaatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 50052429  T
Q  245 tcttt 249  Q
    |||||    
T  50052428 tcttt 50052424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 144 - 252
Target Start/End: Complemental strand, 11511563 - 11511455
Alignment:
Q  144 tgagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacacttt 243  Q
    ||||| |||||||||||||| |||||| |||||||||||||||| ||||||||| |||||| |||||||| | ||||||||||| |||||||||||||||    
T  11511563 tgagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 11511464  T
Q  244 ctcttttct 252  Q
    |||||||||    
T  11511463 ctcttttct 11511455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 144 - 252
Target Start/End: Original strand, 31910191 - 31910299
Alignment:
Q  144 tgagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacacttt 243  Q
    ||||||||||||||||||||||||||| || |||||||| |||| |||||||||||||||| |||||| | ||||| ||||||| |||||||||||||||    
T  31910191 tgagttatgatacatagacatccttaggtgacaatacactctttgacacccacacaaaaatctgacacatagccacatggaccccgcacaagcacacttt 31910290  T
Q  244 ctcttttct 252  Q
    |||||||||    
T  31910291 ctcttttct 31910299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 145 - 252
Target Start/End: Complemental strand, 48183149 - 48183042
Alignment:
Q  145 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttc 244  Q
    |||| |||||||||||||| |||||  |||||||||||||||| |||||||||||||||| |||||||| | ||||||||||| ||||||||||||||||    
T  48183149 gagtaatgatacatagacacccttacgtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 48183050  T
Q  245 tcttttct 252  Q
    ||||||||    
T  48183049 tcttttct 48183042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 144 - 252
Target Start/End: Original strand, 6034043 - 6034151
Alignment:
Q  144 tgagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacacttt 243  Q
    ||||| |||||||||||||| |||||| |||||||||||||||| |||||||||||||||| ||||| || | |||||||| || |||||||||||||||    
T  6034043 tgagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacatgtagtcacgtggatcccgcacaagcacacttt 6034142  T
Q  244 ctcttttct 252  Q
    |||||||||    
T  6034143 ctcttttct 6034151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 145 - 249
Target Start/End: Original strand, 55475191 - 55475295
Alignment:
Q  145 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttc 244  Q
    ||||||||||||||| |||||||||| |||||||||||||||| |||||||||||||||| ||||| |||||||  ||||||||||| ||| ||||||||    
T  55475191 gagttatgatacataaacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacatgtggccatatggaccctgcataagtacactttc 55475290  T
Q  245 tcttt 249  Q
    |||||    
T  55475291 tcttt 55475295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 145 - 252
Target Start/End: Complemental strand, 480547 - 480440
Alignment:
Q  145 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttc 244  Q
    |||| |||||||||||||| |||||| || ||||||||||||| |||||||||||||||| |||||||| | ||||||||||| | ||||||||||||||    
T  480547 gagtaatgatacatagacacccttaggtgacaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcacactttc 480448  T
Q  245 tcttttct 252  Q
    ||||||||    
T  480447 tcttttct 480440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 145 - 252
Target Start/End: Complemental strand, 29234345 - 29234238
Alignment:
Q  145 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttc 244  Q
    |||| |||||||||||||| ||||||||||||||||||||||| | |||  ||||||||| |||||||| | ||||||||||| ||||||||||||||||    
T  29234345 gagtaatgatacatagacacccttagatggcaatacaccctttgataccttcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 29234246  T
Q  245 tcttttct 252  Q
    ||||||||    
T  29234245 tcttttct 29234238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 145 - 252
Target Start/End: Original strand, 41236347 - 41236454
Alignment:
Q  145 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttc 244  Q
    |||| |||||||||||||| |||||| |||||||||||| ||| ||| |||||||||||| |||||||| | ||||||||||| ||||||||||||||||    
T  41236347 gagtaatgatacatagacacccttaggtggcaatacaccttttgacatccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 41236446  T
Q  245 tcttttct 252  Q
    ||||||||    
T  41236447 tcttttct 41236454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 145 - 252
Target Start/End: Complemental strand, 42044467 - 42044360
Alignment:
Q  145 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttc 244  Q
    |||| |||||||||||||| |||||| |||||||||| ||||  |||||||||||||||| |||||||| | ||||||||||| ||||||||||||||||    
T  42044467 gagtaatgatacatagacacccttaggtggcaatacatccttgtacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 42044368  T
Q  245 tcttttct 252  Q
    ||||||||    
T  42044367 tcttttct 42044360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 143 - 252
Target Start/End: Original strand, 40574777 - 40574886
Alignment:
Q  143 atgagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactt 242  Q
    |||||||||||||||||||||||||||| ||| |||||||||||| |||||||||||||||| |||||||  || || |||| || | ||||||||||||    
T  40574777 atgagttatgatacatagacatccttaggtggtaatacaccctttgacacccacacaaaaatctgacacgctgctacatggatcccgaacaagcacactt 40574876  T
Q  243 tctcttttct 252  Q
    ||||||||||    
T  40574877 tctcttttct 40574886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 145 - 252
Target Start/End: Complemental strand, 24995207 - 24995100
Alignment:
Q  145 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttc 244  Q
    |||| |||||| || |||| ||||||||||||||||||||||| ||||||||| |||||| |||||||| | ||||||||||| ||||||||||| ||||    
T  24995207 gagtaatgatatatggacacccttagatggcaatacaccctttgacacccacataaaaatttgacacgtagtcacgtggaccccgcacaagcacattttc 24995108  T
Q  245 tcttttct 252  Q
    ||||||||    
T  24995107 tcttttct 24995100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 144 - 245
Target Start/End: Complemental strand, 50526272 - 50526171
Alignment:
Q  144 tgagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacacttt 243  Q
    ||||| |||||||||||||||| |||| |||||||||||||||| |||||||||||||||| |||||||||| ||||||||  | |||||||||| ||||    
T  50526272 tgagtaatgatacatagacatctttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtggtcacgtggattccgcacaagcacgcttt 50526173  T
Q  244 ct 245  Q
    ||    
T  50526172 ct 50526171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 144 - 252
Target Start/End: Complemental strand, 54473634 - 54473526
Alignment:
Q  144 tgagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacacttt 243  Q
    ||||| |||||||||||||| |||||| || ||||||||| ||| |||||||||||||||| | |||||| | ||||||||||| |||||||||||||||    
T  54473634 tgagtaatgatacatagacacccttaggtgacaatacaccatttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcacacttt 54473535  T
Q  244 ctcttttct 252  Q
     ||||||||    
T  54473534 atcttttct 54473526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 143 - 249
Target Start/End: Original strand, 3481652 - 3481758
Alignment:
Q  143 atgagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactt 242  Q
    |||||| |||||||||||||| | |||| ||||||||||| |||| |||||||||||||||| |||||| | | |||||||||||  |||||||||||||    
T  3481652 atgagtaatgatacatagacacctttaggtggcaatacactctttgacacccacacaaaaatctgacacatagtcacgtggaccccacacaagcacactt 3481751  T
Q  243 tctcttt 249  Q
    |||||||    
T  3481752 tctcttt 3481758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 145 - 249
Target Start/End: Complemental strand, 19670816 - 19670712
Alignment:
Q  145 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttc 244  Q
    ||||||||||||||| ||| |||||| ||||||||||||| || |||| ||||||||||| ||||| |||||||  ||||||| ||||||| ||||||||    
T  19670816 gagttatgatacataaacacccttaggtggcaatacaccccttgacactcacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttc 19670717  T
Q  245 tcttt 249  Q
    |||||    
T  19670716 tcttt 19670712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 145 - 249
Target Start/End: Original strand, 29239886 - 29239990
Alignment:
Q  145 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttc 244  Q
    |||| |||||||||||||| |||||| |||||||||||| ||| ||| |||||||||||| | |||||| | |||||||||||  |||||||||||||||    
T  29239886 gagtaatgatacatagacacccttaggtggcaatacaccatttgacatccacacaaaaatctaacacgtagtcacgtggaccccacacaagcacactttc 29239985  T
Q  245 tcttt 249  Q
    |||||    
T  29239986 tcttt 29239990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 145 - 249
Target Start/End: Original strand, 32766958 - 32767062
Alignment:
Q  145 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttc 244  Q
    ||||||||||||||| |||  ||||| ||||||||||||| || ||||||| |||||||| ||||| |||||||  ||||||||||||||| ||||||||    
T  32766958 gagttatgatacataaacactcttaggtggcaatacaccccttgacacccatacaaaaatctgacatgtggccatatggaccctgcacaagtacactttc 32767057  T
Q  245 tcttt 249  Q
    |||||    
T  32767058 tcttt 32767062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 145 - 250
Target Start/End: Original strand, 23608235 - 23608340
Alignment:
Q  145 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttc 244  Q
    |||| |||||| ||||||| ||||||||| ||||||||| ||| |||||||||||||||| |||||||| | |||||| || |  |||||||||||||||    
T  23608235 gagtaatgatatatagacacccttagatgacaatacaccatttgacacccacacaaaaatctgacacgtagtcacgtgaactccacacaagcacactttc 23608334  T
Q  245 tctttt 250  Q
    ||||||    
T  23608335 tctttt 23608340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 145 - 249
Target Start/End: Original strand, 47986208 - 47986312
Alignment:
Q  145 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttc 244  Q
    ||||||||||||||| ||| |||||| |||||||||| || || ||| |||||||||||| ||||| |||||||  ||||||| ||||||| ||||||||    
T  47986208 gagttatgatacataaacacccttaggtggcaatacatcccttgacatccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttc 47986307  T
Q  245 tcttt 249  Q
    |||||    
T  47986308 tcttt 47986312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 183 - 252
Target Start/End: Original strand, 41823920 - 41823989
Alignment:
Q  183 cctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctcttttct 252  Q
    |||||||||||||||||||||| |||||||| | ||| ||||||| ||||||||||||||||||||||||    
T  41823920 cctttaacacccacacaaaaatctgacacgtagtcacatggaccccgcacaagcacactttctcttttct 41823989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 145 - 249
Target Start/End: Complemental strand, 8343263 - 8343159
Alignment:
Q  145 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttc 244  Q
    ||||||||||||||| |||||||||| |||||||||| ||||| ||||| ||| |||||| ||||| |||||||  ||||||| ||| ||| | ||||||    
T  8343263 gagttatgatacataaacatccttaggtggcaatacatcctttgacacctacataaaaatctgacatgtggccatatggaccccgcataagtatactttc 8343164  T
Q  245 tcttt 249  Q
    |||||    
T  8343163 tcttt 8343159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 165 - 249
Target Start/End: Complemental strand, 17983823 - 17983739
Alignment:
Q  165 ccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctcttt 249  Q
    |||||| ||||||||||||| || |||||||||||||||| ||||| |||||||  ||||||| ||||||| |||||||||||||    
T  17983823 ccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttctcttt 17983739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 145 - 249
Target Start/End: Complemental strand, 29548059 - 29547955
Alignment:
Q  145 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttc 244  Q
    ||||||||||||||| |||||||||| |||||||||| || || |||||||||||||||| ||||| |||||||  |||| || ||| ||| |||||||     
T  29548059 gagttatgatacataaacatccttaggtggcaatacatcccttgacacccacacaaaaatctgacatgtggccatatggatcccgcataagtacactttt 29547960  T
Q  245 tcttt 249  Q
    |||||    
T  29547959 tcttt 29547955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 145 - 249
Target Start/End: Original strand, 29977885 - 29977989
Alignment:
Q  145 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttc 244  Q
    |||| |||||||||| | | || ||| ||||||||||||| ||||||||||||||||||| |||||||| | ||  |||||||  |||||||||||||||    
T  29977885 gagtaatgatacatacagaaccataggtggcaatacaccccttaacacccacacaaaaatctgacacgtagtcatatggaccccacacaagcacactttc 29977984  T
Q  245 tcttt 249  Q
    |||||    
T  29977985 tcttt 29977989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 145 - 249
Target Start/End: Complemental strand, 48647826 - 48647722
Alignment:
Q  145 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttc 244  Q
    ||||||||| ||||| |||||||||| |  |||||||||  |||||||||||| |||||| | |||||||| ||||||||| | ||||||||||| ||||    
T  48647826 gagttatgacacataaacatccttaggtaacaatacacctcttaacacccacataaaaatctaacacgtggtcacgtggactccgcacaagcacaatttc 48647727  T
Q  245 tcttt 249  Q
    |||||    
T  48647726 tcttt 48647722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 149 - 252
Target Start/End: Complemental strand, 53352661 - 53352559
Alignment:
Q  149 tatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctctt 248  Q
    ||||||||||||||| |||||| || |||||||  |||||||||| |||||||||| |||||||| |  | |||||||| ||||||||| ||||||||||    
T  53352661 tatgatacatagacacccttaggtg-caatacattctttaacacctacacaaaaatctgacacgtagttaagtggaccccgcacaagcatactttctctt 53352563  T
Q  249 ttct 252  Q
    ||||    
T  53352562 ttct 53352559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 145 - 249
Target Start/End: Complemental strand, 50813992 - 50813888
Alignment:
Q  145 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttc 244  Q
    ||||||||||||||| |||  ||||| ||| ||||||||| || |||||||||||||||| ||||| |||| ||  || |||| ||||||| ||||||||    
T  50813992 gagttatgatacataaacactcttaggtggtaatacaccccttgacacccacacaaaaatctgacatgtggtcatatgaaccccgcacaagtacactttc 50813893  T
Q  245 tcttt 249  Q
    |||||    
T  50813892 tcttt 50813888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 145 - 249
Target Start/End: Complemental strand, 55079814 - 55079709
Alignment:
Q  145 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtgga-ccctgcacaagcacacttt 243  Q
    ||||||||||||||| ||| |||||| ||||||||||||  || ||||||| |||||||| ||||| |||||||  |||| |||  |||||| |||||||    
T  55079814 gagttatgatacataaacacccttaggtggcaatacacctcttgacacccatacaaaaatctgacatgtggccatatggacccccacacaagtacacttt 55079715  T
Q  244 ctcttt 249  Q
    ||||||    
T  55079714 ctcttt 55079709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 145 - 215
Target Start/End: Original strand, 47104544 - 47104614
Alignment:
Q  145 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtgg 215  Q
    |||| |||||| |||||||| |||||||| |||||||| || | |||||||||||||||| ||||||||||    
T  47104544 gagtaatgatatatagacattcttagatgacaatacactctctgacacccacacaaaaatttgacacgtgg 47104614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 145 - 246
Target Start/End: Complemental strand, 28480368 - 28480267
Alignment:
Q  145 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttc 244  Q
    ||||||| ||||||||||| |||||| || ||||||||   ||||||| ||||||||||| ||||| || | || ||||||||  ||||| |||||||||    
T  28480368 gagttataatacatagacaaccttaggtgacaatacacttcttaacactcacacaaaaatctgacatgtagtcatgtggaccccacacaaacacactttc 28480269  T
Q  245 tc 246  Q
    ||    
T  28480268 tc 28480267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 145 - 246
Target Start/End: Complemental strand, 28481243 - 28481142
Alignment:
Q  145 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttc 244  Q
    ||||||| ||||||||||| |||||| || ||||||||   ||||||| ||||||||||| ||||| || | || ||||||||  ||||| |||||||||    
T  28481243 gagttataatacatagacaaccttaggtgacaatacacttcttaacactcacacaaaaatctgacatgtagtcatgtggaccccacacaaacacactttc 28481144  T
Q  245 tc 246  Q
    ||    
T  28481143 tc 28481142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 145 - 246
Target Start/End: Complemental strand, 28482118 - 28482017
Alignment:
Q  145 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttc 244  Q
    ||||||| ||||||||||| |||||| || ||||||||   ||||||| ||||||||||| ||||| || | || ||||||||  ||||| |||||||||    
T  28482118 gagttataatacatagacaaccttaggtgacaatacacttcttaacactcacacaaaaatctgacatgtagtcatgtggaccccacacaaacacactttc 28482019  T
Q  245 tc 246  Q
    ||    
T  28482018 tc 28482017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 153 - 249
Target Start/End: Complemental strand, 29589831 - 29589736
Alignment:
Q  153 atacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctcttt 249  Q
    ||||||| ||| |||||| || |||||||||| || |||||||||||||||| ||| | |||||||  |||||||  |||||| |||||||||||||    
T  29589831 atacataaacacccttagttg-caatacaccccttgacacccacacaaaaatctgatatgtggccatatggaccccacacaagtacactttctcttt 29589736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 149 - 215
Target Start/End: Original strand, 18769113 - 18769179
Alignment:
Q  149 tatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtgg 215  Q
    ||||||||||| |||||||||  |  | ||||||||| |||||||||||||||||| ||||||||||    
T  18769113 tatgatacataaacatccttatgtacccatacaccctctaacacccacacaaaaatctgacacgtgg 18769179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 143 - 249
Target Start/End: Complemental strand, 18924597 - 18924491
Alignment:
Q  143 atgagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactt 242  Q
    |||||||||||| |||| | | |||||| ||||||||||||| || | | |||||||||||| ||||| ||||| |  || || | ||||||| ||||||    
T  18924597 atgagttatgatccataaatacccttaggtggcaatacaccccttgatatccacacaaaaatctgacatgtggcaatatgaactccgcacaagtacactt 18924498  T
Q  243 tctcttt 249  Q
    |||||||    
T  18924497 tctcttt 18924491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 144 - 249
Target Start/End: Original strand, 29535376 - 29535480
Alignment:
Q  144 tgagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacacttt 243  Q
    ||||||||||||||||||||  ||||| || ||||||| |  ||   | ||||||||||||||| ||| |||||||||||| ||  ||||| ||||||||    
T  29535376 tgagttatgatacatagacaatcttaggtgacaatacatctcttggtatccacacaaaaatatg-cacatggccacgtggatcccacacaaacacacttt 29535474  T
Q  244 ctcttt 249  Q
    ||||||    
T  29535475 ctcttt 29535480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 171 - 234
Target Start/End: Complemental strand, 33703307 - 33703245
Alignment:
Q  171 atggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaa 234  Q
    |||||||||||||||||| ||||||||||||| | ||||||||||| || |||| || ||||||    
T  33703307 atggcaatacacccttta-cacccacacaaaattctgacacgtggcaacttggatcccgcacaa 33703245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 249
Target Start/End: Complemental strand, 44536845 - 44536742
Alignment:
Q  145 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttc 244  Q
    ||||||||||||||| |||   |||| ||||||||||||| || ||| |||||||||||| ||||| |||| ||  | |||||  || ||| ||||||||    
T  44536845 gagttatgatacataaacacttttaggtggcaatacaccc-ttgacatccacacaaaaatctgacatgtggtcatatagaccccacataagtacactttc 44536747  T
Q  245 tcttt 249  Q
    |||||    
T  44536746 tcttt 44536742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 76; Significance: 3e-35; HSPs: 39)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 141 - 252
Target Start/End: Original strand, 19329838 - 19329949
Alignment:
Q  141 acatgagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacac 240  Q
    |||||||| ||||||||||||||||||||| |||||||||||| ||| |||||||||||||||| ||||||||   ||||||||||| ||||||||||||    
T  19329838 acatgagtaatgatacatagacatccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcacac 19329937  T
Q  241 tttctcttttct 252  Q
    ||||||||||||    
T  19329938 tttctcttttct 19329949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 146 - 252
Target Start/End: Original strand, 35522877 - 35522983
Alignment:
Q  146 agttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttct 245  Q
    ||||||||||||||||||||||||  |||||||||||| |||||||||||||||||||| |||||||||||||  |||| || |||||||||||||||||    
T  35522877 agttatgatacatagacatccttaagtggcaatacaccatttaacacccacacaaaaatctgacacgtggccatatggatcccgcacaagcacactttct 35522976  T
Q  246 cttttct 252  Q
    |||||||    
T  35522977 cttttct 35522983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 145 - 239
Target Start/End: Complemental strand, 46374902 - 46374808
Alignment:
Q  145 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcaca 239  Q
    |||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||| |||||||||||||| ||||||| |||||||||||    
T  46374902 gagttatgatacatagacatccttaggtggcaacacaccctttaacacccacacaaaaatctgacacgtggccacatggaccccgcacaagcaca 46374808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 145 - 252
Target Start/End: Original strand, 3434562 - 3434669
Alignment:
Q  145 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttc 244  Q
    |||| ||||||||||||||||||||| |||||||||||||||| |||||||||||||||  |||||||| | |||||||| || ||||||||||||||||    
T  3434562 gagtaatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaaactgacacgtagtcacgtggatcccgcacaagcacactttc 3434661  T
Q  245 tcttttct 252  Q
    ||||||||    
T  3434662 tcttttct 3434669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 145 - 252
Target Start/End: Original strand, 7389389 - 7389496
Alignment:
Q  145 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttc 244  Q
    |||| |||||||||||||| |||||| ||||||||||| |||| |||||||||||||||| |||||||| | ||||||||||| ||||||||||||||||    
T  7389389 gagtaatgatacatagacacccttaggtggcaatacactctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 7389488  T
Q  245 tcttttct 252  Q
    ||||||||    
T  7389489 tcttttct 7389496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 144 - 252
Target Start/End: Original strand, 38267039 - 38267147
Alignment:
Q  144 tgagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacacttt 243  Q
    ||||| |||||||||||||| |||||  || ||||||||||||| |||||||||||||||| |||||||| | ||||||||||| |||||||||||||||    
T  38267039 tgagtaatgatacatagacacccttatgtgacaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 38267138  T
Q  244 ctcttttct 252  Q
    |||||||||    
T  38267139 ctcttttct 38267147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 145 - 252
Target Start/End: Complemental strand, 8080483 - 8080376
Alignment:
Q  145 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttc 244  Q
    |||| |||||||||||||| |||||| |||||||||||||||| ||||| ||| |||||| |||||||| | ||||||||||| ||||||||||||||||    
T  8080483 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacctacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 8080384  T
Q  245 tcttttct 252  Q
    ||||||||    
T  8080383 tcttttct 8080376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 145 - 252
Target Start/End: Complemental strand, 36362013 - 36361906
Alignment:
Q  145 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttc 244  Q
    |||| |||||||||||||| |||||| |||||||||| ||||| |||||||||||||||| |||||||| | |||||||||||  |||||||||||||||    
T  36362013 gagtaatgatacatagacacccttaggtggcaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggaccccacacaagcacactttc 36361914  T
Q  245 tcttttct 252  Q
    ||||||||    
T  36361913 tcttttct 36361906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 145 - 252
Target Start/End: Original strand, 38837217 - 38837324
Alignment:
Q  145 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttc 244  Q
    |||| |||||||||||||| |||||| |||||||||||||||  ||||| |||||||||| |||||||| | ||||||||||| ||||||||||||||||    
T  38837217 gagtaatgatacatagacacccttaggtggcaatacacccttgtacacctacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 38837316  T
Q  245 tcttttct 252  Q
    ||||||||    
T  38837317 tcttttct 38837324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 145 - 250
Target Start/End: Complemental strand, 4999614 - 4999509
Alignment:
Q  145 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttc 244  Q
    |||| |||||||||||||| ||||||||||||||||||| ||| |||||||||||||||| ||| |||| | ||||||||||| |||||| |||||||||    
T  4999614 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgatacgtagtcacgtggaccccgcacaaacacactttc 4999515  T
Q  245 tctttt 250  Q
    ||||||    
T  4999514 tctttt 4999509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 143 - 248
Target Start/End: Original strand, 21234399 - 21234504
Alignment:
Q  143 atgagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactt 242  Q
    |||||||||||||||||||||||||||| || ||||||||||||| |||| ||||||||||| |||||||| ||||| || |||| ||||||||||| ||    
T  21234399 atgagttatgatacatagacatccttaggtgacaatacaccctttgacactcacacaaaaatttgacacgtagccacatgtaccccgcacaagcacattt 21234498  T
Q  243 tctctt 248  Q
    ||||||    
T  21234499 tctctt 21234504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 143 - 252
Target Start/End: Original strand, 35137531 - 35137640
Alignment:
Q  143 atgagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactt 242  Q
    |||||| |||||| ||||||| |||||| |||||||||||||||| |||||||||||||||| | |||||| | ||||||||||| |||||| |||||||    
T  35137531 atgagtaatgataaatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaaacacactt 35137630  T
Q  243 tctcttttct 252  Q
    ||||||||||    
T  35137631 tctcttttct 35137640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 145 - 252
Target Start/End: Complemental strand, 19436287 - 19436180
Alignment:
Q  145 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttc 244  Q
    |||| ||||||||||||||||||||| || ||||||||| ||| |||||||||||||||| |||||||| | |||||||| || ||| ||||||||||||    
T  19436287 gagtaatgatacatagacatccttaggtgacaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcataagcacactttc 19436188  T
Q  245 tcttttct 252  Q
    ||||||||    
T  19436187 tcttttct 19436180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 143 - 252
Target Start/End: Original strand, 31735882 - 31735984
Alignment:
Q  143 atgagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactt 242  Q
    |||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||       |||||||||||| |||| || ||||||||||||||    
T  31735882 atgagttatgatacatagacatccttaggtggcaatacactctttaacacccacacaa-------acacgtggccacatggatcccgcacaagcacactt 31735974  T
Q  243 tctcttttct 252  Q
    ||||||||||    
T  31735975 tctcttttct 31735984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 145 - 252
Target Start/End: Original strand, 36362026 - 36362133
Alignment:
Q  145 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttc 244  Q
    |||| |||||||||||||| |||||| ||| |||||| ||||| |||||||||||||||| |||||||| | |||||||||||  |||||||||||||||    
T  36362026 gagtaatgatacatagacacccttaggtggtaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggaccccacacaagcacactttc 36362125  T
Q  245 tcttttct 252  Q
    ||||||||    
T  36362126 tcttttct 36362133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 150 - 252
Target Start/End: Original strand, 3784000 - 3784102
Alignment:
Q  150 atgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctcttt 249  Q
    |||||||||||||| |||||| |||||||||| | ||| |||||||||||||||| |||||||| | |||||||| || |||||||||||||||||||||    
T  3784000 atgatacatagacacccttaggtggcaatacatcttttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacactttctcttt 3784099  T
Q  250 tct 252  Q
    |||    
T  3784100 tct 3784102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 150 - 252
Target Start/End: Complemental strand, 32951588 - 32951486
Alignment:
Q  150 atgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctcttt 249  Q
    ||||||||||||||  |||||||| ||||||| ||||||||| |||||||||||| | |||||| | ||||||||||| |||||||||||||||||||||    
T  32951588 atgatacatagacactcttagatgacaatacatcctttaacatccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcacactttctcttt 32951489  T
Q  250 tct 252  Q
    |||    
T  32951488 tct 32951486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 145 - 252
Target Start/End: Original strand, 26296644 - 26296751
Alignment:
Q  145 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttc 244  Q
    |||||||||||||||||||||||||| || ||||| ||||||||||| ||||| |||||| ||| |||||||||  ||||||| |||||||| || ||||    
T  26296644 gagttatgatacatagacatccttaggtgacaatataccctttaacatccacataaaaatctgatacgtggccatatggaccccgcacaagcgcattttc 26296743  T
Q  245 tcttttct 252  Q
    ||||||||    
T  26296744 tcttttct 26296751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 145 - 252
Target Start/End: Complemental strand, 46033901 - 46033794
Alignment:
Q  145 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttc 244  Q
    ||||||||||||||||| || ||||| |||||||||||||||||||||||||| |||||| |||||||||| ||| || || | ||||||||| | ||||    
T  46033901 gagttatgatacatagatattcttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatgaactccgcacaagcatattttc 46033802  T
Q  245 tcttttct 252  Q
    ||||||||    
T  46033801 tcttttct 46033794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 145 - 249
Target Start/End: Original strand, 22343361 - 22343465
Alignment:
Q  145 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttc 244  Q
    ||||||||||||||| ||| |||||| ||||||||||||| || |||||||||||||||| ||||| ||| |||  ||||||| ||||||| ||||||||    
T  22343361 gagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtgaccatatggaccccgcacaagtacactttc 22343460  T
Q  245 tcttt 249  Q
    |||||    
T  22343461 tcttt 22343465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 145 - 249
Target Start/End: Complemental strand, 35468955 - 35468851
Alignment:
Q  145 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttc 244  Q
    |||| |||||||||||||||||||||||||||||||| | ||| ||||||||| |||||| | | | ||| ||| ||||||||||||||| |||||||||    
T  35468955 gagtaatgatacatagacatccttagatggcaatacatcatttgacacccacataaaaatctaatatgtgaccatgtggaccctgcacaaacacactttc 35468856  T
Q  245 tcttt 249  Q
    |||||    
T  35468855 tcttt 35468851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 145 - 249
Target Start/End: Original strand, 36208173 - 36208277
Alignment:
Q  145 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttc 244  Q
    ||||||||||||||||||| |||||| ||| ||||||  | || |||||||||||||||  ||||| |||| ||||||||||||||||||||||| ||||    
T  36208173 gagttatgatacatagacacccttaggtggtaatacattcattgacacccacacaaaaagctgacatgtggtcacgtggaccctgcacaagcacattttc 36208272  T
Q  245 tcttt 249  Q
    |||||    
T  36208273 tcttt 36208277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 145 - 249
Target Start/End: Original strand, 41915741 - 41915845
Alignment:
Q  145 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttc 244  Q
    ||||||||||||||| ||| |||||| ||||||||||||| || ||||| |||||||||| ||||| |||||||  ||||||| ||||||| ||||||||    
T  41915741 gagttatgatacataaacacccttaggtggcaatacaccccttgacacctacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttc 41915840  T
Q  245 tcttt 249  Q
    |||||    
T  41915841 tcttt 41915845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 145 - 252
Target Start/End: Original strand, 40957707 - 40957814
Alignment:
Q  145 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttc 244  Q
    |||| ||||||||||||||  ||||| ||||||||||| |||| | |||||||||||||| |||||||| | |||||||| || | ||||||||||||||    
T  40957707 gagtaatgatacatagacactcttaggtggcaatacactctttgatacccacacaaaaatctgacacgtagtcacgtggatcccgtacaagcacactttc 40957806  T
Q  245 tcttttct 252  Q
    ||||||||    
T  40957807 tcttttct 40957814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 150 - 252
Target Start/End: Original strand, 3694372 - 3694474
Alignment:
Q  150 atgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctcttt 249  Q
    |||||| ||| ||| |||||| || ||||||||| |||||||||||||||||||| |||||||| | || ||||| || |||||||||||||||||||||    
T  3694372 atgatatatacacacccttaggtgacaatacaccttttaacacccacacaaaaatctgacacgtagtcatgtggatcccgcacaagcacactttctcttt 3694471  T
Q  250 tct 252  Q
    |||    
T  3694472 tct 3694474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 144 - 249
Target Start/End: Complemental strand, 32564527 - 32564422
Alignment:
Q  144 tgagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacacttt 243  Q
    |||||||||||||||| |||| ||||| ||||||||||||| || |||||||||||||||| ||||| ||||| |  ||||||| ||||||  |||||||    
T  32564527 tgagttatgatacataaacattcttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggctatatggaccccgcacaaatacacttt 32564428  T
Q  244 ctcttt 249  Q
    ||||||    
T  32564427 ctcttt 32564422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 145 - 249
Target Start/End: Original strand, 18207180 - 18207283
Alignment:
Q  145 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttc 244  Q
    ||||||||||||||||||| |||||| ||||||||||||  || ||||||| |||||||| | |||||||| |||||| ||||  |||||||||||||||    
T  18207180 gagttatgatacatagacaaccttaggtggcaatacacctcttgacacccatacaaaaatctaacacgtgg-cacgtgaaccccacacaagcacactttc 18207278  T
Q  245 tcttt 249  Q
    |||||    
T  18207279 tcttt 18207283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 145 - 249
Target Start/End: Original strand, 38044197 - 38044301
Alignment:
Q  145 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttc 244  Q
    ||||||||||||||| ||| |||||| ||||||||||||| || ||| |||||||||||| ||||| || ||||  ||||||| ||||||| ||||||||    
T  38044197 gagttatgatacataaacacccttaggtggcaatacaccccttgacatccacacaaaaatctgacatgtagccatatggaccccgcacaagtacactttc 38044296  T
Q  245 tcttt 249  Q
    |||||    
T  38044297 tcttt 38044301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 143 - 249
Target Start/End: Original strand, 8238210 - 8238317
Alignment:
Q  143 atgagttatgatacatagacatcct-tagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacact 241  Q
    ||||||||||||||||| ||| ||| ||| |||||||||||||||| |||||||||||||||| ||||| || | ||  ||||||| ||||||| |||||    
T  8238210 atgagttatgatacataaacaccctgtaggtggcaatacaccctttgacacccacacaaaaatctgacatgtagtcatatggaccccgcacaagtacact 8238309  T
Q  242 ttctcttt 249  Q
    ||||||||    
T  8238310 ttctcttt 8238317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 144 - 249
Target Start/End: Complemental strand, 39256024 - 39255920
Alignment:
Q  144 tgagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacacttt 243  Q
    |||||||||||||||||||| |||||| ||||||||||||  || | ||||| |||||||| |||||||||| ||||||||| |  |||||| |||||||    
T  39256024 tgagttatgatacatagacaaccttaggtggcaatacaccacttgatacccatacaaaaatctgacacgtgg-cacgtggactccacacaagaacacttt 39255926  T
Q  244 ctcttt 249  Q
    ||||||    
T  39255925 ctcttt 39255920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 144 - 249
Target Start/End: Original strand, 41423681 - 41423786
Alignment:
Q  144 tgagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacacttt 243  Q
    |||||||||||||||||||||| |||||||| ||||||||  || ||||  |||||||||| ||||| |||| ||||| || || | ||||||| | |||    
T  41423681 tgagttatgatacatagacatcattagatggtaatacacctcttgacacttacacaaaaatctgacatgtggtcacgtagatcccgtacaagcatatttt 41423780  T
Q  244 ctcttt 249  Q
    ||||||    
T  41423781 ctcttt 41423786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 145 - 249
Target Start/End: Complemental strand, 40846213 - 40846109
Alignment:
Q  145 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttc 244  Q
    ||||||||||||||| |||||||||| ||||||||||||| || ||| |||||||||||| | ||| || |  |  ||||||| ||||||  ||||||||    
T  40846213 gagttatgatacataaacatccttaggtggcaatacaccccttgacatccacacaaaaatctaacatgtagttatatggaccccgcacaaatacactttc 40846114  T
Q  245 tcttt 249  Q
    |||||    
T  40846113 tcttt 40846109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 145 - 249
Target Start/End: Complemental strand, 10343663 - 10343559
Alignment:
Q  145 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttc 244  Q
    |||| |||||||||||||| |||||| ||| |||||||   || |||||||||||||||| |||||| ||    ||||||| ||||| | ||||||||||    
T  10343663 gagtaatgatacatagacacccttaggtggaaatacacatcttgacacccacacaaaaatctgacacatgtttccgtggactctgcagacgcacactttc 10343564  T
Q  245 tcttt 249  Q
    |||||    
T  10343563 tcttt 10343559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 145 - 245
Target Start/End: Original strand, 7727906 - 7728006
Alignment:
Q  145 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttc 244  Q
    ||||||||||||||| ||| |||||| ||| ||||||||  || |||  |||| |||||| ||||| |||| ||  ||||||| ||||||| ||||||||    
T  7727906 gagttatgatacataaacacccttaggtggtaatacacctcttgacattcacataaaaatctgacatgtggtcatatggaccccgcacaagtacactttc 7728005  T
Q  245 t 245  Q
    |    
T  7728006 t 7728006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 179 - 247
Target Start/End: Complemental strand, 27744375 - 27744307
Alignment:
Q  179 acaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctct 247  Q
    ||||||||| | |||||||||||||| ||||| ||||||||||||| ||  || ||||||| |||||||    
T  27744375 acaccctttgatacccacacaaaaatctgacatgtggccacgtggatccctcataagcacattttctct 27744307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 150 - 249
Target Start/End: Complemental strand, 2318338 - 2318239
Alignment:
Q  150 atgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctcttt 249  Q
    |||||||||  ||| || ||| |||||| |||||  || |||||||||||||||| ||||  |||| |||||||||||  || ||||| |||||||||||    
T  2318338 atgatacattaacaaccataggtggcaagacacctcttgacacccacacaaaaatctgacgtgtggtcacgtggacccgacataagcatactttctcttt 2318239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 227
Target Start/End: Original strand, 32029752 - 32029806
Alignment:
Q  172 tggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccc 227  Q
    ||||||||||||||||| ||||||||||||| | ||||||||||| || |||||||    
T  32029752 tggcaatacacccttta-cacccacacaaaattctgacacgtggcaacttggaccc 32029806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 249
Target Start/End: Complemental strand, 16374894 - 16374820
Alignment:
Q  175 caatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctcttt 249  Q
    ||||||| || || ||| |||||||||||| |||||||||| |||||||| |   ||||||||||| ||||||||    
T  16374894 caatacatcccttgacatccacacaaaaatctgacacgtggtcacgtggatctcacacaagcacacattctcttt 16374820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 145 - 194
Target Start/End: Original strand, 11044188 - 11044237
Alignment:
Q  145 gagttatgatacatagacatccttagatggcaatacaccctttaacaccc 194  Q
    |||| |||||||||||||| |||||| |||||||||| ||||| ||||||    
T  11044188 gagtaatgatacatagacacccttaggtggcaatacatcctttgacaccc 11044237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0237 (Bit Score: 64; Significance: 4e-28; HSPs: 1)
Name: scaffold0237
Description:

Target: scaffold0237; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 145 - 252
Target Start/End: Original strand, 4029 - 4136
Alignment:
Q  145 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttc 244  Q
    |||| |||||||||||||| | ||||||||||||||||| |||||||||||||||||||| |||||||| |  ||||||| || ||| ||||||||||||    
T  4029 gagtaatgatacatagacacctttagatggcaatacaccttttaacacccacacaaaaatctgacacgtagttacgtggatcccgcataagcacactttc 4128  T
Q  245 tcttttct 252  Q
    ||||||||    
T  4129 tcttttct 4136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1268 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold1268
Description:

Target: scaffold1268; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 143 - 249
Target Start/End: Complemental strand, 1031 - 925
Alignment:
Q  143 atgagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactt 242  Q
    |||||| |||||||||||||||| |||| |||||||||||||||||||| |||||||||||  |||||||| | |||||| | || ||||||||||||||    
T  1031 atgagtaatgatacatagacatctttaggtggcaatacaccctttaacatccacacaaaaaactgacacgtagtcacgtgaatcccgcacaagcacactt 932  T
Q  243 tctcttt 249  Q
    |||||||    
T  931 tctcttt 925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1267 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold1267
Description:

Target: scaffold1267; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 143 - 249
Target Start/End: Complemental strand, 1031 - 925
Alignment:
Q  143 atgagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactt 242  Q
    |||||| |||||||||||||||| |||| |||||||||||||||||||| |||||||||||  |||||||| | |||||| | || ||||||||||||||    
T  1031 atgagtaatgatacatagacatctttaggtggcaatacaccctttaacatccacacaaaaaactgacacgtagtcacgtgaatcccgcacaagcacactt 932  T
Q  243 tctcttt 249  Q
    |||||||    
T  931 tctcttt 925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 145 - 252
Target Start/End: Complemental strand, 10209 - 10102
Alignment:
Q  145 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttc 244  Q
    ||||||||||||||||||| | |||| |||||||||| ||||| ||| ||||| |||||| |||||||| | ||||||||||  | ||||||||||||||    
T  10209 gagttatgatacatagacacctttaggtggcaatacatcctttgacatccacataaaaatctgacacgtagtcacgtggaccgcgtacaagcacactttc 10110  T
Q  245 tcttttct 252  Q
    ||||||||    
T  10109 tcttttct 10102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 144 - 249
Target Start/End: Complemental strand, 8964 - 8859
Alignment:
Q  144 tgagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacacttt 243  Q
    |||||||||||| |||||||||||||  || ||||||||  ||| ||| | |||||||||| |||||| | | |||||||||||  |||||| ||| |||    
T  8964 tgagttatgatatatagacatccttaagtgacaatacactatttgacatctacacaaaaatttgacacatagtcacgtggaccccacacaagtacatttt 8865  T
Q  244 ctcttt 249  Q
    ||||||    
T  8864 ctcttt 8859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0316 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 143 - 249
Target Start/End: Original strand, 17056 - 17158
Alignment:
Q  143 atgagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactt 242  Q
    |||||||||||| |||||||||    || | |||||||| || |  ||| |||||||||||| ||||| |||| ||| ||||||| ||||||||||| ||    
T  17056 atgagttatgattcatagacat----aggttgcaatacatccctcgacatccacacaaaaatctgacatgtggtcacatggaccccgcacaagcacattt 17151  T
Q  243 tctcttt 249  Q
    |||||||    
T  17152 tctcttt 17158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 172 - 249
Target Start/End: Original strand, 152525 - 152602
Alignment:
Q  172 tggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcacactttctcttt 249  Q
    ||||||||||||| || |||||||||||||||| ||||| |||| ||  |||| || ||||||  |||||||||||||    
T  152525 tggcaatacaccccttgacacccacacaaaaatctgacatgtggtcatatggatcccgcacaaatacactttctcttt 152602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 172 - 225
Target Start/End: Complemental strand, 850 - 798
Alignment:
Q  172 tggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggac 225  Q
    ||||||||||||||||| ||||||||||||| | ||||||||||| || |||||    
T  850 tggcaatacacccttta-cacccacacaaaattctgacacgtggcaacctggac 798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University