View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3190_high_53 (Length: 250)
Name: NF3190_high_53
Description: NF3190
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3190_high_53 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 206; Significance: 1e-113; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 13 - 250
Target Start/End: Original strand, 31156278 - 31156513
Alignment:
| Q |
13 |
aatataaccgtctgaaaaatataaattgtgtgtttaaccaaagcccgtattcacagtccatttaacatgagctgaattggtgannnnnnnaaaacaaata |
112 |
Q |
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| T |
31156278 |
aatataaccgtctgaaaaatataaattgtgtgtttaaccaaagcccgtattcacagtccatttaacatgagctgaattggtgatttttttaaaacaaata |
31156377 |
T |
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| Q |
113 |
tagatcttttgacgaatatgcgaaactgtagtagctatactttgtaaatttaagaaatataatctaagaatatggaaggcatgaaaagtaattattagat |
212 |
Q |
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| T |
31156378 |
tagatcttttgacgaatatgcgaaactgtagtagctatactttgtaaatttaagaaatataatctaaga--atggaaggcatgaaaagtaattattagat |
31156475 |
T |
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| Q |
213 |
actaatatatcatcttagagtacagttgcaatccaact |
250 |
Q |
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|||||||||||||||||||||||||||||||||||||| |
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| T |
31156476 |
actaatatatcatcttagagtacagttgcaatccaact |
31156513 |
T |
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