View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3190_low_15 (Length: 496)

Name: NF3190_low_15
Description: NF3190
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3190_low_15
NF3190_low_15
[»] chr3 (25 HSPs)
chr3 (298-458)||(49644331-49644491)
chr3 (298-453)||(36177181-36177336)
chr3 (307-456)||(15877730-15877879)
chr3 (302-427)||(28939675-28939800)
chr3 (304-458)||(53464264-53464418)
chr3 (304-456)||(52313856-52314008)
chr3 (20-91)||(49644058-49644129)
chr3 (304-433)||(35424128-35424257)
chr3 (305-460)||(29096076-29096232)
chr3 (315-437)||(1995568-1995690)
chr3 (304-402)||(11467227-11467325)
chr3 (303-438)||(35496098-35496233)
chr3 (302-430)||(40793171-40793298)
chr3 (301-405)||(49786966-49787070)
chr3 (302-376)||(7352091-7352165)
chr3 (320-404)||(45266862-45266947)
chr3 (368-456)||(7352575-7352663)
chr3 (302-398)||(35846187-35846281)
chr3 (307-404)||(14898436-14898533)
chr3 (307-377)||(33103991-33104061)
chr3 (350-408)||(20809639-20809697)
chr3 (451-489)||(48157510-48157548)
chr3 (301-378)||(4489817-4489894)
chr3 (313-377)||(20207073-20207137)
chr3 (330-374)||(45240855-45240899)
[»] chr6 (10 HSPs)
chr6 (298-456)||(10682476-10682633)
chr6 (316-443)||(2844121-2844248)
chr6 (306-404)||(34427053-34427151)
chr6 (303-404)||(30349201-30349302)
chr6 (303-430)||(19763539-19763665)
chr6 (356-433)||(30775346-30775423)
chr6 (303-430)||(19789229-19789355)
chr6 (367-429)||(31602139-31602201)
chr6 (350-427)||(13685396-13685473)
chr6 (302-379)||(6313997-6314071)
[»] chr4 (23 HSPs)
chr4 (304-459)||(46381990-46382145)
chr4 (304-456)||(23559987-23560139)
chr4 (300-456)||(55875811-55875967)
chr4 (302-458)||(52326980-52327136)
chr4 (302-458)||(55875967-55876123)
chr4 (304-456)||(779867-780019)
chr4 (302-427)||(17476181-17476306)
chr4 (309-456)||(5415149-5415296)
chr4 (309-456)||(38567945-38568092)
chr4 (302-458)||(41377353-41377509)
chr4 (302-398)||(9268362-9268457)
chr4 (305-456)||(30052344-30052496)
chr4 (366-432)||(43264451-43264517)
chr4 (302-398)||(2681079-2681174)
chr4 (299-459)||(37556208-37556367)
chr4 (342-458)||(43354935-43355050)
chr4 (302-431)||(7907379-7907504)
chr4 (304-456)||(48262962-48263118)
chr4 (323-456)||(19485772-19485908)
chr4 (305-409)||(34388820-34388924)
chr4 (19-82)||(23811636-23811699)
chr4 (350-456)||(30875387-30875493)
chr4 (304-368)||(4974593-4974657)
[»] scaffold0867 (1 HSPs)
scaffold0867 (298-456)||(3485-3627)
[»] scaffold0015 (1 HSPs)
scaffold0015 (304-458)||(56561-56715)
[»] chr1 (20 HSPs)
chr1 (298-458)||(16679880-16680040)
chr1 (304-458)||(23570980-23571134)
chr1 (301-458)||(50428448-50428605)
chr1 (302-456)||(43496370-43496524)
chr1 (304-456)||(7900128-7900280)
chr1 (304-456)||(37457596-37457748)
chr1 (302-458)||(51613224-51613380)
chr1 (314-458)||(1035715-1035859)
chr1 (304-456)||(19993349-19993501)
chr1 (304-402)||(19322793-19322891)
chr1 (308-458)||(47394340-47394492)
chr1 (309-404)||(27641543-27641638)
chr1 (302-398)||(46823604-46823699)
chr1 (302-458)||(7167968-7168124)
chr1 (302-398)||(26707096-26707191)
chr1 (319-410)||(10574351-10574442)
chr1 (298-387)||(19466340-19466428)
chr1 (381-420)||(30784690-30784729)
chr1 (309-458)||(30717402-30717551)
chr1 (306-378)||(29058575-29058647)
[»] chr7 (25 HSPs)
chr7 (304-427)||(43598799-43598922)
chr7 (301-455)||(36725761-36725915)
chr7 (302-456)||(48252859-48253013)
chr7 (312-456)||(44396369-44396513)
chr7 (301-456)||(43692521-43692676)
chr7 (302-404)||(40160313-40160415)
chr7 (306-460)||(49080734-49080887)
chr7 (305-456)||(38346378-38346530)
chr7 (304-449)||(32485437-32485573)
chr7 (318-422)||(8099629-8099733)
chr7 (308-402)||(38994815-38994909)
chr7 (305-404)||(36118058-36118156)
chr7 (302-420)||(8404755-8404872)
chr7 (323-397)||(23869931-23870005)
chr7 (358-427)||(41159367-41159436)
chr7 (350-406)||(12879277-12879333)
chr7 (384-458)||(23772819-23772892)
chr7 (300-460)||(46700822-46700982)
chr7 (306-364)||(41159461-41159519)
chr7 (338-426)||(22790435-22790523)
chr7 (314-377)||(29681460-29681523)
chr7 (305-373)||(23774569-23774637)
chr7 (341-381)||(37626914-37626954)
chr7 (312-372)||(42691361-42691421)
chr7 (316-456)||(49081222-49081362)
[»] chr5 (20 HSPs)
chr5 (302-458)||(34769540-34769696)
chr5 (304-458)||(39060167-39060321)
chr5 (304-397)||(4925098-4925191)
chr5 (298-432)||(23089292-23089426)
chr5 (305-437)||(14593856-14593988)
chr5 (355-456)||(35211935-35212036)
chr5 (333-456)||(10523804-10523927)
chr5 (349-458)||(37902402-37902512)
chr5 (341-403)||(34383709-34383771)
chr5 (356-456)||(35205123-35205223)
chr5 (338-398)||(9959324-9959384)
chr5 (342-420)||(2907778-2907856)
chr5 (365-455)||(14947657-14947747)
chr5 (305-377)||(7011792-7011864)
chr5 (333-433)||(14913456-14913556)
chr5 (338-389)||(38697910-38697961)
chr5 (389-456)||(38698221-38698288)
chr5 (359-433)||(10924281-10924355)
chr5 (304-364)||(35205242-35205302)
chr5 (304-364)||(35211849-35211909)
[»] chr2 (23 HSPs)
chr2 (298-402)||(8322139-8322243)
chr2 (302-427)||(40095762-40095887)
chr2 (304-455)||(6858965-6859116)
chr2 (302-464)||(32914430-32914592)
chr2 (305-458)||(37069875-37070029)
chr2 (310-433)||(9104566-9104689)
chr2 (300-458)||(3739456-3739613)
chr2 (311-432)||(14657492-14657612)
chr2 (304-456)||(33386646-33386793)
chr2 (305-453)||(38609893-38610040)
chr2 (298-367)||(7394951-7395020)
chr2 (330-463)||(18565739-18565872)
chr2 (304-405)||(39375681-39375782)
chr2 (362-456)||(7395456-7395550)
chr2 (336-432)||(4897246-4897342)
chr2 (336-432)||(4944640-4944736)
chr2 (299-431)||(5147101-5147232)
chr2 (302-406)||(29984906-29985010)
chr2 (367-456)||(29794379-29794468)
chr2 (343-456)||(43490502-43490616)
chr2 (300-377)||(3384731-3384808)
chr2 (301-360)||(13250507-13250566)
chr2 (382-458)||(37258125-37258201)
[»] chr8 (13 HSPs)
chr8 (304-455)||(40278938-40279089)
chr8 (302-456)||(18226971-18227125)
chr8 (302-456)||(35158845-35158999)
chr8 (298-395)||(5191314-5191411)
chr8 (304-456)||(1156246-1156398)
chr8 (308-454)||(11425461-11425606)
chr8 (316-456)||(37479177-37479317)
chr8 (302-398)||(9682332-9682427)
chr8 (302-398)||(17312824-17312919)
chr8 (302-398)||(27594239-27594334)
chr8 (306-456)||(45251430-45251579)
chr8 (304-425)||(30234946-30235067)
chr8 (342-377)||(34954345-34954380)
[»] scaffold0110 (2 HSPs)
scaffold0110 (305-456)||(13773-13925)
scaffold0110 (305-456)||(21510-21662)


Alignment Details
Target: chr3 (Bit Score: 153; Significance: 7e-81; HSPs: 25)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 153; E-Value: 7e-81
Query Start/End: Original strand, 298 - 458
Target Start/End: Original strand, 49644331 - 49644491
Alignment:
Q  298 gaatttagtgggacccattttagagttttggatgagtggcatggatatttgaaaaatgtagttgagtggtttaaataattgagaagtgtgaagtaatata 397  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49644331 gaatttagtgggacccattttagagttttggatgagtggcatggatatttgaaaaatgtagttgagtggtttaaataattgagaagtgtgaagtaatata 49644430  T
Q  398 atatattaagtggggtccatttaaaccacccatatgggtggaatgaatgtggatgctctta 458  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||    
T  49644431 atatattaagtggggtccatttaaaccacccatatgggtggaataaatgtggatactctta 49644491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 298 - 453
Target Start/End: Original strand, 36177181 - 36177336
Alignment:
Q  298 gaatttagtgggacccattttagagttttggatgagtggcatggatatttgaaaaatgtagttgagtggtttaaataattgagaagtgtgaagtaatata 397  Q
    ||||||||||||| |||||||||||||||  |||||||| ||| |||||| |||||||||| ||||||||| |||||||||  |||||||||||||||||    
T  36177181 gaatttagtgggatccattttagagttttaaatgagtggtatgaatatttaaaaaatgtagatgagtggttcaaataattggaaagtgtgaagtaatata 36177280  T
Q  398 atatattaagtggggtccatttaaaccacccatatgggtggaatgaatgtggatgc 453  Q
    || ||||| |||||  ||||||| |||| |||||| ||||| ||||||||||||||    
T  36177281 atctattatgtgggacccatttataccatccatataggtggcatgaatgtggatgc 36177336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 307 - 456
Target Start/End: Complemental strand, 15877879 - 15877730
Alignment:
Q  307 gggacccattttagagttttggatgagtggcatggatatttgaaaaatgtagttgagtggtttaaataattgagaagtgtgaagtaatataatatattaa 406  Q
    ||||||||||||||||||||||| |||||| ||||||||||  ||||| ||||||||||||||||||||| || || |||||||||||||||| |||||     
T  15877879 gggacccattttagagttttggaggagtggtatggatatttagaaaatatagttgagtggtttaaataatggaaaaatgtgaagtaatataatgtattat 15877780  T
Q  407 gtggggtccatttaaaccacccatatgggtggaatgaatgtggatgctct 456  Q
    |||||  ||||||| ||||||||||||||||| ||| ||| || ||||||    
T  15877779 gtgggacccatttataccacccatatgggtggtatggatgggggtgctct 15877730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 302 - 427
Target Start/End: Complemental strand, 28939800 - 28939675
Alignment:
Q  302 ttagtgggacccattttagagttttggatgagtggcatggatatttgaaaaatgtagttgagtggtttaaataattgagaagtgtgaagtaatataatat 401  Q
    ||||||||||| ||| ||||||||||||||||||  ||| ||||||  ||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  28939800 ttagtgggaccaattgtagagttttggatgagtgatatgaatatttagaaaatgtagttgagtagtttaaataattgagaagtgtgaagtaatataatat 28939701  T
Q  402 attaagtggggtccatttaaaccacc 427  Q
    |||| |||||||| ||||| ||||||    
T  28939700 attaggtggggtctatttataccacc 28939675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 304 - 458
Target Start/End: Complemental strand, 53464418 - 53464264
Alignment:
Q  304 agtgggacccattttagagttttggatgagtggcatggatatttgaaaaatgtagttgagtggtttaaataattgagaagtgtgaagtaatataatatat 403  Q
    ||||||||||||||||||||||| |  |||||| ||||||||||  |||||||||||||||||||||||||| |   |||||| |||||||||||| ||     
T  53464418 agtgggacccattttagagttttaggggagtggtatggatatttagaaaatgtagttgagtggtttaaataactagaaagtgtaaagtaatataatgtaa 53464319  T
Q  404 taagtggggtccatttaaaccacccatatgggtggaatgaatgtggatgctctta 458  Q
    || |||||  ||||||| ||||||||| ||||||| ||| |||||| ||||||||    
T  53464318 tatgtgggtcccatttataccacccatttgggtggcatggatgtgggtgctctta 53464264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 304 - 456
Target Start/End: Complemental strand, 52314008 - 52313856
Alignment:
Q  304 agtgggacccattttagagttttggatgagtggcatggatatttgaaaaatgtagttgagtggtttaaataattgagaagtgtgaagtaatataatatat 403  Q
    ||||||||||||||||||||||| |  |||||| ||||||||||  |||||||||||||||||||||||||| |   |||||| |||||||||||| ||     
T  52314008 agtgggacccattttagagttttaggggagtggtatggatatttagaaaatgtagttgagtggtttaaataactagaaagtgtaaagtaatataatgtaa 52313909  T
Q  404 taagtggggtccatttaaaccacccatatgggtggaatgaatgtggatgctct 456  Q
    || |||||  ||||||| ||||||||| ||||||| ||| |||||| ||||||    
T  52313908 tatgtgggtcccatttataccacccatttgggtggcatggatgtgggtgctct 52313856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 20 - 91
Target Start/End: Original strand, 49644058 - 49644129
Alignment:
Q  20 ttttttattgcttcaccaacactttttcaaacaaaatatcatttgccttctcaatttattaccaactgcact 91  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49644058 ttttttattgtttcaccaacactttttcaaacaaaatatcatttgccttctcaatttattaccaactgcact 49644129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 304 - 433
Target Start/End: Complemental strand, 35424257 - 35424128
Alignment:
Q  304 agtgggacccattttagagttttggatgagtggcatggatatttgaaaaatgtagttgagtggtttaaataattgagaagtgtgaagtaatataatatat 403  Q
    |||| |||||||||||||||||| || | |||| ||||||||||  |||||||||||||||||||||||||||||| || |||||||||||||||| |||    
T  35424257 agtgagacccattttagagttttagaagggtggtatggatatttagaaaatgtagttgagtggtttaaataattgaaaaatgtgaagtaatataatgtat 35424158  T
Q  404 taagtggggtccatttaaaccacccatatg 433  Q
    || ||| |  ||||||| ||||| ||||||    
T  35424157 tatgtgagacccatttataccactcatatg 35424128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 305 - 460
Target Start/End: Complemental strand, 29096232 - 29096076
Alignment:
Q  305 gtgggacccattttagagttttggatgagtggcatggatatttgaaaaatgtagttgagtggtttaaataattgagaagtgtgaagtaata-taatatat 403  Q
    |||||||| | |||||||||||  |||||||| ||| |||||| || |||||||||||||||||||||||||||| || |||||||||||| | ||||||    
T  29096232 gtgggacctaatttagagttttaaatgagtggtatgaatatttaaataatgtagttgagtggtttaaataattgaaaaatgtgaagtaatagttatatat 29096133  T
Q  404 taagtggggtccatttaaaccacccatatgggtggaatgaatgtggatgctcttact 460  Q
    |  |||||||||||||| |||| | || ||||||   || |||||||||||||||||    
T  29096132 tgtgtggggtccatttataccatcaatgtgggtgatgtggatgtggatgctcttact 29096076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 315 - 437
Target Start/End: Complemental strand, 1995690 - 1995568
Alignment:
Q  315 ttttagagttttggatgagtggcatggatatttgaaaaatgtagttgagtggtttaaataattgagaagtgtgaagtaatataatatattaagtggggtc 414  Q
    ||||||||||||  | |||||| ||||||||||  ||||||||||| ||||||||||||||||| |||||||||||||||||||| ||||| |||||  |    
T  1995690 ttttagagttttaaaggagtggtatggatatttagaaaatgtagttaagtggtttaaataattgggaagtgtgaagtaatataatgtattatgtgggacc 1995591  T
Q  415 catttaaaccacccatatgggtg 437  Q
    |||||| |||| || ||||||||    
T  1995590 catttataccatccgtatgggtg 1995568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 304 - 402
Target Start/End: Complemental strand, 11467325 - 11467227
Alignment:
Q  304 agtgggacccattttagagttttggatgagtggcatggatatttgaaaaatgtagttgagtggtttaaataattgagaagtgtgaagtaatataatata 402  Q
    |||| ||||||||||||| |||| || |||||  ||||||||||  ||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  11467325 agtgagacccattttagaattttagaggagtgatatggatatttagaaaatgtagttgattggtttaaataattgagaagtgtgaagtaatataatata 11467227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 303 - 438
Target Start/End: Complemental strand, 35496233 - 35496098
Alignment:
Q  303 tagtgggacccattttagagttttggatgagtggcatggatatttgaaaaatgtagttgagtggtttaaataattgagaagtgtgaagtaatataatata 402  Q
    |||||||||  |||||||||| || || |||| | ||||| |||  |||||||||||||| || ||||||||||||||||||||||||||||||||||||    
T  35496233 tagtgggacttattttagagtattagaagagtagtatggaaattaaaaaaatgtagttgaatgatttaaataattgagaagtgtgaagtaatataatata 35496134  T
Q  403 ttaagtggggtccatttaaaccacccatatgggtgg 438  Q
    ||| || ||  ||||||| ||||| ||||| |||||    
T  35496133 ttatgtaggacccatttataccactcatataggtgg 35496098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 302 - 430
Target Start/End: Complemental strand, 40793298 - 40793171
Alignment:
Q  302 ttagtgggacccattttagagttttggatgagtggcatggatatttgaaaaatgtagttgagtggtttaaataattgagaagtgtgaagtaatataatat 401  Q
    ||||||||| ||||| || ||||||| | |||||  ||| ||||||  |||||||||||||||||||||||||||||| ||||| ||||||||||||  |    
T  40793298 ttagtgggatccattgta-agttttgtaagagtgatatgaatatttataaaatgtagttgagtggtttaaataattgaaaagtgagaagtaatataaagt 40793200  T
Q  402 attaagtggggtccatttaaaccacccat 430  Q
    |||| ||||  |||||||| |||||||||    
T  40793199 attacgtggaatccatttataccacccat 40793171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 301 - 405
Target Start/End: Complemental strand, 49787070 - 49786966
Alignment:
Q  301 tttagtgggacccattttagagttttggatgagtggcatggatatttgaaaaatgtagttgagtggtttaaataattgagaagtgtgaagtaatataata 400  Q
    |||| ||| |||||||||| |||||| ||||||||| ||| ||||||  ||||| |||||||||||||||||||||||||| ||  ||| ||||||||||    
T  49787070 tttaatggaacccattttaaagttttagatgagtggtatgaatatttataaaatatagttgagtggtttaaataattgagatgtaagaaataatataata 49786971  T
Q  401 tatta 405  Q
    |||||    
T  49786970 tatta 49786966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 302 - 376
Target Start/End: Original strand, 7352091 - 7352165
Alignment:
Q  302 ttagtgggacccattttagagttttggatgagtggcatggatatttgaaaaatgtagttgagtggtttaaataat 376  Q
    ||||||||||||||||||||||||   ||| |||| ||| |||||| |||||||||||||| |||||||||||||    
T  7352091 ttagtgggacccattttagagtttataatgggtggtatgaatatttaaaaaatgtagttgaatggtttaaataat 7352165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 320 - 404
Target Start/End: Original strand, 45266862 - 45266947
Alignment:
Q  320 gagttttggatgagtggcatggatatttgaaaaatg-tagttgagtggtttaaataattgagaagtgtgaagtaatataatatatt 404  Q
    |||||||||||| |||| ||| ||||||  |||||| ||||| |||||||||||| ||||||||||||||| ||||||||| ||||    
T  45266862 gagttttggatgggtggtatgaatatttagaaaatgctagtttagtggtttaaatgattgagaagtgtgaaataatataatgtatt 45266947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 368 - 456
Target Start/End: Original strand, 7352575 - 7352663
Alignment:
Q  368 ttaaataattgagaagtgtgaagtaatataatatattaagtggggtccatttaaaccacccatatgggtggaatgaatgtggatgctct 456  Q
    ||||||||||| ||||||||| |||||||||| ||||| |||||  || |||| |||||||| |||||||  ||| |||||||||||||    
T  7352575 ttaaataattgggaagtgtgaggtaatataatgtattatgtgggacccgtttataccacccaaatgggtgacatggatgtggatgctct 7352663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 302 - 398
Target Start/End: Complemental strand, 35846281 - 35846187
Alignment:
Q  302 ttagtgggacccattttagagttttggatgagtggcatggatatttgaaaaatgtagttgagtggtttaaataattgagaagtgtgaagtaatataa 398  Q
    ||||||||||||||| || ||||||| | |||||| | ||||||||  ||||||||||||| |||||||||||||||| |||||| || ||||||||    
T  35846281 ttagtgggacccattgta-agttttgtaagagtggta-ggatatttagaaaatgtagttgaatggtttaaataattgaaaagtgtaaaataatataa 35846187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 307 - 404
Target Start/End: Original strand, 14898436 - 14898533
Alignment:
Q  307 gggacccattttagagttttggatgagtggcatggatatttgaaaaatgtagttgagtggtttaaataattgagaagtgtgaagtaatataatatatt 404  Q
    ||||| || |||||||||||| || ||||| ||| ||||||  ||||||||||| ||||||||||| |||||| || ||| || ||||||||| ||||    
T  14898436 gggactcaatttagagttttgaataagtggtatgaatatttagaaaatgtagtttagtggtttaaacaattgaaaaatgtaaaataatataatgtatt 14898533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 307 - 377
Target Start/End: Original strand, 33103991 - 33104061
Alignment:
Q  307 gggacccattttagagttttggatgagtggcatggatatttgaaaaatgtagttgagtggtttaaataatt 377  Q
    ||||||||||| |   |||| ||| ||||| |||||||||| |||||||||||||||| ||||||||||||    
T  33103991 gggacccatttaatttttttagataagtggtatggatattttaaaaatgtagttgagttgtttaaataatt 33104061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 350 - 408
Target Start/End: Complemental strand, 20809697 - 20809639
Alignment:
Q  350 aaaatgtagttgagtggtttaaataattgagaagtgtgaagtaatataatatattaagt 408  Q
    ||||| ||||| ||| |||||||||||| | |||| ||||||||||||| |||||||||    
T  20809697 aaaatatagttaagttgtttaaataattaaaaagtatgaagtaatataaaatattaagt 20809639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 451 - 489
Target Start/End: Original strand, 48157510 - 48157548
Alignment:
Q  451 tgctcttactgtctgggtgctctactgctgtctgtgctg 489  Q
    |||| |||||||||||||||||||||| |||||||||||    
T  48157510 tgctgttactgtctgggtgctctactgttgtctgtgctg 48157548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 301 - 378
Target Start/End: Original strand, 4489817 - 4489894
Alignment:
Q  301 tttagtgggacccattttagagttttggatgagtggcatggatatttgaaaaatgtagttgagtggtttaaataattg 378  Q
    |||| ||| |||||||||||||||||  |||||||| ||  ||||||  ||||| || ||||||||| ||||||||||    
T  4489817 tttaatggaacccattttagagttttaaatgagtggtataaatatttataaaatataattgagtggtataaataattg 4489894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 313 - 377
Target Start/End: Complemental strand, 20207137 - 20207073
Alignment:
Q  313 cattttagagttttggatgagtggcatggatatttgaaaaatgtagttgagtggtttaaataatt 377  Q
    ||||||||||||||| ||||||   ||| ||||||  ||||||| ||||||| ||||||||||||    
T  20207137 cattttagagttttgaatgagttttatgaatatttagaaaatgtggttgagttgtttaaataatt 20207073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 330 - 374
Target Start/End: Original strand, 45240855 - 45240899
Alignment:
Q  330 tgagtggcatggatatttgaaaaatgtagttgagtggtttaaata 374  Q
    ||||||| || |||||||||||||| ||||| |||||||||||||    
T  45240855 tgagtggtatagatatttgaaaaatatagttaagtggtttaaata 45240899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 139; Significance: 2e-72; HSPs: 10)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 298 - 456
Target Start/End: Original strand, 10682476 - 10682633
Alignment:
Q  298 gaatttagtgggacccattttagagttttggatgagtggcatggatatttgaaaaatgtagttgagtggtttaaataattgagaagtgtgaagtaatata 397  Q
    |||||||||||||||||||||||||||||  ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10682476 gaatttagtgggacccattttagagttttt-atgagtgacatggatatttgaaaaatgtagttgagtggtttaaataattgagaagtgtgaagtaatata 10682574  T
Q  398 atatattaagtggggtccatttaaaccacccatatgggtggaatgaatgtggatgctct 456  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  10682575 atatattaagtggggtccatttaaaccatccatatgggtggaatgaatgtggatgctct 10682633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 316 - 443
Target Start/End: Original strand, 2844121 - 2844248
Alignment:
Q  316 tttagagttttggatgagtggcatggatatttgaaaaatgtagttgagtggtttaaataattgagaagtgtgaagtaatataatatattaagtggggtcc 415  Q
    ||||||||||| ||||||| | ||| |||||| |||||||||||||||||||||||||||||| |||||||||||||||||||| ||||| |||     |    
T  2844121 tttagagttttagatgagtagtatgaatatttaaaaaatgtagttgagtggtttaaataattgggaagtgtgaagtaatataatgtattatgtgaaactc 2844220  T
Q  416 atttaaaccacccatatgggtggaatga 443  Q
    ||||| ||||||||||| ||||| ||||    
T  2844221 atttataccacccatatcggtggcatga 2844248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 306 - 404
Target Start/End: Original strand, 34427053 - 34427151
Alignment:
Q  306 tgggacccattttagagttttggatgagtggcatggatatttgaaaaatgtagttgagtggtttaaataattgagaagtgtgaagtaatataatatatt 404  Q
    |||||||||||||| | |||||||| ||||||||| |||||| ||||| |||||||||| |||||||||||| |||||||| |||||| ||||||||||    
T  34427053 tgggacccattttaaaattttggattagtggcatgcatatttaaaaaaagtagttgagtagtttaaataattaagaagtgttaagtaacataatatatt 34427151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 303 - 404
Target Start/End: Complemental strand, 30349302 - 30349201
Alignment:
Q  303 tagtgggacccattttagagttttggatgagtggcatggatatttgaaaaatgtagttgagtggtttaaataattgagaagtgtgaagtaatataatata 402  Q
    |||||||||||||| | ||||||||||||||||| | || ||||| |||| | || |||| | ||||||||| ||||||||| |||||||||||||||||    
T  30349302 tagtgggacccattgtggagttttggatgagtggaacgggtatttcaaaattataattgaattgtttaaatatttgagaagtatgaagtaatataatata 30349203  T
Q  403 tt 404  Q
    ||    
T  30349202 tt 30349201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 303 - 430
Target Start/End: Complemental strand, 19763665 - 19763539
Alignment:
Q  303 tagtgggacccattttagagttttggatgagtggcatggatatttgaaaaatgtagttgagtggtttaaataattgagaagtgtgaagtaatataatata 402  Q
    |||||| ||||||| || ||||||| | |||||| ||| ||||||  |||||||| || |||||||||||||||||  |||||||||||||||||| |||    
T  19763665 tagtggaacccattgta-agttttgtaagagtggtatgaatatttagaaaatgtaattaagtggtttaaataattggaaagtgtgaagtaatataaaata 19763567  T
Q  403 ttaagtggggtccatttaaaccacccat 430  Q
    ||| |||||  ||| ||| |||||||||    
T  19763566 ttacgtgggacccagttataccacccat 19763539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 356 - 433
Target Start/End: Complemental strand, 30775423 - 30775346
Alignment:
Q  356 tagttgagtggtttaaataattgagaagtgtgaagtaatataatatattaagtggggtccatttaaaccacccatatg 433  Q
    |||||||||||||||||||||||| ||||||||||||||||||| ||||| || ||  ||||||| |||||| |||||    
T  30775423 tagttgagtggtttaaataattgaaaagtgtgaagtaatataatgtattatgtaggacccatttataccacctatatg 30775346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 303 - 430
Target Start/End: Complemental strand, 19789355 - 19789229
Alignment:
Q  303 tagtgggacccattttagagttttggatgagtggcatggatatttgaaaaatgtagttgagtggtttaaataattgagaagtgtgaagtaatataatata 402  Q
    |||||||||||||| || ||||||| | |||||  ||| ||||||  |||||||| || |||| ||||||||||||| |||||||  ||||||||| |||    
T  19789355 tagtgggacccattgta-agttttgtaagagtgatatgaatatttagaaaatgtaattaagtgatttaaataattgaaaagtgtggcgtaatataaaata 19789257  T
Q  403 ttaagtggggtccatttaaaccacccat 430  Q
    ||| |||||  ||| ||| |||||||||    
T  19789256 ttacgtgggacccagttataccacccat 19789229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 367 - 429
Target Start/End: Complemental strand, 31602201 - 31602139
Alignment:
Q  367 tttaaataattgagaagtgtgaagtaatataatatattaagtggggtccatttaaaccaccca 429  Q
    ||||||||||||||||||||||| |||||||| ||||| | || |||| ||||| ||||||||    
T  31602201 tttaaataattgagaagtgtgaattaatataaaatattgaatgaggtctatttataccaccca 31602139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 350 - 427
Target Start/End: Complemental strand, 13685473 - 13685396
Alignment:
Q  350 aaaatgtagttgagtggtttaaataattgagaagtgtgaagtaatataatatattaagtggggtccatttaaaccacc 427  Q
    ||||| |||||||||| ||||||||||||| |||| | || ||||||||| ||||| |||||  ||||||| ||||||    
T  13685473 aaaatatagttgagtgttttaaataattgaaaagtataaaataatataatgtattatgtgggacccatttataccacc 13685396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 302 - 379
Target Start/End: Complemental strand, 6314071 - 6313997
Alignment:
Q  302 ttagtgggacccattttagagttttggatgagtggcatggatatttgaaaaatgtagttgagtggtttaaataattga 379  Q
    |||||| ||| ||||||||||||||| | |||||  ||| |||||| ||||||||||||||   ||||||||||||||    
T  6314071 ttagtgagactcattttagagttttgaaagagtgctatgaatatttaaaaaatgtagttga---gtttaaataattga 6313997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 96; Significance: 7e-47; HSPs: 23)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 304 - 459
Target Start/End: Original strand, 46381990 - 46382145
Alignment:
Q  304 agtgggacccattttagagttttggatgagtggcatggatatttgaaaaatgtagttgagtggtttaaataattgagaagtgtgaagtaatataatatat 403  Q
    |||||||||||||||| |||||| ||| ||||| ||| ||||||||||||| |||| ||||||||||||||||||||||||||||| |||||||||||||    
T  46381990 agtgggacccattttaaagttttagataagtggtatgaatatttgaaaaatatagtggagtggtttaaataattgagaagtgtgaactaatataatatat 46382089  T
Q  404 taagtggggtccatttaaaccacccatatgggtggaatgaatgtggatgctcttac 459  Q
    ||||| ||||||||||| |||||| |  ||||||| ||| ||||||||||||||||    
T  46382090 taagtagggtccatttataccaccaaattgggtggcatggatgtggatgctcttac 46382145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 304 - 456
Target Start/End: Complemental strand, 23560139 - 23559987
Alignment:
Q  304 agtgggacccattttagagttttggatgagtggcatggatatttgaaaaatgtagttgagtggtttaaataattgagaagtgtgaagtaatataatatat 403  Q
    ||||||||||||||||||||||| || |||||||||||||||||  |||||||||||||||||||||||||||||  |||||| ||||||| ||||||||    
T  23560139 agtgggacccattttagagttttagaggagtggcatggatatttagaaaatgtagttgagtggtttaaataattggaaagtgtaaagtaatgtaatatat 23560040  T
Q  404 taagtggggtccatttaaaccacccatatgggtggaatgaatgtggatgctct 456  Q
    || |||||  ||||||| ||||||||| ||||||| ||| |||||| ||||||    
T  23560039 tatgtgggtcccatttataccacccatttgggtggcatggatgtgggtgctct 23559987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 300 - 456
Target Start/End: Original strand, 55875811 - 55875967
Alignment:
Q  300 atttagtgggacccattttagagttttggatgagtggcatggatatttgaaaaatgtagttgagtggtttaaataattgagaagtgtgaagtaatataat 399  Q
    ||||||||||||||||||||||||||| ||||||||| ||| |||||| ||||||||||||||||||||||| |||||||||  ||||||||||||||||    
T  55875811 atttagtgggacccattttagagttttagatgagtggtatgaatatttaaaaaatgtagttgagtggtttaagtaattgagagatgtgaagtaatataat 55875910  T
Q  400 atattaagtggggtccatttaaaccacccatatgggtggaatgaatgtggatgctct 456  Q
     ||||| |||||  ||||||| || || || |||||||| ||| |||||||||||||    
T  55875911 ttattatgtgggacccatttatactacacacatgggtggtatggatgtggatgctct 55875967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 302 - 458
Target Start/End: Original strand, 52326980 - 52327136
Alignment:
Q  302 ttagtgggacccattttagagttttggatgagtggcatggatattt-gaaaaatgtagttgagtggtttaaataattgagaagtgtgaagtaatataata 400  Q
    ||||||||||| |||||||||||||||| |||||| |||||||||| |||||||||||||||||| ||||||||||||| |||||||||||||||||| |    
T  52326980 ttagtgggacctattttagagttttgga-gagtggtatggatatttagaaaaatgtagttgagtgatttaaataattgaaaagtgtgaagtaatataaaa 52327078  T
Q  401 tattaagtggggtccatttaaaccacccatatgggtggaatgaatgtggatgctctta 458  Q
    ||||| |||||  ||||||| || || ||||||||||| ||| |||||| ||||||||    
T  52327079 tattatgtgggacccatttatactactcatatgggtggcatggatgtggctgctctta 52327136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 302 - 458
Target Start/End: Complemental strand, 55876123 - 55875967
Alignment:
Q  302 ttagtgggacccattttagagttttggatgagtggcatggatatttgaaaaatgtagttgagtggtttaaataattgagaagtgtgaagtaatataatat 401  Q
    ||||||||||| ||| ||||||||||| |||| || ||||||||||  ||| ||||||||| | ||||||||||||||||||||||||||||||||||||    
T  55876123 ttagtgggaccaattgtagagttttgggtgaggggtatggatatttagaaagtgtagttgaatagtttaaataattgagaagtgtgaagtaatataatat 55876024  T
Q  402 attaagtggggtccatttaaaccacccatatgggtggaatgaatgtggatgctctta 458  Q
    ||||||| ||||||||||| |||||| | || ||| | ||| |||||||||||||||    
T  55876023 attaagtagggtccatttataccaccaaaataggtagtatggatgtggatgctctta 55875967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 304 - 456
Target Start/End: Complemental strand, 780019 - 779867
Alignment:
Q  304 agtgggacccattttagagttttggatgagtggcatggatatttgaaaaatgtagttgagtggtttaaataattgagaagtgtgaagtaatataatatat 403  Q
    |||||||||||||||||| ||||||| |||||| ||||||||||  ||||| ||||||||||||||||||||| || || |||||||||||||||| |||    
T  780019 agtgggacccattttagaattttggaggagtggtatggatatttagaaaatatagttgagtggtttaaataatggaaaaatgtgaagtaatataatgtat 779920  T
Q  404 taagtggggtccatttaaaccacccatatgggtggaatgaatgtggatgctct 456  Q
    || ||| |  ||||||| ||||||||||||||||| ||| |||||| ||||||    
T  779919 tatgtgagacccatttataccacccatatgggtggtatggatgtgggtgctct 779867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 302 - 427
Target Start/End: Original strand, 17476181 - 17476306
Alignment:
Q  302 ttagtgggacccattttagagttttggatgagtggcatggatatttgaaaaatgtagttgagtggtttaaataattgagaagtgtgaagtaatataatat 401  Q
    ||||||||| |||||||| | |||||||||||||| ||||||||||  ||||||||||||||| || ||||||||||  || ||||||| ||||||||||    
T  17476181 ttagtgggatccattttaaaattttggatgagtggtatggatatttagaaaatgtagttgagttgtctaaataattggaaaatgtgaagaaatataatat 17476280  T
Q  402 attaagtggggtccatttaaaccacc 427  Q
    || |||||||||||||||| ||||||    
T  17476281 atcaagtggggtccatttataccacc 17476306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 309 - 456
Target Start/End: Complemental strand, 5415296 - 5415149
Alignment:
Q  309 gacccattttagagttttggatgagtggcatggatatttgaaaaatgtagttgagtggtttaaataattgagaagtgtgaagtaatataatatattaagt 408  Q
    |||||||||||||||||| || |||||| ||| ||||||  ||||||||||||||||  ||||||||||| ||||||| |||||||||||||||||| ||    
T  5415296 gacccattttagagttttagaggagtggtatgaatatttagaaaatgtagttgagtgagttaaataattgggaagtgtaaagtaatataatatattatgt 5415197  T
Q  409 ggggtccatttaaaccacccatatgggtggaatgaatgtggatgctct 456  Q
    ||   ||||||| |||| |||| ||||||| ||| |||||| ||||||    
T  5415196 ggatcccatttataccatccatttgggtggcatggatgtggttgctct 5415149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 309 - 456
Target Start/End: Original strand, 38567945 - 38568092
Alignment:
Q  309 gacccattttagagttttggatgagtggcatggatatttgaaaaatgtagttgagtggtttaaataattgagaagtgtgaagtaatataatatattaagt 408  Q
    ||||||||||| |||||| ||  ||||| ||| |||||| ||||||||||||||||||||||||||||||| ||||  |||||||||||||||||| |||    
T  38567945 gacccattttaaagttttagaatagtggtatgaatatttaaaaaatgtagttgagtggtttaaataattgaaaagtaagaagtaatataatatattgagt 38568044  T
Q  409 ggggtccatttaaaccacccatatgggtggaatgaatgtggatgctct 456  Q
    | |||||||| | |||||| || |  |||| ||| |||||||||||||    
T  38568045 gaggtccattcataccaccaatgtaagtggcatggatgtggatgctct 38568092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 302 - 458
Target Start/End: Original strand, 41377353 - 41377509
Alignment:
Q  302 ttagtgggacccattttagagttttggatgagtggcatggatatttgaaaaatgtagttgagtggtttaaataattgagaagtgtgaagtaatataatat 401  Q
    |||||||||||||||| ||||||||  | |||| | ||| |||||| |||||||||||||||| ||| |||||||||||||||| |||||||||||||||    
T  41377353 ttagtgggacccatttaagagttttaaaagagtagtatgaatatttaaaaaatgtagttgagtagttaaaataattgagaagtgggaagtaatataatat 41377452  T
Q  402 attaagtggggtccatttaaaccacccatatgggtggaatgaatgtggatgctctta 458  Q
    |||| ||  |  ||||||| || | |||||| ||||  ||| | |||||||||||||    
T  41377453 attatgtaagacccatttatactatccatataggtgacatggaagtggatgctctta 41377509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 302 - 398
Target Start/End: Complemental strand, 9268457 - 9268362
Alignment:
Q  302 ttagtgggacccattttagagttttggatgagtggcatggatatttgaaaaatgtagttgagtggtttaaataattgagaagtgtgaagtaatataa 398  Q
    ||||||||||||||| || ||||||| | || ||| |||||| |||  |||||||||||||||||||||||||||||| ||||||||||||||||||    
T  9268457 ttagtgggacccattata-agttttgtaagaatggtatggatgtttagaaaatgtagttgagtggtttaaataattgaaaagtgtgaagtaatataa 9268362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 305 - 456
Target Start/End: Original strand, 30052344 - 30052496
Alignment:
Q  305 gtgggacccattttagagttttggatgagtggcatggatatttgaaaaatgtagttgagtggtttaaataattgagaagtgtgaagtaata-taatatat 403  Q
    ||||||| || ||||||||||| ||||||| | |||||||||| |||||||||||||| |||||||||||||| | || | |||||||||| | | ||||    
T  30052344 gtgggactcaatttagagttttagatgagtagtatggatatttaaaaaatgtagttgattggtttaaataattaaaaaatatgaagtaatatttaaatat 30052443  T
Q  404 taagtggggtccatttaaaccacccatatgggtggaatgaatgtggatgctct 456  Q
    |  |||||||| ||||| || | | || ||||||| ||| |||||||||||||    
T  30052444 tgtgtggggtctatttatactatcaatgtgggtggtatggatgtggatgctct 30052496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 366 - 432
Target Start/End: Complemental strand, 43264517 - 43264451
Alignment:
Q  366 gtttaaataattgagaagtgtgaagtaatataatatattaagtggggtccatttaaaccacccatat 432  Q
    |||||||||||||||||||||||||||||||||||||||| ||| |||||||||| ||||| |||||    
T  43264517 gtttaaataattgagaagtgtgaagtaatataatatattaggtgaggtccatttataccactcatat 43264451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 302 - 398
Target Start/End: Original strand, 2681079 - 2681174
Alignment:
Q  302 ttagtgggacccattttagagttttggatgagtggcatggatatttgaaaaatgtagttgagtggtttaaataattgagaagtgtgaagtaatataa 398  Q
    ||||||||||||||| || ||||||| | || ||| |||||| |||  || ||||||||||||||||||||||||||| ||||||||||||||||||    
T  2681079 ttagtgggacccattata-agttttgtaagaatggtatggatgtttagaagatgtagttgagtggtttaaataattgaaaagtgtgaagtaatataa 2681174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 299 - 459
Target Start/End: Complemental strand, 37556367 - 37556208
Alignment:
Q  299 aatttagtgggacccattttagagttttggatgagtggcatggatatttgaaaaatgtagttgagtggtttaaataattgagaagtgtgaagtaatataa 398  Q
    |||||||||| ||| ||| |||| | || ||||||| | |||||||||| |||||| ||||||||| ||||||||||||||||| |||| | || |||||    
T  37556367 aatttagtggaacctattgtaga-tattagatgagtagtatggatattttaaaaatatagttgagtagtttaaataattgagaaatgtgtaatattataa 37556269  T
Q  399 tatattaagtggggtccatttaaaccacccatatgggtggaatgaatgtggatgctcttac 459  Q
     | |||||  |||||| ||||| ||||| |||||  |||| ||| |||||| |||||||||    
T  37556268 aaaattaaacggggtctatttataccactcatataagtggtatggatgtgggtgctcttac 37556208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 342 - 458
Target Start/End: Complemental strand, 43355050 - 43354935
Alignment:
Q  342 atatttgaaaaatgtagttgagtggtttaaataattgagaagtgtgaagtaatataatatattaagtggggtccatttaaaccacccatatgggtggaat 441  Q
    |||||| ||||||||| ||||||||||||||||||||| | |||| ||||||||||||||||| ||||| ||| ||||| |||| | |||||  ||  ||    
T  43355050 atatttaaaaaatgtaattgagtggtttaaataattga-aggtgtaaagtaatataatatattgagtggagtctatttataccatcaatatgaatgtcat 43354952  T
Q  442 gaatgtggatgctctta 458  Q
    | |||||||||||||||    
T  43354951 ggatgtggatgctctta 43354935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 302 - 431
Target Start/End: Original strand, 7907379 - 7907504
Alignment:
Q  302 ttagtgggacccattttagagttttggatgagtggcatggatatttgaaaaatgtagttgagtggtttaaataattgagaagtgtgaagtaatataatat 401  Q
    |||||| || |||||||| ||||||||| |||||  ||||||||||  |||||||||||||||||||||||||||||  ||||||||||   |||||  |    
T  7907379 ttagtgagatccatttta-agttttggaagagtgatatggatatttagaaaatgtagttgagtggtttaaataattggaaagtgtgaag---tataaagt 7907474  T
Q  402 attaagtggggtccatttaaaccacccata 431  Q
    |||| |||||  ||||||| ||||||||||    
T  7907475 attatgtgggacccatttataccacccata 7907504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 304 - 456
Target Start/End: Complemental strand, 48263118 - 48262962
Alignment:
Q  304 agtgggacccattttagagttttggatgagtggcatggatatttgaaaaatgtagtt-gagtggtttaaataattgagaagtgtgaagtaa---tataat 399  Q
    |||| |||||||||||||||||| || |||||| ||| ||||||  |||||||||||  | || ||||||||||||| |||||| ||||||   ||||||    
T  48263118 agtgagacccattttagagttttagaggagtggtatgaatatttagaaaatgtagttaaaatgatttaaataattgaaaagtgtaaagtaatagtataat 48263019  T
Q  400 atattaagtggggtccatttaaaccacccatatgggtggaatgaatgtggatgctct 456  Q
    |||||| ||| |   |||||| |||| |||| ||||||| ||| |||||||||||||    
T  48263018 atattatgtgagtctcatttataccatccatttgggtggcatggatgtggatgctct 48262962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 323 - 456
Target Start/End: Original strand, 19485772 - 19485908
Alignment:
Q  323 ttttggatgagtggcatggatatttgaaaaatgtagttgagtggtttaaataattgagaagtgtgaagtaatataatatatta---agtggggtccattt 419  Q
    |||| ||||||||| | | ||||||  ||||||||  ||| |||||||||||||| | |||||| || ||||||||| |||||   ||||| ||||||||    
T  19485772 ttttagatgagtggtacgaatatttagaaaatgtaagtgaatggtttaaataattaaaaagtgtaaaataatataatgtattaagtagtggagtccattt 19485871  T
Q  420 aaaccacccatatgggtggaatgaatgtggatgctct 456  Q
    | ||||||||||||| ||  ||| |||||| ||||||    
T  19485872 ataccacccatatggatgacatggatgtgggtgctct 19485908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 305 - 409
Target Start/End: Complemental strand, 34388924 - 34388820
Alignment:
Q  305 gtgggacccattttagagttttggatgagtggcatggatatttgaaaaatgtagttgagtggtttaaataattgagaagtgtgaagtaatataatatatt 404  Q
    |||||| ||| |||||| ||| |||||||||  ||| ||||||  ||||||| ||| |||||||||||||||||| || ||| || ||||||||| ||||    
T  34388924 gtgggatccaatttagaatttgggatgagtgatatgaatatttagaaaatgtggtttagtggtttaaataattgaaaaatgtaaaataatataatgtatt 34388825  T
Q  405 aagtg 409  Q
     ||||    
T  34388824 cagtg 34388820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 82
Target Start/End: Complemental strand, 23811699 - 23811636
Alignment:
Q  19 attttttattgcttcaccaacactttttcaaacaaaatatcatttgccttctcaatttattacc 82  Q
    ||||||||||| ||||| |||||||||| ||||||||| ||| || |||| |||| ||||||||    
T  23811699 attttttattgtttcacaaacactttttgaaacaaaatgtcaattaccttttcaaattattacc 23811636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 350 - 456
Target Start/End: Original strand, 30875387 - 30875493
Alignment:
Q  350 aaaatgtagttgagtggtttaaataattgagaagtgtgaagtaatataatatattaagtggggtccatttaaaccacccatatgggtggaatgaatgtgg 449  Q
    ||||| ||||| |||| |||||||||||| ||||| | || ||||||||| |||| ||||||   |||||| ||||| |||||||  || ||| ||||||    
T  30875387 aaaatatagtttagtgatttaaataattgggaagtttaaaataatataatgtattcagtgggactcatttataccacacatatggaaggcatggatgtgg 30875486  T
Q  450 atgctct 456  Q
     ||||||    
T  30875487 gtgctct 30875493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 304 - 368
Target Start/End: Original strand, 4974593 - 4974657
Alignment:
Q  304 agtgggacccattttagagttttggatgagtggcatggatatttgaaaaatgtagttgagtggtt 368  Q
    |||| |||| ||||||||||||| || |||||| ||| ||||||  ||||| |||||||||||||    
T  4974593 agtgagacctattttagagtttttgaggagtggtatgaatatttagaaaatatagttgagtggtt 4974657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0867 (Bit Score: 90; Significance: 3e-43; HSPs: 1)
Name: scaffold0867
Description:

Target: scaffold0867; HSP #1
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 298 - 456
Target Start/End: Original strand, 3485 - 3627
Alignment:
Q  298 gaatttagtgggacccattttagagttttggatgagtggcatggatatttgaaaaatgtagttgagtggtttaaataattgagaagtgtgaagtaatata 397  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||                 |||||||||||||||||||||||    
T  3485 gaatttagtgggatccattttagagttttggatgagtggcatggatatttgaaaaatatat----------------attgagaagtgtgaagtaatata 3568  T
Q  398 atatattaagtggggtccatttaaaccacccatatgggtggaatgaatgtggatgctct 456  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  3569 atatattaagtggggtctatttaaaccacccatatgggtggaatgaatgtggatgctct 3627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 87; Significance: 2e-41; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 304 - 458
Target Start/End: Original strand, 56561 - 56715
Alignment:
Q  304 agtgggacccattttagagttttggatgagtggcatggatatttgaaaaatgtagttgagtggtttaaataattgagaagtgtgaagtaatataatatat 403  Q
    |||||||||||| |||||||||| || |||||| ||||||||||  ||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  56561 agtgggacccatattagagttttagaggagtggtatggatatttagaaaatgtagttgagtggtttaaataattgagaagtgtaaagtaatataatatat 56660  T
Q  404 taagtggggtccatttaaaccacccatatgggtggaatgaatgtggatgctctta 458  Q
    || |||||  ||||||| |||| |||| ||| ||| ||| |||||| ||||||||    
T  56661 tatgtgggtcccatttataccatccatttggatggcatggatgtggttgctctta 56715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 85; Significance: 3e-40; HSPs: 20)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 298 - 458
Target Start/End: Complemental strand, 16680040 - 16679880
Alignment:
Q  298 gaatttagtgggacccattttagagttttggatgagtggcatggatatttgaaaaatgtagttgagtggtttaaataattgagaagtgtgaagtaatata 397  Q
    ||||||||| ||| |||||||||||||||| |||||||| ||| |||||||||||||||| |||| ||||| ||||||||||||||||||||||||||||    
T  16680040 gaatttagtaggatccattttagagttttgaatgagtggtatgtatatttgaaaaatgtaattgaatggttaaaataattgagaagtgtgaagtaatata 16679941  T
Q  398 atatattaagtggggtccatttaaaccacccatatgggtggaatgaatgtggatgctctta 458  Q
    |||||    ||| |||||||| | |||||||||||| |||| ||  |||||||||||||||    
T  16679940 atatacagggtgaggtccattgataccacccatatgagtggcattgatgtggatgctctta 16679880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 304 - 458
Target Start/End: Original strand, 23570980 - 23571134
Alignment:
Q  304 agtgggacccattttagagttttggatgagtggcatggatatttgaaaaatgtagttgagtggtttaaataattgagaagtgtgaagtaatataatatat 403  Q
    |||||||| ||||||||||||||||| |||||| |||||||||| |||||| ||||||||| ||||||||||| || || |||||||||||||||| |||    
T  23570980 agtgggactcattttagagttttggaggagtggtatggatatttaaaaaatatagttgagttgtttaaataatggaaaaatgtgaagtaatataatgtat 23571079  T
Q  404 taagtggggtccatttaaaccacccatatgggtggaatgaatgtggatgctctta 458  Q
    || |||||  ||||||| ||||||||||||||||| ||| ||| || ||||||||    
T  23571080 tatgtgggacccatttataccacccatatgggtggtatggatgcgggtgctctta 23571134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 301 - 458
Target Start/End: Original strand, 50428448 - 50428605
Alignment:
Q  301 tttagtgggacccattttagagttttggatgagtggcatggatatttgaaaaatgtagttgagtggtttaaataattgagaagtgtgaagtaatataata 400  Q
    |||||||||||||| |||||||||||||| |||||| ||||||||||  ||||| |||||||||| |||||||||||||||||||||||||||||||||     
T  50428448 tttagtgggacccactttagagttttggaggagtggtatggatatttagaaaatatagttgagtgatttaaataattgagaagtgtgaagtaatataatt 50428547  T
Q  401 tattaagtggggtccatttaaaccacccatatgggtggaatgaatgtggatgctctta 458  Q
    ||||  ||| | |||||||| ||||||||||||  ||  ||| || ||||||||||||    
T  50428548 tattgcgtgagatccatttataccacccatatgaatgacatggatatggatgctctta 50428605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 302 - 456
Target Start/End: Complemental strand, 43496524 - 43496370
Alignment:
Q  302 ttagtgggacccattttagagttttggatgagtggcatggatatttgaaaaatgtagttgagtggtttaaataattgagaagtgtgaagtaatataatat 401  Q
    ||||||||||||||||||||||||   ||| |||| |||||||||| |||||||||||||| | ||||||||||||||||||||||| |||||||||| |    
T  43496524 ttagtgggacccattttagagtttataatgggtggtatggatatttaaaaaatgtagttgaatagtttaaataattgagaagtgtgaggtaatataatgt 43496425  T
Q  402 attaagtggggtccatttaaaccacccatatgggtggaatgaatgtggatgctct 456  Q
    |||| |||||  || |||| |||| ||| |||||||| ||| |||||||||||||    
T  43496424 attatgtgggacccgtttataccatccaaatgggtggcatggatgtggatgctct 43496370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 304 - 456
Target Start/End: Complemental strand, 7900280 - 7900128
Alignment:
Q  304 agtgggacccattttagagttttggatgagtggcatggatatttgaaaaatgtagttgagtggtttaaataattgagaagtgtgaagtaatataatatat 403  Q
    ||||||||||||||||||||||| || |||||| ||||||||||  ||||||||||||||||||||||||||||| ||||| | ||||||||||||||||    
T  7900280 agtgggacccattttagagttttagaggagtggtatggatatttagaaaatgtagttgagtggtttaaataattgggaagtataaagtaatataatatat 7900181  T
Q  404 taagtggggtccatttaaaccacccatatgggtggaatgaatgtggatgctct 456  Q
    || |||||  ||||||| || | |||| | ||||| ||| |||||| ||||||    
T  7900180 tatgtgggtcccatttatacgatccatttaggtggcatggatgtgggtgctct 7900128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 304 - 456
Target Start/End: Complemental strand, 37457748 - 37457596
Alignment:
Q  304 agtgggacccattttagagttttggatgagtggcatggatatttgaaaaatgtagttgagtggtttaaataattgagaagtgtgaagtaatataatatat 403  Q
    ||||||||| |||||| ||||||||| |||||| ||| ||||||  ||||| |||||||||||||| ||||||||||||||||||| ||||||| | |||    
T  37457748 agtgggacctattttaaagttttggaagagtggtatgtatatttagaaaatatagttgagtggttttaataattgagaagtgtgaaataatatattgtat 37457649  T
Q  404 taagtggggtccatttaaaccacccatatgggtggaatgaatgtggatgctct 456  Q
    || |||||  ||||||| |||||| ||||||||||  || |||||||||||||    
T  37457648 tacgtgggacccatttataccacctatatgggtggtgtggatgtggatgctct 37457596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 302 - 458
Target Start/End: Complemental strand, 51613380 - 51613224
Alignment:
Q  302 ttagtgggacccattttagagttttggatgagtggcatggatatttgaaaaatgtagttgagtggtttaaataattgagaagtgtgaagtaatataatat 401  Q
    |||||||||||||||||| ||||||||| |||||| |||  |||||  |||||||||||||||||||||||||||||  ||||||||||||||||||  |    
T  51613380 ttagtgggacccatttta-agttttggaagagtggtatgagtatttagaaaatgtagttgagtggtttaaataattggaaagtgtgaagtaatataaatt 51613282  T
Q  402 attaagtggggtccatttaaaccacccatat-gggtggaatgaatgtggatgctctta 458  Q
    |||| ||||| |||||||| ||||| ||||| | |||  |||||||| ||||||||||    
T  51613281 attatgtgggatccatttataccactcatatagagtgacatgaatgtagatgctctta 51613224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 314 - 458
Target Start/End: Complemental strand, 1035859 - 1035715
Alignment:
Q  314 attttagagttttggatgagtggcatggatatttgaaaaatgtagttgagtggtttaaataattgagaagtgtgaagtaatataatatattaagtggggt 413  Q
    |||||| ||||||||| |||||| ||| ||||||  ||||| ||||| |||||||||||||||||||||||||||| ||||||| | |||||  ||||      
T  1035859 attttaaagttttggaagagtggtatgtatatttagaaaatatagtttagtggtttaaataattgagaagtgtgaaataatatattgtattacatgggac 1035760  T
Q  414 ccatttaaaccacccatatgggtggaatgaatgtggatgctctta 458  Q
    |||| || |||||||||||| |||| ||| |||||||||||||||    
T  1035759 ccatatataccacccatatgagtggtatggatgtggatgctctta 1035715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 304 - 456
Target Start/End: Original strand, 19993349 - 19993501
Alignment:
Q  304 agtgggacccattttagagttttggatgagtggcatggatatttgaaaaatgtagttgagtggtttaaataattgagaagtgtgaagtaatataatatat 403  Q
    |||| |||| ||||||||||||| || |||||| ||||||||||  ||||| |||||||||||||||||||||| | |||||| ||||||||||||||||    
T  19993349 agtgtgacctattttagagttttagaggagtggtatggatatttagaaaatatagttgagtggtttaaataattaaaaagtgtaaagtaatataatatat 19993448  T
Q  404 taagtggggtccatttaaaccacccatatgggtggaatgaatgtggatgctct 456  Q
    || ||||   |||| || ||||||||| || || | ||| |||||||||||||    
T  19993449 tatgtggatcccatctataccacccatttgagttgcatggatgtggatgctct 19993501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 304 - 402
Target Start/End: Original strand, 19322793 - 19322891
Alignment:
Q  304 agtgggacccattttagagttttggatgagtggcatggatatttgaaaaatgtagttgagtggtttaaataattgagaagtgtgaagtaatataatata 402  Q
    ||||||| | ||||||||||||||||  ||||| |||||||||| |||||||||||||| ||||||||||||||||||||| || ||||||||||||||    
T  19322793 agtgggatctattttagagttttggagaagtggtatggatatttaaaaaatgtagttgaatggtttaaataattgagaagtatgtagtaatataatata 19322891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 308 - 458
Target Start/End: Complemental strand, 47394492 - 47394340
Alignment:
Q  308 ggacccattttagagttttggatgagtggcatggatatttgaaaaatgtagttgagtggtttaaataattgagaagtgtgaagtaatataatatattaag 407  Q
    |||||||||||||| |||| || |||||| ||| |||||| ||||||||||  |||| ||||||||||||| |||||||||||||||||||| ||||| |    
T  47394492 ggacccattttagacttttagaagagtggtatgaatatttaaaaaatgtagacgagtagtttaaataattgggaagtgtgaagtaatataatgtattatg 47394393  T
Q  408 tggggtccatttaaaccacccatatgg--gtggaatgaatgtggatgctctta 458  Q
    |||   ||||||| || || || ||||  |||| ||| |||||||||||||||    
T  47394392 tggaacccatttatactactcaaatgggtgtggtatggatgtggatgctctta 47394340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 309 - 404
Target Start/End: Complemental strand, 27641638 - 27641543
Alignment:
Q  309 gacccattttagagttttggatgagtggcatggatatttgaaaaatgtagttgagtggtttaaataattgagaagtgtgaagtaatataatatatt 404  Q
    ||||||||||| |||||| ||||||||| ||||||||||| ||||| |||||| ||||||||||||| |||||||| |||| ||||||||| ||||    
T  27641638 gacccattttaaagttttagatgagtggtatggatatttggaaaatttagttgggtggtttaaataactgagaagtatgaactaatataatgtatt 27641543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 302 - 398
Target Start/End: Original strand, 46823604 - 46823699
Alignment:
Q  302 ttagtgggacccattttagagttttggatgagtggcatggatatttgaaaaatgtagttgagtggtttaaataattgagaagtgtgaagtaatataa 398  Q
    ||||||||||||||| || ||||||| | || ||| |||||| |||  |||||||||||||||||||||||||||||| ||||||||||||||||||    
T  46823604 ttagtgggacccattata-agttttgtaagaatggtatggatgtttagaaaatgtagttgagtggtttaaataattgaaaagtgtgaagtaatataa 46823699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 302 - 458
Target Start/End: Original strand, 7167968 - 7168124
Alignment:
Q  302 ttagtgggacccattttagagttttggatgagtggcatggatattt-gaaaaatgtagttgagtggtttaaataattgagaagtgtgaagtaatataata 400  Q
    |||||| |||| |||||||||||||||| |||| |  ||||||||| |||||||||||||| ||||||||||||||||  || ||| ||||||||||| |    
T  7167968 ttagtgagacctattttagagttttgga-gagtcgtgtggatatttagaaaaatgtagttgggtggtttaaataattggaaaatgtaaagtaatataaaa 7168066  T
Q  401 tattaagtggggtccatttaaaccacccatatgggtggaatgaatgtggatgctctta 458  Q
    ||||| ||| |  ||||||| || || ||||||||||  ||| |||||  ||||||||    
T  7168067 tattatgtgagacccatttatactactcatatgggtgacatggatgtgagtgctctta 7168124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 302 - 398
Target Start/End: Original strand, 26707096 - 26707191
Alignment:
Q  302 ttagtgggacccattttagagttttggatgagtggcatggatatttgaaaaatgtagttgagtggtttaaataattgagaagtgtgaagtaatataa 398  Q
    |||||||||| |||| || ||||||| | |||||| ||| ||||||  ||||||||||||| |||||||||||||||| ||||||||| ||||||||    
T  26707096 ttagtgggactcattgta-agttttgtaagagtggtatgaatatttagaaaatgtagttgaatggtttaaataattgaaaagtgtgaactaatataa 26707191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 319 - 410
Target Start/End: Original strand, 10574351 - 10574442
Alignment:
Q  319 agagttttggatgagtggcatggatatttgaaaaatgtagttgagtggtttaaataattgagaagtgtgaagtaatataatatattaagtgg 410  Q
    ||||| || ||||||| | ||| |||||| |||||| || ||||||| |||||||||||||||| |||||||||||||| ||||||| ||||    
T  10574351 agagtattagatgagtagtatgaatatttaaaaaatataattgagtgatttaaataattgagaaatgtgaagtaatatattatattatgtgg 10574442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 298 - 387
Target Start/End: Complemental strand, 19466428 - 19466340
Alignment:
Q  298 gaatttagtgggacccattttagagttttggatgagtggcatggatatttgaaaaatgtagttgagtggtttaaataattgagaagtgtg 387  Q
    ||||||||||||||| ||| |||| | |||||||||| | || ||||||| |||||| |||| |||| ||||||||||||||||||||||    
T  19466428 gaatttagtgggacctattgtaga-tattggatgagtagtattgatatttaaaaaatatagtggagtagtttaaataattgagaagtgtg 19466340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 381 - 420
Target Start/End: Original strand, 30784690 - 30784729
Alignment:
Q  381 aagtgtgaagtaatataatatattaagtggggtccattta 420  Q
    |||||||||| |||||||||||| ||||||||||||||||    
T  30784690 aagtgtgaagaaatataatatatcaagtggggtccattta 30784729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 309 - 458
Target Start/End: Complemental strand, 30717551 - 30717402
Alignment:
Q  309 gacccattttagagttttggatgagtggcatggatatttgaaaaatgtagttgagtggtttaaataattgagaagtgtgaagtaatataatatattaagt 408  Q
    |||| |||||| | |||| ||| || |||||| |||||| |||||||||  |||||  ||||||||||| | |||  | || ||||||||| |||| | |    
T  30717551 gacctattttaaaattttagataagcggcatgaatatttaaaaaatgtaagtgagtaatttaaataattaaaaagcataaaataatataatgtattgaat 30717452  T
Q  409 ggggtccatttaaaccacccatatgggtggaatgaatgtggatgctctta 458  Q
     |||||||||||  ||| |||||| | ||| ||| |||||| ||||||||    
T  30717451 agggtccatttattccatccatatagatggtatggatgtgggtgctctta 30717402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 306 - 378
Target Start/End: Original strand, 29058575 - 29058647
Alignment:
Q  306 tgggacccattttagagttttggatgagtggcatggatatttgaaaaatgtagttgagtggtttaaataattg 378  Q
    |||||||||||||| | |||| || |||||| ||| |||||| || |||||  ||||||| ||||||||||||    
T  29058575 tgggacccattttaaaattttagaagagtggtatgaatatttaaagaatgtgattgagtgatttaaataattg 29058647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 84; Significance: 1e-39; HSPs: 25)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 304 - 427
Target Start/End: Original strand, 43598799 - 43598922
Alignment:
Q  304 agtgggacccattttagagttttggatgagtggcatggatatttgaaaaatgtagttgagtggtttaaataattgagaagtgtgaagtaatataatatat 403  Q
    |||| ||| ||||||| |||||| ||||||||| ||| ||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||    
T  43598799 agtgagactcattttaaagttttagatgagtggtatgaatatttgaaaaatatagttgagtggtttaaataattgagaagtgtgaactaatataatatat 43598898  T
Q  404 taagtggggtccatttaaaccacc 427  Q
    ||||| ||||||||||| ||||||    
T  43598899 taagtagggtccatttataccacc 43598922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 301 - 455
Target Start/End: Original strand, 36725761 - 36725915
Alignment:
Q  301 tttagtgggacccattttagagttttggatgagtggcatggatatttgaaaaatgtagttgagtggtttaaataattgagaagtgtgaagtaatataata 400  Q
    |||||| ||||||||||||||||||| ||||| ||| ||| ||||||  ||| ||||||||||||||||||||||||||||||||| || ||||||||      
T  36725761 tttagtaggacccattttagagtttttgatgaatggtatgaatatttagaaattgtagttgagtggtttaaataattgagaagtgtaaaataatataaag 36725860  T
Q  401 tattaagtggggtccatttaaaccacccatatgggtggaatgaatgtggatgctc 455  Q
     |||||||||| |||||||| ||||||||| || |||| ||| ||||||||||||    
T  36725861 aattaagtgggatccatttataccacccatgtgagtggtatggatgtggatgctc 36725915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 302 - 456
Target Start/End: Original strand, 48252859 - 48253013
Alignment:
Q  302 ttagtgggacccattttagagttttggatgagtggcatggatattt-gaaaaatgtagttgagtggtttaaataattgagaagtgtgaagtaatataata 400  Q
    ||||||| ||| |||||||||||||||| |||||| |||||||||| |||||||||||||||||||||||||||||||  |||||||||||||||||| |    
T  48252859 ttagtggtacctattttagagttttgga-gagtggtatggatatttagaaaaatgtagttgagtggtttaaataattggaaagtgtgaagtaatataaaa 48252957  T
Q  401 tattaagtggggtccatttaaaccacccatatgggtggaatgaatgtggatgctct 456  Q
    |||||  ||||  ||||||| || || ||||||||||| ||| |||||| ||||||    
T  48252958 tattatatgggacccatttatactactcatatgggtggcatggatgtgggtgctct 48253013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 312 - 456
Target Start/End: Original strand, 44396369 - 44396513
Alignment:
Q  312 ccattttagagttttggatgagtggcatggatatttgaaaaatgtagttgagtggtttaaataattgagaagtgtgaagtaatataatatattaagtggg 411  Q
    ||||||||||||||| || |||||| ||| ||||||  ||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||| ||||     
T  44396369 ccattttagagttttagaggagtggtatgaatatttagaaaatgtagttgagtgggttaaataattgggaagtgtaaagtaatataatatattatgtgga 44396468  T
Q  412 gtccatttaaaccacccatatgggtggaatgaatgtggatgctct 456  Q
      ||||||| |||| |||| ||||||| ||| |||||| ||||||    
T  44396469 tcccatttataccatccatttgggtggcatggatgtggttgctct 44396513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 301 - 456
Target Start/End: Original strand, 43692521 - 43692676
Alignment:
Q  301 tttagtgggacccattttagagttttggatgagtggcatggatatttgaaaaatgtagttgagtggtttaaataattgagaagtgtgaagtaatataata 400  Q
    |||| |||||||||||||| |||||| || |||||| ||  |||||| |||||| ||| |||||||||||||||||||||||||||||| |||||||||     
T  43692521 tttaatgggacccattttaaagttttagaagagtggtataaatatttaaaaaatttagatgagtggtttaaataattgagaagtgtgaaataatataatg 43692620  T
Q  401 tattaagtggggtccatttaaaccacccatatgggtggaatgaatgtggatgctct 456  Q
    ||||| |||||  | ||||| ||||  || ||| |||| |||||| ||||||||||    
T  43692621 tattatgtgggacctatttataccattcaaatgagtggtatgaatatggatgctct 43692676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 302 - 404
Target Start/End: Original strand, 40160313 - 40160415
Alignment:
Q  302 ttagtgggacccattttagagttttggatgagtggcatggatatttgaaaaatgtagttgagtggtttaaataattgagaagtgtgaagtaatataatat 401  Q
    ||||||||| |||||||| | ||||||||| || | |||||||||| |||| | ||||||||| |||||||||||||||||| || ||||||||||||||    
T  40160313 ttagtgggatccattttaaaattttggatgggtagtatggatatttaaaaattttagttgagttgtttaaataattgagaagcgttaagtaatataatat 40160412  T
Q  402 att 404  Q
    |||    
T  40160413 att 40160415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 306 - 460
Target Start/End: Complemental strand, 49080887 - 49080734
Alignment:
Q  306 tgggacccattttagagttttggatgagtggcatggatatttgaaaaatgtagttgagtggtttaaataattgagaagtgtgaagtaatataatatatta 405  Q
    |||||||||||||||||| || || || | | || ||||||| |||||||||||  |||||||||||||||||| |||||||||||||||||||||||||    
T  49080887 tgggacccattttagagtattagaagattagtattgatatttaaaaaatgtagta-agtggtttaaataattgaaaagtgtgaagtaatataatatatta 49080789  T
Q  406 agtggggtccatttaaaccacccatatgggtggaatgaatgtggatgctcttact 460  Q
     ||  |  ||||||| || || ||||||| ||  ||| |||||| ||||||||||    
T  49080788 tgtaagacccatttatacaactcatatggatgacatggatgtgggtgctcttact 49080734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 305 - 456
Target Start/End: Complemental strand, 38346530 - 38346378
Alignment:
Q  305 gtgggacccattttagagttttggatgagtggcatggatatttgaaaaatgtagttgagtggtttaaataattgagaagtgtgaagtaata-taatatat 403  Q
    |||||||||| |||| |||||| ||||||| | ||  |||||| ||||||||||||||||||||||||||||| | || | |||||||||| | ||||||    
T  38346530 gtgggacccaatttaaagttttagatgagttgtataaatatttaaaaaatgtagttgagtggtttaaataattaaaaaatatgaagtaatatttatatat 38346431  T
Q  404 taagtggggtccatttaaaccacccatatgggtggaatgaatgtggatgctct 456  Q
    ||  ||||||||||||| |||| | || ||| ||  ||| |||||||||||||    
T  38346430 tatatggggtccatttataccatcaatgtggatgatatggatgtggatgctct 38346378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 304 - 449
Target Start/End: Complemental strand, 32485573 - 32485437
Alignment:
Q  304 agtgggacccattttagagttttggatgagtggcatggatatttgaaaaatgtagttgagtggtttaaataattgagaagtgtgaagtaatataatatat 403  Q
    |||||||||||||||||||||||||| |||||| ||||||||||         || | |||||||||||||||| ||||| ||||||||||||||| |||    
T  32485573 agtgggacccattttagagttttggaggagtggtatggatattt---------agataagtggtttaaataattaagaagcgtgaagtaatataatgtat 32485483  T
Q  404 taagtggggtccatttaaaccacccatatgggtggaatgaatgtgg 449  Q
    || |||||  ||||| | |||||| ||||| |||| ||| ||||||    
T  32485482 tatgtgggacccattgataccaccgatatgagtggtatggatgtgg 32485437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 318 - 422
Target Start/End: Complemental strand, 8099733 - 8099629
Alignment:
Q  318 tagagttttggatgagtggcatggatatttgaaaaatgtagttgagtggtttaaataattgagaagtgtgaagtaatataatatattaagtggggtccat 417  Q
    ||||||||||||||||| | ||  |||||| |||||||||||||| |  ||||||  ||| | |||||||||||||||||||||||||||||| ||||||    
T  8099733 tagagttttggatgagttgtataaatatttaaaaaatgtagttgaattatttaaaatattcaaaagtgtgaagtaatataatatattaagtggagtccat 8099634  T
Q  418 ttaaa 422  Q
     ||||    
T  8099633 ataaa 8099629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 308 - 402
Target Start/End: Complemental strand, 38994909 - 38994815
Alignment:
Q  308 ggacccattttagagttttggatgagtggcatggatatttgaaaaatgtagttgagtggtttaaataattgagaagtgtgaagtaatataatata 402  Q
    |||||||||||| | |||||||||||| | |||||||||| ||||||||| |||| |  |||||| |||||| |||| |||||||||||||||||    
T  38994909 ggacccattttaaaattttggatgagttgtatggatatttcaaaaatgtaattgaattatttaaaaaattgacaagtatgaagtaatataatata 38994815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 305 - 404
Target Start/End: Complemental strand, 36118156 - 36118058
Alignment:
Q  305 gtgggacccattttagagttttggatgagtggcatggatatttgaaaaatgtagttgagtggtttaaataattgagaagtgtgaagtaatataatatatt 404  Q
    ||||||||||||||| ||||||| | |||| | ||| ||||||  |||||||| |||||||||||||||||| ||||||||| || ||||||||| ||||    
T  36118156 gtgggacccattttaaagttttgaa-gagtagtatgaatatttagaaaatgtaattgagtggtttaaataatagagaagtgttaaataatataatgtatt 36118058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 302 - 420
Target Start/End: Complemental strand, 8404872 - 8404755
Alignment:
Q  302 ttagtgggacccattttagagttttggatgagtggcatggatatttgaaaaatgtagttgagtggtttaaataattgagaagtgtgaagtaatataatat 401  Q
    ||||||||| ||||| || ||||| | | ||||||  ||||||||| ||||||||| ||||||||||||||||||||  ||||||||| ||||||||  |    
T  8404872 ttagtgggatccattgta-agtttcgtaagagtggtgtggatatttaaaaaatgtaattgagtggtttaaataattggaaagtgtgaaataatataaagt 8404774  T
Q  402 attaagtggggtccattta 420  Q
    |||| |||||  |||||||    
T  8404773 attacgtgggacccattta 8404755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 323 - 397
Target Start/End: Original strand, 23869931 - 23870005
Alignment:
Q  323 ttttggatgagtggcatggatatttgaaaaatgtagttgagtggtttaaataattgagaagtgtgaagtaatata 397  Q
    |||||||||||||| ||||||||||  ||||| ||||| ||| ||||||| |||||| |||||||||||||||||    
T  23869931 ttttggatgagtggtatggatatttagaaaatatagttaagtagtttaaaaaattgaaaagtgtgaagtaatata 23870005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 358 - 427
Target Start/End: Complemental strand, 41159436 - 41159367
Alignment:
Q  358 gttgagtggtttaaataattgagaagtgtgaagtaatataatatattaagtggggtccatttaaaccacc 427  Q
    ||||||| |||||||||||||  ||||||||| |||||||||||||| ||||| ||||||||| ||||||    
T  41159436 gttgagttgtttaaataattggaaagtgtgaaataatataatatattgagtggcgtccatttataccacc 41159367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 350 - 406
Target Start/End: Complemental strand, 12879333 - 12879277
Alignment:
Q  350 aaaatgtagttgagtggtttaaataattgagaagtgtgaagtaatataatatattaa 406  Q
    ||||| |||||| || ||||||||||||||||||||||||||||||||| |||||||    
T  12879333 aaaatatagttgtgttgtttaaataattgagaagtgtgaagtaatataaaatattaa 12879277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 384 - 458
Target Start/End: Complemental strand, 23772892 - 23772819
Alignment:
Q  384 tgtgaagtaatataatatattaagtggggtccatttaaaccacccatatgggtggaatgaatgtggatgctctta 458  Q
    |||||| ||||||||||||||||||||| |||||||| ||||||||||||  ||  ||| |||||||||||||||    
T  23772892 tgtgaaataatataatatattaagtggg-tccatttataccacccatatgaatgacatggatgtggatgctctta 23772819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 300 - 460
Target Start/End: Original strand, 46700822 - 46700982
Alignment:
Q  300 atttagtgggacccattttagagttttggatgagtggcatggatatttgaaaaatgtagttgagtggtttaaataattgagaagtgtgaagtaatataat 399  Q
    ||||||||||| ||||| ||   ||||| |||||| | ||| ||||||  ||||| || |  |||||||||||||||||||||||||||| || |||||     
T  46700822 atttagtgggatccattgtaattttttgaatgagtagtatgaatatttagaaaatataatatagtggtttaaataattgagaagtgtgaaatagtataaa 46700921  T
Q  400 atattaagtggggtccatttaaaccacccatatgggtggaatgaatgtggatgctcttact 460  Q
      |||||||| |  ||||||| || || ||||||| ||  ||| ||||| |||||||||||    
T  46700922 gaattaagtgagagccatttatacaactcatatggatgacatggatgtgtatgctcttact 46700982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 306 - 364
Target Start/End: Complemental strand, 41159519 - 41159461
Alignment:
Q  306 tgggacccattttagagttttggatgagtggcatggatatttgaaaaatgtagttgagt 364  Q
    |||||||||||| ||||||||||||| |||| ||||||||||  ||||||| |||||||    
T  41159519 tgggacccatttgagagttttggatgggtggtatggatatttagaaaatgtggttgagt 41159461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 338 - 426
Target Start/End: Complemental strand, 22790523 - 22790435
Alignment:
Q  338 atggatatttgaaaaatgtagttgagtggtttaaataattgagaagtgtgaagtaatataatatattaagtggggtccatttaaaccac 426  Q
    ||||||||| ||||||||||||||| | |||||||||||||| ||| || || ||||| || |||||  ||| | |||||||| |||||    
T  22790523 atggatattagaaaaatgtagttgaattgtttaaataattgaaaagcgtaaaataatacaaaatattgtgtgagatccatttataccac 22790435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 314 - 377
Target Start/End: Complemental strand, 29681523 - 29681460
Alignment:
Q  314 attttagagttttggatgagtggcatggatatttgaaaaatgtagttgagtggtttaaataatt 377  Q
    |||||||| |||| ||||||||  ||||||||||  ||||||||||| ||||||| ||||||||    
T  29681523 attttagaattttagatgagtgatatggatatttataaaatgtagttaagtggttcaaataatt 29681460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 305 - 373
Target Start/End: Complemental strand, 23774637 - 23774569
Alignment:
Q  305 gtgggacccattttagagttttggatgagtggcatggatatttgaaaaatgtagttgagtggtttaaat 373  Q
    |||||| |||||||||||||||||||   ||| ||| ||||||  ||| | ||||||||||||||||||    
T  23774637 gtgggatccattttagagttttggatagatggtatgaatattttgaaagtatagttgagtggtttaaat 23774569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 341 - 381
Target Start/End: Original strand, 37626914 - 37626954
Alignment:
Q  341 gatatttgaaaaatgtagttgagtggtttaaataattgaga 381  Q
    ||||||| |||||| ||||||||| ||||||||||||||||    
T  37626914 gatatttaaaaaatatagttgagttgtttaaataattgaga 37626954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 312 - 372
Target Start/End: Original strand, 42691361 - 42691421
Alignment:
Q  312 ccattttagagttttggatgagtggcatggatatttgaaaaatgtagttgagtggtttaaa 372  Q
    |||||||| | ||||  |||||||| ||| |||||| |||||||||||||||| |||||||    
T  42691361 ccattttaaaattttaaatgagtggtatgaatatttaaaaaatgtagttgagtcgtttaaa 42691421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 316 - 456
Target Start/End: Original strand, 49081222 - 49081362
Alignment:
Q  316 tttagagttttggatgagtggcatggatatttgaaaaatgtagttgagtggtttaaataattgagaagtgtgaagtaatataatatattaagtggggtcc 415  Q
    |||| |||||| ||||||||| ||  ||||||  ||||||||| ||| || ||||||||||||| || | | || ||||||||| |||||  || |  ||    
T  49081222 tttaaagttttagatgagtggtataaatatttagaaaatgtagatgaatgatttaaataattgaaaaatataaaataatataatgtattatatgagaccc 49081321  T
Q  416 atttaaaccacccatatgggtggaatgaatgtggatgctct 456  Q
    ||||| |||| | |||||||||| ||| |||  ||||||||    
T  49081322 atttataccatctatatgggtggtatggatgctgatgctct 49081362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 81; Significance: 6e-38; HSPs: 20)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 302 - 458
Target Start/End: Original strand, 34769540 - 34769696
Alignment:
Q  302 ttagtgggacccattttagagttttggatgagtggcatggatatttgaaaaatgtagttgagtggtttaaataattgagaagtgtgaagtaatataatat 401  Q
    ||||||||||||||||||||||||   ||| |||| |||||||||| |||||||||||||| ||||||||||||||| ||||||||| |||||||||| |    
T  34769540 ttagtgggacccattttagagtttataatgggtggtatggatatttaaaaaatgtagttgaatggtttaaataattgggaagtgtgaggtaatataatgt 34769639  T
Q  402 attaagtggggtccatttaaaccacccatatgggtggaatgaatgtggatgctctta 458  Q
    |||| |||||  || |||| |||||||| |||| ||| ||| |||||||||||||||    
T  34769640 attatgtgggacccgtttataccacccaaatggatggcatggatgtggatgctctta 34769696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 304 - 458
Target Start/End: Complemental strand, 39060321 - 39060167
Alignment:
Q  304 agtgggacccattttagagttttggatgagtggcatggatatttgaaaaatgtagttgagtggtttaaataattgagaagtgtgaagtaatataatatat 403  Q
    ||||||||| |||||| |||||| || |||||  ||||||||||  ||||| ||||||||||||||||||||| || ||||||||||||||||||| |||    
T  39060321 agtgggacctattttaaagttttagaggagtgatatggatatttagaaaatatagttgagtggtttaaataatcgaaaagtgtgaagtaatataatgtat 39060222  T
Q  404 taagtggggtccatttaaaccacccatatgggtggaatgaatgtggatgctctta 458  Q
    || |||||  ||||||| ||||||||||| ||||  ||| |||||| ||||||||    
T  39060221 tatgtgggacccatttataccacccatataggtgatatgtatgtgggtgctctta 39060167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 304 - 397
Target Start/End: Complemental strand, 4925191 - 4925098
Alignment:
Q  304 agtgggacccattttagagttttggatgagtggcatggatatttgaaaaatgtagttgagtggtttaaataattgagaagtgtgaagtaatata 397  Q
    |||| |||| |||||||||||||||| |||||  |||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||    
T  4925191 agtgagacctattttagagttttggaagagtgatatggatatttaaaaaatgtagttgagtggtttaaataattgaaaagtgtgaagtaatata 4925098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 298 - 432
Target Start/End: Original strand, 23089292 - 23089426
Alignment:
Q  298 gaatttagtgggacccattttagagttttggatgagtggcatggatatttgaaaaatgtagttgagtggtttaaataattgagaagtgtgaagtaatata 397  Q
    |||||||||||||| ||||||| |||||| ||||||||| ||| |||||| |||||||| | |||||| ||||||||||||  || |||||| |||||||    
T  23089292 gaatttagtgggactcattttaaagttttagatgagtggtatgaatatttaaaaaatgtggatgagtgatttaaataattggaaaatgtgaaataatata 23089391  T
Q  398 atatattaagtggggtccatttaaaccacccatat 432  Q
    ||||||||  |||| |||||||| |||| ||||||    
T  23089392 atatattatatgggatccatttataccatccatat 23089426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 305 - 437
Target Start/End: Complemental strand, 14593988 - 14593856
Alignment:
Q  305 gtgggacccattttagagttttggatgagtggcatggatatttgaaaaatgtagttgagtggtttaaataattgagaagtgtgaagtaatataatatatt 404  Q
    |||||||| |||||| |||| || | |||||| ||| ||||||  |||||||| |||| ||||||||||||||||||  |||||||||||||||||||||    
T  14593988 gtgggacctattttacagttatgaaagagtggtatgaatatttataaaatgtaattgaatggtttaaataattgagatttgtgaagtaatataatatatt 14593889  T
Q  405 aagtggggtccatttaaaccacccatatgggtg 437  Q
     ||||| ||||||||| ||||  ||||||||||    
T  14593888 gagtggagtccatttataccattcatatgggtg 14593856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 355 - 456
Target Start/End: Original strand, 35211935 - 35212036
Alignment:
Q  355 gtagttgagtggtttaaataattgagaagtgtgaagtaatataatatattaagtggggtccatttaaaccacccatatgggtggaatgaatgtggatgct 454  Q
    ||||||||||||||||||||| || ||||||| ||||||||||||||| || |||||  ||||||| |||||| || ||||||| |||||||||||||||    
T  35211935 gtagttgagtggtttaaataactgggaagtgtaaagtaatataatataatatgtgggacccatttataccacctatttgggtggcatgaatgtggatgct 35212034  T
Q  455 ct 456  Q
    ||    
T  35212035 ct 35212036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 333 - 456
Target Start/End: Complemental strand, 10523927 - 10523804
Alignment:
Q  333 gtggcatggatatttgaaaaatgtagttgagtggtttaaataattgagaagtgtgaagtaatataatatattaagtggggtccatttaaaccacccatat 432  Q
    |||| ||| ||||||  ||||||||  |||||||||||||||||| | |||||| || ||||||||| |||| ||||||||||||||| |||||| ||||    
T  10523927 gtggtatgaatatttagaaaatgtaagtgagtggtttaaataattaaaaagtgtaaaataatataatgtattgagtggggtccatttataccaccaatat 10523828  T
Q  433 gggtggaatgaatgtggatgctct 456  Q
    |||||  ||| |||||| ||||||    
T  10523827 gggtgacatggatgtgggtgctct 10523804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 349 - 458
Target Start/End: Original strand, 37902402 - 37902512
Alignment:
Q  349 aaaaatgtagttgagtggtttaaa-taattgagaagtgtgaagtaatataatatattaagtggggtccatttaaaccacccatatgggtggaatgaatgt 447  Q
    |||||||||||||||| ||||||| || ||||||||||| |||||||||||||||| | |||||   |||||| |||||| |||||||||| ||| ||||    
T  37902402 aaaaatgtagttgagtagtttaaaatatttgagaagtgtaaagtaatataatatataatgtgggtctcatttataccaccaatatgggtggcatggatgt 37902501  T
Q  448 ggatgctctta 458  Q
    || ||||||||    
T  37902502 ggttgctctta 37902512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 341 - 403
Target Start/End: Original strand, 34383709 - 34383771
Alignment:
Q  341 gatatttgaaaaatgtagttgagtggtttaaataattgagaagtgtgaagtaatataatatat 403  Q
    |||||||  |||||||||||  |||||||||||||||||||||||| ||||||||||||||||    
T  34383709 gatatttagaaaatgtagttttgtggtttaaataattgagaagtgtaaagtaatataatatat 34383771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 356 - 456
Target Start/End: Complemental strand, 35205223 - 35205123
Alignment:
Q  356 tagttgagtggtttaaataattgagaagtgtgaagtaatataatatattaagtggggtccatttaaaccacccatatgggtggaatgaatgtggatgctc 455  Q
    ||||||||| |||||||||| || ||||||| ||||||||||||||| || |||||  ||||||| |||||| || ||||||| ||| || ||| |||||    
T  35205223 tagttgagttgtttaaataactgggaagtgtaaagtaatataatataatatgtgggacccatttataccacctatttgggtggcatggatttgggtgctc 35205124  T
Q  456 t 456  Q
    |    
T  35205123 t 35205123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 338 - 398
Target Start/End: Original strand, 9959324 - 9959384
Alignment:
Q  338 atggatatttgaaaaatgtagttgagtggtttaaataattgagaagtgtgaagtaatataa 398  Q
    ||||||||||  ||||||||||||||| |||||||||||||  |||||||||||| |||||    
T  9959324 atggatatttagaaaatgtagttgagtagtttaaataattggaaagtgtgaagtagtataa 9959384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 342 - 420
Target Start/End: Complemental strand, 2907856 - 2907778
Alignment:
Q  342 atatttgaaaaatgtagttgagtggtttaaataattgagaagtgtgaagtaatataatatattaagtggggtccattta 420  Q
    |||||| ||||||| |||||||| ||||||||||||  ||| ||||||||||| ||| |||||  || |||||||||||    
T  2907856 atattttaaaaatgaagttgagttgtttaaataattaggaaatgtgaagtaatgtaaaatattgtgtagggtccattta 2907778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 365 - 455
Target Start/End: Complemental strand, 14947747 - 14947657
Alignment:
Q  365 ggtttaaataattgagaagtgtgaagtaatataatatattaagtggggtccatttaaaccacccatatgggtggaatgaatgtggatgctc 455  Q
    ||||||||||||||| |||| | ||||||||||| |||||| ||||| |||||||| |||| | |||||| ||  ||| |||||| |||||    
T  14947747 ggtttaaataattgaaaagtataaagtaatataaaatattatgtgggatccatttataccatctatatggatgacatggatgtgggtgctc 14947657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 305 - 377
Target Start/End: Complemental strand, 7011864 - 7011792
Alignment:
Q  305 gtgggacccattttagagttttggatgagtggcatggatatttgaaaaatgtagttgagtggtttaaataatt 377  Q
    ||||||| || ||||||||||| ||| ||||  ||| ||||||||||||||||||||  || |||||||||||    
T  7011864 gtgggactcaatttagagttttagataagtgatatgaatatttgaaaaatgtagttggctgctttaaataatt 7011792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 333 - 433
Target Start/End: Complemental strand, 14913556 - 14913456
Alignment:
Q  333 gtggcatggatatttgaaaaatgtagttgagtggtttaaataattgagaagtgtgaagtaatataatatattaagtggggtccatttaaaccacccatat 432  Q
    |||| ||| ||||||  ||||| ||||| ||| |||||||||||||| |||||| || ||||||||| |||| |||  |  ||||||| |||||||||||    
T  14913556 gtggtatgaatatttagaaaatatagtttagtagtttaaataattgaaaagtgtaaaataatataatgtatttagtatgacccatttataccacccatat 14913457  T
Q  433 g 433  Q
    |    
T  14913456 g 14913456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 338 - 389
Target Start/End: Original strand, 38697910 - 38697961
Alignment:
Q  338 atggatatttgaaaaatgtagttgagtggtttaaataattgagaagtgtgaa 389  Q
    |||||||||| |||||| |||||||| |||||||||||| | ||||||||||    
T  38697910 atggatatttaaaaaatttagttgagaggtttaaataatagggaagtgtgaa 38697961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 389 - 456
Target Start/End: Original strand, 38698221 - 38698288
Alignment:
Q  389 agtaatataatatattaagtggggtccatttaaaccacccatatgggtggaatgaatgtggatgctct 456  Q
    ||||||||||| |||| |||||| |||||||| ||||| |||||| || | ||| |||||||||||||    
T  38698221 agtaatataatgtattcagtgggatccatttataccactcatatgagtagtatggatgtggatgctct 38698288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 359 - 433
Target Start/End: Original strand, 10924281 - 10924355
Alignment:
Q  359 ttgagtggtttaaataattgagaagtgtgaagtaatataatatattaagtggggtccatttaaaccacccatatg 433  Q
    ||||||||||| ||||||| | |||| |||||||||||| | |||| | ||||||| ||||| ||||| ||||||    
T  10924281 ttgagtggtttgaataattaaaaagtatgaagtaatatattttattgattggggtcaatttataccactcatatg 10924355  T

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Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 304 - 364
Target Start/End: Complemental strand, 35205302 - 35205242
Alignment:
Q  304 agtgggacccattttagagttttggatgagtggcatggatatttgaaaaatgtagttgagt 364  Q
    ||||||| ||||||||||||||| |  |||||| ||||||||||  |||||||| ||||||    
T  35205302 agtgggagccattttagagttttaggggagtggtatggatatttagaaaatgtaattgagt 35205242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 304 - 364
Target Start/End: Original strand, 35211849 - 35211909
Alignment:
Q  304 agtgggacccattttagagttttggatgagtggcatggatatttgaaaaatgtagttgagt 364  Q
    ||||||| ||||||||||||||| |  |||||| ||||||||||  |||||||| ||||||    
T  35211849 agtgggagccattttagagttttaggggagtggtatggatatttagaaaatgtaattgagt 35211909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 81; Significance: 6e-38; HSPs: 23)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 298 - 402
Target Start/End: Original strand, 8322139 - 8322243
Alignment:
Q  298 gaatttagtgggacccattttagagttttggatgagtggcatggatatttgaaaaatgtagttgagtggtttaaataattgagaagtgtgaagtaatata 397  Q
    ||||||||||||||  ||||||||||||||||||||||| ||| |||||||||||||||| ||||||||||||||||||||| |||||||||||||||||    
T  8322139 gaatttagtgggacttattttagagttttggatgagtggtatgaatatttgaaaaatgtaattgagtggtttaaataattgaaaagtgtgaagtaatata 8322238  T
Q  398 atata 402  Q
    |||||    
T  8322239 atata 8322243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 302 - 427
Target Start/End: Original strand, 40095762 - 40095887
Alignment:
Q  302 ttagtgggacccattttagagttttggatgagtggcatggatatttgaaaaatgtagttgagtggtttaaataattgagaagtgtgaagtaatataatat 401  Q
    ||||||||||| ||| |||| |||||| ||||||| ||| |||||| |||||||||||||||| ||||||||||||||||||||| ||||||||||||||    
T  40095762 ttagtgggaccaattctagaattttgggtgagtggtatgaatatttaaaaaatgtagttgagtagtttaaataattgagaagtgtaaagtaatataatat 40095861  T
Q  402 attaagtggggtccatttaaaccacc 427  Q
    ||||  ||||||||||||| ||||||    
T  40095862 attagatggggtccatttataccacc 40095887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 304 - 455
Target Start/End: Complemental strand, 6859116 - 6858965
Alignment:
Q  304 agtgggacccattttagagttttggatgagtggcatggatatttgaaaaatgtagttgagtggtttaaataattgagaagtgtgaagtaatataatatat 403  Q
    |||| |||| |||||| |||||| ||  ||||||||||||||||  ||||| ||||| ||||||||||||||||| |||||||||||||||||| | |||    
T  6859116 agtgagacctattttaaagtttttgaaaagtggcatggatatttagaaaatatagtttagtggtttaaataattgggaagtgtgaagtaatatattgtat 6859017  T
Q  404 taagtggggtccatttaaaccacccatatgggtggaatgaatgtggatgctc 455  Q
    || |||||  ||||||| ||||||||||||||||| ||| ||||||||||||    
T  6859016 tacgtgggacccatttataccacccatatgggtggtatggatgtggatgctc 6858965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 302 - 464
Target Start/End: Original strand, 32914430 - 32914592
Alignment:
Q  302 ttagtgggacccattttagagttttggatgagtggcatggatattt-gaaaaatgtagttgagtggtttaaataattgagaagtgtgaagtaatataata 400  Q
    ||||||||||| ||||||||||||| || |||||| |||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||| |    
T  32914430 ttagtgggacctattttagagtttttga-gagtggtatggatatttagaaaaatgtagttgagtggtttaaataattgaaaagtgtgaagtaatataaaa 32914528  T
Q  401 tattaagtggggtccatttaaaccacccatatgggtggaatgaatgtggatgctcttactgtct 464  Q
    |||||  ||||  ||||||| || || ||||||| ||  ||| |||||| |||||||| |||||    
T  32914529 tattatatgggacccatttatactactcatatggatgacatggatgtgggtgctcttagtgtct 32914592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 305 - 458
Target Start/End: Original strand, 37069875 - 37070029
Alignment:
Q  305 gtgggacccattttagagttttggatgagtggcatggatatttgaaaaa-tgtagttgagtggtttaaataattgagaagtgtgaagtaatataatatat 403  Q
    |||||||||| |||| | |||| ||||||| | |||||||||| ||||| ||||   |||||||||||||||||| ||||||| || ||||||| |||||    
T  37069875 gtgggacccactttaaaattttagatgagtagtatggatatttaaaaaaatgtaagagagtggtttaaataattgggaagtgtaaaataatatattatat 37069974  T
Q  404 taagtggggtccatttaaaccacccatatgggtggaatgaatgtggatgctctta 458  Q
    || |||||  ||||||| |||||||| |||||||| ||| |||||||||||||||    
T  37069975 tatgtgggacccatttataccacccaaatgggtggcatggatgtggatgctctta 37070029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 310 - 433
Target Start/End: Complemental strand, 9104689 - 9104566
Alignment:
Q  310 acccattttagagttttggatgagtggcatggatatttgaaaaatgtagttgagtggtttaaataattgagaagtgtgaagtaatataatatattaagtg 409  Q
    |||||||||| | |||| || |||||| || ||||||| |||||||||||||||||||||||||||||||||| |||||| |||||||| ||||||  ||    
T  9104689 acccattttaaaattttagaagagtggtatagatatttaaaaaatgtagttgagtggtttaaataattgagaattgtgaaataatataaaatattagatg 9104590  T
Q  410 gggtccatttaaaccacccatatg 433  Q
     |  ||||||| ||||||||||||    
T  9104589 agacccatttataccacccatatg 9104566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 300 - 458
Target Start/End: Original strand, 3739456 - 3739613
Alignment:
Q  300 atttagtgggacccattttagagttttggatgagtggcatggatatttgaaaaatgtagttgagtggtttaaataattgagaagtgtgaagtaatataat 399  Q
    |||| |||||| |||||||| | ||||||| ||||   ||||||||||  ||||||||||| |||||||||||||||    ||||||||  |||||||||    
T  3739456 attttgtgggatccattttaaaattttgga-gagtattatggatatttagaaaatgtagttaagtggtttaaataataagaaagtgtgagataatataat 3739554  T
Q  400 atattaagtggggtccatttaaaccacccatatgggtggaatgaatgtggatgctctta 458  Q
     |||| | |||| |||||||| |||| |||||||||||| ||| |||||||||||||||    
T  3739555 gtattcaatgggatccatttataccatccatatgggtggtatggatgtggatgctctta 3739613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 311 - 432
Target Start/End: Original strand, 14657492 - 14657612
Alignment:
Q  311 cccattttagagttttggatgagtggcatggatatttgaaaaatgtagttgagtggtttaaataattgagaagtgtgaagtaatataatatattaagtgg 410  Q
    |||||||||||||||||||  ||||  ||| ||||||  |||||||||||||||||||||||||||||  ||||||||| ||||||||| ||||| || |    
T  14657492 cccattttagagttttggagcagtgatatgaatatttagaaaatgtagttgagtggtttaaataattggaaagtgtgaaataatataatgtattatgt-g 14657590  T
Q  411 ggtccatttaaaccacccatat 432  Q
     | ||||||| |||||||||||    
T  14657591 tgaccatttataccacccatat 14657612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 304 - 456
Target Start/End: Complemental strand, 33386793 - 33386646
Alignment:
Q  304 agtgggacccattttagagttttggatgagtggcatggatatttgaaaaatgtagttgagtggtttaaataattgagaagtgtgaagtaatataatatat 403  Q
    ||||||||||||||||||||||| || |||||| ||| ||||||  |||||| | |||||||||||||||||||| ||| ||| |||     ||||||||    
T  33386793 agtgggacccattttagagttttagaggagtggtatgaatatttagaaaatgcaattgagtggtttaaataattgggaattgtaaag-----taatatat 33386699  T
Q  404 taagtggggtccatttaaaccacccatatgggtggaatgaatgtggatgctct 456  Q
    || |||||  ||||||| ||||| ||| ||||||| ||| |||||| ||||||    
T  33386698 tatgtgggtcccatttataccactcatttgggtggcatggatgtggttgctct 33386646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 305 - 453
Target Start/End: Original strand, 38609893 - 38610040
Alignment:
Q  305 gtgggacccattttagagttttggatgagtggcatggatatttgaaaaatgtagttgagtggtttaaataattgagaagtgtgaagtaatataatatatt 404  Q
    ||||||||||||||| ||||||||| |||| | ||||||||||  ||||| || ||||||||||||||||||    |||||| || ||||||||||||||    
T  38609893 gtgggacccattttaaagttttgga-gagtagtatggatatttagaaaatataattgagtggtttaaataataagaaagtgtaaaataatataatatatt 38609991  T
Q  405 aagtggggtccatttaaaccacccatatgggtggaatgaatgtggatgc 453  Q
     |||| | |||||||| |||| | |||| ||||| ||| ||||||||||    
T  38609992 cagtgagatccatttataccatcaatataggtggtatggatgtggatgc 38610040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 298 - 367
Target Start/End: Original strand, 7394951 - 7395020
Alignment:
Q  298 gaatttagtgggacccattttagagttttggatgagtggcatggatatttgaaaaatgtagttgagtggt 367  Q
    |||||| |||||||||||||||||||||||||||||| | ||||||||||||||||||||  ||||||||    
T  7394951 gaattttgtgggacccattttagagttttggatgagttgtatggatatttgaaaaatgtaaatgagtggt 7395020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 330 - 463
Target Start/End: Original strand, 18565739 - 18565872
Alignment:
Q  330 tgagtggcatggatatttgaaaaatgtagttgagtggtttaaataattgagaagtgtgaagtaatataatatattaagtggggtccatttaaaccaccca 429  Q
    ||||||| |||||||||| ||||||||||||||||  ||||||||||||||||||   |||||||||||| |||||  || |  ||||||| ||||| ||    
T  18565739 tgagtggtatggatatttaaaaaatgtagttgagtcatttaaataattgagaagtcgaaagtaatataatgtattatatgagacccatttataccactca 18565838  T
Q  430 tatgggtggaatgaatgtggatgctcttactgtc 463  Q
    ||||| ||  |||||| |||||| ||||| ||||    
T  18565839 tatggatgacatgaatatggatgttcttagtgtc 18565872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 304 - 405
Target Start/End: Original strand, 39375681 - 39375782
Alignment:
Q  304 agtgggacccattttagagttttggatgagtggcatggatatttgaaaaatgtagttgagtggtttaaataattgagaagtgtgaagtaatataatatat 403  Q
    |||||||||  ||||| | ||||||| || ||| |||||||||| |||||| |||||||||||||||||||||||  || | ||||||||||||||||||    
T  39375681 agtgggacctgttttaaaattttggaggaatggtatggatatttaaaaaatatagttgagtggtttaaataattggaaaatatgaagtaatataatatat 39375780  T
Q  404 ta 405  Q
    ||    
T  39375781 ta 39375782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 362 - 456
Target Start/End: Original strand, 7395456 - 7395550
Alignment:
Q  362 agtggtttaaataattgagaagtgtgaagtaatataatatattaagtggggtccatttaaaccacccatatgggtggaatgaatgtggatgctct 456  Q
    |||||||||||||||||| |||||||||||||||||| |||||| |||||  ||||||| || ||||||||| |||| ||| || ||| ||||||    
T  7395456 agtggtttaaataattgaaaagtgtgaagtaatataaaatattaggtgggacccatttatactacccatatgagtggcatggatatgggtgctct 7395550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 336 - 432
Target Start/End: Original strand, 4897246 - 4897342
Alignment:
Q  336 gcatggatatttgaaaaatgtagttgagtggtttaaataattgagaagtgtgaagtaatataatatattaagtggggtccatttaaaccacccatat 432  Q
    ||||| ||||||  ||||||||||||||| |||||||||||||| || ||||||||||| ||||||||||  || | |||||||| |||||| ||||    
T  4897246 gcatgaatatttagaaaatgtagttgagtagtttaaataattgaaaaatgtgaagtaatgtaatatattatatgtgatccatttataccacctatat 4897342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 336 - 432
Target Start/End: Original strand, 4944640 - 4944736
Alignment:
Q  336 gcatggatatttgaaaaatgtagttgagtggtttaaataattgagaagtgtgaagtaatataatatattaagtggggtccatttaaaccacccatat 432  Q
    ||||| ||||||  ||||||||||||||| |||||||||||||| || ||||||||||| ||||||||||  || | |||||||| |||||| ||||    
T  4944640 gcatgaatatttagaaaatgtagttgagtagtttaaataattgaaaaatgtgaagtaatgtaatatattatatgtgatccatttataccacctatat 4944736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 299 - 431
Target Start/End: Complemental strand, 5147232 - 5147101
Alignment:
Q  299 aatttagtgggacccattttagagttttggatgagtggcatggatatttgaaaaatgtagttgagtggtttaaataattgagaagtgtgaagtaatataa 398  Q
    ||||| ||||||||| ||||| ||||||||| |||| | ||| ||||||  ||||||||||||| || |||||||||| | |||||||||  ||||||||    
T  5147232 aattttgtgggacccgttttaaagttttgga-gagtagtatgaatatttagaaaatgtagttgaatgatttaaataatagggaagtgtgagataatataa 5147134  T
Q  399 tatattaagtggggtccatttaaaccacccata 431  Q
    |||||| |||||   ||||| | ||||||||||    
T  5147133 tatattcagtggaacccattcataccacccata 5147101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 302 - 406
Target Start/End: Complemental strand, 29985010 - 29984906
Alignment:
Q  302 ttagtgggacccattttagagttttggatgagtggcatggatatttgaaaaatgtagttgagtggtttaaataattgagaagtgtgaagtaatataatat 401  Q
    ||||||||||  ||||||||||| ||||||||||  ||||||||   |||||| ||||||||| |||||||||||| |||||| | || ||||||||||     
T  29985010 ttagtgggacatattttagagttatggatgagtgatatggatatacaaaaaatttagttgagttgtttaaataattaagaagtataaaataatataataa 29984911  T
Q  402 attaa 406  Q
    |||||    
T  29984910 attaa 29984906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 367 - 456
Target Start/End: Original strand, 29794379 - 29794468
Alignment:
Q  367 tttaaataattgagaagtgtgaagtaatataatatattaagtggggtccatttaaaccacccatatgggtggaatgaatgtggatgctct 456  Q
    |||||||||| || ||||||||| ||||||||||||||| |||| ||||||||| |||||| | ||| |||| ||| || ||||||||||    
T  29794379 tttaaataatcgaaaagtgtgaaataatataatatattaggtggagtccatttataccaccaaaatgtgtggtatggatatggatgctct 29794468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 343 - 456
Target Start/End: Original strand, 43490502 - 43490616
Alignment:
Q  343 tatttgaaaaatgtagttgagtggtttaaataattgagaagtgtgaagtaatata-atatattaagtggggtccatttaaaccacccatatgggtggaat 441  Q
    ||||| ||||||||| |||| || ||||||||||| | || |||||| ||||||  |||||||| ||||||| |||||| |||| | || || |||| ||    
T  43490502 tatttaaaaaatgtatttgaatgatttaaataattaaaaaatgtgaaataatatttatatattatgtggggttcatttataccatcaatgtgcgtggtat 43490601  T
Q  442 gaatgtggatgctct 456  Q
    |||||||||||||||    
T  43490602 gaatgtggatgctct 43490616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 300 - 377
Target Start/End: Complemental strand, 3384808 - 3384731
Alignment:
Q  300 atttagtgggacccattttagagttttggatgagtggcatggatatttgaaaaatgtagttgagtggtttaaataatt 377  Q
    |||||||||||||||||||| | |||| ||||||||  ||| ||||||  ||||||||||||| | ||||||||||||    
T  3384808 atttagtgggacccattttaaattttttgatgagtgatatgaatatttataaaatgtagttgaattgtttaaataatt 3384731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 301 - 360
Target Start/End: Complemental strand, 13250566 - 13250507
Alignment:
Q  301 tttagtgggacccattttagagttttggatgagtggcatggatatttgaaaaatgtagtt 360  Q
    |||| |||||| |||||||||||||| ||||||||| ||| ||||||  |||||||||||    
T  13250566 tttaatgggactcattttagagttttagatgagtggtatgaatatttataaaatgtagtt 13250507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 382 - 458
Target Start/End: Complemental strand, 37258201 - 37258125
Alignment:
Q  382 agtgtgaagtaatataatatattaagtggggtccatttaaaccacccatatgggtggaatgaatgtggatgctctta 458  Q
    |||||||| |||||||||||||||  || |  ||||||| |||| ||||||| |||  ||| |||||||||||||||    
T  37258201 agtgtgaaataatataatatattatatgagacccatttataccatccatatgagtgacatggatgtggatgctctta 37258125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 80; Significance: 3e-37; HSPs: 13)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 304 - 455
Target Start/End: Original strand, 40278938 - 40279089
Alignment:
Q  304 agtgggacccattttagagttttggatgagtggcatggatatttgaaaaatgtagttgagtggtttaaataattgagaagtgtgaagtaatataatatat 403  Q
    ||||||||||||||||||||||| |  |||||| ||||||||||  |||||||||||||||||||||||||||||  |||| | ||||||||||||||||    
T  40278938 agtgggacccattttagagttttagtggagtggtatggatatttagaaaatgtagttgagtggtttaaataattggaaagtataaagtaatataatatat 40279037  T
Q  404 taagtggggtccatttaaaccacccatatgggtggaatgaatgtggatgctc 455  Q
    || |||||  ||||||| ||||| ||| ||||||| |||||||||| |||||    
T  40279038 tatgtgggtcccatttataccactcatttgggtggcatgaatgtgggtgctc 40279089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 302 - 456
Target Start/End: Original strand, 18226971 - 18227125
Alignment:
Q  302 ttagtgggacccattttagagttttggatgagtggcatggatatttgaaaaatgtagttgagtggtttaaataattgagaagtgtgaagtaatataatat 401  Q
    ||||||||| ||||||||||||||   ||| |||| |||||||||| |||||||||||||  ||||||||||||||| ||||||||| |||||||||| |    
T  18226971 ttagtgggatccattttagagtttataatgggtggtatggatatttaaaaaatgtagttggatggtttaaataattgggaagtgtgaggtaatataatgt 18227070  T
Q  402 attaagtggggtccatttaaaccacccatatgggtggaatgaatgtggatgctct 456  Q
    |||| |||||  || |||| |||||||| |||||||| ||| |||||||||||||    
T  18227071 attatgtgggacccgtttataccacccaaatgggtggcatggatgtggatgctct 18227125  T

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Target: chr8; HSP #3
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 302 - 456
Target Start/End: Complemental strand, 35158999 - 35158845
Alignment:
Q  302 ttagtgggacccattttagagttttggatgagtggcatggatatttgaaaaatgtagttgagtggtttaaataattgagaagtgtgaagtaatataatat 401  Q
    ||||||||||| ||||||||||||  ||  | ||| ||| ||||||  ||||||||||||||||||||||||||||| |||||||  |||||||||||||    
T  35158999 ttagtgggacctattttagagtttacgaaaaatggtatgaatatttagaaaatgtagttgagtggtttaaataattgggaagtgtccagtaatataatat 35158900  T
Q  402 attaagtggggtccatttaaaccacccatatgggtggaatgaatgtggatgctct 456  Q
    |||||||  |   |||||| |||||||||||| |||  ||| |||||||||||||    
T  35158899 attaagtcagactcatttataccacccatatgagtgatatggatgtggatgctct 35158845  T

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Target: chr8; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 298 - 395
Target Start/End: Original strand, 5191314 - 5191411
Alignment:
Q  298 gaatttagtgggacccattttagagttttggatgagtggcatggatatttgaaaaatgtagttgagtggtttaaataattgagaagtgtgaagtaata 395  Q
    ||||||||||||| |||||||||| |||||||||||||  ||| |||||||||||||||| |||||| |||||| ||||||| |||||||||||||||    
T  5191314 gaatttagtgggatccattttagaattttggatgagtgatatgaatatttgaaaaatgtaattgagtagtttaagtaattgaaaagtgtgaagtaata 5191411  T

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Target: chr8; HSP #5
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 304 - 456
Target Start/End: Original strand, 1156246 - 1156398
Alignment:
Q  304 agtgggacccattttagagttttggatgagtggcatggatatttgaaaaatgtagttgagtggtttaaataattgagaagtgtgaagtaatataatatat 403  Q
    |||| |||| |||||| | ||||||| |||||| ||||||||||  || || ||||| ||||||||||||||||| |||||||||| ||||||| | |||    
T  1156246 agtgagacctattttaaaattttggaagagtggtatggatatttagaagatatagtttagtggtttaaataattgggaagtgtgaaataatatattgtat 1156345  T
Q  404 taagtggggtccatttaaaccacccatatgggtggaatgaatgtggatgctct 456  Q
    || ||| |  ||||||| ||||| ||||||||||| ||| |||||||||||||    
T  1156346 tacgtgagacccatttataccactcatatgggtggtatggatgtggatgctct 1156398  T

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Target: chr8; HSP #6
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 308 - 454
Target Start/End: Complemental strand, 11425606 - 11425461
Alignment:
Q  308 ggacccattttagagttttggatgagtggcatggatatttgaaaaatgtagttgagtggtttaaataattgagaagtgtgaagtaatataatatattaag 407  Q
    ||||||||||||||||||| || |||||  ||| ||||||  ||||||||||||||| | ||||||||||| ||||||| |||||||||||||||||| |    
T  11425606 ggacccattttagagttttagaggagtgt-atgaatatttagaaaatgtagttgagtcggttaaataattgggaagtgtaaagtaatataatatattatg 11425508  T
Q  408 tggggtccatttaaaccacccatatgggtggaatgaatgtggatgct 454  Q
    |||   ||||||| |||| |||| ||||||| ||| |||||| ||||    
T  11425507 tggatcccatttataccatccatttgggtggcatggatgtggttgct 11425461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 316 - 456
Target Start/End: Original strand, 37479177 - 37479317
Alignment:
Q  316 tttagagttttggatgagtggcatggatatttgaaaa-atgtagttgagtggtttaaataattgagaagtgtgaagtaatataatatattaagtggggtc 414  Q
    ||||||||||| ||||||| | |||||||||| |||| ||||||||||||||||||||||||||| |||| | |||||||||||||||||| || || |     
T  37479177 tttagagttttagatgagtagtatggatatttaaaaaaatgtagttgagtggtttaaataattgaaaagtttaaagtaatataatatattatgt-ggatt 37479275  T
Q  415 catttaaaccacccatatgggtggaatgaatgtggatgctct 456  Q
    |||||| |||| ||||||  |||| ||| |||||| ||||||    
T  37479276 catttataccatccatataagtggcatggatgtggttgctct 37479317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 302 - 398
Target Start/End: Original strand, 9682332 - 9682427
Alignment:
Q  302 ttagtgggacccattttagagttttggatgagtggcatggatatttgaaaaatgtagttgagtggtttaaataattgagaagtgtgaagtaatataa 398  Q
    ||||||||||||||| || ||||||| | || ||| |||||| |||  |||||||||||||||||||||||||||||| ||||||||||||||||||    
T  9682332 ttagtgggacccattata-agttttgtaagaatggtatggatgtttagaaaatgtagttgagtggtttaaataattgaaaagtgtgaagtaatataa 9682427  T

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Target: chr8; HSP #9
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 302 - 398
Target Start/End: Original strand, 17312824 - 17312919
Alignment:
Q  302 ttagtgggacccattttagagttttggatgagtggcatggatatttgaaaaatgtagttgagtggtttaaataattgagaagtgtgaagtaatataa 398  Q
    ||||||||||||||| || | ||||| | || ||| ||||||||||  || ||||||||||||||||||||||||||| ||||||||||||||||||    
T  17312824 ttagtgggacccattataaa-ttttgtaagaatggtatggatatttagaagatgtagttgagtggtttaaataattgaaaagtgtgaagtaatataa 17312919  T

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Target: chr8; HSP #10
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 302 - 398
Target Start/End: Original strand, 27594239 - 27594334
Alignment:
Q  302 ttagtgggacccattttagagttttggatgagtggcatggatatttgaaaaatgtagttgagtggtttaaataattgagaagtgtgaagtaatataa 398  Q
    ||||||||| ||||| || ||||||| | |||||| ||| ||||||  |||||||||||||||||||||||||||||  | ||||||| ||||||||    
T  27594239 ttagtgggatccattgta-agttttgtaagagtggtatgaatatttagaaaatgtagttgagtggtttaaataattggaaggtgtgaaataatataa 27594334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 306 - 456
Target Start/End: Complemental strand, 45251579 - 45251430
Alignment:
Q  306 tgggacccattttagagttttggatgagtggcatggatatttgaaaaatgtagttgagtggtttaaataattgagaagtgtgaagtaatataatatatta 405  Q
    ||||||| ||||||||||||| || |||| | |||||||||| ||||||||| || ||||||||||||||| || || |||||| ||| ||||| || |     
T  45251579 tgggaccgattttagagttttaga-gagtagtatggatatttaaaaaatgtatttaagtggtttaaataatagaaaaatgtgaaataacataatttagtc 45251481  T
Q  406 agtggggtccatttaaaccacccatatgggtggaatgaatgtggatgctct 456  Q
    | ||||  ||  ||| ||||| ||||||||  | ||| |||||||||||||    
T  45251480 aatgggacccgcttataccactcatatgggcagcatggatgtggatgctct 45251430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 304 - 425
Target Start/End: Complemental strand, 30235067 - 30234946
Alignment:
Q  304 agtgggacccattttagagttttggatgagtggcatggatatttgaaaaatgtagttgagtggtttaaataattgagaagtgtgaagtaatataatatat 403  Q
    ||||||||| ||||||||||||| |||| || | ||  |||||| ||||||  |||||||| ||||||||| ||| ||| ||| || ||||||||  |||    
T  30235067 agtgggacctattttagagtttttgatgggttgtataaatatttaaaaaatacagttgagttgtttaaatatttgggaaatgtaaaataatataaagtat 30234968  T
Q  404 taagtggggtccatttaaacca 425  Q
    |||||||  | |||||||||||    
T  30234967 taagtggaattcatttaaacca 30234946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 342 - 377
Target Start/End: Complemental strand, 34954380 - 34954345
Alignment:
Q  342 atatttgaaaaatgtagttgagtggtttaaataatt 377  Q
    |||||| |||||||||||||||||||||||||||||    
T  34954380 atatttaaaaaatgtagttgagtggtttaaataatt 34954345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 65; Significance: 2e-28; HSPs: 2)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 305 - 456
Target Start/End: Complemental strand, 13925 - 13773
Alignment:
Q  305 gtgggacccattttagagttttggatgagtggcatggatatttgaaaaa-tgtagttgagtggtttaaataattgagaagtgtgaagtaatataatatat 403  Q
    |||||||||| |||| |||||| ||||||| | |||||||||| ||||| ||||   |||||||||||||||||| ||||||| || ||||||| |||||    
T  13925 gtgggacccactttaaagttttagatgagtagtatggatatttaaaaaaatgtaagagagtggtttaaataattgggaagtgtaaaataatatattatat 13826  T
Q  404 taagtggggtccatttaaaccacccatatgggtggaatgaatgtggatgctct 456  Q
    || |||||  ||||||| |||||||| |||||||| ||| |||||||||||||    
T  13825 tatgtgggacccatttataccacccaaatgggtggcatggatgtggatgctct 13773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 305 - 456
Target Start/End: Complemental strand, 21662 - 21510
Alignment:
Q  305 gtgggacccattttagagttttggatgagtggcatggatatttgaaaaa-tgtagttgagtggtttaaataattgagaagtgtgaagtaatataatatat 403  Q
    |||||||||| |||| |||||| ||||||| | |||||||||| ||||| ||||   |||||||||||||||||| ||||||| || ||||||| |||||    
T  21662 gtgggacccactttaaagttttagatgagtagtatggatatttaaaaaaatgtaagagagtggtttaaataattgggaagtgtaaaataatatattatat 21563  T
Q  404 taagtggggtccatttaaaccacccatatgggtggaatgaatgtggatgctct 456  Q
    || |||||  ||||||| |||||||| |||||||| ||| |||||||||||||    
T  21562 tatgtgggacccatttataccacccaaatgggtggcatggatgtggatgctct 21510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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