View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3185_high_19 (Length: 259)

Name: NF3185_high_19
Description: NF3185
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3185_high_19
NF3185_high_19
[»] chr8 (26 HSPs)
chr8 (134-241)||(8015030-8015136)
chr8 (20-120)||(504117-504216)
chr8 (20-118)||(14547929-14548026)
chr8 (20-120)||(12831052-12831151)
chr8 (20-120)||(15197338-15197437)
chr8 (20-120)||(23122593-23122692)
chr8 (20-120)||(34012292-34012391)
chr8 (19-121)||(10284626-10284727)
chr8 (14-120)||(5957835-5957940)
chr8 (14-120)||(37038484-37038589)
chr8 (20-120)||(40423939-40424038)
chr8 (15-121)||(17443829-17443934)
chr8 (67-121)||(24307633-24307687)
chr8 (20-121)||(15048178-15048277)
chr8 (20-121)||(43414577-43414677)
chr8 (20-120)||(1179936-1180035)
chr8 (14-102)||(8841422-8841509)
chr8 (12-120)||(42221520-42221627)
chr8 (19-121)||(16383381-16383482)
chr8 (67-121)||(24307835-24307889)
chr8 (20-121)||(10621083-10621183)
chr8 (20-120)||(44507083-44507182)
chr8 (15-70)||(42354579-42354634)
chr8 (19-121)||(16056396-16056497)
chr8 (19-121)||(34307220-34307321)
chr8 (12-52)||(40467772-40467812)
[»] chr7 (29 HSPs)
chr7 (20-120)||(36361909-36362008)
chr7 (20-120)||(3784000-3784099)
chr7 (20-120)||(36362031-36362130)
chr7 (14-121)||(18207184-18207289)
chr7 (20-120)||(19329847-19329946)
chr7 (20-120)||(7389394-7389493)
chr7 (12-120)||(2318231-2318338)
chr7 (20-120)||(3434567-3434666)
chr7 (14-121)||(39255914-39256019)
chr7 (14-120)||(4999504-4999609)
chr7 (14-95)||(16374814-16374894)
chr7 (20-120)||(8080379-8080478)
chr7 (20-120)||(19436183-19436282)
chr7 (20-120)||(38267045-38267144)
chr7 (14-121)||(36208177-36208283)
chr7 (20-120)||(35137538-35137637)
chr7 (20-120)||(38837222-38837321)
chr7 (20-121)||(35522880-35522980)
chr7 (20-120)||(40957712-40957811)
chr7 (20-120)||(3694372-3694471)
chr7 (20-120)||(32951489-32951588)
chr7 (30-121)||(46374808-46374898)
chr7 (19-121)||(22343365-22343466)
chr7 (19-121)||(41915745-41915846)
chr7 (67-120)||(10343605-10343658)
chr7 (67-120)||(35468897-35468950)
chr7 (76-120)||(11044193-11044237)
chr7 (12-60)||(11044242-11044290)
chr7 (21-121)||(21234405-21234504)
[»] chr6 (17 HSPs)
chr6 (20-120)||(17598559-17598658)
chr6 (20-118)||(32869685-32869782)
chr6 (20-120)||(22880654-22880753)
chr6 (15-120)||(31953021-31953125)
chr6 (20-120)||(11427621-11427722)
chr6 (15-121)||(9379703-9379808)
chr6 (15-120)||(28536479-28536581)
chr6 (20-120)||(6209461-6209560)
chr6 (20-121)||(31976252-31976352)
chr6 (20-94)||(23128123-23128196)
chr6 (19-121)||(15508019-15508120)
chr6 (19-121)||(15990037-15990138)
chr6 (19-121)||(30341355-30341456)
chr6 (20-120)||(29857832-29857931)
chr6 (14-120)||(12732487-12732592)
chr6 (20-113)||(31109396-31109488)
chr6 (68-120)||(22422061-22422113)
[»] chr5 (25 HSPs)
chr5 (14-121)||(35943882-35943988)
chr5 (14-120)||(18520874-18520979)
chr5 (21-118)||(13811659-13811755)
chr5 (20-121)||(28177779-28177879)
chr5 (20-120)||(2740279-2740378)
chr5 (14-120)||(6259991-6260096)
chr5 (20-121)||(6679702-6679802)
chr5 (17-102)||(16327924-16328008)
chr5 (20-120)||(33149634-33149733)
chr5 (20-120)||(35785204-35785303)
chr5 (20-120)||(36732938-36733037)
chr5 (20-120)||(40145412-40145511)
chr5 (20-120)||(42414298-42414397)
chr5 (20-121)||(15409606-15409706)
chr5 (20-121)||(26720520-26720620)
chr5 (20-121)||(26990269-26990369)
chr5 (24-120)||(14831819-14831914)
chr5 (67-121)||(10356638-10356693)
chr5 (19-121)||(2252163-2252264)
chr5 (19-121)||(3921260-3921361)
chr5 (15-120)||(33825315-33825419)
chr5 (67-120)||(36875645-36875698)
chr5 (14-110)||(39557507-39557602)
chr5 (19-121)||(31008992-31009093)
chr5 (67-121)||(39688939-39688993)
[»] chr2 (28 HSPs)
chr2 (14-121)||(17819994-17820100)
chr2 (14-120)||(7465725-7465830)
chr2 (14-120)||(28863460-28863565)
chr2 (20-120)||(10249378-10249477)
chr2 (20-120)||(13438348-13438447)
chr2 (12-120)||(33436088-33436195)
chr2 (20-121)||(40613898-40613998)
chr2 (20-120)||(9058485-9058584)
chr2 (24-120)||(32505648-32505743)
chr2 (20-120)||(40701483-40701582)
chr2 (20-121)||(42257197-42257297)
chr2 (20-120)||(17473025-17473124)
chr2 (20-120)||(28381651-28381750)
chr2 (19-121)||(26891499-26891600)
chr2 (20-120)||(5574484-5574583)
chr2 (20-120)||(19930816-19930915)
chr2 (20-120)||(30915468-30915567)
chr2 (14-120)||(20700820-20700925)
chr2 (19-120)||(27864709-27864809)
chr2 (19-120)||(33436216-33436316)
chr2 (14-120)||(41575142-41575248)
chr2 (19-121)||(38732358-38732459)
chr2 (19-121)||(45097730-45097831)
chr2 (20-121)||(36168840-36168940)
chr2 (24-120)||(4060690-4060785)
chr2 (14-121)||(2533128-2533233)
chr2 (20-121)||(38273138-38273238)
chr2 (12-48)||(17823864-17823900)
[»] chr4 (27 HSPs)
chr4 (14-120)||(50052418-50052523)
chr4 (20-120)||(41236352-41236451)
chr4 (14-120)||(29239891-29239996)
chr4 (15-120)||(29977890-29977994)
chr4 (20-120)||(11511458-11511557)
chr4 (20-120)||(42044363-42044462)
chr4 (20-120)||(48183045-48183144)
chr4 (19-120)||(3481659-3481759)
chr4 (20-120)||(480443-480542)
chr4 (20-120)||(6034049-6034148)
chr4 (14-121)||(29535381-29535486)
chr4 (20-120)||(54473529-54473628)
chr4 (14-120)||(23608240-23608345)
chr4 (14-120)||(50526161-50526266)
chr4 (20-120)||(29234241-29234340)
chr4 (14-117)||(28480258-28480360)
chr4 (14-117)||(28481133-28481235)
chr4 (14-117)||(28482008-28482110)
chr4 (67-121)||(29548001-29548055)
chr4 (20-121)||(31910196-31910296)
chr4 (19-121)||(47986212-47986313)
chr4 (20-120)||(24995103-24995202)
chr4 (19-121)||(55079708-55079810)
chr4 (19-121)||(19670711-19670812)
chr4 (67-121)||(40574783-40574837)
chr4 (67-121)||(55475195-55475249)
chr4 (20-81)||(41823926-41823986)
[»] chr3 (26 HSPs)
chr3 (15-120)||(14623830-14623934)
chr3 (20-121)||(26141528-26141628)
chr3 (20-120)||(17470410-17470509)
chr3 (20-120)||(49607419-49607518)
chr3 (20-120)||(53982016-53982115)
chr3 (14-120)||(25407137-25407243)
chr3 (15-120)||(8956767-8956871)
chr3 (15-120)||(13898046-13898150)
chr3 (15-120)||(35536631-35536735)
chr3 (20-121)||(52629304-52629404)
chr3 (20-120)||(31456694-31456793)
chr3 (20-120)||(33644205-33644304)
chr3 (20-120)||(54868891-54868990)
chr3 (20-121)||(41189760-41189860)
chr3 (14-120)||(8076398-8076503)
chr3 (14-120)||(24699944-24700049)
chr3 (21-120)||(27714888-27714986)
chr3 (14-121)||(33118841-33118947)
chr3 (20-121)||(11347918-11348018)
chr3 (20-121)||(51419356-51419456)
chr3 (12-120)||(30801721-30801828)
chr3 (14-121)||(26754699-26754805)
chr3 (67-120)||(11095395-11095448)
chr3 (20-120)||(48587087-48587186)
chr3 (20-121)||(20764911-20765011)
chr3 (20-121)||(47531869-47531969)
[»] chr1 (22 HSPs)
chr1 (20-120)||(27564731-27564830)
chr1 (20-121)||(32813251-32813351)
chr1 (24-120)||(2581920-2582015)
chr1 (20-120)||(9474872-9474971)
chr1 (12-121)||(44453983-44454091)
chr1 (20-120)||(3000324-3000423)
chr1 (20-120)||(38632317-38632416)
chr1 (20-120)||(44548372-44548471)
chr1 (20-120)||(48716278-48716377)
chr1 (20-120)||(50630463-50630562)
chr1 (14-120)||(51898673-51898778)
chr1 (20-120)||(43137-43236)
chr1 (20-120)||(8346384-8346483)
chr1 (20-120)||(38595159-38595258)
chr1 (20-120)||(47452316-47452415)
chr1 (19-121)||(5958995-5959096)
chr1 (19-121)||(50590995-50591096)
chr1 (20-120)||(37649203-37649302)
chr1 (20-84)||(13414802-13414865)
chr1 (20-121)||(37926434-37926534)
chr1 (12-120)||(3302521-3302628)
chr1 (20-120)||(41758810-41758909)
[»] scaffold0321 (1 HSPs)
scaffold0321 (20-121)||(10105-10205)
[»] scaffold1268 (1 HSPs)
scaffold1268 (14-120)||(919-1024)
[»] scaffold1267 (1 HSPs)
scaffold1267 (14-120)||(919-1024)
[»] scaffold0237 (1 HSPs)
scaffold0237 (20-120)||(4034-4133)
[»] scaffold0316 (1 HSPs)
scaffold0316 (19-104)||(17075-17159)


Alignment Details
Target: chr8 (Bit Score: 64; Significance: 5e-28; HSPs: 26)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 134 - 241
Target Start/End: Complemental strand, 8015136 - 8015030
Alignment:
Q  134 ccatcataaattgtaaaatgggacatgaaaaagatannnnnnnnnagatttatttatctggacgcaagtaaacaccgatcttctctttggacagtgctat 233  Q
    ||||||||||||||||||||||||| |||||| |||         ||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  8015136 ccatcataaattgtaaaatgggacaagaaaaacatatttttttt-agatttatttatctggacgcaagtaaacaccgatcttctctttggacagtgctct 8015038  T
Q  234 atatagca 241  Q
    ||||||||    
T  8015037 atatagca 8015030  T

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Target: chr8; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 20 - 120
Target Start/End: Original strand, 504117 - 504216
Alignment:
Q  20 aaagagaaagtgtgcttgtgtgaggtccacgtgaccacgtgccatattttttgtgtgggtgtcaatagatgtattgccacctatggttgtctatgtatca 119  Q
    |||||||| ||||||||||| | |||||||||||| ||||| || ||||| |||||||||||||| || |||||||||||||| || |||||||||||||    
T  504117 aaagagaatgtgtgcttgtgcggggtccacgtgactacgtgtcagatttt-tgtgtgggtgtcaaaaggtgtattgccacctaagggtgtctatgtatca 504215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 20 - 118
Target Start/End: Complemental strand, 14548026 - 14547929
Alignment:
Q  20 aaagagaaagtgtgcttgtgtgaggtccacgtgaccacgtgccatattttttgtgtgggtgtcaatagatgtattgccacctatggttgtctatgtatc 118  Q
    |||||||||||||||||||| | |||||||||||| ||||| || |||||| |||||||||||||  | |||||||||||||| || ||||||||||||    
T  14548026 aaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagattttt-gtgtgggtgtcaaatggtgtattgccacctaagggtgtctatgtatc 14547929  T

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Target: chr8; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 20 - 120
Target Start/End: Complemental strand, 12831151 - 12831052
Alignment:
Q  20 aaagagaaagtgtgcttgtgtgaggtccacgtgaccacgtgccatattttttgtgtgggtgtcaatagatgtattgccacctatggttgtctatgtatca 119  Q
    |||||||||||||||||||| | |||||||||||| ||||| || | ||||||||||||||||||  | ||||||| |||||| || |||||||||||||    
T  12831151 aaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcaga-tttttgtgtgggtgtcaaagggtgtattgtcacctaagggtgtctatgtatca 12831053  T

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Target: chr8; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 20 - 120
Target Start/End: Complemental strand, 15197437 - 15197338
Alignment:
Q  20 aaagagaaagtgtgcttgtgtgaggtccacgtgaccacgtgccatattttttgtgtgggtgtcaatagatgtattgccacctatggttgtctatgtatca 119  Q
    |||||||||||||||||||| | |||||||||||| ||||| || | ||||||||||||||||||  | |||||||||||||| |  |||||||||||||    
T  15197437 aaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcaga-tttttgtgtgggtgtcaaagggtgtattgccacctaagagtgtctatgtatca 15197339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 20 - 120
Target Start/End: Original strand, 23122593 - 23122692
Alignment:
Q  20 aaagagaaagtgtgcttgtgtgaggtccacgtgaccacgtgccatattttttgtgtgggtgtcaatagatgtattgccacctatggttgtctatgtatca 119  Q
    ||||||||||||||||| || | |||||||||||| ||||| || ||||| |||||||||||||| || ||||||||||| || || |||||||||||||    
T  23122593 aaagagaaagtgtgcttatgcggggtccacgtgactacgtgtcagatttt-tgtgtgggtgtcaaaaggtgtattgccacttaagggtgtctatgtatca 23122691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 20 - 120
Target Start/End: Original strand, 34012292 - 34012391
Alignment:
Q  20 aaagagaaagtgtgcttgtgtgaggtccacgtgaccacgtgccatattttttgtgtgggtgtcaatagatgtattgccacctatggttgtctatgtatca 119  Q
    |||||||||||||||||||| | | |||||||||| ||||| || ||||| ||||||||||||||  | |||||| ||||||| || |||||||||||||    
T  34012292 aaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcaaatttt-tgtgtgggtgtcaaagggtgtattaccacctaagggtgtctatgtatca 34012390  T

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Target: chr8; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 19 - 121
Target Start/End: Original strand, 10284626 - 10284727
Alignment:
Q  19 gaaagagaaagtgtgcttgtgtgaggtccacgtgaccacgtgccatattttttgtgtgggtgtcaataga-tgtattgccacctatggttgtctatgtat 117  Q
    ||||||||||||||||||||| | |||||||||||| ||||| || | |||||||||||||||||| ||| ||||||| ||| || || |||||||||||    
T  10284626 gaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtca-aatttttgtgtgggtgtcaa-agagtgtattgtcacttaagggtgtctatgtat 10284723  T
Q  118 cata 121  Q
    ||||    
T  10284724 cata 10284727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 14 - 120
Target Start/End: Complemental strand, 5957940 - 5957835
Alignment:
Q  14 gagatgaaagagaaagtgtgcttgtgtgaggtccacgtgaccacgtgccatattttttgtgtgggtgtcaatagatgtattgccacctatggttgtctat 113  Q
    |||| ||||||||||||||| ||||| | | |||||||||| ||||| || |||||| |||||||||||||  | |||||||||||||| |  |||||||    
T  5957940 gagaggaaagagaaagtgtgattgtgcgggatccacgtgactacgtgtcagattttt-gtgtgggtgtcaaagggtgtattgccacctaagaatgtctat 5957842  T
Q  114 gtatcat 120  Q
    |||||||    
T  5957841 gtatcat 5957835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 14 - 120
Target Start/End: Complemental strand, 37038589 - 37038484
Alignment:
Q  14 gagatgaaagagaaagtgtgcttgtgtgaggtccacgtgaccacgtgccatattttttgtgtgggtgtcaatagatgtattgccacctatggttgtctat 113  Q
    |||| |||| |||||||||||||||| | | |||||||||| ||||| || |||||| |||||||||||||  | ||||||||||||||  | |||||||    
T  37038589 gagaggaaatagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagattttt-gtgtgggtgtcaaagggtgtattgccacctaaagatgtctat 37038491  T
Q  114 gtatcat 120  Q
    |||||||    
T  37038490 gtatcat 37038484  T

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Target: chr8; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 20 - 120
Target Start/End: Original strand, 40423939 - 40424038
Alignment:
Q  20 aaagagaaagtgtgcttgtgtgaggtccacgtgaccacgtgccatattttttgtgtgggtgtcaatagatgtattgccacctatggttgtctatgtatca 119  Q
    |||||||||||||||||||| | ||||||| |||| ||||| || | ||||||||||| ||||||  | |||||||||||||| || | |||||||||||    
T  40423939 aaagagaaagtgtgcttgtgcggggtccacatgactacgtgtcaga-tttttgtgtggatgtcaaagggtgtattgccacctaagggtatctatgtatca 40424037  T

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Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 15 - 121
Target Start/End: Complemental strand, 17443934 - 17443829
Alignment:
Q  15 agatgaaagagaaagtgtgcttgtgtgaggtccacgtgaccacgtgccatattttttgtgtgggtgtcaatagatgtattgccacctatggttgtctatg 114  Q
    ||||||||||||||||||  ||||||| ||||||| |||| || || || |||||| ||||| |||| || |  ||||||| |||||| |||||||||||    
T  17443934 agatgaaagagaaagtgtctttgtgtggggtccacatgactacatgtcagattttt-gtgtgagtgttaagaagtgtattgtcacctaaggttgtctatg 17443836  T
Q  115 tatcata 121  Q
    |||||||    
T  17443835 tatcata 17443829  T

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Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 67 - 121
Target Start/End: Complemental strand, 24307687 - 24307633
Alignment:
Q  67 tttttgtgtgggtgtcaatagatgtattgccacctatggttgtctatgtatcata 121  Q
    ||||||||||||||||||| |||||||||||||||| || ||| |||||||||||    
T  24307687 tttttgtgtgggtgtcaatggatgtattgccacctaagggtgtttatgtatcata 24307633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 20 - 121
Target Start/End: Original strand, 15048178 - 15048277
Alignment:
Q  20 aaagagaaagtgtgcttgtgtgaggtccacgtgaccacgtgccatattttttgtgtgggtgtcaatagatgtattgccacctatggttgtctatgtatca 119  Q
    |||||||||||||||||||| | |||||| ||| | ||||| || |||||| |||||| ||||||  | |||||||||||||| || |||||||||||||    
T  15048178 aaagagaaagtgtgcttgtgcggggtccatgtggctacgtgtcagattttt-gtgtgg-tgtcaaagggtgtattgccacctaaggatgtctatgtatca 15048275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 20 - 121
Target Start/End: Original strand, 43414577 - 43414677
Alignment:
Q  20 aaagagaaagtgtgcttgtgtgaggtccacgtgaccacgtgccatattttttgtgtgggtgtcaatagatgtattgccacctatggttgtctatgtatca 119  Q
    |||||||||||||||||||| | | |||| |||||||||||  | ||||| ||||||||||||||  | ||| |||||| ||| || |||||||||||||    
T  43414577 aaagagaaagtgtgcttgtgcgggatccatgtgaccacgtgttagatttt-tgtgtgggtgtcaaagggtgtgttgccatctaaggatgtctatgtatca 43414675  T
Q  120 ta 121  Q
    ||    
T  43414676 ta 43414677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 20 - 120
Target Start/End: Original strand, 1179936 - 1180035
Alignment:
Q  20 aaagagaaagtgtgcttgtgtgaggtccacgtgaccacgtgccatattttttgtgtgggtgtcaatagatgtattgccacctatggttgtctatgtatca 119  Q
    |||||||||||||||||||| |   ||||| |||| ||||| || ||||| ||||||||||||||  | |||||| ||||||| || |||||||||||||    
T  1179936 aaagagaaagtgtgcttgtgcggaatccacatgactacgtgtcagatttt-tgtgtgggtgtcaaagggtgtattaccacctaagggtgtctatgtatca 1180034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 14 - 102
Target Start/End: Original strand, 8841422 - 8841509
Alignment:
Q  14 gagatgaaagagaaagtgtgcttgtgtgaggtccacgtgaccacgtgccatattttttgtgtgggtgtcaatagatgtattgccaccta 102  Q
    |||| ||||||||||||||||||||| | |||||||||||| |||||  | | ||||||||||||||||||  | |||| |||||||||    
T  8841422 gagaggaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgttaga-tttttgtgtgggtgtcaaagggtgtactgccaccta 8841509  T

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Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 12 - 120
Target Start/End: Complemental strand, 42221627 - 42221520
Alignment:
Q  12 atgagatgaaagagaaagtgtgcttgtgtgaggtccacgtgaccacgtgccatattttttgtgtgggtgtcaatagatgtattgccacctatggttgtct 111  Q
    ||||||||||||||||||||||||||| || ||||||  |||  ||||| || | |||||||||||||||| |   |||||||| |||||| || ||| |    
T  42221627 atgagatgaaagagaaagtgtgcttgtatggggtccatatgattacgtgtcaga-tttttgtgtgggtgtccaggaatgtattgtcacctaaggatgtat 42221529  T
Q  112 atgtatcat 120  Q
    |||||||||    
T  42221528 atgtatcat 42221520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 19 - 121
Target Start/End: Complemental strand, 16383482 - 16383381
Alignment:
Q  19 gaaagagaaagtgtgcttgtgtgaggtccacgtgaccacgtgccatattttttgtgtgggtgtcaatagatgtattgccacctatggttgtctatgtatc 118  Q
    |||||||||||||| |||||| | ||||||  || |||| || || |||||| |||||||||||||  | |||||||||||||| || ||| ||||||||    
T  16383482 gaaagagaaagtgtacttgtgcggggtccatatggccacatgtcagattttt-gtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatc 16383384  T
Q  119 ata 121  Q
    |||    
T  16383383 ata 16383381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 67 - 121
Target Start/End: Original strand, 24307835 - 24307889
Alignment:
Q  67 tttttgtgtgggtgtcaatagatgtattgccacctatggttgtctatgtatcata 121  Q
    ||||||||||||||||||  |||||||||||||||| || ||| |||||||||||    
T  24307835 tttttgtgtgggtgtcaagggatgtattgccacctaagggtgtttatgtatcata 24307889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 20 - 121
Target Start/End: Original strand, 10621083 - 10621183
Alignment:
Q  20 aaagagaaagtgtgcttgtgtgaggtccacgtgaccacgtgccatattttttgtgtgggtgtcaatagatgtattgccacctatggttgtctatgtatca 119  Q
    |||||||||||||||||||| | | || | ||| | ||||| || | ||||||||||||||||||  | |||||| ||||||| || |||||||||||||    
T  10621083 aaagagaaagtgtgcttgtgcgggatcgatgtggctacgtgtcaga-tttttgtgtgggtgtcaaagggtgtattaccacctaaggatgtctatgtatca 10621181  T
Q  120 ta 121  Q
    ||    
T  10621182 ta 10621183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 20 - 120
Target Start/End: Original strand, 44507083 - 44507182
Alignment:
Q  20 aaagagaaagtgtgcttgtgtgaggtccacgtgaccacgtgccatattttttgtgtgggtgtcaataga-tgtattgccacctatggttgtctatgtatc 118  Q
    ||||||||||| |||||||  | |||||||||||| ||||| || | ||||||||||||||| || ||| |||||| ||||||| || ||||||||||||    
T  44507083 aaagagaaagtatgcttgtacggggtccacgtgactacgtgtcaga-tttttgtgtgggtgttaa-agagtgtattaccacctaagggtgtctatgtatc 44507180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 15 - 70
Target Start/End: Original strand, 42354579 - 42354634
Alignment:
Q  15 agatgaaagagaaagtgtgcttgtgtgaggtccacgtgaccacgtgccatattttt 70  Q
    |||||||||||||||||||||| |||||| ||||| ||| |||||| || ||||||    
T  42354579 agatgaaagagaaagtgtgcttatgtgagatccacatgaacacgtgtcagattttt 42354634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 121
Target Start/End: Original strand, 16056396 - 16056497
Alignment:
Q  19 gaaagagaaagtgtgcttgtgtgaggtccacgtgaccacgtgccatattttttgtgtgggtgtcaatagatgtattgccacctatggttgtctatgtatc 118  Q
    |||||||||||||| |||||| | ||||||  || |||| || || ||||| ||||||||||||||  ||||||||| ||| || || ||| ||||||||    
T  16056396 gaaagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttt-tgtgtgggtgtcaagggatgtattgtcacataaggatgtttatgtatc 16056494  T
Q  119 ata 121  Q
    |||    
T  16056495 ata 16056497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 121
Target Start/End: Complemental strand, 34307321 - 34307220
Alignment:
Q  19 gaaagagaaagtgtgcttgtgtgaggtccacgtgaccacgtgccatattttttgtgtgggtgtcaatagatgtattgccacctatggttgtctatgtatc 118  Q
    |||||||||||||| |||||| | ||| ||  || |||| || || | ||||||||||||||||||  | |||||||||||||| || ||| ||||||||    
T  34307321 gaaagagaaagtgtacttgtgcggggttcatatgtccacatgtcaga-tttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatc 34307223  T
Q  119 ata 121  Q
    |||    
T  34307222 ata 34307220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 52
Target Start/End: Complemental strand, 40467812 - 40467772
Alignment:
Q  12 atgagatgaaagagaaagtgtgcttgtgtgaggtccacgtg 52  Q
    |||||| ||||||||||||||||||||| || |||||||||    
T  40467812 atgagaggaaagagaaagtgtgcttgtgcgaagtccacgtg 40467772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 61; Significance: 3e-26; HSPs: 29)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 20 - 120
Target Start/End: Original strand, 36361909 - 36362008
Alignment:
Q  20 aaagagaaagtgtgcttgtgtgaggtccacgtgaccacgtgccatattttttgtgtgggtgtcaatagatgtattgccacctatggttgtctatgtatca 119  Q
    |||||||||||||||||||||| |||||||||||| ||||| || ||||| ||||||||||||||  |||||||||||||||| || |||||||||||||    
T  36361909 aaagagaaagtgtgcttgtgtggggtccacgtgactacgtgtcagatttt-tgtgtgggtgtcaaaggatgtattgccacctaagggtgtctatgtatca 36362007  T

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Target: chr7; HSP #2
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 20 - 120
Target Start/End: Complemental strand, 3784099 - 3784000
Alignment:
Q  20 aaagagaaagtgtgcttgtgtgaggtccacgtgaccacgtgccatattttttgtgtgggtgtcaatagatgtattgccacctatggttgtctatgtatca 119  Q
    |||||||||||||||||||| | | |||||||||| ||||| || |||||| ||||||||||||| ||||||||||||||||| || |||||||||||||    
T  3784099 aaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagattttt-gtgtgggtgtcaaaagatgtattgccacctaagggtgtctatgtatca 3784001  T

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Target: chr7; HSP #3
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 20 - 120
Target Start/End: Complemental strand, 36362130 - 36362031
Alignment:
Q  20 aaagagaaagtgtgcttgtgtgaggtccacgtgaccacgtgccatattttttgtgtgggtgtcaatagatgtattgccacctatggttgtctatgtatca 119  Q
    |||||||||||||||||||||| |||||||||||| ||||| || | ||||||||||||||||||  |||||||| ||||||| || |||||||||||||    
T  36362130 aaagagaaagtgtgcttgtgtggggtccacgtgactacgtgtcaga-tttttgtgtgggtgtcaaaggatgtattaccacctaagggtgtctatgtatca 36362032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 14 - 121
Target Start/End: Complemental strand, 18207289 - 18207184
Alignment:
Q  14 gagatgaaagagaaagtgtgcttgtgtgaggtccacgtgaccacgtgccatattttttgtgtgggtgtcaatagatgtattgccacctatggttgtctat 113  Q
    |||||||||||||||||||||||||||| ||| |||||| |||||||  | |||||| || |||||||||| || |||||||||||||| ||||||||||    
T  18207289 gagatgaaagagaaagtgtgcttgtgtggggttcacgtg-ccacgtgttagattttt-gtatgggtgtcaagaggtgtattgccacctaaggttgtctat 18207192  T
Q  114 gtatcata 121  Q
    ||||||||    
T  18207191 gtatcata 18207184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 20 - 120
Target Start/End: Complemental strand, 19329946 - 19329847
Alignment:
Q  20 aaagagaaagtgtgcttgtgtgaggtccacgtgaccacgtgccatattttttgtgtgggtgtcaatagatgtattgccacctatggttgtctatgtatca 119  Q
    |||||||||||||||||||| | |||||||||||  ||||| || |||||| ||||||||||||| || |||||||||||||| || |||||||||||||    
T  19329946 aaagagaaagtgtgcttgtgcggggtccacgtgattacgtgtcagattttt-gtgtgggtgtcaaaaggtgtattgccacctaaggatgtctatgtatca 19329848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 20 - 120
Target Start/End: Complemental strand, 7389493 - 7389394
Alignment:
Q  20 aaagagaaagtgtgcttgtgtgaggtccacgtgaccacgtgccatattttttgtgtgggtgtcaataga-tgtattgccacctatggttgtctatgtatc 118  Q
    |||||||||||||||||||| | |||||||||||| ||||| || | |||||||||||||||||| ||| |||||||||||||| || ||||||||||||    
T  7389493 aaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcaga-tttttgtgtgggtgtcaa-agagtgtattgccacctaagggtgtctatgtatc 7389396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 12 - 120
Target Start/End: Original strand, 2318231 - 2318338
Alignment:
Q  12 atgagatgaaagagaaagtgtgcttgtgtgaggtccacgtgaccacgtgccatattttttgtgtgggtgtcaatagatgtattgccacctatggttgtct 111  Q
    ||||||||||||||||||| ||||| |||  |||||||||||||||  | || ||||| |||||||||||||| || ||| |||||||||||||||||      
T  2318231 atgagatgaaagagaaagtatgcttatgtcgggtccacgtgaccacacgtcagatttt-tgtgtgggtgtcaagaggtgtcttgccacctatggttgtta 2318329  T
Q  112 atgtatcat 120  Q
    |||||||||    
T  2318330 atgtatcat 2318338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 20 - 120
Target Start/End: Complemental strand, 3434666 - 3434567
Alignment:
Q  20 aaagagaaagtgtgcttgtgtgaggtccacgtgaccacgtgccatattttttgtgtgggtgtcaatagatgtattgccacctatggttgtctatgtatca 119  Q
    |||||||||||||||||||| | | |||||||||| ||||| ||  |||||||||||||||||||  | |||||||||||||| || |||||||||||||    
T  3434666 aaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcag-ttttttgtgtgggtgtcaaagggtgtattgccacctaaggatgtctatgtatca 3434568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 14 - 121
Target Start/End: Original strand, 39255914 - 39256019
Alignment:
Q  14 gagatgaaagagaaagtgtgcttgtgtgaggtccacgtgaccacgtgccatattttttgtgtgggtgtcaatagatgtattgccacctatggttgtctat 113  Q
    ||||||||||||||||||| ||||||||  ||||||||| ||||||| || |||||| || ||||| ||||  | |||||||||||||| ||||||||||    
T  39255914 gagatgaaagagaaagtgttcttgtgtggagtccacgtg-ccacgtgtcagattttt-gtatgggtatcaagtggtgtattgccacctaaggttgtctat 39256011  T
Q  114 gtatcata 121  Q
    ||||||||    
T  39256012 gtatcata 39256019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 14 - 120
Target Start/End: Original strand, 4999504 - 4999609
Alignment:
Q  14 gagatgaaagagaaagtgtgcttgtgtgaggtccacgtgaccacgtgccatattttttgtgtgggtgtcaatagatgtattgccacctatggttgtctat 113  Q
    ||||| |||||||||||||| ||||| | |||||||||||| ||||  || ||||| |||||||||||||| || |||||||||| ||| || |||||||    
T  4999504 gagataaaagagaaagtgtgtttgtgcggggtccacgtgactacgtatcagatttt-tgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctat 4999602  T
Q  114 gtatcat 120  Q
    |||||||    
T  4999603 gtatcat 4999609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 14 - 95
Target Start/End: Original strand, 16374814 - 16374894
Alignment:
Q  14 gagatgaaagagaaagtgtgcttgtgtgaggtccacgtgaccacgtgccatattttttgtgtgggtgtcaatagatgtattg 95  Q
    |||||||||||||| ||||||||||||||| |||||||||||||||| || | ||||||||||| ||||||  |||||||||    
T  16374814 gagatgaaagagaatgtgtgcttgtgtgagatccacgtgaccacgtgtcaga-tttttgtgtggatgtcaagggatgtattg 16374894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 20 - 120
Target Start/End: Original strand, 8080379 - 8080478
Alignment:
Q  20 aaagagaaagtgtgcttgtgtgaggtccacgtgaccacgtgccatattttttgtgtgggtgtcaatagatgtattgccacctatggttgtctatgtatca 119  Q
    |||||||||||||||||||| | |||||||||||| ||||| || | ||||| ||| ||||||||  | |||||||||||||| || |||||||||||||    
T  8080379 aaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcaga-tttttatgtaggtgtcaaagggtgtattgccacctaagggtgtctatgtatca 8080477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 20 - 120
Target Start/End: Original strand, 19436183 - 19436282
Alignment:
Q  20 aaagagaaagtgtgcttgtgtgaggtccacgtgaccacgtgccatattttttgtgtgggtgtcaatagatgtattgccacctatggttgtctatgtatca 119  Q
    ||||||||||||||||| || | | |||||||||| ||||| || ||||| |||||||||||||| || ||||||| |||||| || |||||||||||||    
T  19436183 aaagagaaagtgtgcttatgcgggatccacgtgactacgtgtcagatttt-tgtgtgggtgtcaaaaggtgtattgtcacctaaggatgtctatgtatca 19436281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 20 - 120
Target Start/End: Complemental strand, 38267144 - 38267045
Alignment:
Q  20 aaagagaaagtgtgcttgtgtgaggtccacgtgaccacgtgccatattttttgtgtgggtgtcaatagatgtattgccacctatggttgtctatgtatca 119  Q
    |||||||||||||||||||| | |||||||||||| ||||| || | ||||||||||||||||||  | ||||||| ||| || || |||||||||||||    
T  38267144 aaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcaga-tttttgtgtgggtgtcaaagggtgtattgtcacataagggtgtctatgtatca 38267046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 14 - 121
Target Start/End: Complemental strand, 36208283 - 36208177
Alignment:
Q  14 gagatgaaagagaaagtgtgcttgtgtgaggtccacgtgaccacgtgccatattttttgtgtgggtgtcaatagatgtattgccacctatggttgtctat 113  Q
    |||| |||||||||| ||||||||||   ||||||||||||||| || ||  ||||| ||||||||||||||  ||||||| ||||||| || |||||||    
T  36208283 gagaggaaagagaaaatgtgcttgtgcagggtccacgtgaccacatgtcagcttttt-gtgtgggtgtcaatgaatgtattaccacctaagggtgtctat 36208185  T
Q  114 gtatcata 121  Q
    ||||||||    
T  36208184 gtatcata 36208177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 20 - 120
Target Start/End: Complemental strand, 35137637 - 35137538
Alignment:
Q  20 aaagagaaagtgtgcttgtgtgaggtccacgtgaccacgtgccatattttttgtgtgggtgtcaatagatgtattgccacctatggttgtctatgtatca 119  Q
    |||||||||||||| ||||| | |||||||||||| |||||  | |||||| |||||||||||||  | |||||||||||||| || ||||||| |||||    
T  35137637 aaagagaaagtgtgtttgtgcggggtccacgtgactacgtgttagattttt-gtgtgggtgtcaaagggtgtattgccacctaagggtgtctatttatca 35137539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 20 - 120
Target Start/End: Complemental strand, 38837321 - 38837222
Alignment:
Q  20 aaagagaaagtgtgcttgtgtgaggtccacgtgaccacgtgccatattttttgtgtgggtgtcaatagatgtattgccacctatggttgtctatgtatca 119  Q
    |||||||||||||||||||| | |||||||||||| ||||| || | ||||||||| |||||  |  | |||||||||||||| || |||||||||||||    
T  38837321 aaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcaga-tttttgtgtaggtgtacaagggtgtattgccacctaagggtgtctatgtatca 38837223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 20 - 121
Target Start/End: Complemental strand, 35522980 - 35522880
Alignment:
Q  20 aaagagaaagtgtgcttgtgtgaggtccacgtgaccacgtgccatattttttgtgtgggtgtcaatagatgtattgccacctatggttgtctatgtatca 119  Q
    |||||||||||||||||||| | | ||||  || ||||||| || |||||| |||||||||| ||  | ||||||||||| || || |||||||||||||    
T  35522980 aaagagaaagtgtgcttgtgcgggatccatatggccacgtgtcagattttt-gtgtgggtgttaaatggtgtattgccacttaaggatgtctatgtatca 35522882  T
Q  120 ta 121  Q
    ||    
T  35522881 ta 35522880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 20 - 120
Target Start/End: Complemental strand, 40957811 - 40957712
Alignment:
Q  20 aaagagaaagtgtgcttgtgtgaggtccacgtgaccacgtgccatattttttgtgtgggtgtcaataga-tgtattgccacctatggttgtctatgtatc 118  Q
    |||||||||||||||||||  | | |||||||||| ||||| || | ||||||||||||| |||| ||| |||||||||||||| |  ||||||||||||    
T  40957811 aaagagaaagtgtgcttgtacgggatccacgtgactacgtgtcaga-tttttgtgtgggtatcaa-agagtgtattgccacctaagagtgtctatgtatc 40957714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 120
Target Start/End: Complemental strand, 3694471 - 3694372
Alignment:
Q  20 aaagagaaagtgtgcttgtgtgaggtccacgtgaccacgtgccatattttttgtgtgggtgtcaatagatgtattgccacctatggttgtctatgtatca 119  Q
    |||||||||||||||||||| | | ||||| |||| ||||| || | ||||||||||||||| || || ||||||| |||||| || ||| ||| |||||    
T  3694471 aaagagaaagtgtgcttgtgcgggatccacatgactacgtgtcaga-tttttgtgtgggtgttaaaaggtgtattgtcacctaagggtgtgtatatatca 3694373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 120
Target Start/End: Original strand, 32951489 - 32951588
Alignment:
Q  20 aaagagaaagtgtgcttgtgtgaggtccacgtgaccacgtgccatattttttgtgtgggtgtcaatagatgtattgccacctatggttgtctatgtatca 119  Q
    |||||||||||||||||||| | |||||||||||| |||||  | | ||||||||||| ||| ||  ||||||||| || ||| |  |||||||||||||    
T  32951489 aaagagaaagtgtgcttgtgcggggtccacgtgactacgtgttaga-tttttgtgtggatgttaaaggatgtattgtcatctaagagtgtctatgtatca 32951587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 30 - 121
Target Start/End: Original strand, 46374808 - 46374898
Alignment:
Q  30 tgtgcttgtgtgaggtccacgtgaccacgtgccatattttttgtgtgggtgtcaatagatgtattgccacctatggttgtctatgtatcata 121  Q
    |||||||||| | |||||| ||| ||||||| || ||||| ||||||||||| ||  | ||| |||||||||| || |||||||||||||||    
T  46374808 tgtgcttgtgcggggtccatgtggccacgtgtcagatttt-tgtgtgggtgttaaagggtgtgttgccacctaaggatgtctatgtatcata 46374898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 121
Target Start/End: Complemental strand, 22343466 - 22343365
Alignment:
Q  19 gaaagagaaagtgtgcttgtgtgaggtccacgtgaccacgtgccatattttttgtgtgggtgtcaatagatgtattgccacctatggttgtctatgtatc 118  Q
    |||||||||||||| |||||| | ||||||  ||  ||| || || | ||||||||||||||||||  | |||||||||||||| || ||| ||||||||    
T  22343466 gaaagagaaagtgtacttgtgcggggtccatatggtcacatgtcaga-tttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatc 22343368  T
Q  119 ata 121  Q
    |||    
T  22343367 ata 22343365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 121
Target Start/End: Complemental strand, 41915846 - 41915745
Alignment:
Q  19 gaaagagaaagtgtgcttgtgtgaggtccacgtgaccacgtgccatattttttgtgtgggtgtcaatagatgtattgccacctatggttgtctatgtatc 118  Q
    |||||||||||||| |||||| | ||||||  || |||| || || |||||| |||| ||||||||  | |||||||||||||| || ||| ||||||||    
T  41915846 gaaagagaaagtgtacttgtgcggggtccatatggccacatgtcagattttt-gtgtaggtgtcaaggggtgtattgccacctaagggtgtttatgtatc 41915748  T
Q  119 ata 121  Q
    |||    
T  41915747 ata 41915745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 67 - 120
Target Start/End: Original strand, 10343605 - 10343658
Alignment:
Q  67 tttttgtgtgggtgtcaatagatgtattgccacctatggttgtctatgtatcat 120  Q
    |||||||||||||||||| |  |||||| ||||||| || ||||||||||||||    
T  10343605 tttttgtgtgggtgtcaagatgtgtatttccacctaagggtgtctatgtatcat 10343658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 67 - 120
Target Start/End: Original strand, 35468897 - 35468950
Alignment:
Q  67 tttttgtgtgggtgtcaatagatgtattgccacctatggttgtctatgtatcat 120  Q
    ||||| ||||||||||||  |||||||||||| ||| || ||||||||||||||    
T  35468897 tttttatgtgggtgtcaaatgatgtattgccatctaaggatgtctatgtatcat 35468950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 120
Target Start/End: Complemental strand, 11044237 - 11044193
Alignment:
Q  76 gggtgtcaatagatgtattgccacctatggttgtctatgtatcat 120  Q
    |||||||||  |||||||||||||||| || ||||||||||||||    
T  11044237 gggtgtcaaaggatgtattgccacctaagggtgtctatgtatcat 11044193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 60
Target Start/End: Complemental strand, 11044290 - 11044242
Alignment:
Q  12 atgagatgaaagagaaagtgtgcttgtgtgaggtccacgtgaccacgtg 60  Q
    |||||| |||||||||||||| |||||| | |||||||||||| |||||    
T  11044290 atgagaggaaagagaaagtgtacttgtgcggggtccacgtgactacgtg 11044242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 121
Target Start/End: Complemental strand, 21234504 - 21234405
Alignment:
Q  21 aagagaaagtgtgcttgtgtgaggtccacgtgaccacgtgccatattttttgtgtgggtgtcaatagatgtattgccacctatggttgtctatgtatcat 120  Q
    |||||||| |||||||||| | ||| || ||| | ||||| || |||||| ||||| |||||||  | ||||||| |||||| || ||||||||||||||    
T  21234504 aagagaaaatgtgcttgtgcggggtacatgtggctacgtgtcaaattttt-gtgtgagtgtcaaagggtgtattgtcacctaaggatgtctatgtatcat 21234406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 61; Significance: 3e-26; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 20 - 120
Target Start/End: Complemental strand, 17598658 - 17598559
Alignment:
Q  20 aaagagaaagtgtgcttgtgtgaggtccacgtgaccacgtgccatattttttgtgtgggtgtcaatagatgtattgccacctatggttgtctatgtatca 119  Q
    |||||||||||||||||||| | |||||||||||| ||||| || |||||| ||||||||||||| ||||||||||||||||| || |||||||||||||    
T  17598658 aaagagaaagtgtgcttgtgcggggtccacgtgacaacgtgtcagattttt-gtgtgggtgtcaaaagatgtattgccacctaagggtgtctatgtatca 17598560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 20 - 118
Target Start/End: Complemental strand, 32869782 - 32869685
Alignment:
Q  20 aaagagaaagtgtgcttgtgtgaggtccacgtgaccacgtgccatattttttgtgtgggtgtcaatagatgtattgccacctatggttgtctatgtatc 118  Q
    |||||||||||||||||||| | |||||||||||| ||||| || |||||| |||||||||||||  | |||||||||||||| || ||||||||||||    
T  32869782 aaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagattttt-gtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatc 32869685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 20 - 120
Target Start/End: Original strand, 22880654 - 22880753
Alignment:
Q  20 aaagagaaagtgtgcttgtgtgaggtccacgtgaccacgtgccatattttttgtgtgggtgtcaatagatgtattgccacctatggttgtctatgtatca 119  Q
    |||||||||||||||||||| | |||||||||||| ||||| || | |||| |||||||||||||  | |||||||||||||| || |||||||||||||    
T  22880654 aaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagaatttt-gtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatca 22880752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 15 - 120
Target Start/End: Original strand, 31953021 - 31953125
Alignment:
Q  15 agatgaaagagaaagtgtgcttgtgtgaggtccacgtgaccacgtgccatattttttgtgtgggtgtcaatagatgtattgccacctatggttgtctatg 114  Q
    ||||||||||||||||||| ||||||||||||||| ||| ||| || || | ||||| ||||||||||||  | |||||||||||||| || |||||||     
T  31953021 agatgaaagagaaagtgtgtttgtgtgaggtccacatgaacacatgtcaga-tttttatgtgggtgtcaaggggtgtattgccacctaaggatgtctatc 31953119  T
Q  115 tatcat 120  Q
    ||||||    
T  31953120 tatcat 31953125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 20 - 120
Target Start/End: Complemental strand, 11427722 - 11427621
Alignment:
Q  20 aaagagaaagtgtgcttgtgtgaggtccacgtgaccacgtgccatattttttgtgtgggtgtcaatagatgtattgccaccta--tggttgtctatgtat 117  Q
    |||||||||||||||||||| | | |||||||||| ||||| || |||||| |||||||||||||  ||||||||||||||||   || |||||||||||    
T  11427722 aaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagattttt-gtgtgggtgtcaaaggatgtattgccacctaagagggtgtctatgtat 11427624  T
Q  118 cat 120  Q
    |||    
T  11427623 cat 11427621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 15 - 121
Target Start/End: Original strand, 9379703 - 9379808
Alignment:
Q  15 agatgaaagagaaagtgtgcttgtgtgaggtccacgtgaccacgtgccatattttttgtgtgggtgtcaatagatgtattgccacctatggttgtctatg 114  Q
    |||||||||||||| |||| ||||||||| ||||| || ||||||| || | ||||||| ||||||||||  ||||||||| || ||| || ||||||||    
T  9379703 agatgaaagagaaaatgtgtttgtgtgagatccacatggccacgtgtca-aatttttgtatgggtgtcaagggatgtattgtcatctaaggatgtctatg 9379801  T
Q  115 tatcata 121  Q
    |||||||    
T  9379802 tatcata 9379808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 15 - 120
Target Start/End: Original strand, 28536479 - 28536581
Alignment:
Q  15 agatgaaagagaaagtgtgcttgtgtgaggtccacgtgaccacgtgccatattttttgtgtgggtgtcaatagatgtattgccacctatggttgtctatg 114  Q
    |||| |||||||||||||||||||||| ||||||| |||||  ||| || ||||| ||||||||||||||  | |||||||||||||| || ||| ||||    
T  28536479 agataaaagagaaagtgtgcttgtgtggggtccacatgacc--gtgtcagatttt-tgtgtgggtgtcaagggttgtattgccacctaaggatgtttatg 28536575  T
Q  115 tatcat 120  Q
    ||||||    
T  28536576 tatcat 28536581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 20 - 120
Target Start/End: Original strand, 6209461 - 6209560
Alignment:
Q  20 aaagagaaagtgtgcttgtgtgaggtccacgtgaccacgtgccatattttttgtgtgggtgtc-aatagatgtattgccacctatggttgtctatgtatc 118  Q
    |||||||||||||||| ||| | |||||||||||| ||||| || | |||||||||| ||||| ||||| |||||||||||||| || ||||||||||||    
T  6209461 aaagagaaagtgtgctagtgcggggtccacgtgactacgtgacaga-tttttgtgtgagtgtcaaatag-tgtattgccacctaagggtgtctatgtatc 6209558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 20 - 121
Target Start/End: Complemental strand, 31976352 - 31976252
Alignment:
Q  20 aaagagaaagtgtgcttgtgtgaggtccacgtgaccacgtgccatattttttgtgtgggtgtcaatagatgtattgccacctatggttgtctatgtatca 119  Q
    |||||||||||||||||||| | ||| || ||||||||||| || |||||| |||||||||| ||  | | |||||||||||| || |||||||||||||    
T  31976352 aaagagaaagtgtgcttgtgcggggttcatgtgaccacgtgtcagattttt-gtgtgggtgttaaagggtatattgccacctaaggatgtctatgtatca 31976254  T
Q  120 ta 121  Q
    ||    
T  31976253 ta 31976252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 20 - 94
Target Start/End: Original strand, 23128123 - 23128196
Alignment:
Q  20 aaagagaaagtgtgcttgtgtgaggtccacgtgaccacgtgccatattttttgtgtgggtgtcaatagatgtatt 94  Q
    |||||||||||||||||||||| | |||||||||| ||||| || | ||||||||||||||||||  ||||||||    
T  23128123 aaagagaaagtgtgcttgtgtgggatccacgtgactacgtgtcaga-tttttgtgtgggtgtcaaaggatgtatt 23128196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 19 - 121
Target Start/End: Original strand, 15508019 - 15508120
Alignment:
Q  19 gaaagagaaagtgtgcttgtgtgaggtccacgtgaccacgtgccatattttttgtgtgggtgtcaatagatgtattgccacctatggttgtctatgtatc 118  Q
    |||||||||||||| |||||| | ||||||  || |||| || || ||||| ||||||||||||||  | |||||||||||||| || ||| ||||||||    
T  15508019 gaaagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttt-tgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatc 15508117  T
Q  119 ata 121  Q
    |||    
T  15508118 ata 15508120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 19 - 121
Target Start/End: Original strand, 15990037 - 15990138
Alignment:
Q  19 gaaagagaaagtgtgcttgtgtgaggtccacgtgaccacgtgccatattttttgtgtgggtgtcaatagatgtattgccacctatggttgtctatgtatc 118  Q
    |||||||||||||| |||||| | ||||||  || |||| || || ||||| ||||||||||||||  | |||||||||||||| || ||| ||||||||    
T  15990037 gaaagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttt-tgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatc 15990135  T
Q  119 ata 121  Q
    |||    
T  15990136 ata 15990138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 19 - 121
Target Start/End: Original strand, 30341355 - 30341456
Alignment:
Q  19 gaaagagaaagtgtgcttgtgtgaggtccacgtgaccacgtgccatattttttgtgtgggtgtcaatagatgtattgccacctatggttgtctatgtatc 118  Q
    |||||||||||||| |||||| | ||||||  || |||| || || ||||| ||||||||||||||  | |||||||||||||| || ||| ||||||||    
T  30341355 gaaagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttt-tgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatc 30341453  T
Q  119 ata 121  Q
    |||    
T  30341454 ata 30341456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 120
Target Start/End: Complemental strand, 29857931 - 29857832
Alignment:
Q  20 aaagagaaagtgtgcttgtgtgaggtccacgtgaccacgtgccatattttttgtgtgggtgtcaatagatgtattgccacctatggttgtctatgtatca 119  Q
    ||||||||||||||||| || | | ||||||| || ||||| || |||||| |||||||||| || || |||||||||| |||  | |||||||||||||    
T  29857931 aaagagaaagtgtgcttatgcgggatccacgtaactacgtgtcagattttt-gtgtgggtgttaaaaggtgtattgccatctaaaggtgtctatgtatca 29857833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 120
Target Start/End: Complemental strand, 12732592 - 12732487
Alignment:
Q  14 gagatgaaagagaaagtgtgcttgtgtgaggtccacgtgaccacgtgccatattttttgtgtgggtgtcaatagatgtattgccacctatggttgtctat 113  Q
    ||||||||||||||| ||||||| |||| | ||||| |  ||||||| || |||||| ||||||||||||||   | ||||||||| || |  |||||||    
T  12732592 gagatgaaagagaaaatgtgcttatgtgggatccacatagccacgtgtcagattttt-gtgtgggtgtcaatgattatattgccacttaagaatgtctat 12732494  T
Q  114 gtatcat 120  Q
    |||||||    
T  12732493 gtatcat 12732487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 20 - 113
Target Start/End: Original strand, 31109396 - 31109488
Alignment:
Q  20 aaagagaaagtgtgcttgtgtgaggtccacgtgaccacgtgccatattttttgtgtgggtgtcaatagatgtattgccacctatggttgtctat 113  Q
    ||||||||||||| ||| || | |||| ||||||| ||||| || ||||| ||||||| ||||||  | |||||||||||||| || |||||||    
T  31109396 aaagagaaagtgtacttttgcggggtctacgtgactacgtgtcagatttt-tgtgtggatgtcaaagggtgtattgccacctaagggtgtctat 31109488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 68 - 120
Target Start/End: Original strand, 22422061 - 22422113
Alignment:
Q  68 ttttgtgtgggtgtcaatagatgtattgccacctatggttgtctatgtatcat 120  Q
    |||||| || ||||||| |||| |||||||||||| || ||||||||||||||    
T  22422061 ttttgtatgagtgtcaagagatctattgccacctaaggatgtctatgtatcat 22422113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 56; Significance: 3e-23; HSPs: 25)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 14 - 121
Target Start/End: Original strand, 35943882 - 35943988
Alignment:
Q  14 gagatgaaagagaaagtgtgcttgtgtgaggtccacgtgaccacgtgccatattttttgtgtgggtgtcaatagatgtattgccacctatggttgtctat 113  Q
    |||| ||||||||||||||||||||||| | ||||||| || ||||| || ||||| ||||||||||||||  |||||||||||||||| || |||||||    
T  35943882 gagaggaaagagaaagtgtgcttgtgtgggatccacgtaactacgtgtcagatttt-tgtgtgggtgtcaaatgatgtattgccacctaagggtgtctat 35943980  T
Q  114 gtatcata 121  Q
    ||||||||    
T  35943981 gtatcata 35943988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 14 - 120
Target Start/End: Original strand, 18520874 - 18520979
Alignment:
Q  14 gagatgaaagagaaagtgtgcttgtgtgaggtccacgtgaccacgtgccatattttttgtgtgggtgtcaatagatgtattgccacctatggttgtctat 113  Q
    ||||| |||||||||||||||||||| | |||||||||||| ||||| || ||||| ||||||||||||||  | |||||||||||||| || |||||||    
T  18520874 gagataaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttt-tgtgtgggtgtcaaagggtgtattgccacctaagggtgtctat 18520972  T
Q  114 gtatcat 120  Q
    |||||||    
T  18520973 gtatcat 18520979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 21 - 118
Target Start/End: Complemental strand, 13811755 - 13811659
Alignment:
Q  21 aagagaaagtgtgcttgtgtgaggtccacgtgaccacgtgccatattttttgtgtgggtgtcaatagatgtattgccacctatggttgtctatgtatc 118  Q
    ||||||||||||||||||| | |||||||||||| ||||| || |||||| |||||||||||||  |||||||||||||||| || ||||||||||||    
T  13811755 aagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagattttt-gtgtgggtgtcaaatgatgtattgccacctaagggtgtctatgtatc 13811659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 20 - 121
Target Start/End: Complemental strand, 28177879 - 28177779
Alignment:
Q  20 aaagagaaagtgtgcttgtgtgaggtccacgtgaccacgtgccatattttttgtgtgggtgtcaatagatgtattgccacctatggttgtctatgtatca 119  Q
    |||||||||||||| ||||| | |||||| ||||||||||| || |||||| |||||||||||||  | |||||||||||||| || |||||||||||||    
T  28177879 aaagagaaagtgtgtttgtgcggggtccatgtgaccacgtgtcagattttt-gtgtgggtgtcaaagggtgtattgccacctaaggatgtctatgtatca 28177781  T
Q  120 ta 121  Q
    ||    
T  28177780 ta 28177779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 20 - 120
Target Start/End: Complemental strand, 2740378 - 2740279
Alignment:
Q  20 aaagagaaagtgtgcttgtgtgaggtccacgtgaccacgtgccatattttttgtgtgggtgtcaatagatgtattgccacctatggttgtctatgtatca 119  Q
    |||||||||||||||||||| | | |||||||||| ||||| || |||||| |||||||||||||  | |||||||||||||| || |||||||||||||    
T  2740378 aaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagattttt-gtgtgggtgtcaaagggtgtattgccacctaaggatgtctatgtatca 2740280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 14 - 120
Target Start/End: Original strand, 6259991 - 6260096
Alignment:
Q  14 gagatgaaagagaaagtgtgcttgtgtgaggtccacgtgaccacgtgccatattttttgtgtgggtgtcaatagatgtattgccacctatggttgtctat 113  Q
    ||||||||||||||||||||||| ||||||||||| ||||||| |||  | | |||||| |||||||| ||  | ||||||| ||||||||||||| |||    
T  6259991 gagatgaaagagaaagtgtgcttctgtgaggtccatgtgaccatgtgttaga-tttttgcgtgggtgttaaagggtgtattgtcacctatggttgtgtat 6260089  T
Q  114 gtatcat 120  Q
    |||||||    
T  6260090 gtatcat 6260096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 20 - 121
Target Start/End: Complemental strand, 6679802 - 6679702
Alignment:
Q  20 aaagagaaagtgtgcttgtgtgaggtccacgtgaccacgtgccatattttttgtgtgggtgtcaatagatgtattgccacctatggttgtctatgtatca 119  Q
    ||||||||| |||| ||||| | |||||| ||||||||||| || |||||| ||||||||||||| || ||||||||||||||  | |||||||||||||    
T  6679802 aaagagaaaatgtgtttgtgcggggtccatgtgaccacgtgtcagattttt-gtgtgggtgtcaaaaggtgtattgccacctaaagatgtctatgtatca 6679704  T
Q  120 ta 121  Q
    ||    
T  6679703 ta 6679702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 17 - 102
Target Start/End: Complemental strand, 16328008 - 16327924
Alignment:
Q  17 atgaaagagaaagtgtgcttgtgtgaggtccacgtgaccacgtgccatattttttgtgtgggtgtcaatagatgtattgccaccta 102  Q
    |||||||| |||||||||||||||||||| ||| ||| |||||| || | ||||| ||||||||||||| ||||||||||||||||    
T  16328008 atgaaagaaaaagtgtgcttgtgtgaggtgcacatgaacacgtgtcaga-tttttatgtgggtgtcaatggatgtattgccaccta 16327924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 20 - 120
Target Start/End: Original strand, 33149634 - 33149733
Alignment:
Q  20 aaagagaaagtgtgcttgtgtgaggtccacgtgaccacgtgccatattttttgtgtgggtgtcaatagatgtattgccacctatggttgtctatgtatca 119  Q
    |||||||||||||||||||| | | |||||||||| ||||| || ||||| ||||||||||||||  | |||||| ||||||| || |||||||||||||    
T  33149634 aaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcaaatttt-tgtgtgggtgtcaaagggtgtattaccacctaagggtgtctatgtatca 33149732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 20 - 120
Target Start/End: Complemental strand, 35785303 - 35785204
Alignment:
Q  20 aaagagaaagtgtgcttgtgtgaggtccacgtgaccacgtgccatattttttgtgtgggtgtcaatagatgtattgccacctatggttgtctatgtatca 119  Q
    |||||||||||||| ||||| | | ||||||| || ||||| || |||||| ||||||||||||| || |||||||||||||| || |||||||||||||    
T  35785303 aaagagaaagtgtgattgtgcgggatccacgtaactacgtgtcagattttt-gtgtgggtgtcaaaaggtgtattgccacctaagggtgtctatgtatca 35785205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 20 - 120
Target Start/End: Original strand, 36732938 - 36733037
Alignment:
Q  20 aaagagaaagtgtgcttgtgtgaggtccacgtgaccacgtgccatattttttgtgtgggtgtcaatagatgtattgccacctatggttgtctatgtatca 119  Q
    |||||||||||||||||||| | |||||||||||| | ||| || ||||| ||||||||||||||  | |||||||| ||||| || |||||||||||||    
T  36732938 aaagagaaagtgtgcttgtgcggggtccacgtgactatgtgtcagatttt-tgtgtgggtgtcaaagggtgtattgctacctaagggtgtctatgtatca 36733036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 20 - 120
Target Start/End: Complemental strand, 40145511 - 40145412
Alignment:
Q  20 aaagagaaagtgtgcttgtgtgaggtccacgtgaccacgtgccatattttttgtgtgggtgtcaatagatgtattgccacctatggttgtctatgtatca 119  Q
    |||||||||||||||||||| | |||||||||||| ||||| || | ||||||||||| ||| ||  | |||||||||||||| || |||||||||||||    
T  40145511 aaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcaga-tttttgtgtggatgttaaagggtgtattgccacctaagggtgtctatgtatca 40145413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 20 - 120
Target Start/End: Original strand, 42414298 - 42414397
Alignment:
Q  20 aaagagaaagtgtgcttgtgtgaggtccacgtgaccacgtgccatattttttgtgtgggtgtcaatagatgtattgccacctatggttgtctatgtatca 119  Q
    ||||| |||||||||||||| | ||||||| |||| ||||| || ||||| ||||||||||||||  | ||||||||||||||  | |||||||||||||    
T  42414298 aaagataaagtgtgcttgtgcggggtccacatgactacgtgtcagatttt-tgtgtgggtgtcaaagggtgtattgccacctactggtgtctatgtatca 42414396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 20 - 121
Target Start/End: Original strand, 15409606 - 15409706
Alignment:
Q  20 aaagagaaagtgtgcttgtgtgaggtccacgtgaccacgtgccatattttttgtgtgggtgtcaatagatgtattgccacctatggttgtctatgtatca 119  Q
    ||||||| |||||||||||| | |||||| ||| | ||||| || ||||| ||||||||||||||   |||||||| |||||| || |||||||||||||    
T  15409606 aaagagagagtgtgcttgtgcggggtccatgtggctacgtgtcagatttt-tgtgtgggtgtcaaagaatgtattgtcacctaaggatgtctatgtatca 15409704  T
Q  120 ta 121  Q
    ||    
T  15409705 ta 15409706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 20 - 121
Target Start/End: Complemental strand, 26720620 - 26720520
Alignment:
Q  20 aaagagaaagtgtgcttgtgtgaggtccacgtgaccacgtgccatattttttgtgtgggtgtcaatagatgtattgccacctatggttgtctatgtatca 119  Q
    |||||||||||||||||||| | | |||| ||| ||||||| || ||||||| ||| ||||| ||  | |||||||||||||| || |||||||||||||    
T  26720620 aaagagaaagtgtgcttgtgcgggatccatgtggccacgtgtcagatttttt-tgtaggtgttaaagggtgtattgccacctaaggatgtctatgtatca 26720522  T
Q  120 ta 121  Q
    ||    
T  26720521 ta 26720520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 20 - 121
Target Start/End: Complemental strand, 26990369 - 26990269
Alignment:
Q  20 aaagagaaagtgtgcttgtgtgaggtccacgtgaccacgtgccatattttttgtgtgggtgtcaatagatgtattgccacctatggttgtctatgtatca 119  Q
    |||||||||||||||||||| | | |||| ||| ||||||| || ||||||| ||| ||||| ||  | |||||||||||||| || |||||||||||||    
T  26990369 aaagagaaagtgtgcttgtgcgggatccatgtggccacgtgtcagatttttt-tgtaggtgttaaagggtgtattgccacctaaggatgtctatgtatca 26990271  T
Q  120 ta 121  Q
    ||    
T  26990270 ta 26990269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 24 - 120
Target Start/End: Complemental strand, 14831914 - 14831819
Alignment:
Q  24 agaaagtgtgcttgtgtgaggtccacgtgaccacgtgccatattttttgtgtgggtgtcaatagatgtattgccacctatggttgtctatgtatcat 120  Q
    |||||||||||||||| | | |||||||||| ||||| || ||||||  ||||||||||||  | |||||||||||||| |  ||||||||||||||    
T  14831914 agaaagtgtgcttgtgcgggatccacgtgactacgtgtcagattttta-tgtgggtgtcaaagggtgtattgccacctaagagtgtctatgtatcat 14831819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 67 - 121
Target Start/End: Complemental strand, 10356693 - 10356638
Alignment:
Q  67 tttttgtgtgggtgtcaatag-atgtattgccacctatggttgtctatgtatcata 121  Q
    ||||||||||||||||||| | ||||||||||||||| || |||||||||||||||    
T  10356693 tttttgtgtgggtgtcaatgggatgtattgccacctaaggatgtctatgtatcata 10356638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 19 - 121
Target Start/End: Original strand, 2252163 - 2252264
Alignment:
Q  19 gaaagagaaagtgtgcttgtgtgaggtccacgtgaccacgtgccatattttttgtgtgggtgtcaatagatgtattgccacctatggttgtctatgtatc 118  Q
    |||||||||||||| |||||| | ||||||  || |||| || || ||||| ||||||||||||||  | |||||||||||||| || ||| ||||||||    
T  2252163 gaaagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttt-tgtgtgggtgtcaaggggtgtattgccacctaaggatgtttatgtatc 2252261  T
Q  119 ata 121  Q
    |||    
T  2252262 ata 2252264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 19 - 121
Target Start/End: Original strand, 3921260 - 3921361
Alignment:
Q  19 gaaagagaaagtgtgcttgtgtgaggtccacgtgaccacgtgccatattttttgtgtgggtgtcaatagatgtattgccacctatggttgtctatgtatc 118  Q
    |||||||||||||| |||||| | ||||||  || |||| || || ||||| ||||||||||||||  | |||||||||||||| || ||| ||||||||    
T  3921260 gaaagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttt-tgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatc 3921358  T
Q  119 ata 121  Q
    |||    
T  3921359 ata 3921361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 15 - 120
Target Start/End: Original strand, 33825315 - 33825419
Alignment:
Q  15 agatgaaagagaaagtgtgcttgtgtgaggtccacgtgaccacgtgccatattttttgtgtgggtgtcaatagatgtattgccacctatggttgtctatg 114  Q
    |||| ||||||||||||||||||||| |||| ||| ||| |||||| || | ||||| ||||||||||||    |||||||||||||| |  ||||||||    
T  33825315 agataaaagagaaagtgtgcttgtgtaaggttcacatgaacacgtgtcaga-tttttatgtgggtgtcaaggagtgtattgccacctaagaatgtctatg 33825413  T
Q  115 tatcat 120  Q
     |||||    
T  33825414 catcat 33825419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 67 - 120
Target Start/End: Original strand, 36875645 - 36875698
Alignment:
Q  67 tttttgtgtgggtgtcaatagatgtattgccacctatggttgtctatgtatcat 120  Q
    ||||||||||||||||||  | |||||||||||||| || ||||||||||||||    
T  36875645 tttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcat 36875698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 110
Target Start/End: Original strand, 39557507 - 39557602
Alignment:
Q  14 gagatgaaagagaaagtgtgcttgtgtgaggtccacgtgaccacgtgccatattttttgtgtgggtgtcaatagatgtattgccacctatggttgtc 110  Q
    ||||| |||||||||||||| |||| || |||||| |||| |||||| || | ||||||||||| ||| || || |||||| ||||||||| |||||    
T  39557507 gagataaaagagaaagtgtgattgtatggggtccatgtgatcacgtgtcaga-tttttgtgtggatgttaagaggtgtattaccacctatgattgtc 39557602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 121
Target Start/End: Complemental strand, 31009093 - 31008992
Alignment:
Q  19 gaaagagaaagtgtgcttgtgtgaggtccacgtgaccacgtgccatattttttgtgtgggtgtcaatagatgtattgccacctatggttgtctatgtatc 118  Q
    |||| |||||||||||||||| | | |||||||||| ||||| || | |||||||||||||||  |   |||||||| |||||| || ||| ||||||||    
T  31009093 gaaatagaaagtgtgcttgtgcgggatccacgtgactacgtgtcaga-tttttgtgtgggtgtggaagaatgtattgtcacctaaggatgtttatgtatc 31008995  T
Q  119 ata 121  Q
    |||    
T  31008994 ata 31008992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 67 - 121
Target Start/End: Original strand, 39688939 - 39688993
Alignment:
Q  67 tttttgtgtgggtgtcaatagatgtattgccacctatggttgtctatgtatcata 121  Q
    ||||||||||||||||||  ||||||||||||| || || ||| |||||||||||    
T  39688939 tttttgtgtgggtgtcaagggatgtattgccacttaagggtgtttatgtatcata 39688993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 56; Significance: 3e-23; HSPs: 28)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 14 - 121
Target Start/End: Original strand, 17819994 - 17820100
Alignment:
Q  14 gagatgaaagagaaagtgtgcttgtgtgaggtccacgtgaccacgtgccatattttttgtgtgggtgtcaatagatgtattgccacctatggttgtctat 113  Q
    ||||||||||||||| |||| ||||||| ||||||||| ||||| || || ||||| ||||||||||||||  | ||||||||||||||| |||||||||    
T  17819994 gagatgaaagagaaaatgtgtttgtgtggggtccacgtaaccacatgtcagatttt-tgtgtgggtgtcaaggggtgtattgccacctatagttgtctat 17820092  T
Q  114 gtatcata 121  Q
    ||||||||    
T  17820093 gtatcata 17820100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 14 - 120
Target Start/End: Original strand, 7465725 - 7465830
Alignment:
Q  14 gagatgaaagagaaagtgtgcttgtgtgaggtccacgtgaccacgtgccatattttttgtgtgggtgtcaatagatgtattgccacctatggttgtctat 113  Q
    ||||| |||||||||||||||||||||| |||||||||||| ||||| || | ||||||||||||||||||  | |||||||||| ||| || |||||||    
T  7465725 gagataaaagagaaagtgtgcttgtgtggggtccacgtgactacgtgtcaga-tttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctat 7465823  T
Q  114 gtatcat 120  Q
    |||||||    
T  7465824 gtatcat 7465830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 14 - 120
Target Start/End: Complemental strand, 28863565 - 28863460
Alignment:
Q  14 gagatgaaagagaaagtgtgcttgtgtgaggtccacgtgaccacgtgccatattttttgtgtgggtgtcaatagatgtattgccacctatggttgtctat 113  Q
    ||||| |||||||||||||||||||| | |||||||||||| ||||| || |||||| |||||||||||||  | |||||||||||||| || |||||||    
T  28863565 gagataaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagattttt-gtgtgggtgtcaaagggtgtattgccacctaagggtgtctat 28863467  T
Q  114 gtatcat 120  Q
    |||||||    
T  28863466 gtatcat 28863460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 20 - 120
Target Start/End: Original strand, 10249378 - 10249477
Alignment:
Q  20 aaagagaaagtgtgcttgtgtgaggtccacgtgaccacgtgccatattttttgtgtgggtgtcaatagatgtattgccacctatggttgtctatgtatca 119  Q
    |||||||||||||||||||| | |||||||||||| ||||| || ||||| |||||||||||||| || ||||||| |||||| || |||||||||||||    
T  10249378 aaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttt-tgtgtgggtgtcaaaaggtgtattgtcacctaagggtgtctatgtatca 10249476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 20 - 120
Target Start/End: Complemental strand, 13438447 - 13438348
Alignment:
Q  20 aaagagaaagtgtgcttgtgtgaggtccacgtgaccacgtgccatattttttgtgtgggtgtcaatagatgtattgccacctatggttgtctatgtatca 119  Q
    |||||||||||||||||||| | |||||||||||| ||||| || |||||| |||||||||||||  ||||||||| |||||| || |||||||||||||    
T  13438447 aaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagattttt-gtgtgggtgtcaaaggatgtattgtcacctaagggtgtctatgtatca 13438349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 12 - 120
Target Start/End: Original strand, 33436088 - 33436195
Alignment:
Q  12 atgagatgaaagagaaagtgtgcttgtgtgaggtccacgtgaccacgtgccatattttttgtgtgggtgtcaatagatgtattgccacctatggttgtct 111  Q
    |||||| ||||||||||||||||||||| | |||||||||||| |||||  | ||||| ||||||||||||||  | |||||||||||||| || |||||    
T  33436088 atgagaggaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgttagatttt-tgtgtgggtgtcaaagggtgtattgccacctaagggtgtct 33436186  T
Q  112 atgtatcat 120  Q
    |||||||||    
T  33436187 atgtatcat 33436195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 20 - 121
Target Start/End: Original strand, 40613898 - 40613998
Alignment:
Q  20 aaagagaaagtgtgcttgtgtgaggtccacgtgaccacgtgccatattttttgtgtgggtgtcaatagatgtattgccacctatggttgtctatgtatca 119  Q
    |||||||||||||||||||| | |||||| ||| ||||||| || ||||| ||||||||||||||  | |||||||||||||| || |||||||||||||    
T  40613898 aaagagaaagtgtgcttgtgcggggtccatgtggccacgtgtcagatttt-tgtgtgggtgtcaaagggtgtattgccacctaaggatgtctatgtatca 40613996  T
Q  120 ta 121  Q
    ||    
T  40613997 ta 40613998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 20 - 120
Target Start/End: Complemental strand, 9058584 - 9058485
Alignment:
Q  20 aaagagaaagtgtgcttgtgtgaggtccacgtgaccacgtgccatattttttgtgtgggtgtcaatagatgtattgccacctatggttgtctatgtatca 119  Q
    |||||||||||||||||||| | ||||||| |||| ||||| || |||||| |||||||||||||  | |||||||||||||| || |||||||||||||    
T  9058584 aaagagaaagtgtgcttgtgcggggtccacatgactacgtgtcagattttt-gtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatca 9058486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 24 - 120
Target Start/End: Original strand, 32505648 - 32505743
Alignment:
Q  24 agaaagtgtgcttgtgtgaggtccacgtgaccacgtgccatattttttgtgtgggtgtcaatagatgtattgccacctatggttgtctatgtatcat 120  Q
    |||||||||||||||| | |||||||||||| ||||| || ||||| |||||||||||||| || ||||||| |||||| || ||||||||||||||    
T  32505648 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttt-tgtgtgggtgtcaaaaggtgtattgtcacctaagggtgtctatgtatcat 32505743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 20 - 120
Target Start/End: Complemental strand, 40701582 - 40701483
Alignment:
Q  20 aaagagaaagtgtgcttgtgtgaggtccacgtgaccacgtgccatattttttgtgtgggtgtcaatagatgtattgccacctatggttgtctatgtatca 119  Q
    |||||||||||||| ||||| | ||||||||| || ||||| || |||||| ||||||||||||| || |||||||||||||| || |||||||||||||    
T  40701582 aaagagaaagtgtgattgtgcggggtccacgtaactacgtgtcagattttt-gtgtgggtgtcaaaaggtgtattgccacctaagggtgtctatgtatca 40701484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 20 - 121
Target Start/End: Complemental strand, 42257297 - 42257197
Alignment:
Q  20 aaagagaaagtgtgcttgtgtgaggtccacgtgaccacgtgccatattttttgtgtgggtgtcaatagatgtattgccacctatggttgtctatgtatca 119  Q
    |||||||||||||||||||| | |||||| ||| ||||||| || ||||||  ||||||||||||  ||||||||||||||||  | |||||||||||||    
T  42257297 aaagagaaagtgtgcttgtgcggggtccatgtggccacgtgtcagattttta-tgtgggtgtcaaatgatgtattgccacctaaagatgtctatgtatca 42257199  T
Q  120 ta 121  Q
    ||    
T  42257198 ta 42257197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 20 - 120
Target Start/End: Complemental strand, 17473124 - 17473025
Alignment:
Q  20 aaagagaaagtgtgcttgtgtgaggtccacgtgaccacgtgccatattttttgtgtgggtgtcaatagatgtattgccacctatggttgtctatgtatca 119  Q
    |||||||||||||||||||| | | |||||||||| ||||| || |||||| |||||||||||||  | |||||||||| ||| || |||||||||||||    
T  17473124 aaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagattttt-gtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatca 17473026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 20 - 120
Target Start/End: Original strand, 28381651 - 28381750
Alignment:
Q  20 aaagagaaagtgtgcttgtgtgaggtccacgtgaccacgtgccatattttttgtgtgggtgtcaatagatgtattgccacctatggttgtctatgtatca 119  Q
    |||||||||||||||||||| |  ||||| ||||| ||||| || ||||| |||||||||||| | || |||||||||||||| || |||||||||||||    
T  28381651 aaagagaaagtgtgcttgtgcggagtccatgtgactacgtgtcagatttt-tgtgtgggtgtcgaaaggtgtattgccacctaagggtgtctatgtatca 28381749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 19 - 121
Target Start/End: Original strand, 26891499 - 26891600
Alignment:
Q  19 gaaagagaaagtgtgcttgtgtgaggtccacgtgaccacgtgccatattttttgtgtgggtgtcaatagatgtattgccacctatggttgtctatgtatc 118  Q
    |||||||||| |||||||||  ||||||||||||||||| || || | |||||||||||||||| |  | |||||||||||||| || || |||||||||    
T  26891499 gaaagagaaaatgtgcttgttcgaggtccacgtgaccacatgtcaga-tttttgtgtgggtgtctaggggtgtattgccacctaagggtggctatgtatc 26891597  T
Q  119 ata 121  Q
    |||    
T  26891598 ata 26891600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 20 - 120
Target Start/End: Original strand, 5574484 - 5574583
Alignment:
Q  20 aaagagaaagtgtgcttgtgtgaggtccacgtgaccacgtgccatattttttgtgtgggtgtcaatagatgtattgccacctatggttgtctatgtatca 119  Q
    |||||||||||||||||||| | | |||||||||| ||||| || | ||||| ||||||||||||  | |||||||||||||| |  |||||||||||||    
T  5574484 aaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcaga-tttttatgtgggtgtcaaagggtgtattgccacctaagagtgtctatgtatca 5574582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 20 - 120
Target Start/End: Original strand, 19930816 - 19930915
Alignment:
Q  20 aaagagaaagtgtgcttgtgtgaggtccacgtgaccacgtgccatattttttgtgtgggtgtcaatagatgtattgccacctatggttgtctatgtatca 119  Q
    |||||||||||||| ||||| | ||||||| |||| ||||| || ||||| ||||||| ||||||  | |||||||||||||| || |||||||||||||    
T  19930816 aaagagaaagtgtgtttgtgcggggtccacatgactacgtgtcagatttt-tgtgtggatgtcaaagggtgtattgccacctaagggtgtctatgtatca 19930914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 20 - 120
Target Start/End: Complemental strand, 30915567 - 30915468
Alignment:
Q  20 aaagagaaagtgtgcttgtgtgaggtccacgtgaccacgtgccatattttttgtgtgggtgtcaatagatgtattgccacctatggttgtctatgtatca 119  Q
    |||||||||||||||||||  | |||||||||||| ||||| || | ||||| |||||| |||||  | |||||||||||||| || |||||||||||||    
T  30915567 aaagagaaagtgtgcttgtacggggtccacgtgactacgtgtcaga-tttttatgtgggggtcaaagggtgtattgccacctaagggtgtctatgtatca 30915469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 14 - 120
Target Start/End: Complemental strand, 20700925 - 20700820
Alignment:
Q  14 gagatgaaagagaaagtgtgcttgtgtgaggtccacgtgaccacgtgccatattttttgtgtgggtgtcaatagatgtattgccacctatggttgtctat 113  Q
    |||| |||||||||||||||||| || | |||||||||||| ||||| || | ||||||||| || |||||  | ||||||||||| || || |||||||    
T  20700925 gagaggaaagagaaagtgtgcttatgcggggtccacgtgactacgtgtcaga-tttttgtgtaggagtcaaagggtgtattgccacataaggatgtctat 20700827  T
Q  114 gtatcat 120  Q
    |||||||    
T  20700826 gtatcat 20700820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 120
Target Start/End: Complemental strand, 27864809 - 27864709
Alignment:
Q  19 gaaagagaaagtgtgcttgtgtgaggtccacgtgaccacgtgccatattttttgtgtgggtgtcaatagatgtattgccacctatggttgtctatgtatc 118  Q
    |||||||||||||||||| || | |||||||||||  ||||| || |||||| |||||| ||||||  | ||||||||||| || || ||||||||||||    
T  27864809 gaaagagaaagtgtgcttttgcggggtccacgtgattacgtgtcagattttt-gtgtggatgtcaaagggtgtattgccacataagggtgtctatgtatc 27864711  T
Q  119 at 120  Q
    ||    
T  27864710 at 27864709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 120
Target Start/End: Complemental strand, 33436316 - 33436216
Alignment:
Q  19 gaaagagaaagtgtgcttgtgtgaggtccacgtgaccacgtgccatattttttgtgtgggtgtcaatagatgtattgccacctatggttgtctatgtatc 118  Q
    |||||||||||||||||||||  | |||||| ||  |||||| || ||||||  |||||||||||| || |||||||||| ||| || ||||||||||||    
T  33436316 gaaagagaaagtgtgcttgtgcaaagtccacatggtcacgtgtcagattttta-tgtgggtgtcaaaaggtgtattgccatctaaggatgtctatgtatc 33436218  T
Q  119 at 120  Q
    ||    
T  33436217 at 33436216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 120
Target Start/End: Complemental strand, 41575248 - 41575142
Alignment:
Q  14 gagatgaaagagaaagtgtgcttgtgt-gaggtccacgtgaccacgtgccatattttttgtgtgggtgtcaatagatgtattgccacctatggttgtcta 112  Q
    ||||||||||||||||||||||||||| | ||||||| ||||||| || || | ||||||||||  ||||||  | |||||| ||| ||| || ||||||    
T  41575248 gagatgaaagagaaagtgtgcttgtgtaggggtccacatgaccacatgtca-aatttttgtgtgaatgtcaaagggtgtattaccatctaaggatgtcta 41575150  T
Q  113 tgtatcat 120  Q
    ||||||||    
T  41575149 tgtatcat 41575142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 19 - 121
Target Start/End: Complemental strand, 38732459 - 38732358
Alignment:
Q  19 gaaagagaaagtgtgcttgtgtgaggtccacgtgaccacgtgccatattttttgtgtgggtgtcaatagatgtattgccacctatggttgtctatgtatc 118  Q
    |||||||||||||| |||||| | ||||||  ||||||| || || |||||| |||||||||||||  ||||||||| ||| || || ||| ||||||||    
T  38732459 gaaagagaaagtgtacttgtgcggggtccatatgaccacatgtcagattttt-gtgtgggtgtcaagggatgtattgtcacataagggtgtttatgtatc 38732361  T
Q  119 ata 121  Q
    |||    
T  38732360 ata 38732358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 19 - 121
Target Start/End: Original strand, 45097730 - 45097831
Alignment:
Q  19 gaaagagaaagtgtgcttgtgtgaggtccacgtgaccacgtgccatattttttgtgtgggtgtcaatagatgtattgccacctatggttgtctatgtatc 118  Q
    |||||||||||||| |||||| | ||||||  || |||| || || |||||| || ||||||||||  |||||||||||||||| || ||| ||||||||    
T  45097730 gaaagagaaagtgtacttgtgcggggtccatatggccacatgtcagattttt-gtatgggtgtcaagggatgtattgccacctaaggatgtttatgtatc 45097828  T
Q  119 ata 121  Q
    |||    
T  45097829 ata 45097831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 20 - 121
Target Start/End: Complemental strand, 36168940 - 36168840
Alignment:
Q  20 aaagagaaagtgtgcttgtgtgaggtccacgtgaccacgtgccatattttttgtgtgggtgtcaatagatgtattgccacctatggttgtctatgtatca 119  Q
    ||||||||||| |||||||| | |||||| ||| ||||||| || |||||| ||||||| || ||  ||||||||| || ||| || |||||||||||||    
T  36168940 aaagagaaagtatgcttgtgcggggtccatgtggccacgtgtcaaattttt-gtgtgggagttaaaggatgtattgtcatctaaggatgtctatgtatca 36168842  T
Q  120 ta 121  Q
    ||    
T  36168841 ta 36168840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 120
Target Start/End: Complemental strand, 4060785 - 4060690
Alignment:
Q  24 agaaagtgtgcttgtgtgaggtccacgtgaccacgtgccatattttttgtgtgggtgtcaatagatgtattgccacctatggttgtctatgtatcat 120  Q
    ||||||||||||| || | | ||||||| || ||||| || |||||| |||||| |||||| || ||||||| |||||| || ||||||||||||||    
T  4060785 agaaagtgtgcttatgcgggatccacgtaactacgtgtcagattttt-gtgtggatgtcaaaaggtgtattgtcacctaagggtgtctatgtatcat 4060690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 14 - 121
Target Start/End: Complemental strand, 2533233 - 2533128
Alignment:
Q  14 gagatgaaagagaaagtgtgcttgtgtgaggtccacgtgaccacgtgccatattttttgtgtgggtgtcaatagatgtattgccacctatggttgtctat 113  Q
    ||||| ||||| |||||||||||||| | |||| | ||| | ||||| || |||||| |||||| ||||||  ||||||||||||| || || |||||||    
T  2533233 gagataaaagaaaaagtgtgcttgtgcggggtctatgtggctacgtgtcagattttt-gtgtgg-tgtcaaaggatgtattgccacttaaggatgtctat 2533136  T
Q  114 gtatcata 121  Q
    ||||||||    
T  2533135 gtatcata 2533128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 20 - 121
Target Start/End: Original strand, 38273138 - 38273238
Alignment:
Q  20 aaagagaaagtgtgcttgtgtgaggtccacgtgaccacgtgccatattttttgtgtgggtgtcaatagatgtattgccacctatggttgtctatgtatca 119  Q
    |||||||||||||||| ||| | |||||| ||| | ||||| || ||||| ||||||||||| ||  | |||||||||| ||| |  |||||||||||||    
T  38273138 aaagagaaagtgtgctagtgcggggtccatgtggctacgtgtcagatttt-tgtgtgggtgttaaagggtgtattgccatctaagaatgtctatgtatca 38273236  T
Q  120 ta 121  Q
    ||    
T  38273237 ta 38273238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 48
Target Start/End: Complemental strand, 17823900 - 17823864
Alignment:
Q  12 atgagatgaaagagaaagtgtgcttgtgtgaggtcca 48  Q
    ||||||||||||||||||||||||||| || ||||||    
T  17823900 atgagatgaaagagaaagtgtgcttgtatggggtcca 17823864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 55; Significance: 1e-22; HSPs: 27)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 14 - 120
Target Start/End: Original strand, 50052418 - 50052523
Alignment:
Q  14 gagatgaaagagaaagtgtgcttgtgtgaggtccacgtgaccacgtgccatattttttgtgtgggtgtcaatagatgtattgccacctatggttgtctat 113  Q
    |||| ||||||||||||||||||||| | |||||||||||| ||||| || ||||| ||||||||||||||  | |||||||||||||| || |||||||    
T  50052418 gagaggaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttt-tgtgtgggtgtcaaagggtgtattgccacctaaggatgtctat 50052516  T
Q  114 gtatcat 120  Q
    |||||||    
T  50052517 gtatcat 50052523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 20 - 120
Target Start/End: Complemental strand, 41236451 - 41236352
Alignment:
Q  20 aaagagaaagtgtgcttgtgtgaggtccacgtgaccacgtgccatattttttgtgtgggtgtcaatagatgtattgccacctatggttgtctatgtatca 119  Q
    |||||||||||||||||||| | |||||||||||| ||||| || |||||| |||||| |||||| || |||||||||||||| || |||||||||||||    
T  41236451 aaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagattttt-gtgtggatgtcaaaaggtgtattgccacctaagggtgtctatgtatca 41236353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 14 - 120
Target Start/End: Complemental strand, 29239996 - 29239891
Alignment:
Q  14 gagatgaaagagaaagtgtgcttgtgtgaggtccacgtgaccacgtgccatattttttgtgtgggtgtcaatagatgtattgccacctatggttgtctat 113  Q
    |||| ||||||||||||||||||||||| |||||||||||| |||||  | | ||||||||||| ||||||  | |||||||||||||| || |||||||    
T  29239996 gagaggaaagagaaagtgtgcttgtgtggggtccacgtgactacgtgttaga-tttttgtgtggatgtcaaatggtgtattgccacctaagggtgtctat 29239898  T
Q  114 gtatcat 120  Q
    |||||||    
T  29239897 gtatcat 29239891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 15 - 120
Target Start/End: Complemental strand, 29977994 - 29977890
Alignment:
Q  15 agatgaaagagaaagtgtgcttgtgtgaggtccacgtgaccacgtgccatattttttgtgtgggtgtcaatagatgtattgccacctatggttgtctatg 114  Q
    ||||||||||||||||||||||||||| ||||||  |||| ||||| || | ||||||||||||||| ||  | ||||||||||||||||||| | ||||    
T  29977994 agatgaaagagaaagtgtgcttgtgtggggtccatatgactacgtgtcaga-tttttgtgtgggtgttaaggggtgtattgccacctatggttctgtatg 29977896  T
Q  115 tatcat 120  Q
    ||||||    
T  29977895 tatcat 29977890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 20 - 120
Target Start/End: Original strand, 11511458 - 11511557
Alignment:
Q  20 aaagagaaagtgtgcttgtgtgaggtccacgtgaccacgtgccatattttttgtgtgggtgtcaatagatgtattgccacctatggttgtctatgtatca 119  Q
    |||||||||||||||||||| | |||||||||||| ||||| || | ||||| ||||||||||||  | |||||||||||||| || |||||||||||||    
T  11511458 aaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcaga-tttttatgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatca 11511556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 20 - 120
Target Start/End: Original strand, 42044363 - 42044462
Alignment:
Q  20 aaagagaaagtgtgcttgtgtgaggtccacgtgaccacgtgccatattttttgtgtgggtgtcaatagatgtattgccacctatggttgtctatgtatca 119  Q
    |||||||||||||||||||| | |||||||||||| ||||| || | |||||||||||||||  |  |||||||||||||||| || |||||||||||||    
T  42044363 aaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcaga-tttttgtgtgggtgtacaaggatgtattgccacctaagggtgtctatgtatca 42044461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 20 - 120
Target Start/End: Original strand, 48183045 - 48183144
Alignment:
Q  20 aaagagaaagtgtgcttgtgtgaggtccacgtgaccacgtgccatattttttgtgtgggtgtcaatagatgtattgccacctatggttgtctatgtatca 119  Q
    |||||||||||||||||||| | |||||||||||| ||||| || | ||||||||||||||||||  | ||||||||||| || || |||||||||||||    
T  48183045 aaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcaga-tttttgtgtgggtgtcaaagggtgtattgccacgtaagggtgtctatgtatca 48183143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 19 - 120
Target Start/End: Complemental strand, 3481759 - 3481659
Alignment:
Q  19 gaaagagaaagtgtgcttgtgtgaggtccacgtgaccacgtgccatattttttgtgtgggtgtcaataga-tgtattgccacctatggttgtctatgtat 117  Q
    ||||||||||||||||||||||| |||||||||||| | ||| || | |||||||||||||||||| ||| ||||||||||||||  | |||||||||||    
T  3481759 gaaagagaaagtgtgcttgtgtggggtccacgtgactatgtgtcaga-tttttgtgtgggtgtcaa-agagtgtattgccacctaaaggtgtctatgtat 3481662  T
Q  118 cat 120  Q
    |||    
T  3481661 cat 3481659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 20 - 120
Target Start/End: Original strand, 480443 - 480542
Alignment:
Q  20 aaagagaaagtgtgcttgtgtgaggtccacgtgaccacgtgccatattttttgtgtgggtgtcaatagatgtattgccacctatggttgtctatgtatca 119  Q
    |||||||||||||||||||  | |||||||||||| ||||| || ||||| ||||||||||||||  | ||||||| |||||| || |||||||||||||    
T  480443 aaagagaaagtgtgcttgtacggggtccacgtgactacgtgtcagatttt-tgtgtgggtgtcaaagggtgtattgtcacctaagggtgtctatgtatca 480541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 20 - 120
Target Start/End: Complemental strand, 6034148 - 6034049
Alignment:
Q  20 aaagagaaagtgtgcttgtgtgaggtccacgtgaccacgtgccatattttttgtgtgggtgtcaatagatgtattgccacctatggttgtctatgtatca 119  Q
    |||||||||||||||||||| | | |||||||||| || || || |||||| |||||||||||||  | |||||||||||||| || |||||||||||||    
T  6034148 aaagagaaagtgtgcttgtgcgggatccacgtgactacatgtcagattttt-gtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatca 6034050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 14 - 121
Target Start/End: Complemental strand, 29535486 - 29535381
Alignment:
Q  14 gagatgaaagagaaagtgtgcttgtgtgaggtccacgtgaccacgtgccatattttttgtgtgggtgtcaatagatgtattgccacctatggttgtctat 113  Q
    |||||||||||||||||||| ||||||| | |||||||| ||| ||| |||| ||||||||||| |  ||| |||||||||| |||||| | ||||||||    
T  29535486 gagatgaaagagaaagtgtgtttgtgtgggatccacgtggccatgtg-cata-tttttgtgtggataccaagagatgtattgtcacctaagattgtctat 29535389  T
Q  114 gtatcata 121  Q
    ||||||||    
T  29535388 gtatcata 29535381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 20 - 120
Target Start/End: Original strand, 54473529 - 54473628
Alignment:
Q  20 aaagagaaagtgtgcttgtgtgaggtccacgtgaccacgtgccatattttttgtgtgggtgtcaatagatgtattgccacctatggttgtctatgtatca 119  Q
    ||||| |||||||||||||| | |||||||||||| |||||  | ||||| ||||||||||||||  | ||||||| |||||| || |||||||||||||    
T  54473529 aaagataaagtgtgcttgtgcggggtccacgtgactacgtgttagatttt-tgtgtgggtgtcaaatggtgtattgtcacctaagggtgtctatgtatca 54473627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 14 - 120
Target Start/End: Complemental strand, 23608345 - 23608240
Alignment:
Q  14 gagatgaaagagaaagtgtgcttgtgtgaggtccacgtgaccacgtgccatattttttgtgtgggtgtcaatagatgtattgccacctatggttgtctat 113  Q
    ||||| ||||||||||||||||||||||  || |||||||| ||||| || | ||||||||||||||||||  | ||||||| || ||| || |||||||    
T  23608345 gagataaaagagaaagtgtgcttgtgtggagttcacgtgactacgtgtcaga-tttttgtgtgggtgtcaaatggtgtattgtcatctaagggtgtctat 23608247  T
Q  114 gtatcat 120  Q
     ||||||    
T  23608246 atatcat 23608240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 14 - 120
Target Start/End: Original strand, 50526161 - 50526266
Alignment:
Q  14 gagatgaaagagaaagtgtgcttgtgtgaggtccacgtgaccacgtgccatattttttgtgtgggtgtcaatagatgtattgccacctatggttgtctat 113  Q
    |||| |||| |||||| ||||||||| |   |||||||||||||||| || ||||| ||||||||||||||  | ||||||||||||||  | |||||||    
T  50526161 gagaggaaatagaaagcgtgcttgtgcggaatccacgtgaccacgtgtcagatttt-tgtgtgggtgtcaaagggtgtattgccacctaaagatgtctat 50526259  T
Q  114 gtatcat 120  Q
    |||||||    
T  50526260 gtatcat 50526266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 20 - 120
Target Start/End: Original strand, 29234241 - 29234340
Alignment:
Q  20 aaagagaaagtgtgcttgtgtgaggtccacgtgaccacgtgccatattttttgtgtgggtgtcaatagatgtattgccacctatggttgtctatgtatca 119  Q
    |||||||||||||||||||| | |||||||||||| ||||| || | ||||||||  ||| ||||  | |||||||||| ||| || |||||||||||||    
T  29234241 aaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcaga-tttttgtgaaggtatcaaagggtgtattgccatctaagggtgtctatgtatca 29234339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 117
Target Start/End: Original strand, 28480258 - 28480360
Alignment:
Q  14 gagatgaaagagaaagtgtgcttgtgtgaggtccacgtgaccacgtgccatattttttgtgtgggtgtcaatagatgtattgccacctatggttgtctat 113  Q
    |||||||| ||||||||||| ||||||| ||||||| |||| || || || | |||||||||| |||| || |  ||||||| |||||| ||||||||||    
T  28480258 gagatgaaggagaaagtgtgtttgtgtggggtccacatgactacatgtcaga-tttttgtgtgagtgttaagaagtgtattgtcacctaaggttgtctat 28480356  T
Q  114 gtat 117  Q
    ||||    
T  28480357 gtat 28480360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 117
Target Start/End: Original strand, 28481133 - 28481235
Alignment:
Q  14 gagatgaaagagaaagtgtgcttgtgtgaggtccacgtgaccacgtgccatattttttgtgtgggtgtcaatagatgtattgccacctatggttgtctat 113  Q
    |||||||| ||||||||||| ||||||| ||||||| |||| || || || | |||||||||| |||| || |  ||||||| |||||| ||||||||||    
T  28481133 gagatgaaggagaaagtgtgtttgtgtggggtccacatgactacatgtcaga-tttttgtgtgagtgttaagaagtgtattgtcacctaaggttgtctat 28481231  T
Q  114 gtat 117  Q
    ||||    
T  28481232 gtat 28481235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 117
Target Start/End: Original strand, 28482008 - 28482110
Alignment:
Q  14 gagatgaaagagaaagtgtgcttgtgtgaggtccacgtgaccacgtgccatattttttgtgtgggtgtcaatagatgtattgccacctatggttgtctat 113  Q
    |||||||| ||||||||||| ||||||| ||||||| |||| || || || | |||||||||| |||| || |  ||||||| |||||| ||||||||||    
T  28482008 gagatgaaggagaaagtgtgtttgtgtggggtccacatgactacatgtcaga-tttttgtgtgagtgttaagaagtgtattgtcacctaaggttgtctat 28482106  T
Q  114 gtat 117  Q
    ||||    
T  28482107 gtat 28482110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 67 - 121
Target Start/End: Original strand, 29548001 - 29548055
Alignment:
Q  67 tttttgtgtgggtgtcaatagatgtattgccacctatggttgtctatgtatcata 121  Q
    ||||||||||||||||||  |||||||||||||||| || ||| |||||||||||    
T  29548001 tttttgtgtgggtgtcaagggatgtattgccacctaaggatgtttatgtatcata 29548055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 20 - 121
Target Start/End: Complemental strand, 31910296 - 31910196
Alignment:
Q  20 aaagagaaagtgtgcttgtgtgaggtccacgtgaccacgtgccatattttttgtgtgggtgtcaataga-tgtattgccacctatggttgtctatgtatc 118  Q
    |||||||||||||||||||| | |||||| ||| | | ||| || |||||| ||||||||||||| ||| ||||||| |||||| || ||||||||||||    
T  31910296 aaagagaaagtgtgcttgtgcggggtccatgtggctatgtgtcagattttt-gtgtgggtgtcaa-agagtgtattgtcacctaaggatgtctatgtatc 31910199  T
Q  119 ata 121  Q
    |||    
T  31910198 ata 31910196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 19 - 121
Target Start/End: Complemental strand, 47986313 - 47986212
Alignment:
Q  19 gaaagagaaagtgtgcttgtgtgaggtccacgtgaccacgtgccatattttttgtgtgggtgtcaatagatgtattgccacctatggttgtctatgtatc 118  Q
    |||||||||||||| |||||| | ||||||  || |||| || || |||||| |||||| ||||||  |||||||||||||||| || ||| ||||||||    
T  47986313 gaaagagaaagtgtacttgtgcggggtccatatggccacatgtcagattttt-gtgtggatgtcaagggatgtattgccacctaagggtgtttatgtatc 47986215  T
Q  119 ata 121  Q
    |||    
T  47986214 ata 47986212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 120
Target Start/End: Original strand, 24995103 - 24995202
Alignment:
Q  20 aaagagaaagtgtgcttgtgtgaggtccacgtgaccacgtgccatattttttgtgtgggtgtcaatagatgtattgccacctatggttgtctatgtatca 119  Q
    ||||||||| |||||||||| | |||||||||||| ||||| || | ||||| ||||||||||||  | |||||||||| ||| || |||| || |||||    
T  24995103 aaagagaaaatgtgcttgtgcggggtccacgtgactacgtgtca-aatttttatgtgggtgtcaaagggtgtattgccatctaagggtgtccatatatca 24995201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 19 - 121
Target Start/End: Original strand, 55079708 - 55079810
Alignment:
Q  19 gaaagagaaagtgtgcttgtgt-gaggtccacgtgaccacgtgccatattttttgtgtgggtgtcaatagatgtattgccacctatggttgtctatgtat 117  Q
    |||||||||||||| ||||||| | ||||||  || |||| || || | ||||||| |||||||||| || |||||||||||||| || ||| |||||||    
T  55079708 gaaagagaaagtgtacttgtgtgggggtccatatggccacatgtcaga-tttttgtatgggtgtcaagaggtgtattgccacctaagggtgtttatgtat 55079806  T
Q  118 cata 121  Q
    ||||    
T  55079807 cata 55079810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 121
Target Start/End: Original strand, 19670711 - 19670812
Alignment:
Q  19 gaaagagaaagtgtgcttgtgtgaggtccacgtgaccacgtgccatattttttgtgtgggtgtcaatagatgtattgccacctatggttgtctatgtatc 118  Q
    |||||||||||||| |||||| | ||||||  || |||| || || |||||| ||||| |||||||  | |||||||||||||| || ||| ||||||||    
T  19670711 gaaagagaaagtgtacttgtgcggggtccatatggccacatgtcagattttt-gtgtgagtgtcaaggggtgtattgccacctaagggtgtttatgtatc 19670809  T
Q  119 ata 121  Q
    |||    
T  19670810 ata 19670812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 67 - 121
Target Start/End: Complemental strand, 40574837 - 40574783
Alignment:
Q  67 tttttgtgtgggtgtcaatagatgtattgccacctatggttgtctatgtatcata 121  Q
    ||||||||||||||||||  | |||||| ||||||| || |||||||||||||||    
T  40574837 tttttgtgtgggtgtcaaagggtgtattaccacctaaggatgtctatgtatcata 40574783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 67 - 121
Target Start/End: Complemental strand, 55475249 - 55475195
Alignment:
Q  67 tttttgtgtgggtgtcaatagatgtattgccacctatggttgtctatgtatcata 121  Q
    ||||||||||||||||||  | |||||||||||||| || ||| |||||||||||    
T  55475249 tttttgtgtgggtgtcaaagggtgtattgccacctaaggatgtttatgtatcata 55475195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 20 - 81
Target Start/End: Complemental strand, 41823986 - 41823926
Alignment:
Q  20 aaagagaaagtgtgcttgtgtgaggtccacgtgaccacgtgccatattttttgtgtgggtgt 81  Q
    |||||||||||||||||||| | |||||| ||||| ||||| || | |||||||||||||||    
T  41823986 aaagagaaagtgtgcttgtgcggggtccatgtgactacgtgtcaga-tttttgtgtgggtgt 41823926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 54; Significance: 4e-22; HSPs: 26)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 15 - 120
Target Start/End: Original strand, 14623830 - 14623934
Alignment:
Q  15 agatgaaagagaaagtgtgcttgtgtgaggtccacgtgaccacgtgccatattttttgtgtgggtgtcaatagatgtattgccacctatggttgtctatg 114  Q
    ||||||||||||||||||||||||||||||||||| ||| ||| || || | ||||| ||||||||||||  | |||||||||||||| || ||||||||    
T  14623830 agatgaaagagaaagtgtgcttgtgtgaggtccacatgaacacatgtcaga-tttttatgtgggtgtcaaggggtgtattgccacctaaggatgtctatg 14623928  T
Q  115 tatcat 120  Q
    ||||||    
T  14623929 tatcat 14623934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 20 - 121
Target Start/End: Original strand, 26141528 - 26141628
Alignment:
Q  20 aaagagaaagtgtgcttgtgtgaggtccacgtgaccacgtgccatattttttgtgtgggtgtcaatagatgtattgccacctatggttgtctatgtatca 119  Q
    |||||||||||||||||||||| |||||| ||||||||||| || | ||||||||||||||| ||  | |||||||||||||| || |||||||||||||    
T  26141528 aaagagaaagtgtgcttgtgtggggtccatgtgaccacgtgtcaga-tttttgtgtgggtgttaaagggtgtattgccacctaaggatgtctatgtatca 26141626  T
Q  120 ta 121  Q
    ||    
T  26141627 ta 26141628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 20 - 120
Target Start/End: Complemental strand, 17470509 - 17470410
Alignment:
Q  20 aaagagaaagtgtgcttgtgtgaggtccacgtgaccacgtgccatattttttgtgtgggtgtcaatagatgtattgccacctatggttgtctatgtatca 119  Q
    |||||||||||||||||||||| |||||||||||| ||||| || | ||||||||||||||| || || ||||||||||||||  | |||||||||||||    
T  17470509 aaagagaaagtgtgcttgtgtggggtccacgtgactacgtgtcaga-tttttgtgtgggtgttaaaaggtgtattgccacctaaaggtgtctatgtatca 17470411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 20 - 120
Target Start/End: Complemental strand, 49607518 - 49607419
Alignment:
Q  20 aaagagaaagtgtgcttgtgtgaggtccacgtgaccacgtgccatattttttgtgtgggtgtcaatagatgtattgccacctatggttgtctatgtatca 119  Q
    |||||||||||||||||||||| | |||||||||| ||||| || |||||| |||||||||||||  | |||||||||||||| || |||||||||||||    
T  49607518 aaagagaaagtgtgcttgtgtgggatccacgtgactacgtgtcagattttt-gtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatca 49607420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 20 - 120
Target Start/End: Complemental strand, 53982115 - 53982016
Alignment:
Q  20 aaagagaaagtgtgcttgtgtgaggtccacgtgaccacgtgccatattttttgtgtgggtgtcaatagatgtattgccacctatggttgtctatgtatca 119  Q
    |||||||||||||||||||| | |||||||||||| ||||| || |||||| |||||||||||||  | |||||||||||||| || |||||||||||||    
T  53982115 aaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagattttt-gtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatca 53982017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 14 - 120
Target Start/End: Original strand, 25407137 - 25407243
Alignment:
Q  14 gagatgaaagagaaagtgtgcttgtgtgaggtccacgtgaccacgtgccatattttttgtgtgggtgtcaatagatgtattgccacctatggttgtctat 113  Q
    |||||||||||||||||||| ||||||| | ||||  ||| |||||| || |||||||||||| |||||||  | | ||||||||||||||||||| |||    
T  25407137 gagatgaaagagaaagtgtgtttgtgtgggatccatatgatcacgtgtcagattttttgtgtgtgtgtcaaggggtatattgccacctatggttgtgtat 25407236  T
Q  114 gtatcat 120  Q
    |||||||    
T  25407237 gtatcat 25407243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 15 - 120
Target Start/End: Complemental strand, 8956871 - 8956767
Alignment:
Q  15 agatgaaagagaaagtgtgcttgtgtgaggtccacgtgaccacgtgccatattttttgtgtgggtgtcaatagatgtattgccacctatggttgtctatg 114  Q
    ||||||||||| |||||||||||||| |||||||| ||| |||||| || | ||||| ||||||||||||  ||||||||||||| || || ||||||||    
T  8956871 agatgaaagaggaagtgtgcttgtgtaaggtccacatgaacacgtgtcaca-tttttatgtgggtgtcaaaggatgtattgccacataaggatgtctatg 8956773  T
Q  115 tatcat 120  Q
    ||||||    
T  8956772 tatcat 8956767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 15 - 120
Target Start/End: Original strand, 13898046 - 13898150
Alignment:
Q  15 agatgaaagagaaagtgtgcttgtgtgaggtccacgtgaccacgtgccatattttttgtgtgggtgtcaatagatgtattgccacctatggttgtctatg 114  Q
    ||||||||||||||||||||||||||||||||||| ||| |||||| || | ||||| ||||||||||||  | |||||||||||||| || ||| |||     
T  13898046 agatgaaagagaaagtgtgcttgtgtgaggtccacatgaacacgtgtcaga-tttttatgtgggtgtcaaggggtgtattgccacctaaggatgtttatc 13898144  T
Q  115 tatcat 120  Q
    ||||||    
T  13898145 tatcat 13898150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 15 - 120
Target Start/End: Complemental strand, 35536735 - 35536631
Alignment:
Q  15 agatgaaagagaaagtgtgcttgtgtgaggtccacgtgaccacgtgccatattttttgtgtgggtgtcaatagatgtattgccacctatggttgtctatg 114  Q
    ||||||||||| |||||||||||||| |||||||| |||||||||| || | ||||| ||||||||||||  | ||||||||||| || || ||||||||    
T  35536735 agatgaaagaggaagtgtgcttgtgtaaggtccacatgaccacgtgtcaca-tttttatgtgggtgtcaaatggtgtattgccacataaggatgtctatg 35536637  T
Q  115 tatcat 120  Q
    ||||||    
T  35536636 tatcat 35536631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 20 - 121
Target Start/End: Complemental strand, 52629404 - 52629304
Alignment:
Q  20 aaagagaaagtgtgcttgtgtgaggtccacgtgaccacgtgccatattttttgtgtgggtgtcaatagatgtattgccacctatggttgtctatgtatca 119  Q
    |||||||||||||||||||  | |||||||||||| ||||| || |||||| |||||||||||||  | |||||||||||||| || |||||||||||||    
T  52629404 aaagagaaagtgtgcttgtacggggtccacgtgactacgtgtcagattttt-gtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatca 52629306  T
Q  120 ta 121  Q
    ||    
T  52629305 ta 52629304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 20 - 120
Target Start/End: Complemental strand, 31456793 - 31456694
Alignment:
Q  20 aaagagaaagtgtgcttgtgtgaggtccacgtgaccacgtgccatattttttgtgtgggtgtcaatagatgtattgccacctatggttgtctatgtatca 119  Q
    |||||||||||||||||||| | ||||||| |||| ||||| || |||||| |||||||||||||  | ||||||||| ||||||| |||||||||||||    
T  31456793 aaagagaaagtgtgcttgtgcggggtccacatgactacgtgtcagattttt-gtgtgggtgtcaaagggtgtattgccgcctatgggtgtctatgtatca 31456695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 20 - 120
Target Start/End: Complemental strand, 33644304 - 33644205
Alignment:
Q  20 aaagagaaagtgtgcttgtgtgaggtccacgtgaccacgtgccatattttttgtgtgggtgtcaatagatgtattgccacctatggttgtctatgtatca 119  Q
    |||||||||||||||||||| | |||||||||||| ||||| || | ||||||||||||||||||  | |||||||||||| | || |||||||||||||    
T  33644304 aaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcaga-tttttgtgtgggtgtcaaagggtgtattgccacccaagggtgtctatgtatca 33644206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 20 - 120
Target Start/End: Original strand, 54868891 - 54868990
Alignment:
Q  20 aaagagaaagtgtgcttgtgtgaggtccacgtgaccacgtgccatattttttgtgtgggtgtcaatagatgtattgccacctatggttgtctatgtatca 119  Q
    |||||||||||||| ||||| | ||||||||| || ||||| || ||||| |||||||||||||| || |||||||||||||| || |||||||||||||    
T  54868891 aaagagaaagtgtgattgtgcggggtccacgtaactacgtgtcagatttt-tgtgtgggtgtcaaaaggtgtattgccacctaagggtgtctatgtatca 54868989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 20 - 121
Target Start/End: Original strand, 41189760 - 41189860
Alignment:
Q  20 aaagagaaagtgtgcttgtgtgaggtccacgtgaccacgtgccatattttttgtgtgggtgtcaatagatgtattgccacctatggttgtctatgtatca 119  Q
    |||||||||||||||||||| | |||||| ||| ||||||| || ||||||  ||||||||||||  |||||||||||||||| || ||| |||||||||    
T  41189760 aaagagaaagtgtgcttgtgcggggtccatgtggccacgtgtcaaattttta-tgtgggtgtcaaatgatgtattgccacctaaggatgtatatgtatca 41189858  T
Q  120 ta 121  Q
    ||    
T  41189859 ta 41189860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 14 - 120
Target Start/End: Complemental strand, 8076503 - 8076398
Alignment:
Q  14 gagatgaaagagaaagtgtgcttgtgtgaggtccacgtgaccacgtgccatattttttgtgtgggtgtcaatagatgtattgccacctatggttgtctat 113  Q
    |||| ||||||||||||||||||||| | |||||||||||| |||||  | | ||||||||||||||||||  | |||| ||||||||| || ||| |||    
T  8076503 gagaggaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgttaga-tttttgtgtgggtgtcaaagggtgtactgccacctaagggtgtttat 8076405  T
Q  114 gtatcat 120  Q
    |||||||    
T  8076404 gtatcat 8076398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 14 - 120
Target Start/End: Original strand, 24699944 - 24700049
Alignment:
Q  14 gagatgaaagagaaagtgtgcttgtgtgaggtccacgtgaccacgtgccatattttttgtgtgggtgtcaatagatgtattgccacctatggttgtctat 113  Q
    |||| ||||||||||||||| ||||    |||||||||| |||||||||| ||||||  |||||||||||| || |||||||||| ||| || |||||||    
T  24699944 gagaggaaagagaaagtgtgtttgtacagggtccacgtggccacgtgccagattttta-tgtgggtgtcaaaaggtgtattgccaactaaggatgtctat 24700042  T
Q  114 gtatcat 120  Q
    |||||||    
T  24700043 gtatcat 24700049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 21 - 120
Target Start/End: Original strand, 27714888 - 27714986
Alignment:
Q  21 aagagaaagtgtgcttgtgtgaggtccacgtgaccacgtgccatattttttgtgtgggtgtcaatagatgtattgccacctatggttgtctatgtatcat 120  Q
    ||||||||||||||||||| | ||||||| |||| ||||| || | ||||||||||||||||||  | |||||| |||||||  | ||||||||||||||    
T  27714888 aagagaaagtgtgcttgtgcggggtccacatgactacgtgtcaga-tttttgtgtgggtgtcaaagggtgtattaccacctaaaggtgtctatgtatcat 27714986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 14 - 121
Target Start/End: Original strand, 33118841 - 33118947
Alignment:
Q  14 gagatgaaagagaaagtgtgcttgtgtgaggtccacgtgaccacgtgccatattttttgtgtgggtgtcaatagatgtattgccacctatggttgtctat 113  Q
    |||| ||||||||||||||| || || | | |||||||||| ||||| || ||||| ||||||||||||||  | ||||||| |||||| || |||||||    
T  33118841 gagaggaaagagaaagtgtgtttctgagggatccacgtgactacgtgtcaaatttt-tgtgtgggtgtcaaagggtgtattgtcacctaagggtgtctat 33118939  T
Q  114 gtatcata 121  Q
    ||||||||    
T  33118940 gtatcata 33118947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 20 - 121
Target Start/End: Original strand, 11347918 - 11348018
Alignment:
Q  20 aaagagaaagtgtgcttgtgtgaggtccacgtgaccacgtgccatattttttgtgtgggtgtcaatagatgtattgccacctatggttgtctatgtatca 119  Q
    ||||||||||||||||| ||   |||||| ||| ||||||| || ||||| ||||||| ||||||  ||||||||| |||||| || |||||||||||||    
T  11347918 aaagagaaagtgtgcttatgcagggtccatgtggccacgtgtcagatttt-tgtgtggatgtcaaaggatgtattgtcacctaaggatgtctatgtatca 11348016  T
Q  120 ta 121  Q
    ||    
T  11348017 ta 11348018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 20 - 121
Target Start/End: Original strand, 51419356 - 51419456
Alignment:
Q  20 aaagagaaagtgtgcttgtgtgaggtccacgtgaccacgtgccatattttttgtgtgggtgtcaatagatgtattgccacctatggttgtctatgtatca 119  Q
    |||||||||||||||||||| | |||| | ||| ||||||| || ||||| ||||||||||| ||  ||||||||| || ||| || |||||||||||||    
T  51419356 aaagagaaagtgtgcttgtgcggggtctatgtggccacgtgtcagatttt-tgtgtgggtgttaaaggatgtattgtcatctaaggatgtctatgtatca 51419454  T
Q  120 ta 121  Q
    ||    
T  51419455 ta 51419456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 12 - 120
Target Start/End: Original strand, 30801721 - 30801828
Alignment:
Q  12 atgagatgaaagagaaagtgtgcttgtgtgaggtccacgtgaccacgtgccatattttttgtgtgggtgtcaatagatgtattgccacctatggttgtct 111  Q
    |||||| |||||||||| |||||||||||| ||||||  |||| || || |||| ||||||||||||| ||||  | ||||||  |||||| || |||||    
T  30801721 atgagaggaaagagaaaatgtgcttgtgtggggtccatatgactacatgtcata-tttttgtgtgggtatcaaagggtgtattatcacctaagggtgtct 30801819  T
Q  112 atgtatcat 120  Q
    |||||||||    
T  30801820 atgtatcat 30801828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 121
Target Start/End: Complemental strand, 26754805 - 26754699
Alignment:
Q  14 gagatgaaagagaaagtgtgcttgtgtgaggtccacgtgaccacgtgccatattttttgtgtgggtgtcaatagatgtattgccacctatggttgtctat 113  Q
    |||| |||||||||| |||||||||| | |||||| |||||||| || || |||||| |||||| |||| |  | |||||||||||||| || |||||||    
T  26754805 gagaggaaagagaaaatgtgcttgtgcggggtccatgtgaccacatgtcagattttt-gtgtggatgtccaagggtgtattgccacctaagggtgtctat 26754707  T
Q  114 gtatcata 121  Q
    | ||||||    
T  26754706 gaatcata 26754699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 67 - 120
Target Start/End: Original strand, 11095395 - 11095448
Alignment:
Q  67 tttttgtgtgggtgtcaatagatgtattgccacctatggttgtctatgtatcat 120  Q
    ||||||||||||||||||  | |||||||||||||| || ||||||||||||||    
T  11095395 tttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcat 11095448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 120
Target Start/End: Original strand, 48587087 - 48587186
Alignment:
Q  20 aaagagaaagtgtgcttgtgtgaggtccacgtgaccacgtgccatattttttgtgtgggtgtcaatagatgtattgccacctatggttgtctatgtatca 119  Q
    ||||||||||||| |||||| | | |||||||||| ||||| || | ||||| ||| ||||||||  | |||||||||||||| || | |||||||||||    
T  48587087 aaagagaaagtgtacttgtgcgggatccacgtgactacgtgtcaga-tttttatgtaggtgtcaaagggtgtattgccacctaagggtatctatgtatca 48587185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 121
Target Start/End: Original strand, 20764911 - 20765011
Alignment:
Q  20 aaagagaaagtgtgcttgtgtgaggtccacgtgaccacgtgccatattttttgtgtgggtgtcaataga-tgtattgccacctatggttgtctatgtatc 118  Q
    |||||||||||||||||||  | |||||| ||| ||||||| || | ||||||||||||||| || ||| |||||| ||||||| || ||||||||| ||    
T  20764911 aaagagaaagtgtgcttgtacggggtccatgtggccacgtgtcaga-tttttgtgtgggtgttaa-agagtgtattaccacctaaggatgtctatgtctc 20765008  T
Q  119 ata 121  Q
    |||    
T  20765009 ata 20765011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 20 - 121
Target Start/End: Complemental strand, 47531969 - 47531869
Alignment:
Q  20 aaagagaaagtgtgcttgtgtgaggtccacgtgaccacgtgccatattttttgtgtgggtgtcaatagatgtattgccacctatggttgtctatgtatca 119  Q
    |||||||||||||||||||| | ||| ||  || ||||||| || ||| || |||||| ||| || || |||||||||| ||| || |||||||||||||    
T  47531969 aaagagaaagtgtgcttgtgcggggttcatatggccacgtgtcagattctt-gtgtggatgttaaaaggtgtattgccatctaaggatgtctatgtatca 47531871  T
Q  120 ta 121  Q
    ||    
T  47531870 ta 47531869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 53; Significance: 2e-21; HSPs: 22)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 20 - 120
Target Start/End: Original strand, 27564731 - 27564830
Alignment:
Q  20 aaagagaaagtgtgcttgtgtgaggtccacgtgaccacgtgccatattttttgtgtgggtgtcaatagatgtattgccacctatggttgtctatgtatca 119  Q
    |||||||||||||||||||| | |||||||||||  ||||| || ||||| |||||||||||||| || |||||||||||||| || |||||||||||||    
T  27564731 aaagagaaagtgtgcttgtgcggggtccacgtgattacgtgtcagatttt-tgtgtgggtgtcaaaaggtgtattgccacctaaggatgtctatgtatca 27564829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 20 - 121
Target Start/End: Complemental strand, 32813351 - 32813251
Alignment:
Q  20 aaagagaaagtgtgcttgtgtgaggtccacgtgaccacgtgccatattttttgtgtgggtgtcaatagatgtattgccacctatggttgtctatgtatca 119  Q
    |||||||||||||||||||| | |||||| ||||||||||| || |||||| |||||||||| ||  | |||||||||||||| || |||||||||||||    
T  32813351 aaagagaaagtgtgcttgtgcggggtccatgtgaccacgtgtcagattttt-gtgtgggtgttaaagggtgtattgccacctaaggatgtctatgtatca 32813253  T
Q  120 ta 121  Q
    ||    
T  32813252 ta 32813251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 24 - 120
Target Start/End: Complemental strand, 2582015 - 2581920
Alignment:
Q  24 agaaagtgtgcttgtgtgaggtccacgtgaccacgtgccatattttttgtgtgggtgtcaatagatgtattgccacctatggttgtctatgtatcat 120  Q
    |||||||||||||||| | |||||||||||| ||||| || |||||| |||||||||||||  | |||||||||||||| || ||||||||||||||    
T  2582015 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagattttt-gtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcat 2581920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 20 - 120
Target Start/End: Original strand, 9474872 - 9474971
Alignment:
Q  20 aaagagaaagtgtgcttgtgtgaggtccacgtgaccacgtgccatattttttgtgtgggtgtcaatagatgtattgccacctatggttgtctatgtatca 119  Q
    |||||||||||||| ||||| | |||||||||||| ||||| || ||||| ||||||||||||||  | |||||||||||||| || |||||||||||||    
T  9474872 aaagagaaagtgtgtttgtgcggggtccacgtgactacgtgtcagatttt-tgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatca 9474970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 12 - 121
Target Start/End: Complemental strand, 44454091 - 44453983
Alignment:
Q  12 atgagatgaaagagaaagtgtgcttgtgtgaggtccacgtgaccacgtgccatattttttgtgtgggtgtcaatagatgtattgccacctatggttgtct 111  Q
    |||||| |||||| |||||||||||||||| | ||||||| ||||| || || |||||| |||||||| |||| |||||||||||||| ||  | |||||    
T  44454091 atgagaggaaagaaaaagtgtgcttgtgtgggatccacgtaaccacatgtcagattttt-gtgtgggtatcaagagatgtattgccacttaaaggtgtct 44453993  T
Q  112 atgtatcata 121  Q
    ||||||||||    
T  44453992 atgtatcata 44453983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 20 - 120
Target Start/End: Complemental strand, 3000423 - 3000324
Alignment:
Q  20 aaagagaaagtgtgcttgtgtgaggtccacgtgaccacgtgccatattttttgtgtgggtgtcaatagatgtattgccacctatggttgtctatgtatca 119  Q
    |||||||||||||||||||  | |||||||||||| ||||| || |||||| |||||||||||||  | |||||||||||||| || ||| |||||||||    
T  3000423 aaagagaaagtgtgcttgtacggggtccacgtgactacgtgtcagattttt-gtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatca 3000325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 20 - 120
Target Start/End: Original strand, 38632317 - 38632416
Alignment:
Q  20 aaagagaaagtgtgcttgtgtgaggtccacgtgaccacgtgccatattttttgtgtgggtgtcaatagatgtattgccacctatggttgtctatgtatca 119  Q
    ||||| |||||||||||||| | |||||||||||| ||||| || ||||| ||||||| ||| || || |||||||||||||| || |||||||||||||    
T  38632317 aaagaaaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttt-tgtgtggatgttaaaaggtgtattgccacctaagggtgtctatgtatca 38632415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 20 - 120
Target Start/End: Original strand, 44548372 - 44548471
Alignment:
Q  20 aaagagaaagtgtgcttgtgtgaggtccacgtgaccacgtgccatattttttgtgtgggtgtcaatagatgtattgccacctatggttgtctatgtatca 119  Q
    |||||||||||||||||||| | |||||||||||| ||||| || | ||||||||||||| ||||  | ||||||||||||||  | |||||||||||||    
T  44548372 aaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcaga-tttttgtgtgggtatcaaatggtgtattgccacctaaagatgtctatgtatca 44548470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 20 - 120
Target Start/End: Original strand, 48716278 - 48716377
Alignment:
Q  20 aaagagaaagtgtgcttgtgtgaggtccacgtgaccacgtgccatattttttgtgtgggtgtcaatagatgtattgccacctatggttgtctatgtatca 119  Q
    ||||| |||||||||||||| | |||||||||||| ||||| || ||||| ||||||| ||||||  | |||||||||||||| || |||||||||||||    
T  48716278 aaagataaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttt-tgtgtggatgtcaaatggtgtattgccacctaagggtgtctatgtatca 48716376  T

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Target: chr1; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 20 - 120
Target Start/End: Complemental strand, 50630562 - 50630463
Alignment:
Q  20 aaagagaaagtgtgcttgtgtgaggtccacgtgaccacgtgccatattttttgtgtgggtgtcaatagatgtattgccacctatggttgtctatgtatca 119  Q
    |||||||||||||||||||| | |||||||||||| ||||| || | |||||||||||||  |||  |||||||||||||||| || | |||||||||||    
T  50630562 aaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcaga-tttttgtgtgggtaacaaaggatgtattgccacctaagggtatctatgtatca 50630464  T

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Target: chr1; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 14 - 120
Target Start/End: Original strand, 51898673 - 51898778
Alignment:
Q  14 gagatgaaagagaaagtgtgcttgtgtgaggtccacgtgaccacgtgccatattttttgtgtgggtgtcaatagatgtattgccacctatggttgtctat 113  Q
    |||| |||| |||||||||||||||| | | |||||||||| ||||| || ||||| ||||||||||||||  | ||||||||||||||  | |||||||    
T  51898673 gagaggaaatagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttt-tgtgtgggtgtcaaagggtgtattgccacctaaagatgtctat 51898771  T
Q  114 gtatcat 120  Q
    |||||||    
T  51898772 gtatcat 51898778  T

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Target: chr1; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 20 - 120
Target Start/End: Complemental strand, 43236 - 43137
Alignment:
Q  20 aaagagaaagtgtgcttgtgtgaggtccacgtgaccacgtgccatattttttgtgtgggtgtcaatagatgtattgccacctatggttgtctatgtatca 119  Q
    |||||||||||||||||||| |  ||||||||||| ||||| || | ||||||||||||||||||  ||||||||| | |||| |  |||||||||||||    
T  43236 aaagagaaagtgtgcttgtgcggagtccacgtgactacgtgtcaga-tttttgtgtgggtgtcaaaggatgtattgtctcctaagactgtctatgtatca 43138  T

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Target: chr1; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 20 - 120
Target Start/End: Original strand, 8346384 - 8346483
Alignment:
Q  20 aaagagaaagtgtgcttgtgtgaggtccacgtgaccacgtgccatattttttgtgtgggtgtcaatagatgtattgccacctatggttgtctatgtatca 119  Q
    ||||||||||||||||||||   |||||||||||| ||||| || | ||||||||||||||||||  | ||||||||||||||  | || ||||||||||    
T  8346384 aaagagaaagtgtgcttgtgcagggtccacgtgactacgtgtcaga-tttttgtgtgggtgtcaaatggtgtattgccacctaaaggtgactatgtatca 8346482  T

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Target: chr1; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 20 - 120
Target Start/End: Complemental strand, 38595258 - 38595159
Alignment:
Q  20 aaagagaaagtgtgcttgtgtgaggtccacgtgaccacgtgccatattttttgtgtgggtgtcaatagatgtattgccacctatggttgtctatgtatca 119  Q
    |||||||||||||||||||  | |||||||||||| ||||| || | ||||||||||||||||||  | ||||||||||||||  | ||| |||||||||    
T  38595258 aaagagaaagtgtgcttgtacggggtccacgtgactacgtgtcaga-tttttgtgtgggtgtcaaagggtgtattgccacctaaaggtgtttatgtatca 38595160  T

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Target: chr1; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 20 - 120
Target Start/End: Original strand, 47452316 - 47452415
Alignment:
Q  20 aaagagaaagtgtgcttgtgtgaggtccacgtgaccacgtgccatattttttgtgtgggtgtcaatagatgtattgccacctatggttgtctatgtatca 119  Q
    |||||||||||||||||||| | | |||||||||| |||||  | ||||| ||||||||||||||  | |||||| ||||||| || |||||||||||||    
T  47452316 aaagagaaagtgtgcttgtgcgggatccacgtgactacgtgttagatttt-tgtgtgggtgtcaaagggtgtattaccacctaagggtgtctatgtatca 47452414  T

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Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 19 - 121
Target Start/End: Original strand, 5958995 - 5959096
Alignment:
Q  19 gaaagagaaagtgtgcttgtgtgaggtccacgtgaccacgtgccatattttttgtgtgggtgtcaatagatgtattgccacctatggttgtctatgtatc 118  Q
    |||||||||||||| |||||| | ||||||  ||||||| || || ||||| |||||||||||||| || ||||||||||| || || ||| ||||||||    
T  5958995 gaaagagaaagtgtacttgtgcggggtccatatgaccacatgtcagatttt-tgtgtgggtgtcaagaggtgtattgccacttaagggtgtttatgtatc 5959093  T
Q  119 ata 121  Q
    |||    
T  5959094 ata 5959096  T

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Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 19 - 121
Target Start/End: Original strand, 50590995 - 50591096
Alignment:
Q  19 gaaagagaaagtgtgcttgtgtgaggtccacgtgaccacgtgccatattttttgtgtgggtgtcaatagatgtattgccacctatggttgtctatgtatc 118  Q
    |||||||||||||| |||||| | ||||||  || |||| || || ||||| ||||||||||||||  | |||||||||||||| || ||| ||||||||    
T  50590995 gaaagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttt-tgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatc 50591093  T
Q  119 ata 121  Q
    |||    
T  50591094 ata 50591096  T

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Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 20 - 120
Target Start/End: Complemental strand, 37649302 - 37649203
Alignment:
Q  20 aaagagaaagtgtgcttgtgtgaggtccacgtgaccacgtgccatattttttgtgtgggtgtcaataga-tgtattgccacctatggttgtctatgtatc 118  Q
    |||| ||||||||||||||| |   | |||||||||||||| || |||||| ||||||||||||| ||| ||||||||||||||  | ||||||||||||    
T  37649302 aaagggaaagtgtgcttgtgcggaattcacgtgaccacgtgtcagattttt-gtgtgggtgtcaa-agagtgtattgccacctaaagatgtctatgtatc 37649205  T

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Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 84
Target Start/End: Complemental strand, 13414865 - 13414802
Alignment:
Q  20 aaagagaaagtgtgcttgtgtgaggtccacgtgaccacgtgccatattttttgtgtgggtgtcaa 84  Q
    ||||||||| |||||||||||| |||||||||||| |||||  | | ||||||||||||||||||    
T  13414865 aaagagaaaatgtgcttgtgtggggtccacgtgactacgtgttaga-tttttgtgtgggtgtcaa 13414802  T

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Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 20 - 121
Target Start/End: Original strand, 37926434 - 37926534
Alignment:
Q  20 aaagagaaagtgtgcttgtgtgaggtccacgtgaccacgtgccatattttttgtgtgggtgtcaatagatgtattgccacctatggttgtctatgtatca 119  Q
    ||||||||||||| |||||  | | |||| ||| ||||||| || ||||||  ||||||||| || |||||||||||||||||  | | |||||||||||    
T  37926434 aaagagaaagtgtacttgtacgggatccatgtggccacgtgtcagattttta-tgtgggtgttaaaagatgtattgccacctaaagatatctatgtatca 37926532  T
Q  120 ta 121  Q
    ||    
T  37926533 ta 37926534  T

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Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 120
Target Start/End: Original strand, 3302521 - 3302628
Alignment:
Q  12 atgagatgaaagagaaagtgtgcttgtgtgaggtccacgtgaccacgtgccatattttttgtgtgggtgtcaatagatgtattgccacctatggttgtct 111  Q
    ||||||||||| ||||||||||||||| || ||||||  |||  ||||| || | |||||||||||||||| |   || ||||| |||||| || ||| |    
T  3302521 atgagatgaaaaagaaagtgtgcttgtatggggtccatatgattacgtgtcaga-tttttgtgtgggtgtccaggaatatattgtcacctaaggatgtat 3302619  T
Q  112 atgtatcat 120  Q
    |||||||||    
T  3302620 atgtatcat 3302628  T

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Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 120
Target Start/End: Complemental strand, 41758909 - 41758810
Alignment:
Q  20 aaagagaaagtgtgcttgtgtgaggtccacgtgaccacgtgccatattttttgtgtgggtgtcaatagatgtattgccacctatggttgtctatgtatca 119  Q
    |||||||||||||| ||||| | |||||| ||||| ||||| || | ||||||||||| ||||||  | ||||||||||  ||  | |||||||||||||    
T  41758909 aaagagaaagtgtgtttgtgcggggtccatgtgactacgtgtcaga-tttttgtgtggttgtcaaagggtgtattgccatttaatggtgtctatgtatca 41758811  T

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Target: scaffold0321 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 20 - 121
Target Start/End: Original strand, 10105 - 10205
Alignment:
Q  20 aaagagaaagtgtgcttgtgtgaggtccacgtgaccacgtgccatattttttgtgtgggtgtcaatagatgtattgccacctatggttgtctatgtatca 119  Q
    |||||||||||||||||||  | |||||||||||| ||||| || | ||||| ||||| ||||||  ||||||||||||||||  | |||||||||||||    
T  10105 aaagagaaagtgtgcttgtacgcggtccacgtgactacgtgtcaga-tttttatgtggatgtcaaaggatgtattgccacctaaaggtgtctatgtatca 10203  T
Q  120 ta 121  Q
    ||    
T  10204 ta 10205  T

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Target: scaffold1268 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold1268
Description:

Target: scaffold1268; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 14 - 120
Target Start/End: Original strand, 919 - 1024
Alignment:
Q  14 gagatgaaagagaaagtgtgcttgtgtgaggtccacgtgaccacgtgccatattttttgtgtgggtgtcaatagatgtattgccacctatggttgtctat 113  Q
    |||| ||||||||||||||||||||| | | | |||||||| ||||| ||  |||||||||||| ||| ||  | ||||||||||||||  | |||||||    
T  919 gagaggaaagagaaagtgtgcttgtgcgggattcacgtgactacgtgtca-gttttttgtgtggatgttaaagggtgtattgccacctaaagatgtctat 1017  T
Q  114 gtatcat 120  Q
    |||||||    
T  1018 gtatcat 1024  T

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Target: scaffold1267 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold1267
Description:

Target: scaffold1267; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 14 - 120
Target Start/End: Original strand, 919 - 1024
Alignment:
Q  14 gagatgaaagagaaagtgtgcttgtgtgaggtccacgtgaccacgtgccatattttttgtgtgggtgtcaatagatgtattgccacctatggttgtctat 113  Q
    |||| ||||||||||||||||||||| | | | |||||||| ||||| ||  |||||||||||| ||| ||  | ||||||||||||||  | |||||||    
T  919 gagaggaaagagaaagtgtgcttgtgcgggattcacgtgactacgtgtca-gttttttgtgtggatgttaaagggtgtattgccacctaaagatgtctat 1017  T
Q  114 gtatcat 120  Q
    |||||||    
T  1018 gtatcat 1024  T

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Target: scaffold0237 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0237
Description:

Target: scaffold0237; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 120
Target Start/End: Complemental strand, 4133 - 4034
Alignment:
Q  20 aaagagaaagtgtgcttgtgtgaggtccacgtgaccacgtgccatattttttgtgtgggtgtcaatagatgtattgccacctatggttgtctatgtatca 119  Q
    ||||||||||||||||| || | | ||||||| || ||||| || |||||| |||||||||| || || |||||||||| |||  | |||||||||||||    
T  4133 aaagagaaagtgtgcttatgcgggatccacgtaactacgtgtcagattttt-gtgtgggtgttaaaaggtgtattgccatctaaaggtgtctatgtatca 4035  T

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Target: scaffold0316 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 19 - 104
Target Start/End: Complemental strand, 17159 - 17075
Alignment:
Q  19 gaaagagaaagtgtgcttgtgtgaggtccacgtgaccacgtgccatattttttgtgtgggtgtcaatagatgtattgccacctatg 104  Q
    |||||||||| |||||||||| | |||||| |||||||| || || |||||| |||||| |||| |  |||||||||| |||||||    
T  17159 gaaagagaaaatgtgcttgtgcggggtccatgtgaccacatgtcagattttt-gtgtggatgtcgagggatgtattgcaacctatg 17075  T

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