View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3193_high_3 (Length: 799)

Name: NF3193_high_3
Description: NF3193
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3193_high_3
NF3193_high_3
[»] scaffold0419 (2 HSPs)
scaffold0419 (541-686)||(3032-3179)
scaffold0419 (719-760)||(2969-3011)
[»] chr1 (39 HSPs)
chr1 (541-686)||(48471935-48472082)
chr1 (541-686)||(4059594-4059741)
chr1 (541-686)||(19077997-19078144)
chr1 (541-686)||(19125887-19126034)
chr1 (541-686)||(24196346-24196493)
chr1 (47-113)||(3825007-3825073)
chr1 (541-685)||(27092924-27093070)
chr1 (541-686)||(3616884-3617031)
chr1 (568-686)||(24962038-24962157)
chr1 (541-686)||(43706726-43706872)
chr1 (541-686)||(46432288-46432435)
chr1 (570-687)||(26605379-26605495)
chr1 (530-686)||(24749883-24750041)
chr1 (552-686)||(4455125-4455262)
chr1 (548-691)||(47685181-47685326)
chr1 (536-686)||(29182067-29182219)
chr1 (541-686)||(29676164-29676311)
chr1 (541-686)||(28920728-28920870)
chr1 (541-686)||(16551715-16551863)
chr1 (541-686)||(2425309-2425456)
chr1 (551-617)||(9554283-9554350)
chr1 (549-686)||(51719202-51719340)
chr1 (719-760)||(4059530-4059572)
chr1 (719-768)||(24196515-24196565)
chr1 (719-760)||(48471871-48471913)
chr1 (719-763)||(43706659-43706704)
chr1 (568-616)||(16858487-16858535)
chr1 (719-768)||(2425477-2425527)
chr1 (719-768)||(3616799-3616849)
chr1 (719-768)||(24196261-24196311)
chr1 (719-768)||(24750023-24750073)
chr1 (719-768)||(27092853-27092903)
chr1 (719-768)||(28920905-28920955)
chr1 (719-760)||(46432224-46432266)
chr1 (719-768)||(51719123-51719173)
chr1 (711-763)||(4455047-4455100)
chr1 (720-760)||(28552313-28552354)
chr1 (552-660)||(31084695-31084804)
chr1 (719-768)||(50334818-50334867)
[»] chr8 (31 HSPs)
chr8 (541-686)||(19391459-19391606)
chr8 (541-686)||(5192343-5192490)
chr8 (541-686)||(12723333-12723480)
chr8 (541-691)||(1824685-1824836)
chr8 (541-691)||(1859130-1859281)
chr8 (560-686)||(4518958-4519086)
chr8 (541-683)||(22452245-22452389)
chr8 (541-686)||(8802472-8802618)
chr8 (541-686)||(38630140-38630287)
chr8 (541-690)||(21666346-21666497)
chr8 (541-686)||(30784337-30784483)
chr8 (543-691)||(18252960-18253110)
chr8 (543-686)||(17648328-17648473)
chr8 (541-686)||(33895459-33895605)
chr8 (541-691)||(7117186-7117339)
chr8 (568-686)||(4807700-4807819)
chr8 (568-686)||(19924350-19924469)
chr8 (541-626)||(23565235-23565321)
chr8 (720-768)||(19391388-19391436)
chr8 (551-686)||(3208065-3208202)
chr8 (541-690)||(31268360-31268511)
chr8 (549-686)||(32400402-32400541)
chr8 (557-686)||(44147056-44147186)
chr8 (719-768)||(4807600-4807650)
chr8 (543-615)||(17813010-17813083)
chr8 (719-768)||(5192272-5192322)
chr8 (541-626)||(18881575-18881661)
chr8 (719-768)||(19392820-19392870)
chr8 (711-768)||(30784510-30784568)
chr8 (719-760)||(44147224-44147266)
chr8 (719-763)||(12723515-12723560)
[»] chr5 (36 HSPs)
chr5 (541-686)||(16901069-16901216)
chr5 (541-686)||(25556947-25557094)
chr5 (541-686)||(18695088-18695235)
chr5 (536-687)||(17825564-17825717)
chr5 (541-686)||(245679-245826)
chr5 (541-686)||(26639109-26639256)
chr5 (568-686)||(23765492-23765609)
chr5 (568-686)||(23815340-23815457)
chr5 (549-686)||(10379367-10379505)
chr5 (541-685)||(40428711-40428857)
chr5 (536-691)||(41663590-41663748)
chr5 (543-686)||(10293161-10293306)
chr5 (541-686)||(31055386-31055533)
chr5 (572-691)||(7187269-7187388)
chr5 (551-686)||(7835795-7835931)
chr5 (541-686)||(36641228-36641375)
chr5 (552-689)||(17704670-17704808)
chr5 (541-686)||(16307548-16307696)
chr5 (549-686)||(38408714-38408852)
chr5 (541-683)||(38476542-38476686)
chr5 (719-768)||(31648238-31648288)
chr5 (719-768)||(25556877-25556926)
chr5 (541-675)||(2373241-2373377)
chr5 (721-768)||(16900997-16901045)
chr5 (543-687)||(462850-462996)
chr5 (719-768)||(23765420-23765470)
chr5 (719-768)||(23815268-23815318)
chr5 (551-686)||(15885247-15885383)
chr5 (720-760)||(40428647-40428688)
chr5 (639-687)||(20653904-20653952)
chr5 (711-768)||(7835954-7836012)
chr5 (719-760)||(8646003-8646045)
chr5 (719-760)||(18695256-18695298)
chr5 (719-768)||(20654048-20654098)
chr5 (719-768)||(31055315-31055365)
chr5 (720-768)||(31576493-31576542)
[»] chr4 (38 HSPs)
chr4 (541-686)||(43793703-43793850)
chr4 (543-686)||(15058892-15059037)
chr4 (541-686)||(13397747-13397894)
chr4 (541-686)||(13826491-13826638)
chr4 (541-691)||(35475369-35475521)
chr4 (541-686)||(27018299-27018446)
chr4 (568-681)||(2715817-2715930)
chr4 (590-686)||(1588535-1588631)
chr4 (541-686)||(5304419-5304566)
chr4 (568-675)||(52838324-52838431)
chr4 (541-686)||(25011820-25011967)
chr4 (600-686)||(9195796-9195882)
chr4 (551-675)||(15795413-15795539)
chr4 (569-680)||(41034727-41034839)
chr4 (552-687)||(51291252-51291390)
chr4 (600-686)||(55780472-55780558)
chr4 (600-686)||(55844652-55844738)
chr4 (568-683)||(4357340-4357456)
chr4 (541-686)||(19232415-19232563)
chr4 (541-686)||(6789030-6789177)
chr4 (548-686)||(4098741-4098882)
chr4 (541-617)||(36729160-36729237)
chr4 (541-686)||(41877100-41877245)
chr4 (600-686)||(4433315-4433402)
chr4 (719-768)||(4433183-4433233)
chr4 (719-768)||(43793631-43793681)
chr4 (719-768)||(4433436-4433485)
chr4 (543-689)||(9397273-9397421)
chr4 (720-768)||(20919335-20919384)
chr4 (718-768)||(41877277-41877328)
chr4 (541-626)||(14804465-14804551)
chr4 (719-749)||(15058840-15058870)
chr4 (719-768)||(25011735-25011785)
chr4 (719-768)||(25011988-25012038)
chr4 (549-626)||(25618708-25618785)
chr4 (719-760)||(6979314-6979355)
chr4 (721-763)||(27018470-27018514)
chr4 (720-768)||(35475543-35475592)
[»] chr3 (58 HSPs)
chr3 (541-686)||(26628097-26628244)
chr3 (543-691)||(26633433-26633582)
chr3 (541-686)||(8339012-8339159)
chr3 (541-686)||(28154954-28155101)
chr3 (541-686)||(48907364-48907511)
chr3 (552-691)||(3780959-3781099)
chr3 (541-686)||(10743493-10743639)
chr3 (541-684)||(3328885-3329030)
chr3 (541-683)||(13080982-13081126)
chr3 (541-686)||(4522039-4522186)
chr3 (557-686)||(8542695-8542826)
chr3 (541-686)||(23428691-23428838)
chr3 (541-686)||(25022735-25022882)
chr3 (541-686)||(30155217-30155364)
chr3 (548-686)||(25179663-25179801)
chr3 (552-691)||(26177039-26177180)
chr3 (548-686)||(22500674-22500814)
chr3 (553-691)||(26126990-26127130)
chr3 (536-689)||(23320443-23320597)
chr3 (541-686)||(27852824-27852970)
chr3 (541-686)||(28173801-28173948)
chr3 (539-691)||(40836248-40836403)
chr3 (527-626)||(20626780-20626880)
chr3 (541-626)||(32960715-32960800)
chr3 (541-684)||(34878601-34878746)
chr3 (541-686)||(46673119-46673266)
chr3 (548-646)||(6927596-6927695)
chr3 (560-626)||(43668574-43668641)
chr3 (541-626)||(22416480-22416566)
chr3 (719-768)||(20001962-20002011)
chr3 (541-672)||(31039049-31039182)
chr3 (552-627)||(3821027-3821103)
chr3 (591-686)||(48860787-48860883)
chr3 (721-768)||(26633361-26633408)
chr3 (541-685)||(33279657-33279803)
chr3 (719-768)||(22447740-22447790)
chr3 (568-686)||(22447840-22447963)
chr3 (719-768)||(34878529-34878579)
chr3 (721-760)||(8338948-8338988)
chr3 (718-768)||(13080894-13080945)
chr3 (541-686)||(20001794-20001941)
chr3 (719-768)||(3328813-3328863)
chr3 (719-768)||(3329067-3329117)
chr3 (719-756)||(13081148-13081186)
chr3 (719-768)||(22500596-22500646)
chr3 (719-760)||(25179829-25179871)
chr3 (711-768)||(25336358-25336416)
chr3 (719-768)||(26628025-26628075)
chr3 (719-768)||(28154882-28154932)
chr3 (719-760)||(28173737-28173779)
chr3 (719-768)||(32960645-32960695)
chr3 (719-768)||(36311152-36311202)
chr3 (719-768)||(48907545-48907595)
chr3 (720-768)||(1743504-1743553)
chr3 (550-586)||(32315105-32315142)
chr3 (637-690)||(33105022-33105075)
chr3 (541-617)||(36311306-36311383)
chr3 (722-763)||(49657770-49657811)
[»] chr2 (27 HSPs)
chr2 (541-686)||(38716278-38716425)
chr2 (541-686)||(30714346-30714493)
chr2 (549-686)||(11175992-11176131)
chr2 (541-686)||(15735149-15735296)
chr2 (541-686)||(2986771-2986918)
chr2 (541-686)||(9051100-9051246)
chr2 (541-686)||(9787644-9787791)
chr2 (543-687)||(22387141-22387288)
chr2 (541-686)||(25298873-25299020)
chr2 (541-686)||(15700832-15700979)
chr2 (557-686)||(6763805-6763936)
chr2 (541-686)||(18537900-18538047)
chr2 (541-673)||(17368314-17368448)
chr2 (541-686)||(22191131-22191277)
chr2 (600-686)||(4587946-4588033)
chr2 (541-626)||(4104896-4104982)
chr2 (541-683)||(28365598-28365742)
chr2 (721-763)||(36464527-36464570)
chr2 (600-688)||(331795-331885)
chr2 (719-768)||(11175907-11175957)
chr2 (719-768)||(18538082-18538132)
chr2 (719-760)||(25298809-25298851)
chr2 (719-760)||(30714283-30714325)
chr2 (548-617)||(12350164-12350236)
chr2 (720-768)||(15735064-15735113)
chr2 (720-768)||(18537829-18537878)
chr2 (720-761)||(28365765-28365806)
[»] scaffold0025 (2 HSPs)
scaffold0025 (541-686)||(19368-19514)
scaffold0025 (541-686)||(61899-62048)
[»] chr7 (56 HSPs)
chr7 (541-686)||(19195285-19195432)
chr7 (541-686)||(21224424-21224571)
chr7 (541-686)||(48176035-48176181)
chr7 (557-686)||(24597603-24597734)
chr7 (541-686)||(36746575-36746722)
chr7 (541-686)||(13577858-13578004)
chr7 (543-686)||(2331098-2331243)
chr7 (557-686)||(27869283-27869414)
chr7 (541-686)||(31493995-31494142)
chr7 (540-687)||(44077941-44078091)
chr7 (543-694)||(14624680-14624832)
chr7 (549-686)||(17305849-17305989)
chr7 (568-686)||(3562533-3562652)
chr7 (557-686)||(20636704-20636835)
chr7 (568-686)||(35337622-35337741)
chr7 (541-686)||(42271417-42271564)
chr7 (548-617)||(6650665-6650735)
chr7 (541-686)||(11843250-11843396)
chr7 (536-617)||(15681785-15681867)
chr7 (541-684)||(4193637-4193782)
chr7 (541-687)||(26385345-26385493)
chr7 (541-686)||(41452321-41452468)
chr7 (541-626)||(5087142-5087228)
chr7 (527-689)||(3769486-3769650)
chr7 (530-686)||(21225610-21225766)
chr7 (541-691)||(39182015-39182166)
chr7 (557-686)||(8526881-8527011)
chr7 (541-686)||(10655415-10655561)
chr7 (541-691)||(24464655-24464808)
chr7 (541-686)||(10023857-10024003)
chr7 (600-686)||(18754398-18754485)
chr7 (557-690)||(19919691-19919825)
chr7 (600-686)||(20638576-20638663)
chr7 (536-617)||(3403118-3403200)
chr7 (718-768)||(11843178-11843229)
chr7 (719-760)||(3562441-3562483)
chr7 (722-768)||(10655586-10655632)
chr7 (541-617)||(7365378-7365455)
chr7 (719-768)||(36746757-36746806)
chr7 (541-616)||(5348184-5348260)
chr7 (541-691)||(19493399-19493550)
chr7 (721-760)||(20636874-20636914)
chr7 (720-768)||(21224354-21224402)
chr7 (721-760)||(27869204-27869244)
chr7 (599-689)||(26126336-26126427)
chr7 (719-760)||(8527048-8527090)
chr7 (548-617)||(9822179-9822248)
chr7 (548-617)||(10724104-10724173)
chr7 (719-768)||(15681884-15681934)
chr7 (719-760)||(24597525-24597567)
chr7 (719-768)||(31494164-31494214)
chr7 (657-691)||(33237604-33237638)
chr7 (570-616)||(46267348-46267394)
chr7 (720-768)||(2331273-2331322)
chr7 (719-763)||(13577792-13577837)
chr7 (650-691)||(25002787-25002828)
[»] chr6 (34 HSPs)
chr6 (541-686)||(24051093-24051240)
chr6 (543-686)||(22269492-22269636)
chr6 (541-675)||(32451822-32451958)
chr6 (541-686)||(35102563-35102710)
chr6 (560-686)||(15298570-15298697)
chr6 (572-686)||(4597509-4597624)
chr6 (541-686)||(18791442-18791589)
chr6 (557-686)||(34834010-34834141)
chr6 (543-686)||(24603446-24603591)
chr6 (536-686)||(3118764-3118916)
chr6 (541-691)||(24615765-24615917)
chr6 (541-686)||(14572250-14572397)
chr6 (568-686)||(26710407-26710526)
chr6 (541-686)||(31210879-31211026)
chr6 (541-686)||(22968228-22968373)
chr6 (541-686)||(23820020-23820165)
chr6 (568-686)||(25819769-25819888)
chr6 (578-686)||(8412843-8412952)
chr6 (552-626)||(20863811-20863886)
chr6 (541-688)||(4370981-4371124)
chr6 (541-617)||(34528303-34528380)
chr6 (553-626)||(23124804-23124878)
chr6 (719-763)||(4013919-4013964)
chr6 (720-760)||(4597413-4597454)
chr6 (541-656)||(18749168-18749284)
chr6 (721-760)||(14194456-14194495)
chr6 (722-760)||(35102499-35102538)
chr6 (719-760)||(15298738-15298780)
chr6 (719-768)||(18749097-18749147)
chr6 (719-768)||(24051009-24051059)
chr6 (719-768)||(26710561-26710611)
chr6 (719-768)||(35102717-35102767)
chr6 (719-763)||(14572183-14572228)
chr6 (724-760)||(32682381-32682418)
[»] scaffold0607 (2 HSPs)
scaffold0607 (541-686)||(2121-2268)
scaffold0607 (719-768)||(2048-2098)
[»] scaffold0179 (2 HSPs)
scaffold0179 (557-686)||(5738-5868)
scaffold0179 (719-768)||(5650-5700)
[»] scaffold0001 (2 HSPs)
scaffold0001 (541-686)||(142019-142166)
scaffold0001 (711-768)||(141945-142003)
[»] scaffold0174 (1 HSPs)
scaffold0174 (530-691)||(29796-29959)
[»] scaffold0087 (1 HSPs)
scaffold0087 (541-686)||(25036-25183)
[»] scaffold0062 (2 HSPs)
scaffold0062 (541-686)||(49744-49891)
scaffold0062 (541-686)||(62283-62430)
[»] scaffold0267 (1 HSPs)
scaffold0267 (551-691)||(3650-3792)
[»] scaffold0291 (1 HSPs)
scaffold0291 (549-687)||(10005-10145)
[»] scaffold0406 (1 HSPs)
scaffold0406 (541-682)||(2080-2223)
[»] scaffold0150 (1 HSPs)
scaffold0150 (541-686)||(5916-6063)
[»] scaffold0024 (1 HSPs)
scaffold0024 (555-690)||(43910-44047)
[»] scaffold0002 (3 HSPs)
scaffold0002 (548-690)||(455107-455252)
scaffold0002 (657-690)||(455011-455044)
scaffold0002 (719-763)||(455282-455327)
[»] scaffold0060 (2 HSPs)
scaffold0060 (541-686)||(66259-66406)
scaffold0060 (719-768)||(66427-66477)
[»] scaffold1875 (1 HSPs)
scaffold1875 (541-626)||(828-914)
[»] scaffold1202 (1 HSPs)
scaffold1202 (600-686)||(1906-1993)
[»] scaffold0014 (1 HSPs)
scaffold0014 (552-617)||(112282-112348)
[»] scaffold0007 (1 HSPs)
scaffold0007 (568-646)||(250618-250696)
[»] scaffold0171 (1 HSPs)
scaffold0171 (536-626)||(9178-9270)
[»] scaffold0064 (1 HSPs)
scaffold0064 (568-626)||(54516-54573)
[»] scaffold0005 (1 HSPs)
scaffold0005 (541-626)||(35176-35262)


Alignment Details
Target: scaffold0419 (Bit Score: 72; Significance: 2e-32; HSPs: 2)
Name: scaffold0419
Description:

Target: scaffold0419; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 541 - 686
Target Start/End: Original strand, 3032 - 3179
Alignment:
Q  541 attttgtcccctttcgtcccaaaattg-tgagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttgtaaaaataaaagttcaaacaac 639  Q
    |||||| |||| ||| ||||||||||| |||||||||||||| |||| |||||||||| ||||||| ||||||||||||||| |||| || ||||| |||    
T  3032 attttggcccccttcatcccaaaattgatgagaagacgccacgtgtcccaaaaaagaggccataattgcaactttttgtaaagataagaggtcaaaaaac 3131  T
Q  640 atatttctcatatgttagg-ggttaaaagagcatattgccctaaacat 686  Q
    ||||||| | ||||||||| ||| ||||||||||||| ||||||||||    
T  3132 atatttcccttatgttaggaggtcaaaagagcatatttccctaaacat 3179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0419; HSP #2
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 719 - 760
Target Start/End: Complemental strand, 3011 - 2969
Alignment:
Q  719 gccaaaatcgcaacattttgaaacata-ggggcgaaaagtgca 760  Q
    ||||||||||||||||||||||||||| |||||||||||||||    
T  3011 gccaaaatcgcaacattttgaaacatagggggcgaaaagtgca 2969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 72; Significance: 2e-32; HSPs: 39)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 541 - 686
Target Start/End: Original strand, 48471935 - 48472082
Alignment:
Q  541 attttgtcccctttcgtcccaaaattg-tgagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttgtaaaaataaaagttcaaacaac 639  Q
    |||||| |||| ||| ||||||||||| |||||||||||||| |||| |||||||| ||||||||||||||||||||||||| ||||  | ||||| | |    
T  48471935 attttggcccccttcatcccaaaattgctgagaagacgccacgtgtcccaaaaaagggaccataatcgcaactttttgtaaagataaggggtcaaaaagc 48472034  T
Q  640 atatttctcatatgttagg-ggttaaaagagcatattgccctaaacat 686  Q
    ||||||||| ||||||||| ||| ||||||||||||| ||||||||||    
T  48472035 atatttctcttatgttaggaggtcaaaagagcatatttccctaaacat 48472082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 541 - 686
Target Start/End: Original strand, 4059594 - 4059741
Alignment:
Q  541 attttgtcccctttcgtcccaaaattg-tgagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttgtaaaaataaaagttcaaacaac 639  Q
    |||||| |||||||| ||||||||||| |||||||||||||| |||| |||||||  ||||||||||||||||||||||||| ||||  | ||||| |||    
T  4059594 attttggcccctttcatcccaaaattgctgagaagacgccacgtgtcccaaaaaatggaccataatcgcaactttttgtaaagataaggggtcaaaaaac 4059693  T
Q  640 atatttctcatatgttagg-ggttaaaagagcatattgccctaaacat 686  Q
    ||||||  | ||||||||| ||| ||||||||||||| ||||||||||    
T  4059694 atattttccttatgttaggaggtcaaaagagcatatttccctaaacat 4059741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 541 - 686
Target Start/End: Original strand, 19077997 - 19078144
Alignment:
Q  541 attttgtcccctttcgtcccaaaattg-tgagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttgtaaaaataaaagttcaaacaac 639  Q
    |||||| |||||||| ||| ||||||| |||||||||||||| |||| |||||||| |  |||||||||||||||||||||| ||||  | ||||| |||    
T  19077997 attttggcccctttcatccaaaaattgctgagaagacgccacgtgtcccaaaaaaggggtcataatcgcaactttttgtaaagataaggggtcaaaaaac 19078096  T
Q  640 atatttctcatatgttagg-ggttaaaagagcatattgccctaaacat 686  Q
    ||||||| | ||||||||| ||| ||||||||||||| ||||||||||    
T  19078097 atatttcccttatgttaggaggtcaaaagagcatatttccctaaacat 19078144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 541 - 686
Target Start/End: Original strand, 19125887 - 19126034
Alignment:
Q  541 attttgtcccctttcgtcccaaaattg-tgagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttgtaaaaataaaagttcaaacaac 639  Q
    |||||| |||||||| ||| ||||||| |||||||||||||| |||| |||||||| |  |||||||||||||||||||||| ||||  | ||||| |||    
T  19125887 attttggcccctttcatccaaaaattgctgagaagacgccacgtgtcccaaaaaaggggtcataatcgcaactttttgtaaagataaggggtcaaaaaac 19125986  T
Q  640 atatttctcatatgttagg-ggttaaaagagcatattgccctaaacat 686  Q
    ||||||| | ||||||||| ||| ||||||||||||| ||||||||||    
T  19125987 atatttcccttatgttaggaggtcaaaagagcatatttccctaaacat 19126034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 541 - 686
Target Start/End: Complemental strand, 24196493 - 24196346
Alignment:
Q  541 attttgtcccctttcgtcccaaaattg-tgagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttgtaaaaataaaagttcaaacaac 639  Q
    |||||| |||||||||||| ||||||| |||||||||||||| |||| |||||||| | ||||| ||||||||||||||||| ||||  | ||||| | |    
T  24196493 attttggcccctttcgtccaaaaattgctgagaagacgccacgtgtcccaaaaaaggggccatattcgcaactttttgtaaagataaggggtcaaaaagc 24196394  T
Q  640 atatttctcatatgttagg-ggttaaaagagcatattgccctaaacat 686  Q
    ||||||| | ||||||||| ||| ||||||||||||| | ||||||||    
T  24196393 atatttcccttatgttaggaggtcaaaagagcatatttctctaaacat 24196346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 47 - 113
Target Start/End: Complemental strand, 3825073 - 3825007
Alignment:
Q  47 tcctatggtcaatgacttatcttaatagaatcatagacaacacttattccatttttttacttcctta 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||    
T  3825073 tcctatggtcaatgacttatcttaatagaatcatagacaacacttattccttttttttccttcctta 3825007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 541 - 685
Target Start/End: Original strand, 27092924 - 27093070
Alignment:
Q  541 attttgtcccctttcgtcccaaaattg-tgagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttgtaaaaataaaagttcaaacaac 639  Q
    |||||| ||| |||| ||||||||||| |||||||||||||| |||  |||||||| | ||||||| ||||||||||||||| ||||  | ||||| |||    
T  27092924 attttggcccatttcatcccaaaattgctgagaagacgccacgtgttccaaaaaaggggccataattgcaactttttgtaaagataaggggtcaaaaaac 27093023  T
Q  640 atatttctcatatgtta-ggggttaaaagagcatattgccctaaaca 685  Q
    ||||||| ||||| ||| ||||| ||||||||||||| |||||||||    
T  27093024 atatttcacatatattagggggtcaaaagagcatatttccctaaaca 27093070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 541 - 686
Target Start/End: Complemental strand, 3617031 - 3616884
Alignment:
Q  541 attttgtcccctttcgtcccaaaattg-tgagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttgtaaaaataaaagttcaaacaac 639  Q
    |||||| |||||||  ||| ||||||| |||||||||||||| |||| |||||||| | ||||||||||||||||||||||| ||||  | ||||| |||    
T  3617031 attttggccccttttatccaaaaattgctgagaagacgccacgtgtcccaaaaaaggggccataatcgcaactttttgtaaagataaggggtcaaaaaac 3616932  T
Q  640 atatttctcatatgt-taggggttaaaagagcatattgccctaaacat 686  Q
    ||||||| | |||||  || ||| ||||||||||||| ||||||||||    
T  3616931 atatttcccttatgtgaagaggtcaaaagagcatatttccctaaacat 3616884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 568 - 686
Target Start/End: Complemental strand, 24962157 - 24962038
Alignment:
Q  568 tgagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttgtaaaaataaaagttcaaacaacatatttctcatatgttagg-ggttaaaa 666  Q
    |||||||||||||| |||| |||||||| | ||||||||||||||||||||||| ||||  | ||||| | |||||||| | ||||||||| ||| ||||    
T  24962157 tgagaagacgccacgtgtcccaaaaaaggggccataatcgcaactttttgtaaagataaggggtcaaaaagcatatttcccttatgttaggaggtcaaaa 24962058  T
Q  667 gagcatattgccctaaacat 686  Q
    ||||||||| ||||||||||    
T  24962057 gagcatatttccctaaacat 24962038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 541 - 686
Target Start/End: Original strand, 43706726 - 43706872
Alignment:
Q  541 attttgtcccctttcgtcccaaaattg-tgagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttgtaaaaataaaagttcaaacaac 639  Q
    |||||| |||||||| ||||||||||| | |||||| ||||| |||| |  ||||| |  |||||||||||||||||||||| ||||  | ||||| |||    
T  43706726 attttggcccctttcatcccaaaattgctcagaagatgccacgtgtcccggaaaaggggtcataatcgcaactttttgtaaagataaggggtcaaaaaac 43706825  T
Q  640 atatttctcatatgttaggggttaaaagagcatattgccctaaacat 686  Q
    ||||||| | ||||||| |||| ||||||||||||| ||||||||||    
T  43706826 atatttcccttatgttatgggtcaaaagagcatatttccctaaacat 43706872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 541 - 686
Target Start/End: Original strand, 46432288 - 46432435
Alignment:
Q  541 attttgtcccctttcgtcccaaaattg-tgagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttgtaaaaataaaagttcaaacaac 639  Q
    |||||| |||||||| ||||||||||| |  ||||| ||||| |||| || ||||| |  |||||||||||||||||||||| ||||  | ||||| |||    
T  46432288 attttggcccctttcatcccaaaattgctcggaagatgccacgtgtcccagaaaaggggtcataatcgcaactttttgtaaagataaggggtcaaaaaac 46432387  T
Q  640 atatttctcatatgtta-ggggttaaaagagcatattgccctaaacat 686  Q
    ||||||| | ||||||| ||||| ||||||||||||| ||||||||||    
T  46432388 atatttcccttatgttagggggtcaaaagagcatatttccctaaacat 46432435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 570 - 687
Target Start/End: Original strand, 26605379 - 26605495
Alignment:
Q  570 agaagacgccacatgtctcaaaaaagagaccataatcgcaactttttgtaaaaataaaagttcaaacaacatatttctcatatgttaggggttaaaagag 669  Q
    ||||||||| || |||| |||||||  || |||||||| |||||||||||||||||| |  ||||| ||||||||| || |||||||||||| |||| ||    
T  26605379 agaagacgctacgtgtcccaaaaaatcgatcataatcgtaactttttgtaaaaataagatatcaaaaaacatattt-tcttatgttaggggtcaaaatag 26605477  T
Q  670 catattgccctaaacatg 687  Q
    |||||| |||||||||||    
T  26605478 catatttccctaaacatg 26605495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 530 - 686
Target Start/End: Complemental strand, 24750041 - 24749883
Alignment:
Q  530 aaaatgttacgattttgtcccctttcgtcccaaaattg-tgagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttgtaaaaataaaa 628  Q
    |||||||| | |||||| |||||||| ||  ||||||| | |||||||||||| |||  |||||||  | ||||||||||||||||||||||| ||||      
T  24750041 aaaatgttgcaattttggcccctttcatctaaaaattgctaagaagacgccacgtgttccaaaaaatgggccataatcgcaactttttgtaaagataagg 24749942  T
Q  629 gttcaaacaacatatttctcatatgtta-ggggttaaaagagcatattgccctaaacat 686  Q
    | ||||| | |||||||| | ||||||| | ||| ||||||||||||| ||||||||||    
T  24749941 ggtcaaaaagcatatttcccttatgttatgaggtcaaaagagcatatttccctaaacat 24749883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 552 - 686
Target Start/End: Original strand, 4455125 - 4455262
Alignment:
Q  552 tttcgtcccaaaattg-tgagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttgtaaaaataaaagttcaaacaa-catatttctca 649  Q
    |||||||||||||||| |||||||| |||||||||| |||||||  | |||||||||||||||||||  || ||||  | ||||| || |||||||| |     
T  4455125 tttcgtcccaaaattgctgagaagatgccacatgtcccaaaaaaatggccataatcgcaactttttgagaagataagtggtcaaaaaatcatatttccct 4455224  T
Q  650 tatgtta-ggggttaaaagagcatattgccctaaacat 686  Q
    ||||||| ||||| |||||||||||||  |||||||||    
T  4455225 tatgttacggggtcaaaagagcatattttcctaaacat 4455262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 548 - 691
Target Start/End: Complemental strand, 47685326 - 47685181
Alignment:
Q  548 cccctttcgtcccaaaattg-tgagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttgtaaaaataaaagttcaaacaacatatttc 646  Q
    ||||||||| |||||||||| | |||||||||||| ||||  |||||||||  ||| ||||||||||||||||||  |||  | ||||| |||||||||     
T  47685326 cccctttcggcccaaaattgctaagaagacgccacgtgtcctaaaaaagaggtcattatcgcaactttttgtaaaggtaaggggtcaaaaaacatatttt 47685227  T
Q  647 tcatatgttagggg-ttaaaagagcatattgccctaaacatggggt 691  Q
     | ||||||||||| | |||| |||||||| || ||||||||||||    
T  47685226 ccttatgttaggggatcaaaatagcatatttccttaaacatggggt 47685181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 536 - 686
Target Start/End: Original strand, 29182067 - 29182219
Alignment:
Q  536 ttacgattttgtcccctttcgtcccaaaattg-tgagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttgtaaaaataaaagttc-a 633  Q
    |||| |||||| || |||||||| |||||||| ||||||||||| || ||||||||||||  | |||||||||||||||| ||  || ||||  | || |    
T  29182067 ttactattttggcctctttcgtctcaaaattgctgagaagacgcaacgtgtctcaaaaaatgggccataatcgcaactttatgagaagataaggggtcaa 29182166  T
Q  634 aacaacatatttctcatatgttaggggttaaaagagcatattgccctaaacat 686  Q
    || | |||||||| | |||||||||||| ||||||||||||| | ||||||||    
T  29182167 aagatcatatttcccttatgttaggggtcaaaagagcatatttctctaaacat 29182219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 541 - 686
Target Start/End: Complemental strand, 29676311 - 29676164
Alignment:
Q  541 attttgtcccctttcgtcccaaaattgt-gagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttgtaaaaataaaagttcaaacaac 639  Q
    |||||| |||||||| ||  |||||||| |||||| |||||| |||| |||||||| | |||||||||||||||||| |||| ||||  | ||||| | |    
T  29676311 attttggcccctttcatcaaaaaattgttgagaaggcgccacgtgtcccaaaaaaggggccataatcgcaactttttataaagataaggggtcaaaaagc 29676212  T
Q  640 atatttctcatatgttagg-ggttaaaagagcatattgccctaaacat 686  Q
    ||||||| | ||||||||| | | | ||||||||||| ||||||||||    
T  29676211 atatttcacttatgttaggagatcacaagagcatatttccctaaacat 29676164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 541 - 686
Target Start/End: Original strand, 28920728 - 28920870
Alignment:
Q  541 attttgtcccctttcgtcccaaaattg-tgagaagacgccacatgtctcaaaaaa-gagaccataatcgcaactttttgtaaaaataaaagttcaaacaa 638  Q
    |||||| |||||||| ||| ||||||| ||||||||||||||||||| ||||||| | | |||||||||| |||||||||||| ||||  | ||||| |     
T  28920728 attttgacccctttcatccaaaaattgctgagaagacgccacatgtcccaaaaaagggggccataatcgccactttttgtaaagataaggggtcaaaaag 28920827  T
Q  639 catatttctcatatgttagg-ggttaaaagagcatattgccctaaacat 686  Q
    |||||      ||||||||| ||| ||||||||||||| ||||||||||    
T  28920828 catat------tatgttaggaggtcaaaagagcatatttccctaaacat 28920870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 541 - 686
Target Start/End: Original strand, 16551715 - 16551863
Alignment:
Q  541 attttgtcccctttcgtcccaaaattg-tgagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttgtaaaaataaaagttc-aaacaa 638  Q
    |||||| | |||||||||||||||||| |||||||||||||| |||| ||||| |  | |||||||||||||||||||  || ||||  | || ||| |     
T  16551715 attttggcacctttcgtcccaaaattgctgagaagacgccacgtgtcccaaaacaagggccataatcgcaactttttgagaagataaggggtcaaaagat 16551814  T
Q  639 catatttctcatatgtta-ggggttaaaagagcatattgccctaaacat 686  Q
    ||||||| ||  |||||| ||||| ||||||||||||| ||||||||||    
T  16551815 catatttgtctgatgttagggggtcaaaagagcatatttccctaaacat 16551863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 541 - 686
Target Start/End: Complemental strand, 2425456 - 2425309
Alignment:
Q  541 attttgtcccctttcgtcccaaaattg-tgagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttgtaaaaataaaagtt-caaacaa 638  Q
    |||||| ||| |||| ||||||||||| | |||||| ||||| |||| || ||||  |  |||||||||||||||||||||| ||||  |||  ||| ||    
T  2425456 attttggcccatttcatcccaaaattgctcagaagatgccacgtgtcccagaaaatgggtcataatcgcaactttttgtaaagataagggttaaaaaaaa 2425357  T
Q  639 catatttctcatatgttag-gggttaaaagagcatattgccctaaacat 686  Q
    |||||||| | |||||||| |||| ||||||||||||| ||||||||||    
T  2425356 catatttcccttatgttagagggtcaaaagagcatatt-ccctaaacat 2425309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 551 - 617
Target Start/End: Original strand, 9554283 - 9554350
Alignment:
Q  551 ctttcgtcccaaaattgt-gagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttg 617  Q
    |||||||||||||||||| |||||| |||||| |||||||||| || | ||||| |||||||||||||    
T  9554283 ctttcgtcccaaaattgtagagaaggcgccacgtgtctcaaaacaggggccatagtcgcaactttttg 9554350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 549 - 686
Target Start/End: Original strand, 51719202 - 51719340
Alignment:
Q  549 ccctttcgtcccaaaattg-tgagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttgtaaaaataaaagttcaaacaacatatttct 647  Q
    ||||||| | ||||||||| | |||||| ||||| | ||||| ||||| |  |||||||||||||||||||||| ||||  | | ||| |||||||||      
T  51719202 ccctttcattccaaaattgctcagaagatgccacgtatctcagaaaaggggtcataatcgcaactttttgtaaagataaggggt-aaaaaacatattttc 51719300  T
Q  648 catatgttagggg-ttaaaagagcatattgccctaaacat 686  Q
    | ||||||||||| | ||||||||||||| ||||||||||    
T  51719301 cttatgttaggggatcaaaagagcatatttccctaaacat 51719340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 719 - 760
Target Start/End: Complemental strand, 4059572 - 4059530
Alignment:
Q  719 gccaaaatcgcaacattttgaaacata-ggggcgaaaagtgca 760  Q
    ||||||||||||||||||||||||||| |||||||||||||||    
T  4059572 gccaaaatcgcaacattttgaaacatagggggcgaaaagtgca 4059530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 719 - 768
Target Start/End: Original strand, 24196515 - 24196565
Alignment:
Q  719 gccaaaatcgcaacattttgaaacatagg-ggcgaaaagtgcagttgagcc 768  Q
    ||||||||||||||||||| ||||||||| |||||||||||||||| ||||    
T  24196515 gccaaaatcgcaacattttaaaacataggaggcgaaaagtgcagtttagcc 24196565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 719 - 760
Target Start/End: Complemental strand, 48471913 - 48471871
Alignment:
Q  719 gccaaaatcgcaacattttgaaacatagggg-cgaaaagtgca 760  Q
    ||||||||||||||||||||||||||||||| |||||||||||    
T  48471913 gccaaaatcgcaacattttgaaacataggggacgaaaagtgca 48471871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 719 - 763
Target Start/End: Complemental strand, 43706704 - 43706659
Alignment:
Q  719 gccaaaatcgcaacattttgaaacata-ggggcgaaaagtgcagtt 763  Q
    ||||||||||||||||| ||||||||| ||||||||||||||||||    
T  43706704 gccaaaatcgcaacattatgaaacatagggggcgaaaagtgcagtt 43706659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 568 - 616
Target Start/End: Complemental strand, 16858535 - 16858487
Alignment:
Q  568 tgagaagacgccacatgtctcaaaaaagagaccataatcgcaacttttt 616  Q
    ||||||| ||||||||||| |||||||| | ||||||||||||||||||    
T  16858535 tgagaagccgccacatgtcccaaaaaaggggccataatcgcaacttttt 16858487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 719 - 768
Target Start/End: Original strand, 2425477 - 2425527
Alignment:
Q  719 gccaaaatcgcaacattttgaaacata-ggggcgaaaagtgcagttgagcc 768  Q
    ||||||||||||||||| ||||||||| ||||| |||||||||||| ||||    
T  2425477 gccaaaatcgcaacattatgaaacatagggggcaaaaagtgcagtttagcc 2425527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 719 - 768
Target Start/End: Complemental strand, 3616849 - 3616799
Alignment:
Q  719 gccaaaatcgcaacattttgaaacatag-gggcgaaaagtgcagttgagcc 768  Q
    |||||||||||||||||||||||| ||| |||||||||||| |||| ||||    
T  3616849 gccaaaatcgcaacattttgaaacttagagggcgaaaagtgaagtttagcc 3616799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 719 - 768
Target Start/End: Complemental strand, 24196311 - 24196261
Alignment:
Q  719 gccaaaatcgcaacattttgaaacata-ggggcgaaaagtgcagttgagcc 768  Q
    |||||||||||||||||||||||| || ||||||||||||| |||| ||||    
T  24196311 gccaaaatcgcaacattttgaaacttagggggcgaaaagtggagtttagcc 24196261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 719 - 768
Target Start/End: Original strand, 24750023 - 24750073
Alignment:
Q  719 gccaaaatcgcaacattttgaaacata-ggggcgaaaagtgcagttgagcc 768  Q
    |||||||| |||||||||| ||||||| |||||||||||||||||| ||||    
T  24750023 gccaaaattgcaacattttaaaacatagggggcgaaaagtgcagtttagcc 24750073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 719 - 768
Target Start/End: Complemental strand, 27092903 - 27092853
Alignment:
Q  719 gccaaaatcgcaacattttgaaacata-ggggcgaaaagtgcagttgagcc 768  Q
    |||||||||| |||||||||||||||| ||||||| |||||||||| ||||    
T  27092903 gccaaaatcgtaacattttgaaacatagggggcgagaagtgcagtttagcc 27092853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 719 - 768
Target Start/End: Original strand, 28920905 - 28920955
Alignment:
Q  719 gccaaaatcgcaacattttgaaacata-ggggcgaaaagtgcagttgagcc 768  Q
    |||||||||||||||||||||||| || ||||||||||||| |||| ||||    
T  28920905 gccaaaatcgcaacattttgaaacttagggggcgaaaagtgaagtttagcc 28920955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 719 - 760
Target Start/End: Complemental strand, 46432266 - 46432224
Alignment:
Q  719 gccaaaatcgcaacattttgaaacata-ggggcgaaaagtgca 760  Q
    ||||||||||||||||| ||||||||| |||||||||||||||    
T  46432266 gccaaaatcgcaacattatgaaacatagggggcgaaaagtgca 46432224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 719 - 768
Target Start/End: Complemental strand, 51719173 - 51719123
Alignment:
Q  719 gccaaaatcgcaacattttgaaacatag-gggcgaaaagtgcagttgagcc 768  Q
    |||||||| |||||||| |||||||||| ||||||||||||||||| ||||    
T  51719173 gccaaaattgcaacattatgaaacatagagggcgaaaagtgcagtttagcc 51719123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 711 - 763
Target Start/End: Complemental strand, 4455100 - 4455047
Alignment:
Q  711 aataagaagccaaaatcgcaacattttgaaacatagggg-cgaaaagtgcagtt 763  Q
    |||||| ||| |||||||||||||||| |||| |||||| ||||||||||||||    
T  4455100 aataaggagctaaaatcgcaacattttaaaacttaggggtcgaaaagtgcagtt 4455047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 720 - 760
Target Start/End: Complemental strand, 28552354 - 28552313
Alignment:
Q  720 ccaaaatcgcaacattttgaaacata-ggggcgaaaagtgca 760  Q
    ||||||||||||||||||||||| || |||||||||||||||    
T  28552354 ccaaaatcgcaacattttgaaacttagggggcgaaaagtgca 28552313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 552 - 660
Target Start/End: Original strand, 31084695 - 31084804
Alignment:
Q  552 tttcgtcccaaaattgt-gagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttgtaaaaataaaagttcaaacaacatatttctcat 650  Q
    |||||| |||||||||| |||||  | ||||||||| |||||| | |  |||||||| ||||||||||||| ||||  | ||||| | |||||||  |||    
T  31084695 tttcgttccaaaattgttgagaaagccccacatgtcccaaaaagggggtcataatcgaaactttttgtaaagataaggggtcaaaaagcatattttccat 31084794  T
Q  651 atgttagggg 660  Q
    ||||||||||    
T  31084795 atgttagggg 31084804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 719 - 768
Target Start/End: Original strand, 50334818 - 50334867
Alignment:
Q  719 gccaaaatcgcaacattttgaaacataggggcgaaaagtgcagttgagcc 768  Q
    ||||||||  ||||||||||||||||||||||||||| | ||||| ||||    
T  50334818 gccaaaattacaacattttgaaacataggggcgaaaaatacagtttagcc 50334867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 68; Significance: 6e-30; HSPs: 31)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 541 - 686
Target Start/End: Original strand, 19391459 - 19391606
Alignment:
Q  541 attttgtcccctttcgtcccaaaattg-tgagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttgtaaaaataaaagttcaaacaac 639  Q
    |||||| |||||||| ||| ||||||| |||||||||||||| |||| |||||||| | ||||||||||||||||||||||| ||||  | ||||| |||    
T  19391459 attttggcccctttcatccaaaaattgctgagaagacgccacgtgtcccaaaaaaggggccataatcgcaactttttgtaaagataaggggtcaaaaaac 19391558  T
Q  640 atatttctcatatgttagg-ggttaaaagagcatattgccctaaacat 686  Q
    ||||||| | ||||||||| ||| ||||||||||||| ||||||||||    
T  19391559 atatttcccttatgttaggaggtcaaaagagcatatttccctaaacat 19391606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 541 - 686
Target Start/End: Original strand, 5192343 - 5192490
Alignment:
Q  541 attttgtcccctttcgtcccaaaattg-tgagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttgtaaaaataaaagttcaaacaac 639  Q
    |||||| |||||||  ||| ||||||| |||||||||||||| |||| |||||||| | ||||||||||||||||||||||| |||| || ||||| |||    
T  5192343 attttggccccttttatccaaaaattgctgagaagacgccacgtgtcccaaaaaaggggccataatcgcaactttttgtaaagataagaggtcaaaaaac 5192442  T
Q  640 atatttctcatatgtt-aggggttaaaagagcatattgccctaaacat 686  Q
    ||||||| | |||||| || ||| ||||||||||||| ||||||||||    
T  5192443 atatttcccttatgttaagaggtcaaaagagcatatttccctaaacat 5192490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 541 - 686
Target Start/End: Original strand, 12723333 - 12723480
Alignment:
Q  541 attttgtcccctttcgtcccaaaattg-tgagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttgtaaaaataaaagttcaaacaac 639  Q
    |||||| |||||||| | | ||||||| |||||||||||||  |||| |||||||| ||||||||||||||||||||||||| ||||  | ||||| |||    
T  12723333 attttggcccctttcatgcaaaaattgctgagaagacgccatgtgtcccaaaaaagggaccataatcgcaactttttgtaaagataacgggtcaaaaaac 12723432  T
Q  640 atatttctcatatgttagg-ggttaaaagagcatattgccctaaacat 686  Q
    ||||||| | ||||||||| ||| ||||||||||||| | ||||||||    
T  12723433 atatttcccttatgttaggaggtcaaaagagcatatttctctaaacat 12723480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 541 - 691
Target Start/End: Complemental strand, 1824836 - 1824685
Alignment:
Q  541 attttgtcccctttcgtcccaaaattgt-gagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttgtaaaaataa-aagttcaaacaa 638  Q
    |||||| ||||||||||| ||||||||| ||||||||||||| |||| ||||| | || ||||| |||||||||||||  || |||| ||||| ||| |     
T  1824836 attttggcccctttcgtctcaaaattgttgagaagacgccacgtgtcccaaaaca-aggccatactcgcaactttttgagaagataagaagttaaaagat 1824738  T
Q  639 catatttctcatatgttaggggttaaaagagcatattgccctaaacatggggt 691  Q
    |||||||  | |||||||||||| ||||||||||||| |||||||||||||||    
T  1824737 catattttccttatgttaggggtcaaaagagcatatttccctaaacatggggt 1824685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 541 - 691
Target Start/End: Complemental strand, 1859281 - 1859130
Alignment:
Q  541 attttgtcccctttcgtcccaaaattgt-gagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttgtaaaaataa-aagttcaaacaa 638  Q
    |||||| ||||||||||| ||||||||| ||||||||||||| |||| ||||| | || ||||| |||||||||||||  || |||| ||||| ||| |     
T  1859281 attttggcccctttcgtctcaaaattgttgagaagacgccacgtgtcccaaaaca-aggccatactcgcaactttttgagaagataagaagttaaaagat 1859183  T
Q  639 catatttctcatatgttaggggttaaaagagcatattgccctaaacatggggt 691  Q
    |||||||  | |||||||||||| ||||||||||||| |||||||||||||||    
T  1859182 catattttccttatgttaggggtcaaaagagcatatttccctaaacatggggt 1859130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 560 - 686
Target Start/End: Original strand, 4518958 - 4519086
Alignment:
Q  560 caaaattgt-gagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttgtaaaaataaaagttcaaacaacatatttctcatatgttagg 658  Q
    ||||||||| ||||||||||||| |||| |||||||| | ||||||||||||||||||||||| ||||  | ||||| |||||||||| | |||||||||    
T  4518958 caaaattgttgagaagacgccacgtgtcccaaaaaaggggccataatcgcaactttttgtaaagataaggggtcaaaaaacatatttcccttatgttagg 4519057  T
Q  659 -ggttaaaagagcatattgccctaaacat 686  Q
     | | ||||||||||||| ||||||||||    
T  4519058 agatcaaaagagcatatttccctaaacat 4519086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 541 - 683
Target Start/End: Original strand, 22452245 - 22452389
Alignment:
Q  541 attttgtcccctttcgtcccaaaattg-tgagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttgtaaaaataaaagttcaaacaac 639  Q
    |||||| ||| |||||||||||||||| |||||||||||||| |||| |||||||  | | ||| ||||||||||||||||| |||| || ||||| | |    
T  22452245 attttggcccatttcgtcccaaaattgctgagaagacgccacgtgtcccaaaaaaagggctatattcgcaactttttgtaaagataagaggtcaaaaagc 22452344  T
Q  640 atatttctcatatgttagg-ggttaaaagagcatattgccctaaa 683  Q
    ||||||| | ||||||||| ||| ||||||||||||| |||||||    
T  22452345 atatttcccttatgttaggaggtcaaaagagcatatttccctaaa 22452389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 541 - 686
Target Start/End: Original strand, 8802472 - 8802618
Alignment:
Q  541 attttgtcccctttcgtcccaaaattg-tgagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttgtaaaaataaaagttcaaacaac 639  Q
    |||||| |||| ||| ||||||||||| ||||||||||||||||||  |||||||| | ||||||||||||||||||||||| ||||  | ||||| ||     
T  8802472 attttggcccccttcatcccaaaattgctgagaagacgccacatgttccaaaaaaggggccataatcgcaactttttgtaaagataaggggtcaaa-aag 8802570  T
Q  640 atatttctcatatgttagg-ggttaaaagagcatattgccctaaacat 686  Q
     |||||| | ||||||||| ||| ||||||||||||| ||||||||||    
T  8802571 ctatttcccttatgttaggaggtcaaaagagcatatttccctaaacat 8802618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 541 - 686
Target Start/End: Complemental strand, 38630287 - 38630140
Alignment:
Q  541 attttgtcccctttcgtcccaaaattg-tgagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttgtaaaaataaaagttcaaacaac 639  Q
    |||||| |||| ||| || |||||||| |||||||||||||| |||| |||||||| |  |||||||||||||||||||||| ||||  | ||||| | |    
T  38630287 attttggcccccttcatctcaaaattgctgagaagacgccacgtgtcccaaaaaaggggtcataatcgcaactttttgtaaagataaggggtcaaaaagc 38630188  T
Q  640 atatttctcatatgttagg-ggttaaaagagcatattgccctaaacat 686  Q
    ||||||| | ||||||||| ||| ||||||||||||| ||||||||||    
T  38630187 atatttcccttatgttaggaggtcaaaagagcatatttccctaaacat 38630140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 541 - 690
Target Start/End: Original strand, 21666346 - 21666497
Alignment:
Q  541 attttgtcccctttcgtcccaaaattg-tgagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttgtaaaaataaaagttcaaacaac 639  Q
    |||||| |||| |||||| |||||||| |||||||||||||  |||| |||||||| | ||||||| |||||||| | |||| ||||  | ||||| |||    
T  21666346 attttggcccccttcgtctcaaaattgctgagaagacgccatgtgtcccaaaaaaggggccataattgcaactttatctaaagataaggggtcaaaaaac 21666445  T
Q  640 atatttctcatatgtta-ggggttaaaagagcatattgccctaaacatgggg 690  Q
    ||||||| | ||||||| ||||| || |||||||||| ||||||||||||||    
T  21666446 atatttcccttatgttagggggtcaagagagcatatttccctaaacatgggg 21666497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 541 - 686
Target Start/End: Original strand, 30784337 - 30784483
Alignment:
Q  541 attttgtcccctttcgtcccaaaattg-tgagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttgtaaaaataaaagttcaaacaac 639  Q
    |||||| |||| ||| ||| ||||||| |||||||| | ||| |||| |||||||| | ||||||||||||||||||||||| ||||  | ||||| |||    
T  30784337 attttggccccattcatccaaaaattgctgagaagaagtcacgtgtcccaaaaaaggg-ccataatcgcaactttttgtaaagataaggggtcaaaaaac 30784435  T
Q  640 atatttctcatatgttagg-ggttaaaagagcatattgccctaaacat 686  Q
    ||||||| | ||||||||| ||| ||||||||||||| ||||||||||    
T  30784436 atatttcccttatgttaggaggtcaaaagagcatatttccctaaacat 30784483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 543 - 691
Target Start/End: Original strand, 18252960 - 18253110
Alignment:
Q  543 tttgtcccctttcgtcccaaaattg-tgagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttgtaaaaataaaagttcaaacaa-ca 640  Q
    |||| |||||||||||||||||||| |||||||||||||| |||| ||||| || | |||||||| ||||||||||  || ||||  | ||||| || ||    
T  18252960 tttggcccctttcgtcccaaaattgctgagaagacgccacgtgtcccaaaacagtggccataatcacaactttttgagaagataaggggtcaaaaaatca 18253059  T
Q  641 tatttctcatatgttaggggttaaaagagcatattgccctaaacatggggt 691  Q
    |||||| | ||||||| |||| |||| | |||||| |||||||||||||||    
T  18253060 tatttcccttatgttatgggtcaaaaaaacatatttccctaaacatggggt 18253110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 543 - 686
Target Start/End: Complemental strand, 17648473 - 17648328
Alignment:
Q  543 tttgtcccctttcgtcccaaaattg-tgagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttgtaaaaataaaagttcaaacaacat 641  Q
    |||| |||||||| ||| ||||||| |||||||| ||||| ||||  ||||| | | ||||||||||||||||||||||| ||||  | ||||| | |||    
T  17648473 tttggcccctttcatccaaaaattgctgagaagaggccacgtgtcctaaaaagggggccataatcgcaactttttgtaaagataaggggtcaaaaagcat 17648374  T
Q  642 atttctcatatgttagg-ggttaaaagagcatattgccctaaacat 686  Q
    ||||| | ||||||||| ||| ||||||||||||| ||||||||||    
T  17648373 atttcccttatgttaggaggtcaaaagagcatatttccctaaacat 17648328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 541 - 686
Target Start/End: Complemental strand, 33895605 - 33895459
Alignment:
Q  541 attttgtcccctttcgtcccaaaattg-tgagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttgtaaaaataaaagttcaaacaac 639  Q
    |||||| |||||||| ||| ||||||  |||||||||||||| ||||  ||||||| | ||||||| ||||||||||||||| ||||  | | ||| |||    
T  33895605 attttggcccctttcatccaaaaatttctgagaagacgccacgtgtccaaaaaaaggg-ccataattgcaactttttgtaaagataaggggttaaaaaac 33895507  T
Q  640 atatttctcatatgttagg-ggttaaaagagcatattgccctaaacat 686  Q
    ||||||| | ||||||||| ||| ||||||||||||| ||||||||||    
T  33895506 atatttcccttatgttaggaggtcaaaagagcatatttccctaaacat 33895459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 541 - 691
Target Start/End: Original strand, 7117186 - 7117339
Alignment:
Q  541 attttgtcccctttcgtcccaaaattg-tgagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttgtaaaaataa-aagttcaaacaa 638  Q
    |||||| |||||||||||| |||| || ||||||||||||||||||| |||||||  | ||||||| ||||||||||||||| ||||   ||| ||| ||    
T  7117186 attttggcccctttcgtcctaaaactgctgagaagacgccacatgtcccaaaaaaagggccataattgcaactttttgtaaagataaggggttaaaagaa 7117285  T
Q  639 catatttctcatatgttag-gggttaaaagagcatattgccctaaacatggggt 691  Q
    || ||| | | | |||||| |||| ||||||||||||| | |||||||||||||    
T  7117286 cacattccccttctgttagtgggtcaaaagagcatatttctctaaacatggggt 7117339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 568 - 686
Target Start/End: Original strand, 4807700 - 4807819
Alignment:
Q  568 tgagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttgtaaaaataaaagttcaaacaacatatttctcatatgttagg-ggttaaaa 666  Q
    |||||||||||||| |||  |||||||| | ||||||||||||||||||||||| ||||  | ||||| | |||||||| | ||||||||| ||| ||||    
T  4807700 tgagaagacgccacgtgttccaaaaaaggggccataatcgcaactttttgtaaagataaggggtcaaaaagcatatttcccttatgttaggaggtcaaaa 4807799  T
Q  667 gagcatattgccctaaacat 686  Q
    || |||||| || |||||||    
T  4807800 gaacatatttccttaaacat 4807819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 568 - 686
Target Start/End: Complemental strand, 19924469 - 19924350
Alignment:
Q  568 tgagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttgtaaaaataaaagttcaaacaacatatttctcatatgttagg-ggttaaaa 666  Q
    |||||||||||||| |||| |||||||| |  |||||||||||||||||||||| ||||  | ||||| | |||||||| | ||||||||| ||| | ||    
T  19924469 tgagaagacgccacgtgtcccaaaaaaggggtcataatcgcaactttttgtaaagataaggggtcaaaaagcatatttcccttatgttaggaggtcagaa 19924370  T
Q  667 gagcatattgccctaaacat 686  Q
    ||| ||||| ||||||||||    
T  19924369 gagtatatttccctaaacat 19924350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 541 - 626
Target Start/End: Complemental strand, 23565321 - 23565235
Alignment:
Q  541 attttgtcccctttcgtcccaaaattg-tgagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttgtaaaaataa 626  Q
    |||||| |||||||| ||| ||||||| |||||||||||||||||| | ||||||  | ||||||||||||||||||||||| ||||    
T  23565321 attttggcccctttcatccaaaaattgctgagaagacgccacatgtttaaaaaaaagggccataatcgcaactttttgtaaagataa 23565235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 720 - 768
Target Start/End: Complemental strand, 19391436 - 19391388
Alignment:
Q  720 ccaaaatcgcaacattttgaaacataggggcgaaaagtgcagttgagcc 768  Q
    ||||||| |||||||||||||||||||||||||||||||||||| ||||    
T  19391436 ccaaaattgcaacattttgaaacataggggcgaaaagtgcagtttagcc 19391388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 551 - 686
Target Start/End: Complemental strand, 3208202 - 3208065
Alignment:
Q  551 ctttcgtcccaaaattg-tgagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttgtaaaaataaaagttc-aaacaacatatttctc 648  Q
    ||||||||||||||||  |||||||||||||| |||| |||||||  |  |||||||||||||||||   || ||||  | || ||| | |||||||| |    
T  3208202 ctttcgtcccaaaattactgagaagacgccacgtgtcccaaaaaatgggtcataatcgcaactttttaagaagataaggggtcaaaatatcatatttccc 3208103  T
Q  649 atatgttaggggttaaaagagcatattgccctaaacat 686  Q
     |||||||||||| |||||| |||||| ||||||||||    
T  3208102 ttatgttaggggtcaaaagaacatatttccctaaacat 3208065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 541 - 690
Target Start/End: Complemental strand, 31268511 - 31268360
Alignment:
Q  541 attttgtcccctttcgtcccaaaattg-tgagaagacgccacatgtctcaaaaaa-gagaccataatcgcaactttttgtaaaaataaaagttc-aaaca 637  Q
    |||||| |||||||||||| ||||||| | |||||||||| |||||| ||||||| | || ||||||| ||||||||| |||| ||||| | || ||| |    
T  31268511 attttggcccctttcgtcctaaaattgctaagaagacgccgcatgtcccaaaaaaggggatcataatcacaactttttataaagataaagggtctaaaga 31268412  T
Q  638 acatatttctcatatgttaggggttaaaagagcatattgccctaaacatgggg 690  Q
     |||| ||| | ||||||| |||  ||||||||||||| ||||||||| ||||    
T  31268411 gcata-ttcccttatgttatggggcaaaagagcatatttccctaaacacgggg 31268360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 549 - 686
Target Start/End: Original strand, 32400402 - 32400541
Alignment:
Q  549 ccctttcgtcccaaaattg-tgagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttgtaaaaataaaagttcaaacaacatatttct 647  Q
    ||||||| | ||||||||| ||||||||| |||| |||  |||||||| |  |||||| ||||||||||||||| ||||| | |||||   ||||||||     
T  32400402 ccctttcataccaaaattgctgagaagacaccacgtgttccaaaaaaggggtcataattgcaactttttgtaaagataaatggtcaaaaggcatatttcc 32400501  T
Q  648 catatgtta-ggggttaaaagagcatattgccctaaacat 686  Q
    | ||||||| ||||| ||||| ||||||| | ||||||||    
T  32400502 cttatgttagggggtcaaaagcgcatatttcactaaacat 32400541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 557 - 686
Target Start/End: Complemental strand, 44147186 - 44147056
Alignment:
Q  557 tcccaaaattg-tgagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttgtaaaaataaaagttcaaacaacatatttctcatatgtt 655  Q
    ||||||||||| |||||||||||||  | || |||||||| |  |||||||||||| ||||||||| ||||  | ||||| | |||||||| | ||||||    
T  44147186 tcccaaaattgctgagaagacgccatgtatcccaaaaaaggggtcataatcgcaac-ttttgtaaagataaggggtcaaaaagcatatttcccttatgtt 44147088  T
Q  656 agg-ggttaaaagagcatattgccctaaacat 686  Q
    ||| ||| |||| |||||||| ||||||||||    
T  44147087 aggaggtcaaaatagcatatttccctaaacat 44147056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 719 - 768
Target Start/End: Complemental strand, 4807650 - 4807600
Alignment:
Q  719 gccaaaatcgcaacattttgaaacatagg-ggcgaaaagtgcagttgagcc 768  Q
    |||||||| |||||||||||||||||||| |||||||||||||||| ||||    
T  4807650 gccaaaattgcaacattttgaaacataggaggcgaaaagtgcagtttagcc 4807600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 543 - 615
Target Start/End: Original strand, 17813010 - 17813083
Alignment:
Q  543 tttgtcccctttcgtcccaaaattgt-gagaagacgccacatgtctcaaaaaagagaccataatcgcaactttt 615  Q
    |||| |||||||||| |||||||||| || ||||  |||| |||||||||||||||  ||||||||||||||||    
T  17813010 tttgacccctttcgttccaaaattgttgaaaagataccacgtgtctcaaaaaagaggtcataatcgcaactttt 17813083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 719 - 768
Target Start/End: Complemental strand, 5192322 - 5192272
Alignment:
Q  719 gccaaaatcgcaacattttgaaacata-ggggcgaaaagtgcagttgagcc 768  Q
    |||||||| |||||||||||||||||| ||||||||||||| |||| ||||    
T  5192322 gccaaaattgcaacattttgaaacatagggggcgaaaagtgaagtttagcc 5192272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 541 - 626
Target Start/End: Original strand, 18881575 - 18881661
Alignment:
Q  541 attttgtcccctttcgtcccaaaattg-tgagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttgtaaaaataa 626  Q
    |||||| |||| ||||||||||||||| ||||||||| |||  |||| |||| ||| |  |||||| ||||||||||||||| ||||    
T  18881575 attttggcccccttcgtcccaaaattgttgagaagacaccaagtgtcccaaataaggggtcataattgcaactttttgtaaagataa 18881661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 719 - 768
Target Start/End: Original strand, 19392820 - 19392870
Alignment:
Q  719 gccaaaatcgcaacattttgaaacatag-gggcgaaaagtgcagttgagcc 768  Q
    |||||||||||||||||||||||| ||| |||||||||||| |||| ||||    
T  19392820 gccaaaatcgcaacattttgaaacttagagggcgaaaagtgaagtttagcc 19392870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 711 - 768
Target Start/End: Original strand, 30784510 - 30784568
Alignment:
Q  711 aataagaagccaaaatcgcaacattttgaaacatag-gggcgaaaagtgcagttgagcc 768  Q
    ||||||  |||||||||||||||||||||||| ||| |||||||||||| |||| ||||    
T  30784510 aataaggggccaaaatcgcaacattttgaaacttagagggcgaaaagtgaagtttagcc 30784568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 719 - 760
Target Start/End: Original strand, 44147224 - 44147266
Alignment:
Q  719 gccaaaatcgcaacattttgaaacata-ggggcgaaaagtgca 760  Q
    ||||||||||||| ||||||||||||| |||||||||||||||    
T  44147224 gccaaaatcgcaatattttgaaacatatggggcgaaaagtgca 44147266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 719 - 763
Target Start/End: Original strand, 12723515 - 12723560
Alignment:
Q  719 gccaaaatcgcaacattttgaaacatag-gggcgaaaagtgcagtt 763  Q
    |||||||||||||||||||||||| ||| |||||||||||| ||||    
T  12723515 gccaaaatcgcaacattttgaaacttagagggcgaaaagtgaagtt 12723560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 68; Significance: 6e-30; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 541 - 686
Target Start/End: Original strand, 16901069 - 16901216
Alignment:
Q  541 attttgtcccctttcgtcccaaaattg-tgagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttgtaaaaataaaagttcaaacaac 639  Q
    |||||| ||| |||| ||||||||||| |||||||||||||| |||| |||||||| | ||||||||||||||||||||||| ||||  | ||||| |||    
T  16901069 attttggcccatttcatcccaaaattgctgagaagacgccacgtgtcccaaaaaaggggccataatcgcaactttttgtaaagataaggggtcaaaaaac 16901168  T
Q  640 atatttctcatatgttagg-ggttaaaagagcatattgccctaaacat 686  Q
    ||||||| | ||||||||| ||| ||||||||||||| ||||||||||    
T  16901169 atatttcccttatgttaggaggtcaaaagagcatatttccctaaacat 16901216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 541 - 686
Target Start/End: Original strand, 25556947 - 25557094
Alignment:
Q  541 attttgtcccctttcgtcccaaaattg-tgagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttgtaaaaataaaagttcaaacaac 639  Q
    |||||| |||||||| ||||||||||| |||||||||||||| |||| |||||||| | ||||||| ||||||||||||||| ||||  | ||||| |||    
T  25556947 attttggcccctttcatcccaaaattgctgagaagacgccacgtgtcccaaaaaaggggccataattgcaactttttgtaaagataaggggtcaaaaaac 25557046  T
Q  640 atatttctcatatgtta-ggggttaaaagagcatattgccctaaacat 686  Q
    ||||||| | ||||||| ||||| ||||||||||||| ||||||||||    
T  25557047 atatttcccttatgttagggggtcaaaagagcatatttccctaaacat 25557094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 541 - 686
Target Start/End: Complemental strand, 18695235 - 18695088
Alignment:
Q  541 attttgtcccctttcgtcccaaaattg-tgagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttgtaaaaataaaagttcaaacaac 639  Q
    |||||| |||||||| || |||||||| |||||||||||||| |||| |||||||| | ||||||||||||||||||||||| ||||  | ||||| | |    
T  18695235 attttggcccctttcatctcaaaattgctgagaagacgccacgtgtcccaaaaaaggggccataatcgcaactttttgtaaagataaggggtcaaaaagc 18695136  T
Q  640 atatttctcatatgttagg-ggttaaaagagcatattgccctaaacat 686  Q
    ||||||| | ||||||||| ||| ||||||||||||| ||||||||||    
T  18695135 atatttcccttatgttaggaggtcaaaagagcatatttccctaaacat 18695088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 536 - 687
Target Start/End: Original strand, 17825564 - 17825717
Alignment:
Q  536 ttacgattttgtcccctttcgtcccaaaattgtg-agaagacgccacatgtctcaaaaaagagaccataatcgcaactttttgtaaaaataaaagttcaa 634  Q
    |||| |||||| |||||||| || ||||||| |  |||||||||||| |||| |||||||| | |||||||||||||||||||  || ||||| | ||||    
T  17825564 ttacaattttggcccctttcatctcaaaattttttagaagacgccacgtgtcccaaaaaaggggccataatcgcaactttttgacaagataaagggtcaa 17825663  T
Q  635 ac-aacatatttctcatatgttaggggttaaaagagcatattgccctaaacatg 687  Q
    |  |||||||||||| |||||||||||| ||||||||||||| |||||||||||    
T  17825664 aagaacatatttctcttatgttaggggtcaaaagagcatatttccctaaacatg 17825717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 541 - 686
Target Start/End: Complemental strand, 245826 - 245679
Alignment:
Q  541 attttgtcccctttcgtcccaaaattg-tgagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttgtaaaaataaaagttcaaacaac 639  Q
    |||||| |||| ||| ||| ||||||| |||||||||||||| |||| |||||||| | ||||||||||||||||||||||| ||||  | ||||| | |    
T  245826 attttggcccccttcatccgaaaattgctgagaagacgccacgtgtcccaaaaaaggggccataatcgcaactttttgtaaagataaggggtcaaaaagc 245727  T
Q  640 atatttctcatatgttagg-ggttaaaagagcatattgccctaaacat 686  Q
    ||||||| | ||||||||| ||| ||||||||||||| ||||||||||    
T  245726 atatttcccttatgttaggaggtcaaaagagcatatttccctaaacat 245679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 541 - 686
Target Start/End: Original strand, 26639109 - 26639256
Alignment:
Q  541 attttgtcccctttcgtcccaaaattgt-gagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttgtaaaaataaaagttcaaacaac 639  Q
    |||||| |||| ||| |||||||||||| ||||||||||||| |||| |||||||||| ||||||| ||||||||||||||| ||||  | |||||   |    
T  26639109 attttggcccccttcatcccaaaattgttgagaagacgccacgtgtcccaaaaaagaggccataattgcaactttttgtaaagataaggggtcaaaacgc 26639208  T
Q  640 atatttctcatatgttagg-ggttaaaagagcatattgccctaaacat 686  Q
    ||||||| | ||||||||| ||| ||||||||||||| ||||||||||    
T  26639209 atatttcccttatgttaggaggtcaaaagagcatatttccctaaacat 26639256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 568 - 686
Target Start/End: Original strand, 23765492 - 23765609
Alignment:
Q  568 tgagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttgtaaaaataaaagttcaaacaacatatttctcatatgttagg-ggttaaaa 666  Q
    |||||||||||||| |||| ||||||| |||||||||||||||||||||||||| ||||| | ||||| | |||||||| | ||||||||| ||| ||||    
T  23765492 tgagaagacgccacgtgtc-caaaaaa-agaccataatcgcaactttttgtaaagataaatgatcaaaaagcatatttcccttatgttaggaggtcaaaa 23765589  T
Q  667 gagcatattgccctaaacat 686  Q
    ||||||||| ||||||||||    
T  23765590 gagcatatttccctaaacat 23765609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 568 - 686
Target Start/End: Original strand, 23815340 - 23815457
Alignment:
Q  568 tgagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttgtaaaaataaaagttcaaacaacatatttctcatatgttagg-ggttaaaa 666  Q
    |||||||||||||| |||| ||||||| |||||||||||||||||||||||||| ||||| | ||||| | |||||||| | ||||||||| ||| ||||    
T  23815340 tgagaagacgccacgtgtc-caaaaaa-agaccataatcgcaactttttgtaaagataaatgatcaaaaagcatatttcccttatgttaggaggtcaaaa 23815437  T
Q  667 gagcatattgccctaaacat 686  Q
    ||||||||| ||||||||||    
T  23815438 gagcatatttccctaaacat 23815457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 549 - 686
Target Start/End: Complemental strand, 10379505 - 10379367
Alignment:
Q  549 ccctttcgtcccaaaattg-tgagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttgtaaaaataaaagttcaaacaacatatttct 647  Q
    ||||||| ||||||||||  | |||||| ||||| ||||||| ||||| |  |||||||||||||||||||||| ||||  | ||||| ||||||||||     
T  10379505 ccctttcatcccaaaatttctcagaagatgccacttgtctcagaaaaggggtcataatcgcaactttttgtaaagataaggggtcaaaaaacatatttcc 10379406  T
Q  648 catatgttaggggttaaaagagcatattgccctaaacat 686  Q
    | |||||||||||| |||||||||||||  |||||||||    
T  10379405 cttatgttaggggtcaaaagagcatattttcctaaacat 10379367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 541 - 685
Target Start/End: Original strand, 40428711 - 40428857
Alignment:
Q  541 attttgtcccctttcgtcccaaaattg-tgagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttgtaaaaataaaagttcaaacaac 639  Q
    |||||| |||| ||||||||||||||| |||||||||||||| |||| |||||||| |  ||||||||||| |||||||||| ||||  | ||||| | |    
T  40428711 attttggcccccttcgtcccaaaattgctgagaagacgccacgtgtcccaaaaaaggggtcataatcgcaattttttgtaaagataaggggtcaaaaagc 40428810  T
Q  640 atatttctcatatgttagg-ggttaaaagagcatattgccctaaaca 685  Q
    ||||||| | ||||||||| ||| |||||| |||||| |||||||||    
T  40428811 atatttcccttatgttaggaggtcaaaagaacatatttccctaaaca 40428857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 536 - 691
Target Start/End: Original strand, 41663590 - 41663748
Alignment:
Q  536 ttacgattttgtcccctttcgtcccaaaattg-tgagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttgtaaaaataaaagttcaa 634  Q
    |||| |||||| ||| |||||||||||||||| | |||||| ||||| |||| |||||||| | |||||||||||| ||||||  ||||||||   ||||    
T  41663590 ttacaattttgacccatttcgtcccaaaattgctaagaagatgccacgtgtcccaaaaaaggggccataatcgcaattttttgagaaaataaagagtcaa 41663689  T
Q  635 acaa-catatttctcatatgtta-ggggttaaaagagcatattgccctaaacatggggt 691  Q
    | || |||||||| | ||||||| ||||| ||||||||||||| |||||||||||||||    
T  41663690 aaaatcatatttcccttatgttatggggtcaaaagagcatatttccctaaacatggggt 41663748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 543 - 686
Target Start/End: Original strand, 10293161 - 10293306
Alignment:
Q  543 tttgtcccctttcgtcccaaaattg-tgagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttgtaaaaataaaagttcaaacaacat 641  Q
    |||| ||| |||||||| |||| || |||||||||||||||||||| |||||||||  |||||||||||||||||| ||| ||||    ||||| |||||    
T  10293161 tttggcccatttcgtcctaaaaatgctgagaagacgccacatgtcttaaaaaagaggtcataatcgcaactttttggaaagataaggagtcaaaaaacat 10293260  T
Q  642 atttctcatatgttagg-ggttaaaagagcatattgccctaaacat 686  Q
    ||||| | ||||||||| ||| ||||||||||||| ||| ||||||    
T  10293261 atttcccttatgttaggaggtcaaaagagcatatttcccaaaacat 10293306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 541 - 686
Target Start/End: Original strand, 31055386 - 31055533
Alignment:
Q  541 attttgtcccctttcgtcccaaaattg-tgagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttgtaaaaataaaagttcaaacaac 639  Q
    |||||| |||||||| ||||||||||| | |||||| ||||| |||| || ||||| |  ||||||||||| |||||||||| ||||  | ||||| |||    
T  31055386 attttggcccctttcatcccaaaattgctcagaagatgccacgtgtcccagaaaaggggtcataatcgcaattttttgtaaagataaggggtcaaaaaac 31055485  T
Q  640 atatttctcatatgtt-aggggttaaaagagcatattgccctaaacat 686  Q
    ||||||| | |||||| |||||| ||||||||||||| ||||||||||    
T  31055486 atatttcccttatgttaaggggtcaaaagagcatatttccctaaacat 31055533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 572 - 691
Target Start/End: Complemental strand, 7187388 - 7187269
Alignment:
Q  572 aagacgccacatgtctcaaaaaagagaccataatcgcaactttttgtaaaaataaaagttcaaacaacatatttctcatatgttag-gggttaaaagagc 670  Q
    ||||||||||||||| |||||||| | | ||||||||||||||||||||||||||  | ||| | |||||||||| | |||||||| |||| ||||||      
T  7187388 aagacgccacatgtcccaaaaaagggtc-ataatcgcaactttttgtaaaaataattggtcataaaacatatttcccttatgttagagggtcaaaagaat 7187290  T
Q  671 atattgccctaaacatggggt 691  Q
    ||||| |||||||||||||||    
T  7187289 atatttccctaaacatggggt 7187269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 551 - 686
Target Start/End: Complemental strand, 7835931 - 7835795
Alignment:
Q  551 ctttcgtcccaaaattgt-gagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttgtaaaaataaaagttcaaacaacatatttctca 649  Q
    ||||| ||||||| |||| ||||||||||||||||||| ||||||  | |||||||| || || |||||||| ||||  | ||||| |||||||||  |     
T  7835931 ctttcatcccaaagttgttgagaagacgccacatgtctaaaaaaaagggccataatcccacctctttgtaaagataaggggtcaaaaaacatattttcct 7835832  T
Q  650 tatgttaggggttaaaagagcatattgccctaaacat 686  Q
    ||||||| |||| ||||||||||||| ||||||||||    
T  7835831 tatgttatgggtcaaaagagcatatttccctaaacat 7835795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 541 - 686
Target Start/End: Complemental strand, 36641375 - 36641228
Alignment:
Q  541 attttgtcccctttcgtcccaaaattg-tgagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttgtaaaaataaaagttcaaacaac 639  Q
    |||||| |||||||| ||  ||||||| |||||||||||||  |||| |||||||| || ||||||||||||||||| |||| ||||  | ||||| | |    
T  36641375 attttggcccctttcatcaaaaaattgctgagaagacgccatgtgtcccaaaaaagggatcataatcgcaactttttataaagataacgggtcaaaaagc 36641276  T
Q  640 atatttctcatatgttagg-ggttaaaagagcatattgccctaaacat 686  Q
    ||||||| | ||||||||| ||| ||||||||||||| | ||||||||    
T  36641275 atatttcccttatgttaggaggtcaaaagagcatatttctctaaacat 36641228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 552 - 689
Target Start/End: Original strand, 17704670 - 17704808
Alignment:
Q  552 tttcgtcccaaaattg-tgagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttgtaaaaataaaagttcaaacaacatatttctcat 650  Q
    |||||||||||||||| |||||| | ||||| | || |||||||| | |||||||  |||||||||||||| ||||| | ||||| |  ||||||| | |    
T  17704670 tttcgtcccaaaattgctgagaacatgccacttatcccaaaaaaggggccataatttcaactttttgtaaagataaagggtcaaaaagtatatttccctt 17704769  T
Q  651 atgttaggggttaaaagagcatattgccctaaacatggg 689  Q
    |||||| |||| |||||||||||||  ||||||||||||    
T  17704770 atgttatgggtcaaaagagcatattttcctaaacatggg 17704808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 541 - 686
Target Start/End: Original strand, 16307548 - 16307696
Alignment:
Q  541 attttgtcccctttcgtcccaaaattg-tgagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttgtaaaaataaaagttcaaacaac 639  Q
    |||||| |||||||| ||  ||||||| |||||||||||||||||||  ||||||| |  |||||| ||||||||||||||| ||||    ||||| |||    
T  16307548 attttggcccctttcatcttaaaattgctgagaagacgccacatgtccaaaaaaaggggtcataattgcaactttttgtaaagataaggagtcaaaaaac 16307647  T
Q  640 atatttctcatatgtta--ggggttaaaagagcatattgccctaaacat 686  Q
    ||||||  | |||||||  ||||| ||||||||||||| ||||||||||    
T  16307648 atattttccttatgttaggggggtcaaaagagcatatttccctaaacat 16307696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 549 - 686
Target Start/End: Complemental strand, 38408852 - 38408714
Alignment:
Q  549 ccctttcgtcccaaaattg-tgagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttgtaaaaataaaagttcaaacaacatatttct 647  Q
    ||||||| ||||||||||| | |||||| ||||| |||| || ||||  |  |||||| ||||||||||||||| ||||  | ||||| ||||||||||     
T  38408852 ccctttcatcccaaaattgctcagaagatgccacgtgtcccagaaaatgggtcataatagcaactttttgtaaagataaggggtcaaaaaacatatttcc 38408753  T
Q  648 catatgttaggggttaaaagagcatattgccctaaacat 686  Q
    | |||||||| ||| ||||||||||||| | ||||||||    
T  38408752 cttatgttagtggtcaaaagagcatatttctctaaacat 38408714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 541 - 683
Target Start/End: Original strand, 38476542 - 38476686
Alignment:
Q  541 attttgtcccctttcgtcccaaaattg-tgagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttgtaaaaataaaagttc-aaacaa 638  Q
    |||||| ||| |||||||||||||||| |||||||||||||| |||| |||||||| |  ||||||||||||||||||  || ||||  | || ||| |     
T  38476542 attttggcccatttcgtcccaaaattgctgagaagacgccacgtgtcccaaaaaag-ggtcataatcgcaactttttgagaagataaggggtcaaaagat 38476640  T
Q  639 catatttctcatatgtta-ggggttaaaagagcatattgccctaaa 683  Q
    |||||||| | ||||||| ||||| ||||||||||||| |||||||    
T  38476641 catatttcccttatgttatggggtcaaaagagcatatttccctaaa 38476686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 719 - 768
Target Start/End: Original strand, 31648238 - 31648288
Alignment:
Q  719 gccaaaatcgcaacattttgaaacatagggg-cgaaaagtgcagttgagcc 768  Q
    ||||||||||||||||||||||||||||||| |||||||||||||| ||||    
T  31648238 gccaaaatcgcaacattttgaaacataggggacgaaaagtgcagtttagcc 31648288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 719 - 768
Target Start/End: Complemental strand, 25556926 - 25556877
Alignment:
Q  719 gccaaaatcgcaacattttgaaacataggggcgaaaagtgcagttgagcc 768  Q
    |||||||| ||||||||||||||||||||||||| |||||||||| ||||    
T  25556926 gccaaaattgcaacattttgaaacataggggcgataagtgcagtttagcc 25556877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 541 - 675
Target Start/End: Complemental strand, 2373377 - 2373241
Alignment:
Q  541 attttgtcccctttcgtcccaaaattg-tgagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttgtaaaaataaaagttca-aacaa 638  Q
    |||||| ||||| |||||||||||||| | |||||||||||| |||| | |||||| |  ||||||||||| ||||||  |||||||  | ||| || |     
T  2373377 attttggcccctgtcgtcccaaaattgctaagaagacgccacgtgtccccaaaaaggggtcataatcgcaaatttttgagaaaataaggggtcataatat 2373278  T
Q  639 catatttctcatatgttaggggttaaaagagcatatt 675  Q
    |||||||| | ||||||| |||| |||||||||||||    
T  2373277 catatttcccttatgttatgggtcaaaagagcatatt 2373241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 721 - 768
Target Start/End: Complemental strand, 16901045 - 16900997
Alignment:
Q  721 caaaatcgcaacattttgaaacatagg-ggcgaaaagtgcagttgagcc 768  Q
    ||||||||||||||||||||||||||| |||||||||||||||| ||||    
T  16901045 caaaatcgcaacattttgaaacataggaggcgaaaagtgcagtttagcc 16900997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 543 - 687
Target Start/End: Complemental strand, 462996 - 462850
Alignment:
Q  543 tttgtcccctttcgtcccaaaattgt-gagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttgtaaaaataaaagttc-aaacaaca 640  Q
    |||| ||| ||| |||| |||||||| || |||||||||| ||||| |||||  ||  |||||||||||||||||||||| ||||  | || ||| ||||    
T  462996 tttggcccttttggtccaaaaattgttgaaaagacgccacgtgtctaaaaaagaaggtcataatcgcaactttttgtaaagataaggggtcaaaagaaca 462897  T
Q  641 tatttctcatatgttaggggttaaaagagcatattgccctaaacatg 687  Q
    |||||||| ||| |||  ||| ||||  ||||||| |||||||||||    
T  462896 tatttctcttatattataggtcaaaaaggcatatttccctaaacatg 462850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 719 - 768
Target Start/End: Complemental strand, 23765470 - 23765420
Alignment:
Q  719 gccaaaatcgcaacattttgaaacata-ggggcgaaaagtgcagttgagcc 768  Q
    |||||||| |||||||||||||||||| |||||||||||||||||| ||||    
T  23765470 gccaaaattgcaacattttgaaacatagggggcgaaaagtgcagtttagcc 23765420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 719 - 768
Target Start/End: Complemental strand, 23815318 - 23815268
Alignment:
Q  719 gccaaaatcgcaacattttgaaacata-ggggcgaaaagtgcagttgagcc 768  Q
    |||||||| |||||||||||||||||| |||||||||||||||||| ||||    
T  23815318 gccaaaattgcaacattttgaaacatagggggcgaaaagtgcagtttagcc 23815268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 551 - 686
Target Start/End: Original strand, 15885247 - 15885383
Alignment:
Q  551 ctttcgtcccaaaattg-tgagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttgtaaaaataaaagttcaaacaacatatttctca 649  Q
    |||||||  |||||||| |||||| || ||||||||| |||||||  ||||||||||| ||||||||||||| || || | ||||  |||||||||| |     
T  15885247 ctttcgtttcaaaattgctgagaaaacaccacatgtcccaaaaaaatgaccataatcgaaactttttgtaaagat-aagggtcaacaaacatatttccct 15885345  T
Q  650 tatgtt-aggggttaaaagagcatattgccctaaacat 686  Q
    |||||| || ||| ||||||| ||||| || |||||||    
T  15885346 tatgttaagaggtcaaaagagaatatttccataaacat 15885383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 720 - 760
Target Start/End: Complemental strand, 40428688 - 40428647
Alignment:
Q  720 ccaaaatcgcaacattttgaaacata-ggggcgaaaagtgca 760  Q
    |||||||||||||||||||||||||| |||||||||||||||    
T  40428688 ccaaaatcgcaacattttgaaacatagggggcgaaaagtgca 40428647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 639 - 687
Target Start/End: Complemental strand, 20653952 - 20653904
Alignment:
Q  639 catatttctcatatgttaggggttaaaagagcatattgccctaaacatg 687  Q
    |||||||| | |||||||||||| ||||||||||||| |||||||||||    
T  20653952 catatttcacttatgttaggggtcaaaagagcatatttccctaaacatg 20653904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 711 - 768
Target Start/End: Original strand, 7835954 - 7836012
Alignment:
Q  711 aataagaagccaaaatcgcaacattttgaaacat-aggggcgaaaagtgcagttgagcc 768  Q
    |||| |||||||||||||||| ||||| |||||| || |||||||||||||||| ||||    
T  7835954 aataggaagccaaaatcgcaatattttaaaacataagaggcgaaaagtgcagtttagcc 7836012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 719 - 760
Target Start/End: Original strand, 8646003 - 8646045
Alignment:
Q  719 gccaaaatcgcaacattttgaaacat-aggggcgaaaagtgca 760  Q
    ||||||||||||||||||| |||||| ||||||||||||||||    
T  8646003 gccaaaatcgcaacattttaaaacataaggggcgaaaagtgca 8646045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 719 - 760
Target Start/End: Original strand, 18695256 - 18695298
Alignment:
Q  719 gccaaaatcgcaacattttgaaacata-ggggcgaaaagtgca 760  Q
    ||||||||||||| ||||||||||||| |||||||||||||||    
T  18695256 gccaaaatcgcaatattttgaaacatagggggcgaaaagtgca 18695298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 719 - 768
Target Start/End: Original strand, 20654048 - 20654098
Alignment:
Q  719 gccaaaatcgcaacattttgaaacatagggg-cgaaaagtgcagttgagcc 768  Q
    ||||||||| |||||||||||||| |||||| |||||||||||||| ||||    
T  20654048 gccaaaatcacaacattttgaaacttaggggtcgaaaagtgcagtttagcc 20654098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 719 - 768
Target Start/End: Complemental strand, 31055365 - 31055315
Alignment:
Q  719 gccaaaatcgcaacattttgaaacata-ggggcgaaaagtgcagttgagcc 768  Q
    |||||||| |||||||| ||||||||| |||||||||||||||||| ||||    
T  31055365 gccaaaattgcaacattatgaaacatagggggcgaaaagtgcagtttagcc 31055315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 720 - 768
Target Start/End: Complemental strand, 31576542 - 31576493
Alignment:
Q  720 ccaaaatcgcaacattttgaaacatagggg-cgaaaagtgcagttgagcc 768  Q
    ||||||| ||||||||||||||| |||||| |||||||||||||| ||||    
T  31576542 ccaaaattgcaacattttgaaacttaggggtcgaaaagtgcagtttagcc 31576493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 68; Significance: 6e-30; HSPs: 38)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 541 - 686
Target Start/End: Original strand, 43793703 - 43793850
Alignment:
Q  541 attttgtcccctttcgtcccaaaattg-tgagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttgtaaaaataaaagttcaaacaac 639  Q
    |||||| ||| |||||||||||||||| ||||||||||||||||||| |||||||| |  |||| ||||||||||||||||| ||||  | ||||| |||    
T  43793703 attttggcccatttcgtcccaaaattgctgagaagacgccacatgtcccaaaaaaggggtcatattcgcaactttttgtaaatataaggggtcaaaaaac 43793802  T
Q  640 atatttctcatatgttagg-ggttaaaagagcatattgccctaaacat 686  Q
    ||||||| | ||||||||| ||| ||||||||||||| ||||||||||    
T  43793803 atatttcccttatgttaggaggtcaaaagagcatatttccctaaacat 43793850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 543 - 686
Target Start/End: Original strand, 15058892 - 15059037
Alignment:
Q  543 tttgtcccctttcgtcccaaaattg-tgagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttgtaaaaataaaagttcaaacaacat 641  Q
    |||| |||||||| ||||||||||| |||||||||||||| |||| |||||||| | | ||||||||||||||||||||| ||||  | ||||| | |||    
T  15058892 tttggcccctttcatcccaaaattgctgagaagacgccacgtgtcccaaaaaaggggctataatcgcaactttttgtaaagataaggggtcaaaaagcat 15058991  T
Q  642 atttctcatatgttagg-ggttaaaagagcatattgccctaaacat 686  Q
    ||||| | ||||||||| ||| ||||||||||||| ||||||||||    
T  15058992 atttcccttatgttaggaggtcaaaagagcatatttccctaaacat 15059037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 541 - 686
Target Start/End: Original strand, 13397747 - 13397894
Alignment:
Q  541 attttgtcccctttcgtcccaaaattg-tgagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttgtaaaaataaaagttcaaacaac 639  Q
    |||||| |||| ||| ||| ||||||| |||||||||||||| |||| |||||||| | ||||||||||||||||||||||| ||||  | ||||| | |    
T  13397747 attttggcccccttcatccgaaaattgctgagaagacgccacgtgtcccaaaaaaggggccataatcgcaactttttgtaaagataaggggtcaaaaagc 13397846  T
Q  640 atatttctcatatgttagg-ggttaaaagagcatattgccctaaacat 686  Q
    ||||||| | ||||||||| ||| ||||||||||||| ||||||||||    
T  13397847 atatttcccttatgttaggaggtcaaaagagcatatttccctaaacat 13397894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 541 - 686
Target Start/End: Original strand, 13826491 - 13826638
Alignment:
Q  541 attttgtcccctttcgtcccaaaattg-tgagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttgtaaaaataaaagttcaaacaac 639  Q
    |||||| |||||||| ||||||||||| |||||||||||||| |||| |||||||| | | ||||||||||||||||||||| ||||  | ||||| | |    
T  13826491 attttggcccctttcatcccaaaattgctgagaagacgccacgtgtcccaaaaaaggggctataatcgcaactttttgtaaagataaggggtcaaaaagc 13826590  T
Q  640 atatttctcatatgttagg-ggttaaaagagcatattgccctaaacat 686  Q
    ||||||| | ||||||||| ||| ||||||||||||| ||| ||||||    
T  13826591 atatttcccttatgttaggaggtcaaaagagcatatttcccgaaacat 13826638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 541 - 691
Target Start/End: Complemental strand, 35475521 - 35475369
Alignment:
Q  541 attttgtcccctttcgtcccaaaattg-tgagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttgtaaaaataaaagttcaaacaac 639  Q
    |||||| ||| |||| ||| ||||||| |||||||||||||| |||| |||||||| |  ||||||||| |||||||||||| ||||  | ||||| |||    
T  35475521 attttggcccatttcatcctaaaattgctgagaagacgccacgtgtcccaaaaaaggggtcataatcgctactttttgtaaagataaggggtcaaaaaac 35475422  T
Q  640 atatttctcatatgttagg-ggttaaaagagcatattgccctaaacatggggt 691  Q
    ||||||| | ||||||||| ||| ||||||||||||| |||||||||| ||||    
T  35475421 atatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggt 35475369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 541 - 686
Target Start/End: Complemental strand, 27018446 - 27018299
Alignment:
Q  541 attttgtcccctttcgtcccaaaattg-tgagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttgtaaaaataaaagttcaaacaac 639  Q
    |||||| ||| |||| ||||||||||| |||||||||||||| |||| |||||||| | ||||||| ||||||||||||||  ||||  | ||||| |||    
T  27018446 attttggcccatttcatcccaaaattgctgagaagacgccacgtgtcccaaaaaaggggccataattgcaactttttgtaaggataaggggtcaaaaaac 27018347  T
Q  640 atatttctcatatgtta-ggggttaaaagagcatattgccctaaacat 686  Q
    ||||||| | | ||||| ||||| ||||||||||||| ||||||||||    
T  27018346 atatttcccttttgttagggggtcaaaagagcatatttccctaaacat 27018299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 568 - 681
Target Start/End: Original strand, 2715817 - 2715930
Alignment:
Q  568 tgagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttgtaaaaataaaagttcaaacaacatatttctcatatgttaggggttaaaag 667  Q
    |||||||||||||| |||| |||||||  | ||||||||||||||||||||||| ||||  | ||||| | |||||||| |||||||||||||| |||||    
T  2715817 tgagaagacgccacgtgtcccaaaaaatgggccataatcgcaactttttgtaaagataaggggtcaaaaagcatatttcccatatgttaggggtcaaaag 2715916  T
Q  668 agcatattgcccta 681  Q
    | |||||| |||||    
T  2715917 atcatatttcccta 2715930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 590 - 686
Target Start/End: Original strand, 1588535 - 1588631
Alignment:
Q  590 aaaaagagaccataatcgcaactttttgtaaaaataaaagttcaaacaacatatttctcatatgttaggggttaaaagagcatattgccctaaacat 686  Q
    |||||||| | ||||||||||||||||||||| ||||  | ||||| |||||||||| | |||||||||||| ||||||||||||| ||||||||||    
T  1588535 aaaaagaggctataatcgcaactttttgtaaagataaggggtcaaaaaacatatttcccttatgttaggggtcaaaagagcatatttccctaaacat 1588631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 541 - 686
Target Start/End: Original strand, 5304419 - 5304566
Alignment:
Q  541 attttgtcccctttcgtcccaaaattg-tgagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttgtaaaaataaaagttcaaacaac 639  Q
    |||||| |||| ||| || |||||||| |||||||||||||| |||| |||||||  | ||||||||||||||||||||||| ||||  | ||||| | |    
T  5304419 attttggcccccttcatcgcaaaattgctgagaagacgccacgtgtcccaaaaaatgggccataatcgcaactttttgtaaagataaggggtcaaaaagc 5304518  T
Q  640 atatttctcatatgttagg-ggttaaaagagcatattgccctaaacat 686  Q
    ||||||  | ||||||||| ||| ||||||||||||| ||||||||||    
T  5304519 atattttccttatgttaggaggtcaaaagagcatatttccctaaacat 5304566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 568 - 675
Target Start/End: Complemental strand, 52838431 - 52838324
Alignment:
Q  568 tgagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttgtaaaaataaaagttcaaacaacatatttctcatatgttagg-ggttaaaa 666  Q
    |||||||||| ||| ||||||||||||| ||||||||||||||||||||||||| || || | ||||| | |||||||| | ||||||||| ||| ||||    
T  52838431 tgagaagacgacacgtgtctcaaaaaagggaccataatcgcaactttttgtaaagat-aagggtcaaaaagcatatttcccgtatgttaggaggtcaaaa 52838333  T
Q  667 gagcatatt 675  Q
    |||||||||    
T  52838332 gagcatatt 52838324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 541 - 686
Target Start/End: Complemental strand, 25011967 - 25011820
Alignment:
Q  541 attttgtcccctttcgtcccaaaattg-tgagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttgtaaaaataaaagttcaaacaac 639  Q
    |||||| |||||||| | ||||||||| | |||||| ||||| |||| |||||||| || ||||||| |||||||||||||| ||||  | ||||| |||    
T  25011967 attttggcccctttcattccaaaattgctcagaagatgccacgtgtcccaaaaaagggatcataatcccaactttttgtaaagataaggggtcaaaaaac 25011868  T
Q  640 atatttctcatatgtta-ggggttaaaagagcatattgccctaaacat 686  Q
    ||||  | | ||||||| ||||| ||||||||||||| ||||||||||    
T  25011867 atatcccccttatgttagggggtcaaaagagcatatttccctaaacat 25011820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 600 - 686
Target Start/End: Original strand, 9195796 - 9195882
Alignment:
Q  600 cataatcgcaactttttgtaaaaataaaagttcaaacaacatatttctcatatgttaggggttaaaagagcatattgccctaaacat 686  Q
    |||||||||||||||||||||| ||||  | ||||| |||||||||| | ||||||| |||| ||||||||||||| ||||||||||    
T  9195796 cataatcgcaactttttgtaaagataaggggtcaaaaaacatatttcccttatgttatgggtcaaaagagcatatttccctaaacat 9195882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 551 - 675
Target Start/End: Complemental strand, 15795539 - 15795413
Alignment:
Q  551 ctttcgtcccaaaattg-tgagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttgtaaaaataaaagttcaaacaacatatttctca 649  Q
    ||||||||||||||||| |||||||||||||||||||  ||||||  |  ||||||| |||||||||| ||| ||||||| ||||| | | |||||| |     
T  15795539 ctttcgtcccaaaattgatgagaagacgccacatgtcctaaaaaatgggtcataatcccaactttttgaaaagataaaaggtcaaaaagcctatttccct 15795440  T
Q  650 tatgttaggggtt-aaaagagcatatt 675  Q
    ||||||||| ||| |||||||||||||    
T  15795439 tatgttaggagttcaaaagagcatatt 15795413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 569 - 680
Target Start/End: Complemental strand, 41034839 - 41034727
Alignment:
Q  569 gagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttgtaaaaataaaagttcaaacaacatatttctcatatgttagg-ggttaaaag 667  Q
    ||||||||||||| |||  |||||||| ||| ||||||||||||||||||||||||||  | ||||| | |||||||| | ||||||||| ||| |||||    
T  41034839 gagaagacgccacgtgttccaaaaaagggactataatcgcaactttttgtaaaaataaggggtcaaaaagcatatttcccttatgttaggaggtcaaaag 41034740  T
Q  668 agcatattgccct 680  Q
    | |||||| ||||    
T  41034739 atcatatttccct 41034727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 552 - 687
Target Start/End: Original strand, 51291252 - 51291390
Alignment:
Q  552 tttcgtcccaaaattg-tgagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttgtaaaaataaaagttc-aaacaacatatttctca 649  Q
    ||||||| |||||||| ||||||||||||||||||| |||||||| | |||||||| ||||||||||  || ||||  | || ||| | |||||||| |     
T  51291252 tttcgtcacaaaattggtgagaagacgccacatgtcccaaaaaaggggccataatcacaactttttgagaagataaggggtcaaaagatcatatttccct 51291351  T
Q  650 tatgtta-ggggttaaaagagcatattgccctaaacatg 687  Q
    ||||||| ||||| |||||| |||||| |||||||||||    
T  51291352 tatgttagggggtcaaaagaacatatttccctaaacatg 51291390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 600 - 686
Target Start/End: Complemental strand, 55780558 - 55780472
Alignment:
Q  600 cataatcgcaactttttgtaaaaataaaagttcaaacaacatatttctcatatgttaggggttaaaagagcatattgccctaaacat 686  Q
    |||||||||||||||||||||| ||||  | ||||| |||||||||  | || ||||||||| ||||||||||||| ||||||||||    
T  55780558 cataatcgcaactttttgtaaagataaggggtcaaaaaacatattttccttaggttaggggtcaaaagagcatatttccctaaacat 55780472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 600 - 686
Target Start/End: Complemental strand, 55844738 - 55844652
Alignment:
Q  600 cataatcgcaactttttgtaaaaataaaagttcaaacaacatatttctcatatgttaggggttaaaagagcatattgccctaaacat 686  Q
    |||||||||||||||||||||| ||||  | ||||| |||||||||  | || ||||||||| ||||||||||||| ||||||||||    
T  55844738 cataatcgcaactttttgtaaagataaggggtcaaaaaacatattttccttaggttaggggtcaaaagagcatatttccctaaacat 55844652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 568 - 683
Target Start/End: Complemental strand, 4357456 - 4357340
Alignment:
Q  568 tgagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttgtaaaaataaaagttcaaacaacatatttctcatatgttag-gggttaaaa 666  Q
    |||||||||||||  |||| |||||||  | ||||||||||||||||||||||| ||||  | ||||| | |||||||| | ||||||||  ||| ||||    
T  4357456 tgagaagacgccaggtgtcccaaaaaaagggccataatcgcaactttttgtaaagataaggggtcaaaaagcatatttcccttatgttagaaggtcaaaa 4357357  T
Q  667 gagcatattgccctaaa 683  Q
    ||||||||| |||||||    
T  4357356 gagcatatttccctaaa 4357340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 541 - 686
Target Start/End: Original strand, 19232415 - 19232563
Alignment:
Q  541 attttgtcccctttcgtcccaaaattg-tgagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttgtaaaaataa-aagttcaaacaa 638  Q
    |||||| |||||||| ||||||||||| | |||||| ||||| |||| || ||||| |  |||||||||||||||||||||| ||||   ||  ||| ||    
T  19232415 attttggcccctttcatcccaaaattgctcagaagatgccacgtgtcccagaaaaggggtcataatcgcaactttttgtaaagataaggggtaaaaaaaa 19232514  T
Q  639 catatttctcatatgttaggg-gttaaaagagcatattgccctaaacat 686  Q
    |||||||  | |||||||||| || ||||||||||||| ||||||||||    
T  19232515 catattttccttatgttagggagtcaaaagagcatatttccctaaacat 19232563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 541 - 686
Target Start/End: Original strand, 6789030 - 6789177
Alignment:
Q  541 attttgtcccctttcgtcccaaaattg-tgagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttgtaaaaataaaagttcaaacaac 639  Q
    |||||| |||| ||| ||||||||||| | |||||||||||| |||| |||||||  |  ||||||||||| |||||||||| ||||  | ||||| |||    
T  6789030 attttggcccccttcatcccaaaattgctaagaagacgccacgtgtcccaaaaaaaggggcataatcgcaattttttgtaaagataacgggtcaaaaaac 6789129  T
Q  640 atatttctcatatgttagg-ggttaaaagagcatattgccctaaacat 686  Q
    || ||||||  |||||||| |||  ||| |||||||| ||||||||||    
T  6789130 atttttctctcatgttaggaggtcgaaacagcatatttccctaaacat 6789177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 548 - 686
Target Start/End: Complemental strand, 4098882 - 4098741
Alignment:
Q  548 cccctttcgtcccaaaattgt-gagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttgtaaaaataaaagttc-aaacaacatattt 645  Q
    ||||||||||||||||||||  ||||||||||||| |||| |||||||| | || |||| |||||||||||  || ||||  | || ||| | |||||||    
T  4098882 cccctttcgtcccaaaattgacgagaagacgccacgtgtcccaaaaaaggggccttaattgcaactttttgagaagataaggggtcaaaagatcatattt 4098783  T
Q  646 ctcatatgtta-ggggttaaaagagcatattgccctaaacat 686  Q
    | | ||||||| ||||| ||||||||||||| ||| ||||||    
T  4098782 cccttatgttagggggtcaaaagagcatatttcccaaaacat 4098741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 541 - 617
Target Start/End: Original strand, 36729160 - 36729237
Alignment:
Q  541 attttgtcccctttcgtcccaaaattg-tgagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttg 617  Q
    |||||| |||||||| ||||||||||  ||||||||||||||||||| ||||||| ||  |||||||| |||||||||    
T  36729160 attttggcccctttcatcccaaaattactgagaagacgccacatgtcccaaaaaaaaggtcataatcgaaactttttg 36729237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 541 - 686
Target Start/End: Original strand, 41877100 - 41877245
Alignment:
Q  541 attttgtcccctttcgtcccaaaattg-tgagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttgtaaaaataaaagttcaaacaac 639  Q
    |||||| |||||||| ||  ||||||| ||| |||||||||| ||||  ||||||| |  |||||||||||||||  ||||| ||||  | ||||| | |    
T  41877100 attttggcccctttcatcaaaaaattgctgaaaagacgccacgtgtcctaaaaaaggggtcataatcgcaacttt--gtaaagataaggggtcaaaaagc 41877197  T
Q  640 atatttctcatatgttagg-ggttaaaagagcatattgccctaaacat 686  Q
    ||||||| | ||||||||| ||| ||||||||||||| ||||||||||    
T  41877198 atatttcccttatgttaggaggtcaaaagagcatatttccctaaacat 41877245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 600 - 686
Target Start/End: Original strand, 4433315 - 4433402
Alignment:
Q  600 cataatcgcaactttttgtaaaaataaaagttcaaacaacatatttctcatatgtta-ggggttaaaagagcatattgccctaaacat 686  Q
    ||||||| |||||||||||||| ||||  | ||||| |||||||||  | ||||||| ||||| ||||||||||||| ||||||||||    
T  4433315 cataatcacaactttttgtaaagataaggggtcaaaaaacatattttccttatgttagggggtcaaaagagcatatttccctaaacat 4433402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 719 - 768
Target Start/End: Complemental strand, 4433233 - 4433183
Alignment:
Q  719 gccaaaatcgcaacattttgaaacata-ggggcgaaaagtgcagttgagcc 768  Q
    ||||||||||||||||| ||||||||| |||||||||||||||||| ||||    
T  4433233 gccaaaatcgcaacattatgaaacatagggggcgaaaagtgcagtttagcc 4433183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 719 - 768
Target Start/End: Complemental strand, 43793681 - 43793631
Alignment:
Q  719 gccaaaatcgcaacattttgaaacata-ggggcgaaaagtgcagttgagcc 768  Q
    ||||||||||||||||||| ||||||| |||||||||||||||||| ||||    
T  43793681 gccaaaatcgcaacattttaaaacatagggggcgaaaagtgcagtttagcc 43793631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 719 - 768
Target Start/End: Original strand, 4433436 - 4433485
Alignment:
Q  719 gccaaaatcgcaacattttgaaacataggggcgaaaagtgcagttgagcc 768  Q
    ||||||||||||||||||| |||| ||||||||||||||| |||| ||||    
T  4433436 gccaaaatcgcaacattttaaaacttaggggcgaaaagtgaagtttagcc 4433485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 543 - 689
Target Start/End: Complemental strand, 9397421 - 9397273
Alignment:
Q  543 tttgtcccctttcgtcccaaaattgt-gagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttgtaaaaataaaag-ttcaaacaaca 640  Q
    |||| ||||||| ||||||||||||| ||||| ||| ||| ||||  |||||| ||  ||||||  |||||||||||||| ||||| | || ||| ||||    
T  9397421 tttggcccctttagtcccaaaattgttgagaacacggcacgtgtccgaaaaaa-aggtcataatgacaactttttgtaaagataaagggttaaaaaaaca 9397323  T
Q  641 tatttctcatatgttag-gggttaaaagagcatattgccctaaacatggg 689  Q
    ||||||   |||||||| |||| ||||||||||||| ||||| |||||||    
T  9397322 tatttcctttatgttagagggtcaaaagagcatatttccctatacatggg 9397273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 720 - 768
Target Start/End: Complemental strand, 20919384 - 20919335
Alignment:
Q  720 ccaaaatcgcaacattttgaaacatagggg-cgaaaagtgcagttgagcc 768  Q
    ||||||||||||||||||||||| |||||| |||||||||||||| ||||    
T  20919384 ccaaaatcgcaacattttgaaacttaggggtcgaaaagtgcagtttagcc 20919335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 718 - 768
Target Start/End: Original strand, 41877277 - 41877328
Alignment:
Q  718 agccaaaatcgcaacattttgaaacatag-gggcgaaaagtgcagttgagcc 768  Q
    ||||||||||||||||||||||||| ||| |||||||||||| |||| ||||    
T  41877277 agccaaaatcgcaacattttgaaacttagagggcgaaaagtgaagtttagcc 41877328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 541 - 626
Target Start/End: Complemental strand, 14804551 - 14804465
Alignment:
Q  541 attttgtcccctttcgtcccaaaattgt-gagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttgtaaaaataa 626  Q
    |||||| || |||||||| ||||||||| ||||| ||||||  |||||||||||||| | ||||||| ||| ||||| |||| ||||    
T  14804551 attttggcctctttcgtctcaaaattgttgagaaaacgccatgtgtctcaaaaaagatatcataatcacaagtttttctaaagataa 14804465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 719 - 749
Target Start/End: Complemental strand, 15058870 - 15058840
Alignment:
Q  719 gccaaaatcgcaacattttgaaacatagggg 749  Q
    |||||||||||||||||||||||||||||||    
T  15058870 gccaaaatcgcaacattttgaaacatagggg 15058840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 719 - 768
Target Start/End: Complemental strand, 25011785 - 25011735
Alignment:
Q  719 gccaaaatcgcaacattttgaaacatagggg-cgaaaagtgcagttgagcc 768  Q
    |||||||||||||||||||||||| |||||| ||||||||| |||| ||||    
T  25011785 gccaaaatcgcaacattttgaaacttaggggacgaaaagtggagtttagcc 25011735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 719 - 768
Target Start/End: Original strand, 25011988 - 25012038
Alignment:
Q  719 gccaaaatcgcaacattttgaaacata-ggggcgaaaagtgcagttgagcc 768  Q
    |||||||| |||||||| ||||||||| |||||||||||||||||| ||||    
T  25011988 gccaaaattgcaacattatgaaacatagggggcgaaaagtgcagtttagcc 25012038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 549 - 626
Target Start/End: Original strand, 25618708 - 25618785
Alignment:
Q  549 ccctttcgtcccaaaattg-tgagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttgtaaaaataa 626  Q
    ||||||| ||| ||||||| |||||||||||||| |||| |||||| | | |||||||||| |||||||||||| ||||    
T  25618708 ccctttcatccaaaaattgctgagaagacgccacgtgtcccaaaaagggg-ccataatcgccactttttgtaaagataa 25618785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 719 - 760
Target Start/End: Complemental strand, 6979355 - 6979314
Alignment:
Q  719 gccaaaatcgcaacattttgaaacataggggcgaaaagtgca 760  Q
    |||||||||||||| |||||||||||||| | ||||||||||    
T  6979355 gccaaaatcgcaaccttttgaaacataggagtgaaaagtgca 6979314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 721 - 763
Target Start/End: Original strand, 27018470 - 27018514
Alignment:
Q  721 caaaatcgcaacattttgaaacata--ggggcgaaaagtgcagtt 763  Q
    |||||||||||||||||||||||||  ||||||| ||||||||||    
T  27018470 caaaatcgcaacattttgaaacataggggggcgagaagtgcagtt 27018514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 720 - 768
Target Start/End: Original strand, 35475543 - 35475592
Alignment:
Q  720 ccaaaatcgcaacattttgaaacatagggg-cgaaaagtgcagttgagcc 768  Q
    |||||||||||||||||| ||||||||||| | |||||||||||| ||||    
T  35475543 ccaaaatcgcaacattttaaaacataggggacaaaaagtgcagtttagcc 35475592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 68; Significance: 6e-30; HSPs: 58)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 541 - 686
Target Start/End: Original strand, 26628097 - 26628244
Alignment:
Q  541 attttgtcccctttcgtcccaaaattg-tgagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttgtaaaaataaaagttcaaacaac 639  Q
    |||||| |||||||| ||||||||||| |||||||||||||| |||| |||||||| | ||||||||||||||||||||||| ||||  | ||||| | |    
T  26628097 attttggcccctttcatcccaaaattgctgagaagacgccacgtgtcccaaaaaaggggccataatcgcaactttttgtaaagataaggggtcaaaaagc 26628196  T
Q  640 atatttctcatatgttagg-ggttaaaagagcatattgccctaaacat 686  Q
    ||||||| | ||||||||| ||| ||||||||||||| ||||||||||    
T  26628197 atatttcccttatgttaggaggtcaaaagagcatatttccctaaacat 26628244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 543 - 691
Target Start/End: Original strand, 26633433 - 26633582
Alignment:
Q  543 tttgtcccctttcgtcccaaaattgt-gagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttgtaaaaataaaagttcaaacaacat 641  Q
    |||| |||||||||||| |||||||  ||||||  ||||| || | |||||||| | ||||||||||||||||||||||| ||||  | ||||| |||||    
T  26633433 tttggcccctttcgtccaaaaattgccgagaaggtgccacgtgccccaaaaaaggggccataatcgcaactttttgtaaagataaggggtcaaaaaacat 26633532  T
Q  642 atttctcatatgttaggggttaaaagagcatattgccctaaacatggggt 691  Q
    ||||||| |||||||||||| ||||||||||||| ||||||| |||||||    
T  26633533 atttctcttatgttaggggtcaaaagagcatatttccctaaagatggggt 26633582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 541 - 686
Target Start/End: Original strand, 8339012 - 8339159
Alignment:
Q  541 attttgtcccctttcgtcccaaaattg-tgagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttgtaaaaataaaagttcaaacaac 639  Q
    |||||| |||| ||| ||||||||||| |||||||||||||| |||| |||||||||| ||||||||||||||||||||||| ||||  | ||||| | |    
T  8339012 attttggcccccttcatcccaaaattgctgagaagacgccacgtgtcccaaaaaagaggccataatcgcaactttttgtaaagataaggggtcaaaaagc 8339111  T
Q  640 atatttctcatatgttagg-ggttaaaagagcatattgccctaaacat 686  Q
    ||||||||  ||||||||| ||| |||| |||||||| ||||||||||    
T  8339112 atatttctattatgttaggaggtcaaaaaagcatatttccctaaacat 8339159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 541 - 686
Target Start/End: Original strand, 28154954 - 28155101
Alignment:
Q  541 attttgtcccctttcgtcccaaaattg-tgagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttgtaaaaataaaagttcaaacaac 639  Q
    |||||| |||||||| ||| ||||||| |||||||||||||| |||| |||||||  | ||||||||||||||||||||||| |||| || ||||| | |    
T  28154954 attttggcccctttcatccaaaaattgctgagaagacgccacgtgtcccaaaaaaagggccataatcgcaactttttgtaaagataagaggtcaaaaagc 28155053  T
Q  640 atatttctcatatgttagg-ggttaaaagagcatattgccctaaacat 686  Q
    ||||||| | ||||||||| ||| ||||||||||||| ||||||||||    
T  28155054 atatttcccttatgttaggaggtcaaaagagcatatttccctaaacat 28155101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 541 - 686
Target Start/End: Original strand, 48907364 - 48907511
Alignment:
Q  541 attttgtcccctttcgtcccaaaattg-tgagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttgtaaaaataaaagttcaaacaac 639  Q
    |||||| |||||||| ||||||||||| |||||||||||||| |||| |||||||| | |||||||||||||||||| |||| ||||  | ||||| | |    
T  48907364 attttggcccctttcatcccaaaattgctgagaagacgccacgtgtcccaaaaaaggggccataatcgcaactttttttaaagataaggggtcaaaaagc 48907463  T
Q  640 atatttctcatatgttagg-ggttaaaagagcatattgccctaaacat 686  Q
    ||||||| | ||||||||| ||| ||||||||||||| ||||||||||    
T  48907464 atatttcccttatgttaggaggtcaaaagagcatatttccctaaacat 48907511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 552 - 691
Target Start/End: Complemental strand, 3781099 - 3780959
Alignment:
Q  552 tttcgtcccaaaattg-tgagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttgtaaaaataaaagttcaaacaacatatttctcat 650  Q
    |||| ||| ||||||| ||||||||| |||| |||| |||||||| |  |||| ||||||||||||||||| ||||| | ||||| | |||||||| | |    
T  3781099 tttcatcctaaaattgctgagaagacaccacgtgtcccaaaaaaggggtcatattcgcaactttttgtaaagataaagggtcaaaaagcatatttccctt 3781000  T
Q  651 atgttaggggttaaaagagcatattgccctaaacatggggt 691  Q
    ||||||||||| ||||||||||||| |||||||||||||||    
T  3780999 atgttaggggtcaaaagagcatatttccctaaacatggggt 3780959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 541 - 686
Target Start/End: Complemental strand, 10743639 - 10743493
Alignment:
Q  541 attttgtcccctttcgtcccaaaattg-tgagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttgtaaaaataaaagttcaaacaac 639  Q
    |||||| |||||||| ||||||||||| | | |||| ||||| || | || ||||| |  |||||||||||||||||||||| ||||  | ||||| |||    
T  10743639 attttggcccctttcatcccaaaattgctcaaaagatgccacgtgacccagaaaaggggtcataatcgcaactttttgtaaagataaggggtcaaaaaac 10743540  T
Q  640 atatttctcatatgttaggggttaaaagagcatattgccctaaacat 686  Q
    ||||||| | |||||||||||||||||||||||||| ||||||||||    
T  10743539 atatttcccttatgttaggggttaaaagagcatatttccctaaacat 10743493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 541 - 684
Target Start/End: Original strand, 3328885 - 3329030
Alignment:
Q  541 attttgtcccctttcgtcccaaaattg-tgagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttgtaaaaataaaagttcaaacaac 639  Q
    |||||| |||||||| ||| ||||||| |||||||||||||| |||| |||||||| | ||||||||||||||||||||||| ||||  | |||||   |    
T  3328885 attttggcccctttcatccaaaaattgctgagaagacgccacgtgtcccaaaaaaggggccataatcgcaactttttgtaaagataaggggtcaaaaggc 3328984  T
Q  640 atatttctcatatgttagg-ggttaaaagagcatattgccctaaac 684  Q
    ||||||| | ||||||||| ||| ||||||||||||| ||||||||    
T  3328985 atatttcccttatgttaggaggtcaaaagagcatatttccctaaac 3329030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 541 - 683
Target Start/End: Complemental strand, 13081126 - 13080982
Alignment:
Q  541 attttgtcccctttcgtcccaaaattg-tgagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttgtaaaaataaaagttcaaacaac 639  Q
    |||||| |||| ||| ||||||||||| ||||||||| ||||||||| |||||||| | ||||||||||||||||||||||| ||||  | ||||| | |    
T  13081126 attttggcccccttcatcccaaaattgctgagaagactccacatgtcccaaaaaaggggccataatcgcaactttttgtaaagataaggggtcaaaaagc 13081027  T
Q  640 atatttctcatatgtta-ggggttaaaagagcatattgccctaaa 683  Q
    ||||||| | ||||||| | ||| ||||||||||||| |||||||    
T  13081026 atatttcccttatgttatgaggtcaaaagagcatatttccctaaa 13080982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 541 - 686
Target Start/End: Complemental strand, 4522186 - 4522039
Alignment:
Q  541 attttgtcccctttcgtcccaaaattg-tgagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttgtaaaaataaaagttcaaacaac 639  Q
    |||||| |||||||| ||| ||||||| |||||||||||||| |||| |||||||| | | ||||||||||||||||||||| ||||  | ||||| | |    
T  4522186 attttggcccctttcatcctaaaattgctgagaagacgccacgtgtcccaaaaaaggggcaataatcgcaactttttgtaaagataaggggtcaaaaagc 4522087  T
Q  640 atatttctcatatgtt-aggggttaaaagagcatattgccctaaacat 686  Q
    ||||||| | |||||| || ||| ||||||||||||| ||||||||||    
T  4522086 atatttcccttatgttaagaggtcaaaagagcatatttccctaaacat 4522039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 557 - 686
Target Start/End: Complemental strand, 8542826 - 8542695
Alignment:
Q  557 tcccaaaattg-tgagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttgtaaaaataaaagttcaaacaacatatttctcatatgtt 655  Q
    ||||||||||| |||||||||||||| |||| |||||||| | ||||||| ||||||||||||||| ||||  | ||||| | |||||||| | ||||||    
T  8542826 tcccaaaattgctgagaagacgccacgtgtcacaaaaaaggggccataattgcaactttttgtaaagataaggggtcaaaaagcatatttcccttatgtt 8542727  T
Q  656 agg-ggttaaaagagcatattgccctaaacat 686  Q
    ||| ||| ||||||||||||| ||||||||||    
T  8542726 aggaggtcaaaagagcatatttccctaaacat 8542695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 541 - 686
Target Start/End: Original strand, 23428691 - 23428838
Alignment:
Q  541 attttgtcccctttcgtcccaaaattg-tgagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttgtaaaaataaaagttcaaacaac 639  Q
    |||||| |||||||| ||||||||||| | |||||| ||||| |||| || ||||| |  |||||||||||||||||||||| ||||  | ||||| |||    
T  23428691 attttggcccctttcatcccaaaattgctcagaagatgccacgtgtcccagaaaaggggtcataatcgcaactttttgtaaagataaggggtcaaaaaac 23428790  T
Q  640 atatttctcatatgtta-ggggttaaaagagcatattgccctaaacat 686  Q
    ||||||| | ||||||| ||||| ||||||||||||| ||||||||||    
T  23428791 atatttcccttatgttagggggtcaaaagagcatatttccctaaacat 23428838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 541 - 686
Target Start/End: Original strand, 25022735 - 25022882
Alignment:
Q  541 attttgtcccctttcgtcccaaaattg-tgagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttgtaaaaataaaagttcaaacaac 639  Q
    |||||| |||||||| ||||||||||| | |||||| ||||| |||| || ||||| |  |||||||||||||||||||||| ||||  ||||||| |||    
T  25022735 attttggcccctttcatcccaaaattgctcagaagatgccacgtgtcccagaaaaggggtcataatcgcaactttttgtaaagataagggttcaaaaaac 25022834  T
Q  640 atatttctcatatgtta-ggggttaaaagagcatattgccctaaacat 686  Q
    |||| || | ||||||| ||||| ||||||||||||| ||||||||||    
T  25022835 atatatcccttatgttatggggtcaaaagagcatatttccctaaacat 25022882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 541 - 686
Target Start/End: Original strand, 30155217 - 30155364
Alignment:
Q  541 attttgtcccctttcgtcccaaaattg-tgagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttgtaaaaataaaagttcaaacaac 639  Q
    |||||| |||||||| ||  ||||||| || ||||||||||  |||| |||||||| | ||||||||||||||||||||||| ||||  | ||||| |||    
T  30155217 attttggcccctttcatcaaaaaattgctgcgaagacgccatgtgtcccaaaaaaggggccataatcgcaactttttgtaaagataaggggtcaaaaaac 30155316  T
Q  640 atatttctcatatgttagg-ggttaaaagagcatattgccctaaacat 686  Q
    ||||||| | ||||||||| ||| ||||||||||||| ||||||||||    
T  30155317 atatttcccttatgttaggaggtcaaaagagcatatttccctaaacat 30155364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 548 - 686
Target Start/End: Complemental strand, 25179801 - 25179663
Alignment:
Q  548 cccctttcgtcccaaaattg-tgagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttgtaaaaataaaagttcaaacaacatatttc 646  Q
    |||| ||| ||||||||||| ||||||||||||   |||| |||||||| | ||||||||||||||||||||||| ||||  | ||||| ||||||||||    
T  25179801 cccccttcatcccaaaattgctgagaagacgccg--tgtcccaaaaaaggggccataatcgcaactttttgtaaagataaggggtcaaaaaacatatttc 25179704  T
Q  647 tcatatgttagg-ggttaaaagagcatattgccctaaacat 686  Q
    || || |||||| ||| ||||||||||||| ||||||||||    
T  25179703 tcttacgttaggaggtcaaaagagcatatttccctaaacat 25179663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 552 - 691
Target Start/End: Original strand, 26177039 - 26177180
Alignment:
Q  552 tttcgtcccaaaattg-tgagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttgtaaaaataaaagttcaaacaacatatttctcat 650  Q
    |||||||||||||||| |||||||| |||||| ||| |||||||||| ||||||||||||||||||||||| ||||     |||| | |||||||| | |    
T  26177039 tttcgtcccaaaattgctgagaagaagccacaagtcccaaaaaagaggccataatcgcaactttttgtaaagataatgagccaaaaagcatatttcccct 26177138  T
Q  651 atgttag-gggttaaaagagcatattgccctaaacatggggt 691  Q
    ||||||| |||| |||| |||||||| |||| ||||||||||    
T  26177139 atgttagagggtcaaaatagcatatttccctgaacatggggt 26177180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 548 - 686
Target Start/End: Original strand, 22500674 - 22500814
Alignment:
Q  548 cccctttcgtcccaaaattg-tgagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttgtaaaaataaaagttcaaacaacatatttc 646  Q
    |||||||| ||| ||||||  |||||||||||||| ||||  ||||||| ||||||||||||||||||||||||| ||||  | ||||| | ||||||||    
T  22500674 cccctttcatccaaaaatttctgagaagacgccacgtgtccaaaaaaagggaccataatcgcaactttttgtaaatataagggatcaaaaagcatatttc 22500773  T
Q  647 tcatatgttagg-ggttaaaagagcatattgccctaaacat 686  Q
     | ||||||||| ||| |||||||||||||  |||||||||    
T  22500774 ccttatgttaggaggtcaaaagagcatattttcctaaacat 22500814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 553 - 691
Target Start/End: Original strand, 26126990 - 26127130
Alignment:
Q  553 ttcgtcccaaaattg-tgagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttgtaaaaataaaagttcaaacaacatatttctcata 651  Q
    |||||| |||||||| ||||||||||||||| |||  ||||||||| ||||||||||||||||||||||| ||||  |  |||| | |||||||| | ||    
T  26126990 ttcgtcgcaaaattgctgagaagacgccacaagtccaaaaaaagaggccataatcgcaactttttgtaaagataaggggccaaaaagcatatttccccta 26127089  T
Q  652 tgttag-gggttaaaagagcatattgccctaaacatggggt 691  Q
    |||||| |||| |||| | |||||| |||||||||||||||    
T  26127090 tgttagagggtcaaaataacatatttccctaaacatggggt 26127130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 536 - 689
Target Start/End: Complemental strand, 23320597 - 23320443
Alignment:
Q  536 ttacgattttgtcccctttcgtcccaaaattg-tgagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttgtaaaaataa-aagttca 633  Q
    |||| |||||| |||||||||||||||||||| ||| ||||||||||||||| | |||||| | ||||||| |||||||||||  || |||| ||||  |    
T  23320597 ttacaattttggcccctttcgtcccaaaattgctgaaaagacgccacatgtc-ccaaaaaggggccataatagcaactttttgagaagataagaagtcaa 23320499  T
Q  634 aacaacatatttctcatatgttaggggttaaaagagcatattgccctaaacatggg 689  Q
     | | || | ||||| |||||||||||| ||||||||||||| |||||||||||||    
T  23320498 tatatcagacttctcttatgttaggggtcaaaagagcatatttccctaaacatggg 23320443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 541 - 686
Target Start/End: Original strand, 27852824 - 27852970
Alignment:
Q  541 attttgtcccctttcgtcccaaaattgt-gagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttgtaaaaataaaagttcaaacaac 639  Q
    |||||| |||| |||  ||||||||||| ||||||||||||| |||| |||||| | | ||||||||||||||||||||||| ||||  | ||||| | |    
T  27852824 attttggcccccttcagcccaaaattgttgagaagacgccacgtgtcccaaaaagggg-ccataatcgcaactttttgtaaagataaggggtcaaaaagc 27852922  T
Q  640 atatttctcatatgttagg-ggttaaaagagcatattgccctaaacat 686  Q
    ||||||| | ||||||||| ||| ||||||||||||| ||||||||||    
T  27852923 atatttcccttatgttaggaggtcaaaagagcatatttccctaaacat 27852970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 541 - 686
Target Start/End: Original strand, 28173801 - 28173948
Alignment:
Q  541 attttgtcccctttcgtcccaaaattg-tgagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttgtaaaaataaaagttcaaacaac 639  Q
    |||||| |||||||| ||||||||||| |  ||||| ||||| |||| || ||||| |  |||||||||||||||||||||| ||||  | ||||| |||    
T  28173801 attttggcccctttcatcccaaaattgctcggaagatgccacgtgtcccagaaaaggggtcataatcgcaactttttgtaaagataaggggtcaaaaaac 28173900  T
Q  640 atatttctcatatgtta-ggggttaaaagagcatattgccctaaacat 686  Q
    ||||||| | ||||||| ||||| ||||||||||||| ||||||||||    
T  28173901 atatttcccttatgttagggggtcaaaagagcatatttccctaaacat 28173948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 539 - 691
Target Start/End: Original strand, 40836248 - 40836403
Alignment:
Q  539 cgattttgtcccctttcgtcccaaaattg-tgagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttgt-aaaaataaaagttcaaac 636  Q
    |||||||| |||||||||| ||||||||| ||||||| |||||| |||| |||||||| | |||||||||||||||||| | | | ||||  | |||||     
T  40836248 cgattttggcccctttcgttccaaaattgctgagaagccgccacgtgtcccaaaaaaggggccataatcgcaactttttttgagatataaggggtcaaaa 40836347  T
Q  637 aacatatttctcatatgtta-ggggttaaaagagcatattgccctaaacatggggt 691  Q
    |||||||||| | ||| ||| ||||| |||||| |||||| |||||||||||||||    
T  40836348 aacatatttcccttatattagggggtcaaaagaacatatttccctaaacatggggt 40836403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 527 - 626
Target Start/End: Original strand, 20626780 - 20626880
Alignment:
Q  527 ttcaaaatgttacgattttgtcccctttcgtcccaaaattg-tgagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttgtaaaaata 625  Q
    |||||||||||||||||||| |||||||||  ||||||||| | ||||||||||||||||| ||||||||    |||||||| ||||||||||||| |||    
T  20626780 ttcaaaatgttacgattttggcccctttcgctccaaaattgttaagaagacgccacatgtcccaaaaaaggagtcataatcgtaactttttgtaaagata 20626879  T
Q  626 a 626  Q
    |    
T  20626880 a 20626880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 541 - 626
Target Start/End: Original strand, 32960715 - 32960800
Alignment:
Q  541 attttgtcccctttcgtcccaaaattg-tgagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttgtaaaaataa 626  Q
    |||||| |||||||| ||||||||||  |||||||||||||| |||| ||||||| || ||||||||||||||||||||||| ||||    
T  32960715 attttggcccctttcatcccaaaattactgagaagacgccacgtgtcccaaaaaa-aggccataatcgcaactttttgtaaagataa 32960800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 541 - 684
Target Start/End: Original strand, 34878601 - 34878746
Alignment:
Q  541 attttgtcccctttcgtcccaaaattg-tgagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttgtaaaaataaaagttcaaacaac 639  Q
    |||||| ||| |||| || |||||||| |||||||||||||| |||| ||||||||   ||||||| | ||||||||||||| ||||  | ||||| | |    
T  34878601 attttgacccatttcatctcaaaattgctgagaagacgccacgtgtcccaaaaaaggtgccataattgaaactttttgtaaagataagggatcaaaaagc 34878700  T
Q  640 atatttctcatatgtta-ggggttaaaagagcatattgccctaaac 684  Q
    ||||||| | ||| ||| ||||| ||||||||||||| ||||||||    
T  34878701 atatttcccttatattagggggtcaaaagagcatatttccctaaac 34878746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 541 - 686
Target Start/End: Original strand, 46673119 - 46673266
Alignment:
Q  541 attttgtcccctttcgtcccaaaattg-tgagaagacgccacatgtctcaaaaaagagaccataatcgcaacttttt-gtaaaaataaaagttcaaacaa 638  Q
    |||||| |||||||| ||||||||||| | |||||| ||||| ||||  | ||||| |  ||||||||||||||||| ||||| ||||  | ||||| ||    
T  46673119 attttggcccctttcatcccaaaattgctcagaagatgccacgtgtcctagaaaaggggtcataatcgcaacttttttgtaaagataaggggtcaaa-aa 46673217  T
Q  639 catatttctcatatgttaggg-gttaaaagagcatattgccctaaacat 686  Q
    |||||||| | |||||||||| || ||||||||||||| ||||||||||    
T  46673218 catatttcccttatgttagggagtcaaaagagcatatttccctaaacat 46673266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 548 - 646
Target Start/End: Complemental strand, 6927695 - 6927596
Alignment:
Q  548 cccctttcgtcccaaaattg-tgagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttgtaaaaataaaagttcaaacaacatatttc 646  Q
    |||||||| ||||||||||| | |||||| ||||| |||| |||||||| |  |||||||||||||||||||||| ||||  | ||||| ||||||||||    
T  6927695 cccctttcatcccaaaattgctcagaagatgccacgtgtcccaaaaaaggggtcataatcgcaactttttgtaaagataaggggtcaaaaaacatatttc 6927596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 560 - 626
Target Start/End: Complemental strand, 43668641 - 43668574
Alignment:
Q  560 caaaattg-tgagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttgtaaaaataa 626  Q
    |||||||| ||||||||||||||||||| ||||| || |  |||||||||||||||||||||||||||    
T  43668641 caaaattgctgagaagacgccacatgtcccaaaacaggggtcataatcgcaactttttgtaaaaataa 43668574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 541 - 626
Target Start/End: Complemental strand, 22416566 - 22416480
Alignment:
Q  541 attttgtcccctttcgtcccaaaattgt-gagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttgtaaaaataa 626  Q
    |||||| |||| |||||||||||||||| ||||||||||||| |||| |||| ||| |  |||||| ||||||||||||||| ||||    
T  22416566 attttggcccccttcgtcccaaaattgttgagaagacgccacgtgtcccaaataaggggtcataattgcaactttttgtaaagataa 22416480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 719 - 768
Target Start/End: Original strand, 20001962 - 20002011
Alignment:
Q  719 gccaaaatcgcaacattttgaaacataggggcgaaaagtgcagttgagcc 768  Q
    |||||||||||||||||||||||| |||||| ||||||||||||| ||||    
T  20001962 gccaaaatcgcaacattttgaaacttaggggagaaaagtgcagtttagcc 20002011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 541 - 672
Target Start/End: Original strand, 31039049 - 31039182
Alignment:
Q  541 attttgtcccctttcgtcccaaaattg-tgagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttgtaaaaataaaagttca-aacaa 638  Q
    |||||| || ||||||||| ||||||| ||||||||||||||||||   ||||||| | | ||||||||||||||||   || ||||| | |||  | |     
T  31039049 attttggcctctttcgtccaaaaattgctgagaagacgccacatgttctaaaaaaggggctataatcgcaactttttaagaagataaagggtcattagat 31039148  T
Q  639 catatttctcatatgttaggggttaaaagagcat 672  Q
    |||||||| |||||||||||||| ||||||||||    
T  31039149 catatttcccatatgttaggggtcaaaagagcat 31039182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 552 - 627
Target Start/End: Complemental strand, 3821103 - 3821027
Alignment:
Q  552 tttcgtcccaaaattg-tgagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttgtaaaaataaa 627  Q
    |||| ||| ||||||| ||||||||| ||||||||| |||||||| |  |||||||||||||||||||||| |||||    
T  3821103 tttcatcctaaaattgctgagaagacaccacatgtcccaaaaaaggggtcataatcgcaactttttgtaaagataaa 3821027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 591 - 686
Target Start/End: Complemental strand, 48860883 - 48860787
Alignment:
Q  591 aaaagagaccataatcgcaactttttgtaaaaataaaagttcaaacaacatatttctcatatgttag-gggttaaaagagcatattgccctaaacat 686  Q
    ||||| || |||||||||||||||||||||| ||||  | ||||| |||||||||| | ||||||||  ||| |||| |||||||| ||||||||||    
T  48860883 aaaagggatcataatcgcaactttttgtaaagataaggggtcaaaaaacatatttcccttatgttagaaggtcaaaatagcatatttccctaaacat 48860787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 721 - 768
Target Start/End: Complemental strand, 26633408 - 26633361
Alignment:
Q  721 caaaatcgcaacattttgaaacataggggcgaaaagtgcagttgagcc 768  Q
    ||||||||||||||||| |||| |||||||||||||||||||| ||||    
T  26633408 caaaatcgcaacattttaaaacttaggggcgaaaagtgcagtttagcc 26633361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 541 - 685
Target Start/End: Original strand, 33279657 - 33279803
Alignment:
Q  541 attttgtcccctttcgtcccaaaattg-tgagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttgtaaaaataaaagttcaaacaa- 638  Q
    |||||| ||||||| |||| ||||||| |||||||||||||| ||||||||||||  |  |||||||| ||||||| ||||| ||||  | |||||  |     
T  33279657 attttgacccctttggtccaaaaattgctgagaagacgccacgtgtctcaaaaaaagggtcataatcgtaactttt-gtaaatataagggatcaaaagag 33279755  T
Q  639 catatttctcatatgttaggggtt-aaaagagcatattgccctaaaca 685  Q
    |||||||| | ||||||||||| | |||||||||||||  ||||||||    
T  33279756 catatttcccttatgttagggggtcaaaagagcatattttcctaaaca 33279803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 719 - 768
Target Start/End: Complemental strand, 22447790 - 22447740
Alignment:
Q  719 gccaaaatcgcaacattttgaaacata-ggggcgaaaagtgcagttgagcc 768  Q
    |||||||| |||||||||||||||||| |||||||||||||||||| ||||    
T  22447790 gccaaaattgcaacattttgaaacatagggggcgaaaagtgcagtttagcc 22447740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 568 - 686
Target Start/End: Original strand, 22447840 - 22447963
Alignment:
Q  568 tgagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttgtaa----aaataaaagttcaaacaacatatttctcatatgttagg-ggtt 662  Q
    |||||||||||||| | ||  ||||||| | ||||||||||||||||||||||    | ||||  | ||||| | |||||||| | ||||||||| |||     
T  22447840 tgagaagacgccacgtatccaaaaaaaggggccataatcgcaactttttgtaaagatatataaggggtcaaaaagcatatttcccttatgttaggaggtc 22447939  T
Q  663 aaaagagcatattgccctaaacat 686  Q
    ||||||||||||| ||||||||||    
T  22447940 aaaagagcatatttccctaaacat 22447963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 719 - 768
Target Start/End: Complemental strand, 34878579 - 34878529
Alignment:
Q  719 gccaaaatcgcaacattttgaaacata-ggggcgaaaagtgcagttgagcc 768  Q
    ||||||||||||||||||||||||||| ||||||| |||||||||| ||||    
T  34878579 gccaaaatcgcaacattttgaaacatagggggcgagaagtgcagtttagcc 34878529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 721 - 760
Target Start/End: Complemental strand, 8338988 - 8338948
Alignment:
Q  721 caaaatcgcaacattttgaaacata-ggggcgaaaagtgca 760  Q
    ||||||||||||||||||||||||| |||||||||||||||    
T  8338988 caaaatcgcaacattttgaaacatagggggcgaaaagtgca 8338948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 718 - 768
Target Start/End: Complemental strand, 13080945 - 13080894
Alignment:
Q  718 agccaaaatcgcaacattttgaaacatag-gggcgaaaagtgcagttgagcc 768  Q
    ||||||||||||||||||||||||| ||| |||||||||||| |||| ||||    
T  13080945 agccaaaatcgcaacattttgaaacttagagggcgaaaagtgaagtttagcc 13080894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 541 - 686
Target Start/End: Complemental strand, 20001941 - 20001794
Alignment:
Q  541 attttgtcccctttcgtcccaaaattgt-gagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttgtaaaaataaaagttcaaacaac 639  Q
    |||||| ||| |||| |||||||||||| ||||||||||||| |||  ||||| || | ||||| |||||||||||||  || ||||  |   | | | |    
T  20001941 attttgccccttttcatcccaaaattgttgagaagacgccacgtgttccaaaacaggggccatagtcgcaactttttgagaatataaggggcaagagatc 20001842  T
Q  640 atatttctcatatgtta-ggggttaaaagagcatattgccctaaacat 686  Q
    ||||||| | ||||||| ||||| ||||||||||||| ||||||||||    
T  20001841 atatttcccttatgttagggggtcaaaagagcatatttccctaaacat 20001794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 719 - 768
Target Start/End: Complemental strand, 3328863 - 3328813
Alignment:
Q  719 gccaaaatcgcaacattttgaaacata-ggggcgaaaagtgcagttgagcc 768  Q
    |||||||| | |||||||||||||||| |||||||||||||||||| ||||    
T  3328863 gccaaaattgtaacattttgaaacatagggggcgaaaagtgcagtttagcc 3328813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 719 - 768
Target Start/End: Original strand, 3329067 - 3329117
Alignment:
Q  719 gccaaaatcgcaacattttgaaacatag-gggcgaaaagtgcagttgagcc 768  Q
    |||||||||||||||||||||||| ||| |||||||||||| |||| ||||    
T  3329067 gccaaaatcgcaacattttgaaacttagagggcgaaaagtgaagtttagcc 3329117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 719 - 756
Target Start/End: Original strand, 13081148 - 13081186
Alignment:
Q  719 gccaaaatcgcaacattttgaaacatagg-ggcgaaaag 756  Q
    ||||||||||||||||||||||||||||| |||||||||    
T  13081148 gccaaaatcgcaacattttgaaacataggaggcgaaaag 13081186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 719 - 768
Target Start/End: Complemental strand, 22500646 - 22500596
Alignment:
Q  719 gccaaaatcgcaacattttgaaacatagggg-cgaaaagtgcagttgagcc 768  Q
    |||||||| |||| ||||||||||||||||| |||||||||||||| ||||    
T  22500646 gccaaaattgcaatattttgaaacataggggccgaaaagtgcagtttagcc 22500596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 719 - 760
Target Start/End: Original strand, 25179829 - 25179871
Alignment:
Q  719 gccaaaatcgcaacattttgaaacata-ggggcgaaaagtgca 760  Q
    ||||| ||||||||||||||||||||| |||||||||||||||    
T  25179829 gccaatatcgcaacattttgaaacatagggggcgaaaagtgca 25179871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 711 - 768
Target Start/End: Complemental strand, 25336416 - 25336358
Alignment:
Q  711 aataagaagccaaaatcgcaacattttgaaacat-aggggcgaaaagtgcagttgagcc 768  Q
    ||||||| |||||||| ||||||||||||||  | ||||||||||||||||||| ||||    
T  25336416 aataagaggccaaaattgcaacattttgaaatttaaggggcgaaaagtgcagtttagcc 25336358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 719 - 768
Target Start/End: Complemental strand, 26628075 - 26628025
Alignment:
Q  719 gccaaaatcgcaacattttgaaacata-ggggcgaaaagtgcagttgagcc 768  Q
    |||||||| |||||||||||||||||| ||||||||||||| |||| ||||    
T  26628075 gccaaaattgcaacattttgaaacatagggggcgaaaagtgtagtttagcc 26628025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 719 - 768
Target Start/End: Complemental strand, 28154932 - 28154882
Alignment:
Q  719 gccaaaatcgcaacattttgaaacata-ggggcgaaaagtgcagttgagcc 768  Q
    |||||||| |||||||||||||||||| ||||||||||||| |||| ||||    
T  28154932 gccaaaattgcaacattttgaaacatagggggcgaaaagtgtagtttagcc 28154882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 719 - 760
Target Start/End: Complemental strand, 28173779 - 28173737
Alignment:
Q  719 gccaaaatcgcaacattttgaaacata-ggggcgaaaagtgca 760  Q
    ||||||||||||||||| ||||||||| |||||||||||||||    
T  28173779 gccaaaatcgcaacattatgaaacatagggggcgaaaagtgca 28173737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 719 - 768
Target Start/End: Complemental strand, 32960695 - 32960645
Alignment:
Q  719 gccaaaatcgcaacattttgaaacata-ggggcgaaaagtgcagttgagcc 768  Q
    |||||||| |||||||||||||||||| |||||||||| ||||||| ||||    
T  32960695 gccaaaattgcaacattttgaaacatagggggcgaaaaatgcagtttagcc 32960645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 719 - 768
Target Start/End: Complemental strand, 36311202 - 36311152
Alignment:
Q  719 gccaaaatcgcaacattttgaaacatagggg-cgaaaagtgcagttgagcc 768  Q
    ||||||||||||||||||| |||| |||||| |||||||||||||| ||||    
T  36311202 gccaaaatcgcaacattttaaaacttaggggacgaaaagtgcagtttagcc 36311152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 719 - 768
Target Start/End: Original strand, 48907545 - 48907595
Alignment:
Q  719 gccaaaatcgcaacattttgaaacatag-gggcgaaaagtgcagttgagcc 768  Q
    |||||||||||||||||||||||| ||| |||||||||||| |||| ||||    
T  48907545 gccaaaatcgcaacattttgaaacttagagggcgaaaagtgaagtttagcc 48907595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 720 - 768
Target Start/End: Original strand, 1743504 - 1743553
Alignment:
Q  720 ccaaaatcgcaacattttgaaacataggg-gcgaaaagtgcagttgagcc 768  Q
    |||||||||||||||||| |||| ||||| ||||||||||||||| ||||    
T  1743504 ccaaaatcgcaacattttaaaacttagggagcgaaaagtgcagtttagcc 1743553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 550 - 586
Target Start/End: Complemental strand, 32315142 - 32315105
Alignment:
Q  550 cctttcgtcccaaaattgt-gagaagacgccacatgtc 586  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  32315142 cctttcgtcccaaaattgttgagaagacgccacatgtc 32315105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 637 - 690
Target Start/End: Complemental strand, 33105075 - 33105022
Alignment:
Q  637 aacatatttctcatatgttaggggttaaaagagcatattgccctaaacatgggg 690  Q
    |||||||||||| |||| ||| | | ||||||||||||| ||||||||||||||    
T  33105075 aacatatttctcttatgatagagatcaaaagagcatatttccctaaacatgggg 33105022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 541 - 617
Target Start/End: Complemental strand, 36311383 - 36311306
Alignment:
Q  541 attttgtcccctttcgtcccaaaattg-tgagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttg 617  Q
    |||||| |||||||||||||||||||| |||||||| ||||| |||| ||||| |  | || ||||||||||| ||||    
T  36311383 attttggcccctttcgtcccaaaattgttgagaagaagccacgtgtcccaaaatatgggccgtaatcgcaactatttg 36311306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 722 - 763
Target Start/End: Complemental strand, 49657811 - 49657770
Alignment:
Q  722 aaaatcgcaacattttgaaacataggggcgaaaagtgcagtt 763  Q
    |||||| |||||||||||||| |||||| |||||||||||||    
T  49657811 aaaatcacaacattttgaaacgtaggggtgaaaagtgcagtt 49657770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 68; Significance: 6e-30; HSPs: 27)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 541 - 686
Target Start/End: Complemental strand, 38716425 - 38716278
Alignment:
Q  541 attttgtcccctttcgtcccaaaattg-tgagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttgtaaaaataaaagttcaaacaac 639  Q
    |||||| |||||||| ||| ||||||| |||||||||||||| |||| |||||||| | ||||||||||||||||||||||| ||||  | ||||| | |    
T  38716425 attttggcccctttcatccaaaaattgctgagaagacgccacgtgtcccaaaaaaggggccataatcgcaactttttgtaaagataaggggtcaaaaagc 38716326  T
Q  640 atatttctcatatgttagg-ggttaaaagagcatattgccctaaacat 686  Q
    ||||||||| ||||||||| ||| ||||||||||||| ||||||||||    
T  38716325 atatttctcttatgttaggaggtcaaaagagcatatttccctaaacat 38716278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 541 - 686
Target Start/End: Original strand, 30714346 - 30714493
Alignment:
Q  541 attttgtcccctttcgtcccaaaattg-tgagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttgtaaaaataaaagttcaaacaac 639  Q
    |||||| |||||||| ||||||||||| ||||||||||||||||||| |||||||| | |||||||| |||||||||||||| ||||  | ||||| | |    
T  30714346 attttggcccctttcatcccaaaattgctgagaagacgccacatgtcccaaaaaaggggccataatcacaactttttgtaaagataacgggtcaaaaagc 30714445  T
Q  640 atatttctcatatgttagg-ggttaaaagagcatattgccctaaacat 686  Q
    ||||||| | ||||||||| ||| ||||||||||||| ||| ||||||    
T  30714446 atatttcccttatgttaggaggtcaaaagagcatatttcccgaaacat 30714493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 549 - 686
Target Start/End: Complemental strand, 11176131 - 11175992
Alignment:
Q  549 ccctttcgtcccaaaattg-tgagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttgtaaaaataaaagttcaaacaacatatttct 647  Q
    ||||||| ||||||||||| |||||||||||||| |||| |||||||| | |||||||| |||||||||||||| ||||  | ||||| | ||||||||     
T  11176131 ccctttcatcccaaaattgctgagaagacgccacgtgtcccaaaaaaggggccataatcacaactttttgtaaagataaggggtcaaaaagcatatttcc 11176032  T
Q  648 catatgttagg-ggttaaaagagcatattgccctaaacat 686  Q
    | ||||||||| ||| ||||||||||||| ||||||||||    
T  11176031 cttatgttaggaggtcaaaagagcatatttccctaaacat 11175992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 541 - 686
Target Start/End: Complemental strand, 15735296 - 15735149
Alignment:
Q  541 attttgtcccctttcgtcccaaaattgt-gagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttgtaaaaataaaagttcaaacaac 639  Q
    |||||| |||||||| |||||||||||| ||||||||||||| |||| |||||||| | ||||||||||||||||||||||| ||||  | |||||  ||    
T  15735296 attttggcccctttcatcccaaaattgttgagaagacgccacgtgtcccaaaaaaggggccataatcgcaactttttgtaaagataaggggtcaaaatac 15735197  T
Q  640 atatttctcatatgtta-ggggttaaaagagcatattgccctaaacat 686  Q
    ||||||| | ||||||| | ||| ||||||||||||| ||| ||||||    
T  15735196 atatttcccttatgttacgaggtcaaaagagcatatttcccaaaacat 15735149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 541 - 686
Target Start/End: Complemental strand, 2986918 - 2986771
Alignment:
Q  541 attttgtcccctttcgtcccaaaattg-tgagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttgtaaaaataaaagttcaaacaac 639  Q
    |||||| |||| ||| ||||||||||| |||||||||||||  ||||  ||||||| | ||||||||||||||||||||||| ||||  | ||||| | |    
T  2986918 attttggcccccttcatcccaaaattgctgagaagacgccatgtgtccaaaaaaaggggccataatcgcaactttttgtaaagataaggggtcaaaaagc 2986819  T
Q  640 atatttctcatatgttagg-ggttaaaagagcatattgccctaaacat 686  Q
    ||||||| | ||||||||| ||| ||||||||||||| ||||||||||    
T  2986818 atatttcccttatgttaggaggtcaaaagagcatatttccctaaacat 2986771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 541 - 686
Target Start/End: Original strand, 9051100 - 9051246
Alignment:
Q  541 attttgtcccctttcgtcccaaaattg-tgagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttgtaaaaataaaagttcaaacaac 639  Q
    |||||| |||| ||| || |||||||| |||||||||||| | |||| |||||||| | ||||||||||||||||||||||| |||| || ||||| | |    
T  9051100 attttggcccccttcatctcaaaattgctgagaagacgccccgtgtcccaaaaaaggg-ccataatcgcaactttttgtaaagataagaggtcaaaaagc 9051198  T
Q  640 atatttctcatatgttagg-ggttaaaagagcatattgccctaaacat 686  Q
    ||||||| | ||||||||| ||| ||||||||||||| ||||||||||    
T  9051199 atatttcccttatgttaggaggtcaaaagagcatatttccctaaacat 9051246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 541 - 686
Target Start/End: Complemental strand, 9787791 - 9787644
Alignment:
Q  541 attttgtcccctttcgtcccaaaattg-tgagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttgtaaaaataaaagttcaaacaac 639  Q
    |||||| |||||||| ||| ||||||| |||||||||||||| |||| |||||||| | ||||||||| ||||||||||||| ||||  | ||||| | |    
T  9787791 attttggcccctttcatccaaaaattgctgagaagacgccacgtgtcccaaaaaaggggccataatcgtaactttttgtaaagataaggggtcaaaaagc 9787692  T
Q  640 atatttctcatatgttag-gggttaaaagagcatattgccctaaacat 686  Q
    ||||||| | ||||||||  ||| ||||||||||||| ||||||||||    
T  9787691 atatttcccttatgttagcaggtcaaaagagcatatttccctaaacat 9787644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 543 - 687
Target Start/End: Original strand, 22387141 - 22387288
Alignment:
Q  543 tttgtcccctttcgtcccaaaattg-tgagaagacgccacatgtctcaaaaaagaga-ccataatcgcaactttttgtaaaaataaaagttcaaacaaca 640  Q
    |||| ||||||||||| |||||||| |||||||||||||| |||| |||||||| |  |||||||| ||||| |||||| | ||||  | ||||| ||||    
T  22387141 tttgacccctttcgtctcaaaattgctgagaagacgccacttgtcccaaaaaagggggccataatcacaactctttgtatagataaggggtcaaaaaaca 22387240  T
Q  641 tatttctcatatgtta-ggggttaaaagagcatattgccctaaacatg 687  Q
    |||||||||||||||| ||||| ||||||||||||| | |||||||||    
T  22387241 tatttctcatatgttagggggtcaaaagagcatatttcactaaacatg 22387288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 541 - 686
Target Start/End: Original strand, 25298873 - 25299020
Alignment:
Q  541 attttgtcccctttcgtcccaaaattgt-gagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttgtaaaaataaaagttcaaacaac 639  Q
    |||||| |||| ||| |||||||||||| ||||||| ||||| |||| |||||||| | ||||||||||||||||||||||| ||||  | ||||| |||    
T  25298873 attttggcccccttcatcccaaaattgttgagaagatgccacgtgtcccaaaaaaggggccataatcgcaactttttgtaaagataagggatcaaaaaac 25298972  T
Q  640 atatttctcatatgtt-aggggttaaaagagcatattgccctaaacat 686  Q
    |||||||   |||||| || ||| ||||||||||||| ||||||||||    
T  25298973 atatttcctttatgttaagaggtcaaaagagcatatttccctaaacat 25299020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 541 - 686
Target Start/End: Complemental strand, 15700979 - 15700832
Alignment:
Q  541 attttgtcccctttcgtcccaaaattg-tgagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttgtaaaaataaaagttcaaacaac 639  Q
    |||||| |||||||| ||||||||||| | |||||| ||||| |||| || ||||| |  |||||||||||||||||||||| ||||  | ||||| |||    
T  15700979 attttggcccctttcatcccaaaattgctcagaagatgccacgtgtcccagaaaaggggtcataatcgcaactttttgtaaagataaggggtcaaaaaac 15700880  T
Q  640 atatttctcatatgtta-ggggttaaaagagcatattgccctaaacat 686  Q
    ||||||| | ||||||| ||||| ||||||||||||| ||| ||||||    
T  15700879 atatttcccttatgttagggggtcaaaagagcatatttcccgaaacat 15700832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 557 - 686
Target Start/End: Original strand, 6763805 - 6763936
Alignment:
Q  557 tcccaaaattg-tgagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttgtaaaaataaaagttcaaacaacatatttctcatatgtt 655  Q
    ||||||||||| |||||||||||||| |||| |||||||| | || ||||||| |||||||||||| ||||  | ||||| | |||||||  | ||||||    
T  6763805 tcccaaaattgctgagaagacgccacgtgtcccaaaaaaggggccgtaatcgctactttttgtaaagataaggggtcaaaaagcatattttccttatgtt 6763904  T
Q  656 agg-ggttaaaagagcatattgccctaaacat 686  Q
    ||| ||| ||||||||||||| ||||||||||    
T  6763905 aggaggtcaaaagagcatatttccctaaacat 6763936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 541 - 686
Target Start/End: Original strand, 18537900 - 18538047
Alignment:
Q  541 attttgtcccctttcgtcccaaaattg-tgagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttgtaaaaataaaagttcaaacaac 639  Q
    |||||| |||||||| ||| ||||||| |||||||||||||| |||| |||||||| | ||||||| ||||||||||||||| ||||  | ||||| | |    
T  18537900 attttggcccctttcatccaaaaattgctgagaagacgccacgtgtcccaaaaaaggggccataattgcaactttttgtaaagataaggggtcaaaaagc 18537999  T
Q  640 atatttctcatatgtta-ggggttaaaagagcatattgccctaaacat 686  Q
    ||||||| |  |||||| | ||| |||| |||||||| ||||||||||    
T  18538000 atatttccctaatgttatgaggtcaaaaaagcatatttccctaaacat 18538047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 541 - 673
Target Start/End: Complemental strand, 17368448 - 17368314
Alignment:
Q  541 attttgtcccctttcgtcccaaaattgt-gagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttgtaaaaataaaagttcaaacaac 639  Q
    |||||| |||||||| ||| |||| ||| ||||||||||||| |||| |||||||| | ||||||| ||||||||||||||| ||||  | ||||| | |    
T  17368448 attttggcccctttcatccaaaaaatgttgagaagacgccacgtgtcccaaaaaaggggccataattgcaactttttgtaaagataaggggtcaaaaagc 17368349  T
Q  640 atatttctcatatgttagg-ggttaaaagagcata 673  Q
    ||||||| | ||||||||| ||| |||||||||||    
T  17368348 atatttcccttatgttaggaggtcaaaagagcata 17368314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 541 - 686
Target Start/End: Complemental strand, 22191277 - 22191131
Alignment:
Q  541 attttgtcccctttcgtcccaaaattg-tgagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttgtaaaaataaaagttcaaacaac 639  Q
    |||||| |||||||| ||||||||||| ||||||| |||||| |||| |||||||| | | ||||||| ||||||||||||| ||||  | |||||   |    
T  22191277 attttggcccctttcatcccaaaattgctgagaaggcgccacgtgtcccaaaaaagggtc-ataatcgtaactttttgtaaagataaggggtcaaaaggc 22191179  T
Q  640 atatttctcatatgttaggg-gttaaaagagcatattgccctaaacat 686  Q
    ||||||| | |||||||||  || ||||||||||||| ||||||||||    
T  22191178 atatttcccttatgttaggaagtcaaaagagcatatttccctaaacat 22191131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 600 - 686
Target Start/End: Complemental strand, 4588033 - 4587946
Alignment:
Q  600 cataatcgcaactttttgtaaaaataaaagttcaaacaacatatttctcatatgtta-ggggttaaaagagcatattgccctaaacat 686  Q
    |||||||||||||||||||||| ||||  | | ||| |||||||||| | ||||||| ||||| ||||||||||||| ||||||||||    
T  4588033 cataatcgcaactttttgtaaagataaggggttaaaaaacatatttcccttatgttagggggtcaaaagagcatatttccctaaacat 4587946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 541 - 626
Target Start/End: Original strand, 4104896 - 4104982
Alignment:
Q  541 attttgtcccctttcgtcccaaaattg-tgagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttgtaaaaataa 626  Q
    |||||| ||| |||||||||||||||| |||||||||||||| |||  | |||||| |  |||||||||||||||||||||| ||||    
T  4104896 attttgacccatttcgtcccaaaattgctgagaagacgccacgtgttcctaaaaaggggtcataatcgcaactttttgtaaatataa 4104982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 541 - 683
Target Start/End: Complemental strand, 28365742 - 28365598
Alignment:
Q  541 attttgtcccctttcgtcccaaaattg-tgagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttgtaaaaataa-aagttcaaacaa 638  Q
    |||||| |||||||||||||||||||| |||||||||||||   ||| |||||||  |  ||||||||||||||||||  || ||||   ||| ||| |     
T  28365742 attttgccccctttcgtcccaaaattgctgagaagacgccatgcgtcccaaaaaaagggtcataatcgcaactttttgagaagataaggggttaaaagat 28365643  T
Q  639 catatttctcatatgttaggggttaaaagagcatattgccctaaa 683  Q
    |||||||| |  ||||||||||| ||| ||||||||| |||||||    
T  28365642 catatttccctcatgttaggggtcaaacgagcatatttccctaaa 28365598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 721 - 763
Target Start/End: Original strand, 36464527 - 36464570
Alignment:
Q  721 caaaatcgcaacattttgaaacatagg-ggcgaaaagtgcagtt 763  Q
    |||||||||||||||||||||| |||| ||||||||||||||||    
T  36464527 caaaatcgcaacattttgaaacttaggaggcgaaaagtgcagtt 36464570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 600 - 688
Target Start/End: Complemental strand, 331885 - 331795
Alignment:
Q  600 cataatcgcaactttttgtaaaaataaaagttcaaacaa-catatttctcatatgttag-gggttaaaagagcatattgccctaaacatgg 688  Q
    |||||||||||||||||| ||| ||||  | ||||| || |||||||| | || ||||| |||| ||||||||||||| ||||||||||||    
T  331885 cataatcgcaactttttgcaaagataatggatcaaaaaagcatatttcccttaagttagagggtcaaaagagcatatttccctaaacatgg 331795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 719 - 768
Target Start/End: Complemental strand, 11175957 - 11175907
Alignment:
Q  719 gccaaaatcgcaacattttgaaacatag-gggcgaaaagtgcagttgagcc 768  Q
    |||||||||||||||||||||||| ||| |||||||||||| |||| ||||    
T  11175957 gccaaaatcgcaacattttgaaacttagagggcgaaaagtgaagtttagcc 11175907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 719 - 768
Target Start/End: Original strand, 18538082 - 18538132
Alignment:
Q  719 gccaaaatcgcaacattttgaaacatag-gggcgaaaagtgcagttgagcc 768  Q
    |||||||||||||||||||||||| ||| |||||||||||| |||| ||||    
T  18538082 gccaaaatcgcaacattttgaaacttagagggcgaaaagtgaagtttagcc 18538132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 719 - 760
Target Start/End: Complemental strand, 25298851 - 25298809
Alignment:
Q  719 gccaaaatcgcaacattttgaaacata-ggggcgaaaagtgca 760  Q
    ||||||||||||||||||| ||||||| |||||||||||||||    
T  25298851 gccaaaatcgcaacattttaaaacatagggggcgaaaagtgca 25298809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 719 - 760
Target Start/End: Complemental strand, 30714325 - 30714283
Alignment:
Q  719 gccaaaatcgcaacattttgaaacata-ggggcgaaaagtgca 760  Q
    ||||||||||||||||||| ||||||| |||||||||||||||    
T  30714325 gccaaaatcgcaacattttaaaacatagggggcgaaaagtgca 30714283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 548 - 617
Target Start/End: Complemental strand, 12350236 - 12350164
Alignment:
Q  548 cccctttcgtcccaaaattg-tgagaagacgccacatgtctcaaaaaagagacca--taatcgcaactttttg 617  Q
    ||||||||||| |||||||  ||| ||||||||||||||  ||||||||||| ||  ||||||||||||||||    
T  12350236 cccctttcgtctcaaaattactgacaagacgccacatgttccaaaaaagagatcatttaatcgcaactttttg 12350164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 720 - 768
Target Start/End: Complemental strand, 15735113 - 15735064
Alignment:
Q  720 ccaaaatcgcaacattttgaaacatag-gggcgaaaagtgcagttgagcc 768  Q
    ||||||||||||||||||||||| ||| |||||||||||| |||| ||||    
T  15735113 ccaaaatcgcaacattttgaaacttagagggcgaaaagtgaagtttagcc 15735064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 720 - 768
Target Start/End: Complemental strand, 18537878 - 18537829
Alignment:
Q  720 ccaaaatcgcaacattttgaaacatagggg-cgaaaagtgcagttgagcc 768  Q
    ||||||| |||||||||| ||||||||||| |||||||||||||| ||||    
T  18537878 ccaaaattgcaacattttaaaacataggggacgaaaagtgcagtttagcc 18537829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 720 - 761
Target Start/End: Original strand, 28365765 - 28365806
Alignment:
Q  720 ccaaaatcgcaacattttgaaacataggggcgaaaagtgcag 761  Q
    ||||||| ||||||||||||||| ||||| ||||||||||||    
T  28365765 ccaaaattgcaacattttgaaacttagggtcgaaaagtgcag 28365806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 67; Significance: 2e-29; HSPs: 2)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 541 - 686
Target Start/End: Complemental strand, 19514 - 19368
Alignment:
Q  541 attttgtcccctttcgtcccaaaattg-tgagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttgtaaaaataaaagttcaaacaac 639  Q
    |||||| ||| |||| ||| ||||||| |||||||||||||| |||| |||||||| | ||||||||||||||||||||||| ||||  | ||||| | |    
T  19514 attttggcccatttcatccaaaaattgctgagaagacgccacgtgtcccaaaaaaggggccataatcgcaactttttgtaaagataaggggtcaaaaagc 19415  T
Q  640 atatttctcatatgttaggggttaaaagagcatattgccctaaacat 686  Q
    ||||||| | |||||||||||| ||||||||||||| ||||||||||    
T  19414 atatttcccttatgttaggggtcaaaagagcatatttccctaaacat 19368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 541 - 686
Target Start/End: Complemental strand, 62048 - 61899
Alignment:
Q  541 attttgtcccctttcgtcccaaaattgt-gagaagacgccacatgtctcaaaaaagaga--ccataatcgcaactttttgtaaaaataaaagttcaaaca 637  Q
    |||||| |||||||| ||| |||||||| ||||||||||||| |||| ||||||| ||   ||||||| ||||||||||||||| ||||  | ||||| |    
T  62048 attttggcccctttcatccaaaaattgttgagaagacgccacgtgtcccaaaaaaaaggggccataattgcaactttttgtaaagataaggggtcaaaaa 61949  T
Q  638 acatatttctcatatgttagg-ggttaaaagagcatattgccctaaacat 686  Q
     |||||||| | |||||||||  || ||||||||||||| ||||||||||    
T  61948 gcatatttcccttatgttaggatgtcaaaagagcatatttccctaaacat 61899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 64; Significance: 1e-27; HSPs: 56)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 541 - 686
Target Start/End: Original strand, 19195285 - 19195432
Alignment:
Q  541 attttgtcccctttcgtcccaaaattgt-gagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttgtaaaaataaaagttcaaacaac 639  Q
    |||||| |||||||| ||| |||||||| |||||||||||||||||| |||||||| | |||||||| |||||||||||||| ||||  | ||||| |||    
T  19195285 attttggcccctttcatccaaaaattgttgagaagacgccacatgtcccaaaaaaggggccataatcacaactttttgtaaagataaggggtcaaaaaac 19195384  T
Q  640 atatttctcatatgttagg-ggttaaaagagcatattgccctaaacat 686  Q
    ||||||| | ||||||||| ||| |||||||| |||| ||||||||||    
T  19195385 atatttcccttatgttaggaggtcaaaagagcgtatttccctaaacat 19195432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 541 - 686
Target Start/End: Original strand, 21224424 - 21224571
Alignment:
Q  541 attttgtcccctttcgtcccaaaattg-tgagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttgtaaaaataaaagttcaaacaac 639  Q
    |||||| |||||||| ||| ||||||| |||||||||||||| ||||||||||||  | ||||||||||||||||||||||| ||||  | ||||| | |    
T  21224424 attttggcccctttcatccaaaaattgctgagaagacgccacgtgtctcaaaaaaagggccataatcgcaactttttgtaaagataaggggtcaaaaagc 21224523  T
Q  640 atatttctcatatgttagg-ggttaaaagagcatattgccctaaacat 686  Q
    ||||||| | ||||||||| ||| ||||||||||||| ||||||||||    
T  21224524 atatttcccttatgttaggaggtcaaaagagcatatttccctaaacat 21224571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 541 - 686
Target Start/End: Original strand, 48176035 - 48176181
Alignment:
Q  541 attttgtcccctttcgtcccaaaattg-tgagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttgtaaaaataaaagttcaaacaac 639  Q
    |||||| |||||||| ||||||||||| | |||||| ||||| |||| || ||||| |  |||||||||||||||||||||| ||||  | ||||| |||    
T  48176035 attttggcccctttcatcccaaaattgctcagaagatgccacgtgtcccagaaaaggggtcataatcgcaactttttgtaaagataaggggtcaaaaaac 48176134  T
Q  640 atatttctcatatgttaggggttaaaagagcatattgccctaaacat 686  Q
    ||||||| | |||||||||||| ||||||||||||| ||||||||||    
T  48176135 atatttcccttatgttaggggtcaaaagagcatatttccctaaacat 48176181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 557 - 686
Target Start/End: Original strand, 24597603 - 24597734
Alignment:
Q  557 tcccaaaattg-tgagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttgtaaaaataaaagttcaaacaacatatttctcatatgtt 655  Q
    ||||||||||| |||||||||||||| ||||||||| ||| | ||||||||||||||||||||||| | ||  | ||||| |||||||||| | ||||||    
T  24597603 tcccaaaattgctgagaagacgccacgtgtctcaaacaaggggccataatcgcaactttttgtaaagagaaggggtcaaaaaacatatttcccttatgtt 24597702  T
Q  656 agg-ggttaaaagagcatattgccctaaacat 686  Q
    ||| ||| ||||||||||||| ||||||||||    
T  24597703 aggaggtcaaaagagcatatttccctaaacat 24597734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 541 - 686
Target Start/End: Original strand, 36746575 - 36746722
Alignment:
Q  541 attttgtcccctttcgtcccaaaattgt-gagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttgtaaaaataaaagttcaaacaac 639  Q
    |||||| |||||||| |||||||||||| ||||||||||||| |||| |||||||| |  |||||||||||||||||||||| ||||  | | |||   |    
T  36746575 attttggcccctttcatcccaaaattgttgagaagacgccacgtgtcccaaaaaaggggtcataatcgcaactttttgtaaagataaggggttaaaaggc 36746674  T
Q  640 atatttctcatatgttagg-ggttaaaagagcatattgccctaaacat 686  Q
    ||||||||| ||||||||| ||| ||||||||||||| ||||||||||    
T  36746675 atatttctcttatgttaggaggtcaaaagagcatatttccctaaacat 36746722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 541 - 686
Target Start/End: Original strand, 13577858 - 13578004
Alignment:
Q  541 attttgtcccctttcgtcccaaaattg-tgagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttgtaaaaataaaagttcaaacaac 639  Q
    |||||| |||||||| ||||||||||| |||||||||||||| |||  |||||||| | |||||||  |||||||||||| | ||||| | ||||| | |    
T  13577858 attttggcccctttcatcccaaaattgctgagaagacgccacgtgttccaaaaaaggggccataatttcaactttttgtatagataaagggtcaaaaagc 13577957  T
Q  640 atatttctcatatgttaggggttaaaagagcatattgccctaaacat 686  Q
    ||||||| | |||||||||||| ||||||||||||| || |||||||    
T  13577958 atatttcccttatgttaggggtcaaaagagcatatttccttaaacat 13578004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 543 - 686
Target Start/End: Complemental strand, 2331243 - 2331098
Alignment:
Q  543 tttgtcccctttcgtcccaaaattg-tgagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttgtaaaaataaaagttcaaacaacat 641  Q
    |||| |||||||| ||| ||||||| |||||||||||||| |||| ||||||| || ||||||||||||||||||||||| ||||    ||||| | |||    
T  2331243 tttggcccctttcatccaaaaattgctgagaagacgccacttgtcccaaaaaataggccataatcgcaactttttgtaaagataaggagtcaaaaagcat 2331144  T
Q  642 atttctcatatgttagg-ggttaaaagagcatattgccctaaacat 686  Q
    ||||| | ||||||||| ||| ||||||||||||| ||||||||||    
T  2331143 atttcccttatgttaggaggtcaaaagagcatatttccctaaacat 2331098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 557 - 686
Target Start/End: Original strand, 27869283 - 27869414
Alignment:
Q  557 tcccaaaattg-tgagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttgtaaaaataaaagttcaaacaacatatttctcatatgtt 655  Q
    ||||||||||| |||||||||||||  |||| |||||||| | ||||||||||||||||||||||| ||||  | ||||| | |||||||| | ||||||    
T  27869283 tcccaaaattgctgagaagacgccatgtgtcccaaaaaaggggccataatcgcaactttttgtaaagataaggggtcaaaaagcatatttcccttatgtt 27869382  T
Q  656 agg-ggttaaaagagcatattgccctaaacat 686  Q
    ||| ||| ||||||||||||| ||||||||||    
T  27869383 aggaggtcaaaagagcatatttccctaaacat 27869414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 541 - 686
Target Start/End: Complemental strand, 31494142 - 31493995
Alignment:
Q  541 attttgtcccctttcgtcccaaaattg-tgagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttgtaaaaataaaagttcaaacaac 639  Q
    |||||| |||||||| ||| ||||||| |||||||||||||| |||  |||||||| | ||||||||||||||||||||||| ||||  | ||||| | |    
T  31494142 attttggcccctttcatcctaaaattgctgagaagacgccacgtgttccaaaaaaggggccataatcgcaactttttgtaaagataaggggtcaaaaagc 31494043  T
Q  640 atatttctcatatgttag-gggttaaaagagcatattgccctaaacat 686  Q
    ||||||  | |||||||| |||| ||||||||||||| ||||||||||    
T  31494042 atattttccttatgttagagggtcaaaagagcatatttccctaaacat 31493995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 540 - 687
Target Start/End: Original strand, 44077941 - 44078091
Alignment:
Q  540 gattttgtcccctttcgtcccaaaattg-tgagaagacgccacatgtctcaaaaaagagaccataatcgcaacttttt-gtaaaaataaaagttcaaaca 637  Q
    |||||||  ||||||||||||||||||| | |||||||||||  |||| |||||| ||   ||||||||||||||||| ||||| ||||  | ||||| |    
T  44077941 gattttggtccctttcgtcccaaaattgctaagaagacgccatgtgtcccaaaaaggatgtcataatcgcaacttttttgtaaagataaggggtcaaaaa 44078040  T
Q  638 acatatttctcatatgttagg-ggttaaaagagcatattgccctaaacatg 687  Q
    ||||||||||| ||||||||| ||| ||||||||||||| |||||||||||    
T  44078041 acatatttctcttatgttaggaggtcaaaagagcatatttccctaaacatg 44078091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 543 - 694
Target Start/End: Complemental strand, 14624832 - 14624680
Alignment:
Q  543 tttgtcccctttcgtcccaaaattg-tgagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttgtaaaaataaaagttcaaacaacat 641  Q
    |||| ||| ||| |||||||||||| |||||| | ||||| |||| |||||||| | ||||||| ||||||||||||||| ||||| | ||||| |  ||    
T  14624832 tttgacccattttgtcccaaaattgctgagaacatgccacgtgtcccaaaaaaggggccataattgcaactttttgtaaagataaagggtcaaaaagtat 14624733  T
Q  642 atttctcatatgttaggggttaaaagagcatattgccctaaacatggggttac 694  Q
    ||||| | ||||||| |||| |||||||||||||  ||||||||| |||||||    
T  14624732 atttcccttatgttatgggtcaaaagagcatattttcctaaacattgggttac 14624680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 549 - 686
Target Start/End: Complemental strand, 17305989 - 17305849
Alignment:
Q  549 ccctttcgtcccaaaattg-tgagaagacgccacatgtctcaaaaaagagac-cataatcgcaactttttgtaaaaataaaagttcaaacaacatatttc 646  Q
    ||||||| ||||||||||| ||||||||||||||||||| |||||||| |   ||||||| |||||||||||||||||||  | ||||| | ||||||||    
T  17305989 ccctttcatcccaaaattgatgagaagacgccacatgtcccaaaaaagggggtcataatcacaactttttgtaaaaataaggggtcaaaaagcatatttc 17305890  T
Q  647 tcatatgttagg-ggttaaaagagcatattgccctaaacat 686  Q
     | ||||||||| ||| |||||||||||||  |||||||||    
T  17305889 ccttatgttaggaggtcaaaagagcatattttcctaaacat 17305849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 568 - 686
Target Start/End: Original strand, 3562533 - 3562652
Alignment:
Q  568 tgagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttgtaaaaataaaagttcaaacaacatatttctcatatgttagg-ggttaaaa 666  Q
    |||||||||||||| ||||  ||||||| | ||||||||||||||||||||||| ||||  | ||||| | |||||||| | ||||||||| ||| ||||    
T  3562533 tgagaagacgccacgtgtcctaaaaaaggggccataatcgcaactttttgtaaagataaggggtcaaaaagcatatttcccttatgttaggaggtcaaaa 3562632  T
Q  667 gagcatattgccctaaacat 686  Q
    ||||||||| ||||||||||    
T  3562633 gagcatatttccctaaacat 3562652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 557 - 686
Target Start/End: Complemental strand, 20636835 - 20636704
Alignment:
Q  557 tcccaaaattg-tgagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttgtaaaaataaaagttcaaacaacatatttctcatatgtt 655  Q
    ||||||||||| |||||| ||||||| |||| |||||||| |  |||||||||||||||||||||| ||||  | ||||| | |||||||| | ||||||    
T  20636835 tcccaaaattgctgagaaaacgccacgtgtcccaaaaaaggggtcataatcgcaactttttgtaaagataaggggtcaaaaagcatatttcccttatgtt 20636736  T
Q  656 agg-ggttaaaagagcatattgccctaaacat 686  Q
    ||| ||| ||||||||||||| ||||||||||    
T  20636735 aggaggtcaaaagagcatatttccctaaacat 20636704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 568 - 686
Target Start/End: Original strand, 35337622 - 35337741
Alignment:
Q  568 tgagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttgtaaaaataaaagttcaaacaacatatttctcatatgttagg-ggttaaaa 666  Q
    |||||||||||||| |||| |||||||| |  |||||||||||||||||||||| ||||  | ||||| | |||||||| | ||||||||| ||| ||||    
T  35337622 tgagaagacgccacgtgtcccaaaaaaggggtcataatcgcaactttttgtaaagataaggggtcaaaaagcatatttcccttatgttaggaggtcaaaa 35337721  T
Q  667 gagcatattgccctaaacat 686  Q
    ||||||||| ||||||||||    
T  35337722 gagcatatttccctaaacat 35337741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 541 - 686
Target Start/End: Complemental strand, 42271564 - 42271417
Alignment:
Q  541 attttgtcccctttcgtcccaaaattg-tgagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttgtaaaaataaaagttcaaacaac 639  Q
    |||||| |||| ||| ||| ||||||| |||||||||||||| |||  |||||||  | ||||||||||||||||||||||| ||||  | ||||| | |    
T  42271564 attttggcccccttcatccgaaaattgctgagaagacgccacgtgttccaaaaaaagggccataatcgcaactttttgtaaacataaggggtcaaaaagc 42271465  T
Q  640 atatttctcatatgttagg-ggttaaaagagcatattgccctaaacat 686  Q
    ||||||| | ||||||||| ||| ||||||||||||| ||||||||||    
T  42271464 atatttcccttatgttaggaggtcaaaagagcatatttccctaaacat 42271417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 548 - 617
Target Start/End: Complemental strand, 6650735 - 6650665
Alignment:
Q  548 cccctttcgtcccaaaattg-tgagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttg 617  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| || | |||||||||||||||||||    
T  6650735 cccctttcgtcccaaaattgatgagaagacgccacatgtctcaaaacaggggccataatcgcaactttttg 6650665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 541 - 686
Target Start/End: Original strand, 11843250 - 11843396
Alignment:
Q  541 attttgtcccctttcgtcccaaaattg-tgagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttgtaaaaataaaagttcaaacaac 639  Q
    |||||| |||||||| ||||||||||| |||||||||||||| | |   ||||||| | ||||||| ||||||||||||||  ||||  | ||||| | |    
T  11843250 attttggcccctttcatcccaaaattgctgagaagacgccacgtattcaaaaaaaggggccataattgcaactttttgtaaggataaggggtcaaaaagc 11843349  T
Q  640 atatttctcatatgttaggggttaaaagagcatattgccctaaacat 686  Q
    ||||||  | |||||||||||| ||||||||||||| ||||||||||    
T  11843350 atattttccttatgttaggggtcaaaagagcatatttccctaaacat 11843396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 536 - 617
Target Start/End: Complemental strand, 15681867 - 15681785
Alignment:
Q  536 ttacgattttgtcccctttcgtcccaaaattg-tgagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttg 617  Q
    |||| |||||| |||||||||||||||||||  |||||||||||||| |||| |||||||||| |||||||||||||||||||    
T  15681867 ttacaattttggcccctttcgtcccaaaatttatgagaagacgccacgtgtcccaaaaaagaggccataatcgcaactttttg 15681785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 541 - 684
Target Start/End: Complemental strand, 4193782 - 4193637
Alignment:
Q  541 attttgtcccctttcgtcccaaaattg-tgagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttgtaaaaataaaagttcaaacaa- 638  Q
    |||||| |||||||| | ||||||||| ||| |||||| ||| ||||||||||||| | ||||||| ||||||||||| ||| ||||  | |||||  |     
T  4193782 attttggcccctttccttccaaaattgctgaaaagacgtcacgtgtctcaaaaaaggggccataattgcaactttttgaaaagataaggggtcaaaagat 4193683  T
Q  639 catatttctcatatgttaggggttaaaagagcatattgccctaaac 684  Q
    |||||||||| ||||||| |||| ||||||||||||| ||||||||    
T  4193682 catatttctcttatgttaagggtcaaaagagcatatttccctaaac 4193637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 541 - 687
Target Start/End: Complemental strand, 26385493 - 26385345
Alignment:
Q  541 attttgtcccctttcgtcccaaaattg-tgagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttgtaaaaataaaagttcaaacaa- 638  Q
    |||||| ||||||| |||| ||||||| | | ||||||||||||||| ||||| |  | |||||||||||||||||||  || |||| || |||||  |     
T  26385493 attttggccccttttgtcctaaaattgctaataagacgccacatgtcccaaaacatgggccataatcgcaactttttgagaagataagaggtcaaaatat 26385394  T
Q  639 catatttctcatatgttaggggttaaaagagcatattgccctaaacatg 687  Q
    |||||||||| |||||||||||| |||| |||||||| |||||||||||    
T  26385393 catatttctcttatgttaggggtcaaaatagcatatttccctaaacatg 26385345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 541 - 686
Target Start/End: Original strand, 41452321 - 41452468
Alignment:
Q  541 attttgtcccctttcgtcccaaaattg-tgagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttgtaaaaataaaagttcaaacaac 639  Q
    |||||| |||||||| ||| ||||||| |||||||||| ||| |||| |||||||| |  |||||||||||||||||||||| ||||  | ||||| | |    
T  41452321 attttggcccctttcatccaaaaattgctgagaagacgacacgtgtcccaaaaaaggggtcataatcgcaactttttgtaaagataaggggtcaaaaagc 41452420  T
Q  640 atatttctcatatgttagg-ggttaaaagagcatattgccctaaacat 686  Q
    ||||||| | ||||||||| ||| | ||||| ||||| ||||||||||    
T  41452421 atatttcccttatgttaggaggtcagaagagtatatttccctaaacat 41452468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 541 - 626
Target Start/End: Complemental strand, 5087228 - 5087142
Alignment:
Q  541 attttgtcccctttcgtcccaaaattg-tgagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttgtaaaaataa 626  Q
    |||||| |||||||||||||||||||| |||||||||||||| |||| ||||| || || |||||||||||||||||| ||| ||||    
T  5087228 attttggcccctttcgtcccaaaattgatgagaagacgccacgtgtcccaaaatagggatcataatcgcaactttttgaaaagataa 5087142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 527 - 689
Target Start/End: Complemental strand, 3769650 - 3769486
Alignment:
Q  527 ttcaaaatgttacgattttgtcccctttcgtcccaaaattgt-gagaagacgccacatgtctcaaaaaagagaccataatcgcaacttttt-gtaaaaat 624  Q
    |||| |||||| |||||||  || |||||||   |||||||| ||||||| |||||||||| | |||| | || ||||||||||||||||| ||||| ||    
T  3769650 ttcacaatgttgcgatttttgcctctttcgttttaaaattgttgagaagatgccacatgtcccgaaaagg-gatcataatcgcaacttttttgtaaagat 3769552  T
Q  625 aaaagttcaaacaacatatttctcatatgtt-aggggttaaaagagcatattgccctaaacatggg 689  Q
    || || ||||| | ||||||||||||||||| |||||| |||| |||||||| | |||||||||||    
T  3769551 aagagatcaaaaagcatatttctcatatgttaaggggtcaaaaaagcatatttctctaaacatggg 3769486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 530 - 686
Target Start/End: Original strand, 21225610 - 21225766
Alignment:
Q  530 aaaatgttacgattttgtcccctttcgtcccaaaattgt-gagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttgtaaaaataaaa 628  Q
    ||||||||  |||||||  ||||||||||| |||||||| ||||||||| ||| |||  |||||||  | | ||||||||||||||||||||| |  |      
T  21225610 aaaatgttgtgattttggtccctttcgtcctaaaattgttgagaagacgtcacgtgttccaaaaaatggtc-ataatcgcaactttttgtaaagacgagg 21225708  T
Q  629 gttcaaacaacatatttctcatatgttaggggttaaaagagcatattgccctaaacat 686  Q
    | ||||| | |||||||| | |||||||||||| ||||||||||||| ||||||||||    
T  21225709 ggtcaaatagcatatttcccttatgttaggggtcaaaagagcatatttccctaaacat 21225766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 541 - 691
Target Start/End: Complemental strand, 39182166 - 39182015
Alignment:
Q  541 attttgtcccctttcgtcccaaaattg-tgagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttgtaaaaataaaagttc-aaacaa 638  Q
    |||||| ||||||| |||||||||||| |||||| || |||| |||| ||||| |||| |||||||||||||||||||  || ||||  | || ||| |     
T  39182166 attttggccccttttgtcccaaaattgctgagaaaacaccacgtgtcccaaaacagaggccataatcgcaactttttgagaagataaggggtcaaaagat 39182067  T
Q  639 catatttctcatatgttaggggttaaaagagcatattgccctaaacatggggt 691  Q
    |||||||| | |||||||  ||| ||||||||||||| |||||||||||||||    
T  39182066 catatttcccttatgtta-tggtcaaaagagcatatttccctaaacatggggt 39182015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 557 - 686
Target Start/End: Complemental strand, 8527011 - 8526881
Alignment:
Q  557 tcccaaaattg-tgagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttgtaaaaataaaagttcaaacaacatatttctcatatgtt 655  Q
    ||||||||||| |||||||| ||||| ||||||||||||| | ||||||| |||||||||||||||||| |  | ||||| | |||||||| | ||||||    
T  8527011 tcccaaaattgctgagaagatgccacgtgtctcaaaaaaggggccataattgcaactttttgtaaaaat-aggggtcaaaaagcatatttcccttatgtt 8526913  T
Q  656 agg-ggttaaaagagcatattgccctaaacat 686  Q
    ||| ||| ||| |||||||||  |||||||||    
T  8526912 aggaggtcaaatgagcatattttcctaaacat 8526881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 541 - 686
Target Start/End: Complemental strand, 10655561 - 10655415
Alignment:
Q  541 attttgtcccctttcgtcccaaaattg-tgagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttgtaaaaataaaagttcaaacaac 639  Q
    |||||| |||||||| ||||||||||| | |||||| ||||| |||| || ||||  |  |||||||||||||||||||||| ||||  | | ||| ||     
T  10655561 attttggcccctttcatcccaaaattgctcagaagatgccacgtgtcccagaaaatgggtcataatcgcaactttttgtaaagataaggggttaaa-aaa 10655463  T
Q  640 atatttctcatatgttagggg-ttaaaagagcatattgccctaaacat 686  Q
    ||||||||| ||| ||||||| ||||||||||||||| ||||||||||    
T  10655462 atatttctcttatattaggggattaaaagagcatatttccctaaacat 10655415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 541 - 691
Target Start/End: Complemental strand, 24464808 - 24464655
Alignment:
Q  541 attttgtcccctttcgtcccaaaattg-tgagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttgtaaaaataaaagttc-aaacaa 638  Q
    ||||||||||| ||| | | ||||||| ||||||||||||||||||| ||||| |  ||||||||||||||| |||||  || ||||  | || ||| |     
T  24464808 attttgtcccccttcattctaaaattgctgagaagacgccacatgtcacaaaacaatgaccataatcgcaacattttgagaagataaggggtcaaaagat 24464709  T
Q  639 catatttctcatatgtta-ggggttaaaagagcatattgccctaaacatggggt 691  Q
    |||||||| | ||||||| ||||| |||||| |||||| |||||||||||||||    
T  24464708 catatttcccttatgttagggggtcaaaagaacatatttccctaaacatggggt 24464655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 541 - 686
Target Start/End: Original strand, 10023857 - 10024003
Alignment:
Q  541 attttgtcccctttcgtcccaaaattg-tgagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttgtaaaaataaaagttcaaacaac 639  Q
    |||||| ||||||| ||| |||||||| ||||||||| |||| |||| |||||| | | ||||| ||||||||||||||||| ||||  | ||||| ||     
T  10023857 attttggccccttttgtctcaaaattgctgagaagacaccacgtgtcccaaaaagggg-ccatattcgcaactttttgtaaagataaggggtcaaaaaaa 10023955  T
Q  640 atatttctcatatgttaggggtt-aaaagagcatattgccctaaacat 686  Q
    ||||||  | ||||| ||||| | ||||||||||||| ||||||||||    
T  10023956 atattttccttatgtaagggggtcaaaagagcatatttccctaaacat 10024003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 600 - 686
Target Start/End: Original strand, 18754398 - 18754485
Alignment:
Q  600 cataatcgcaactttttgtaaaaataaaagttcaaacaacatatttctcatatgtta-ggggttaaaagagcatattgccctaaacat 686  Q
    |||||||||||| ||||||||| ||||  | ||||| |||||||||| | ||||||| ||||| ||||||||||||| ||||||||||    
T  18754398 cataatcgcaacattttgtaaagataaggggtcaaaaaacatatttcccttatgttagggggtcaaaagagcatatttccctaaacat 18754485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 557 - 690
Target Start/End: Original strand, 19919691 - 19919825
Alignment:
Q  557 tcccaaaattg-tgagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttgtaaaaataaaagttcaaacaacatatttctcatatgtt 655  Q
    ||||||||||| |||||| |||| || |||| |||||||| | | |||||| |||||||||||||| ||||  | ||||| |||||||||  | ||||||    
T  19919691 tcccaaaattgctgagaaaacgctacgtgtcccaaaaaaggggctataatcacaactttttgtaaagataaggggtcaaaaaacatattttccttatgtt 19919790  T
Q  656 agg-ggttaaaagagcatattgccctaaacatgggg 690  Q
    ||| ||| |||||||||||||  |||||||||||||    
T  19919791 aggaggtcaaaagagcatatt-tcctaaacatgggg 19919825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 600 - 686
Target Start/End: Complemental strand, 20638663 - 20638576
Alignment:
Q  600 cataatcgcaactttttgtaaaaataaaagttcaaacaacatatttctcatatgttagg-ggttaaaagagcatattgccctaaacat 686  Q
    |||||||||||||||||||||| ||||  | ||||| | |||||||| | ||||||||| ||| ||||||||||||| ||||||||||    
T  20638663 cataatcgcaactttttgtaaagataaggggtcaaaaagcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacat 20638576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 536 - 617
Target Start/End: Original strand, 3403118 - 3403200
Alignment:
Q  536 ttacgattttgtcccctttcgtcccaaaattg-tgagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttg 617  Q
    |||| |||||| |||||||||||||||||||  |||| |||||||||||||| |||||||| |  ||||||||||| ||||||    
T  3403118 ttacaattttggcccctttcgtcccaaaattcctgaggagacgccacatgtcccaaaaaagtggtcataatcgcaagtttttg 3403200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 718 - 768
Target Start/End: Complemental strand, 11843229 - 11843178
Alignment:
Q  718 agccaaaatcgcaacattttgaaacata-ggggcgaaaagtgcagttgagcc 768  Q
    |||||||||||||||||||||||||||| ||||||| |||||||||| ||||    
T  11843229 agccaaaatcgcaacattttgaaacatagggggcgagaagtgcagtttagcc 11843178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 719 - 760
Target Start/End: Complemental strand, 3562483 - 3562441
Alignment:
Q  719 gccaaaatcgcaacattttgaaacataggg-gcgaaaagtgca 760  Q
    |||||||||||||||||||||||||||||| ||||||||||||    
T  3562483 gccaaaatcgcaacattttgaaacatagggagcgaaaagtgca 3562441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 722 - 768
Target Start/End: Original strand, 10655586 - 10655632
Alignment:
Q  722 aaaatcgcaacattttgaaacataggggcgaaaagtgcagttgagcc 768  Q
    ||||| ||||||||||||||||||| |||||||||||||||| ||||    
T  10655586 aaaattgcaacattttgaaacatagaggcgaaaagtgcagtttagcc 10655632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 541 - 617
Target Start/End: Complemental strand, 7365455 - 7365378
Alignment:
Q  541 attttgtcccctttcgtcccaaaattg-tgagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttg 617  Q
    |||||| ||| |||||||||||||||| |||||||| | ||| |||| ||||| |||| | |||||||||||||||||    
T  7365455 attttggcccttttcgtcccaaaattgctgagaagatgtcacgtgtcccaaaacagaggcaataatcgcaactttttg 7365378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 719 - 768
Target Start/End: Original strand, 36746757 - 36746806
Alignment:
Q  719 gccaaaatcgcaacattttgaaacataggggcgaaaagtgcagttgagcc 768  Q
    |||||||| |||||||||| |||||||||||||||||||| |||| ||||    
T  36746757 gccaaaattgcaacattttaaaacataggggcgaaaagtgtagtttagcc 36746806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 541 - 616
Target Start/End: Complemental strand, 5348260 - 5348184
Alignment:
Q  541 attttgtcccctttcgtcccaaaattg-tgagaagacgccacatgtctcaaaaaagagaccataatcgcaacttttt 616  Q
    |||||| || ||||||||||||||||| |||||||||| ||||| || ||||| ||   ||||||||||||||||||    
T  5348260 attttgacctctttcgtcccaaaattgctgagaagacgtcacatatcccaaaacaggagccataatcgcaacttttt 5348184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 541 - 691
Target Start/End: Complemental strand, 19493550 - 19493399
Alignment:
Q  541 attttgtcccctttcgtcccaaaattg-tgagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttgtaaaaataaaagttcaaacaa- 638  Q
    |||||| |||||||| ||||||||| | |||||||||||||| ||||  |||| || | |||||||| || |||||||  || ||||| | ||||| ||     
T  19493550 attttggcccctttcatcccaaaatggctgagaagacgccacgtgtcctaaaacaggggccataatcaca-ctttttgagaagataaagggtcaaaaaat 19493452  T
Q  639 catatttctcatatgttaggggttaaaagagcatattgccctaaacatggggt 691  Q
    |||||||  | |||||| ||||| |||| |||||||| || ||||||||||||    
T  19493451 catattttccttatgtttggggtcaaaatagcatatttccataaacatggggt 19493399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 721 - 760
Target Start/End: Original strand, 20636874 - 20636914
Alignment:
Q  721 caaaatcgcaacattttgaaacata-ggggcgaaaagtgca 760  Q
    ||||||||||||||||||||||||| |||||||||||||||    
T  20636874 caaaatcgcaacattttgaaacatagggggcgaaaagtgca 20636914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 720 - 768
Target Start/End: Complemental strand, 21224402 - 21224354
Alignment:
Q  720 ccaaaatcgcaacattttgaaacataggggcgaaaagtgcagttgagcc 768  Q
    ||||||| |||||||||||||||||| ||||||||| ||||||| ||||    
T  21224402 ccaaaattgcaacattttgaaacataagggcgaaaaatgcagtttagcc 21224354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 721 - 760
Target Start/End: Complemental strand, 27869244 - 27869204
Alignment:
Q  721 caaaatcgcaacattttgaaacata-ggggcgaaaagtgca 760  Q
    ||||||||||||||||||||||||| |||||||||||||||    
T  27869244 caaaatcgcaacattttgaaacatagggggcgaaaagtgca 27869204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 599 - 689
Target Start/End: Complemental strand, 26126427 - 26126336
Alignment:
Q  599 ccataatcgcaactttttgtaaaaataaaagttcaaacaa-catatttctcatatgttaggggttaaaagagcatattgccctaaacatggg 689  Q
    |||||||||||||||||||  || ||||  | |||||  | |||||||| | |||||||||||| |||| |||||||| |||||||||||||    
T  26126427 ccataatcgcaactttttgagaagataaggggtcaaaagatcatatttcccttatgttaggggtcaaaaaagcatatttccctaaacatggg 26126336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 719 - 760
Target Start/End: Original strand, 8527048 - 8527090
Alignment:
Q  719 gccaaaatcgcaacattttgaaacata-ggggcgaaaagtgca 760  Q
    ||||||||||||||||||||||| ||| |||||||||||||||    
T  8527048 gccaaaatcgcaacattttgaaatatagggggcgaaaagtgca 8527090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 548 - 617
Target Start/End: Original strand, 9822179 - 9822248
Alignment:
Q  548 cccctttcgtcccaaaattg-tgagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttg 617  Q
    |||||||||||||||||||| |||||||||||||  |||| | |||||| |  ||||||||||||||||||    
T  9822179 cccctttcgtcccaaaattgctgagaagacgccatgtgtc-ccaaaaaggggtcataatcgcaactttttg 9822248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 548 - 617
Target Start/End: Original strand, 10724104 - 10724173
Alignment:
Q  548 cccctttcgtcccaaaattg-tgagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttg 617  Q
    |||||||||||||||||||| |||||||||||||  |||| | |||||| |  ||||||||||||||||||    
T  10724104 cccctttcgtcccaaaattgctgagaagacgccatgtgtc-ccaaaaaggggtcataatcgcaactttttg 10724173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 719 - 768
Target Start/End: Original strand, 15681884 - 15681934
Alignment:
Q  719 gccaaaatcgcaacattttgaaacatagggg-cgaaaagtgcagttgagcc 768  Q
    |||||||||||||||||||||||| |||||| | |||||||||||| ||||    
T  15681884 gccaaaatcgcaacattttgaaacttaggggtctaaaagtgcagtttagcc 15681934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 719 - 760
Target Start/End: Complemental strand, 24597567 - 24597525
Alignment:
Q  719 gccaaaatcgcaacattttgaaacatagg-ggcgaaaagtgca 760  Q
    ||||||||| ||||||||||||||||||| |||||||||||||    
T  24597567 gccaaaatcacaacattttgaaacataggaggcgaaaagtgca 24597525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 719 - 768
Target Start/End: Original strand, 31494164 - 31494214
Alignment:
Q  719 gccaaaatcgcaacattttgaaacatag-gggcgaaaagtgcagttgagcc 768  Q
    |||||||||||||||||||||||||||| | ||||||| ||||||| ||||    
T  31494164 gccaaaatcgcaacattttgaaacatagagtgcgaaaaatgcagtttagcc 31494214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 657 - 691
Target Start/End: Original strand, 33237604 - 33237638
Alignment:
Q  657 ggggttaaaagagcatattgccctaaacatggggt 691  Q
    ||||| |||||||||||||||||||||||||||||    
T  33237604 ggggtgaaaagagcatattgccctaaacatggggt 33237638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 570 - 616
Target Start/End: Original strand, 46267348 - 46267394
Alignment:
Q  570 agaagacgccacatgtctcaaaaaagagaccataatcgcaacttttt 616  Q
    ||||| ||||||||||| |||||||| | ||||||||||||||||||    
T  46267348 agaagccgccacatgtcccaaaaaaggggccataatcgcaacttttt 46267394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 720 - 768
Target Start/End: Original strand, 2331273 - 2331322
Alignment:
Q  720 ccaaaatcgcaacattttgaaacata-ggggcgaaaagtgcagttgagcc 768  Q
    ||||||| |||||||||| ||||||| |||||||||||||||||| ||||    
T  2331273 ccaaaattgcaacattttaaaacatagggggcgaaaagtgcagtttagcc 2331322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 719 - 763
Target Start/End: Complemental strand, 13577837 - 13577792
Alignment:
Q  719 gccaaaatcgcaacattttgaaacatag-gggcgaaaagtgcagtt 763  Q
    |||||||||||||||||||||||||||| | |||| ||||||||||    
T  13577837 gccaaaatcgcaacattttgaaacatagagagcgagaagtgcagtt 13577792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 650 - 691
Target Start/End: Complemental strand, 25002828 - 25002787
Alignment:
Q  650 tatgttaggggttaaaagagcatattgccctaaacatggggt 691  Q
    |||||||||||| |||||||||| || |||||||||||||||    
T  25002828 tatgttaggggtcaaaagagcatgtttccctaaacatggggt 25002787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 64; Significance: 1e-27; HSPs: 34)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 541 - 686
Target Start/End: Complemental strand, 24051240 - 24051093
Alignment:
Q  541 attttgtcccctttcgtcccaaaattg-tgagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttgtaaaaataaaagttcaaacaac 639  Q
    |||||| ||| |||| ||||||||||| |||||||||||||| |||| ||||||||||  |||||||||||||||||||||| ||||  | ||||| |      
T  24051240 attttggcccatttcatcccaaaattgatgagaagacgccacgtgtcccaaaaaagaggtcataatcgcaactttttgtaaatataaggggtcaaaaagt 24051141  T
Q  640 atatttctcatatgttagg-ggttaaaagagcatattgccctaaacat 686  Q
    ||||||||| ||||||||| ||| ||||||||||||| ||||||||||    
T  24051140 atatttctcttatgttaggaggtcaaaagagcatatttccctaaacat 24051093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 543 - 686
Target Start/End: Complemental strand, 22269636 - 22269492
Alignment:
Q  543 tttgtcccctttcgtcccaaaattgt-gagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttgtaaaaataaaagttcaaacaacat 641  Q
    |||| ||||||||||| ||||||||| ||||||||||||| |||| |||||||| | |||||| | |||||||||||||| ||||  | ||||| |||||    
T  22269636 tttggcccctttcgtctcaaaattgttgagaagacgccacgtgtcccaaaaaaggggccataaacacaactttttgtaaagataaggggtcaaaaaacat 22269537  T
Q  642 atttctcatatgttaggggttaaaagagcatattgccctaaacat 686  Q
    ||||| | ||||||| |||| |||||| |||||| ||||||||||    
T  22269536 atttcccttatgttaagggtcaaaagaacatatttccctaaacat 22269492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 541 - 675
Target Start/End: Complemental strand, 32451958 - 32451822
Alignment:
Q  541 attttgtcccctttcgtcccaaaattgt-gagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttgtaaaaataaaagttcaaacaac 639  Q
    |||||| |||||||| ||| |||||||| ||||||||||||||||||||||||||| |  |||||||||||||||||||||| ||||  | ||||| | |    
T  32451958 attttggcccctttcatccaaaaattgttgagaagacgccacatgtctcaaaaaaggggtcataatcgcaactttttgtaaagataaggggtcaaaaagc 32451859  T
Q  640 atatttctcatatgttagg-ggttaaaagagcatatt 675  Q
    ||||||| | ||||||||| ||| |||||||||||||    
T  32451858 atatttcccttatgttaggaggtcaaaagagcatatt 32451822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 541 - 686
Target Start/End: Original strand, 35102563 - 35102710
Alignment:
Q  541 attttgtcccctttcgtcccaaaattg-tgagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttgtaaaaataaaagttcaaacaac 639  Q
    |||||| |||| ||| ||||||||||| |||||||||||||| |||| |||||||| | ||||||| ||||||||||||||| ||||  | ||||| | |    
T  35102563 attttggcccccttcatcccaaaattgctgagaagacgccacgtgtcccaaaaaaggggccataattgcaactttttgtaaagataaggggtcaaaaagc 35102662  T
Q  640 atatttctcatatgttagg-ggttaaaagagcatattgccctaaacat 686  Q
    ||||||| | ||||||||| ||| ||||||||||||| ||||||||||    
T  35102663 atatttcccttatgttaggaggtcaaaagagcatatttccctaaacat 35102710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 560 - 686
Target Start/End: Complemental strand, 15298697 - 15298570
Alignment:
Q  560 caaaattg-tgagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttgtaaaaataaaagttcaaacaacatatttctcatatgttagg 658  Q
    |||||||| |||||||||||||| |||| |||||||| ||||||||||||||||||||||||| ||||  | ||||| |||||||||  | |||||||||    
T  15298697 caaaattgctgagaagacgccacttgtcccaaaaaag-gaccataatcgcaactttttgtaaagataagggatcaaaaaacatattttccttatgttagg 15298599  T
Q  659 -ggttaaaagagcatattgccctaaacat 686  Q
     ||| ||||||||||||| ||||||||||    
T  15298598 aggtcaaaagagcatatttccctaaacat 15298570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 572 - 686
Target Start/End: Original strand, 4597509 - 4597624
Alignment:
Q  572 aagacgccacatgtctcaaaaaagagaccataatcgcaactttttgtaaaaataaaagttcaaacaacatatttctcatatgttagg-ggttaaaagagc 670  Q
    ||||||||||||||| |||||||| | ||||||| ||||||||||||||| ||||  | ||||| |||||||||| | ||||||||| ||| ||||||||    
T  4597509 aagacgccacatgtcccaaaaaaggggccataattgcaactttttgtaaagataaggggtcaaaaaacatatttcccttatgttaggaggtcaaaagagc 4597608  T
Q  671 atattgccctaaacat 686  Q
    ||||| ||||||||||    
T  4597609 atatttccctaaacat 4597624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 541 - 686
Target Start/End: Complemental strand, 18791589 - 18791442
Alignment:
Q  541 attttgtcccctttcgtcccaaaattgt-gagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttgtaaaaataaaagttcaaacaac 639  Q
    |||||| |||| ||| |||||||||||| ||||||||||||| ||||  ||||||| | ||||||||||||||||||||||| || |  | ||||| | |    
T  18791589 attttggcccccttcatcccaaaattgttgagaagacgccacgtgtcctaaaaaaggggccataatcgcaactttttgtaaagatgaggggtcaaaaagc 18791490  T
Q  640 atatttctcatatgtta-ggggttaaaagagcatattgccctaaacat 686  Q
    ||||||| | ||||||| ||||| ||||||||||||| ||||||||||    
T  18791489 atatttcccttatgttagggggtcaaaagagcatatttccctaaacat 18791442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 557 - 686
Target Start/End: Complemental strand, 34834141 - 34834010
Alignment:
Q  557 tcccaaaattg-tgagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttgtaaaaataaaagttcaaacaacatatttctcatatgtt 655  Q
    ||||||||||| |||||||||||||| |||| |||||||| | ||||||| | ||||||||||||| ||||  | ||||| |||||||||| | ||||||    
T  34834141 tcccaaaattgctgagaagacgccacgtgtcccaaaaaaggggccataattgtaactttttgtaaagataacgggtcaaaaaacatatttcccttatgtt 34834042  T
Q  656 agg-ggttaaaagagcatattgccctaaacat 686  Q
    ||| ||| ||||||||||||| ||||||||||    
T  34834041 aggaggtcaaaagagcatatttccctaaacat 34834010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 543 - 686
Target Start/End: Complemental strand, 24603591 - 24603446
Alignment:
Q  543 tttgtcccctttcgtcccaaaattg-tgagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttgtaaaaataaaagttcaaacaacat 641  Q
    |||| |||| ||| ||||||||||| |||||||||||||  ||||  ||||||| | ||||||||||||||||||||||| ||||  | ||||| | |||    
T  24603591 tttggcccccttcatcccaaaattgctgagaagacgccatgtgtccaaaaaaaggggccataatcgcaactttttgtaaagataaggggtcaaaaagcat 24603492  T
Q  642 atttctcatatgttagg-ggttaaaagagcatattgccctaaacat 686  Q
    ||||| | ||||||||| ||| ||||||||||||| ||||||||||    
T  24603491 atttcccttatgttaggaggtcaaaagagcatatttccctaaacat 24603446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 536 - 686
Target Start/End: Complemental strand, 3118916 - 3118764
Alignment:
Q  536 ttacgattttgtcccctttcgtcccaaaattg-tgagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttgtaaaaataaaagttcaa 634  Q
    |||| |||||| |||||||| ||||||||||| | |||||| | ||| |||| || ||||| |  ||||||||||| |||||||||| |||| || ||||    
T  3118916 ttacaattttggcccctttcatcccaaaattgatcagaagatgtcacgtgtcccagaaaaggggtcataatcgcaaatttttgtaaagataagaggtcaa 3118817  T
Q  635 acaacatatttctcatatgtta-ggggttaaaagagcatattgccctaaacat 686  Q
    | |||||||||| | ||||||| ||||| ||||||||||||| ||||||||||    
T  3118816 aaaacatatttcccttatgttagggggtcaaaagagcatatttccctaaacat 3118764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 541 - 691
Target Start/End: Original strand, 24615765 - 24615917
Alignment:
Q  541 attttgtcccctttcgtcccaaaattg-tgagaagacgccacatgtctcaaaaaagagac-cataatcgcaactttttgtaaaaataaaagttcaaacaa 638  Q
    |||||| || ||||||||| ||||||| |||||| |||||||||||| ||||||  ||   |||||||||||||||| ||||| | ||  | ||||| |     
T  24615765 attttggcctctttcgtccaaaaattgctgagaaaacgccacatgtcccaaaaataagggtcataatcgcaacttttagtaaagagaatgggtcaaaaag 24615864  T
Q  639 catatttctcatatgttaggggttaaaagagcatattgccctaaacatggggt 691  Q
    ||||||||||||||||||||||| ||||||||||||| |||||| | ||||||    
T  24615865 catatttctcatatgttaggggtcaaaagagcatatttccctaatcgtggggt 24615917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 541 - 686
Target Start/End: Original strand, 14572250 - 14572397
Alignment:
Q  541 attttgtcccctttcgtcccaaaattg-tgagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttgtaaaaataaaagttcaaacaac 639  Q
    |||||| |||||||| ||| ||||||| |||||||| |||||||||| |||||||  | |||||||||||||||||| |||| ||||  | ||||| | |    
T  14572250 attttggcccctttcatccaaaaattgctgagaagatgccacatgtcccaaaaaaagggccataatcgcaactttttataaagataaggggtcaaaaagc 14572349  T
Q  640 atatttctcatatgttagg-ggttaaaagagcatattgccctaaacat 686  Q
    ||||||| | |||||||||  || ||||||||||||| ||||||||||    
T  14572350 atatttcccttatgttaggatgtcaaaagagcatatttccctaaacat 14572397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 568 - 686
Target Start/End: Original strand, 26710407 - 26710526
Alignment:
Q  568 tgagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttgtaaaaataaaagttcaaacaacatatttctcatatgttagg-ggttaaaa 666  Q
    |||||||| ||||| |||| |||||||| | ||||||||||||||||||||||| ||||  | ||||| |||||||||  | ||||||||| ||| ||||    
T  26710407 tgagaagatgccacgtgtcccaaaaaaggggccataatcgcaactttttgtaaagataaggggtcaaaaaacatattttccttatgttaggaggtcaaaa 26710506  T
Q  667 gagcatattgccctaaacat 686  Q
    ||||||||| ||||||||||    
T  26710507 gagcatatttccctaaacat 26710526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 541 - 686
Target Start/End: Complemental strand, 31211026 - 31210879
Alignment:
Q  541 attttgtcccctttcgtcccaaaattg-tgagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttgtaaaaataaaagttcaaacaac 639  Q
    |||||| |||||||| ||||||||||| ||||||||| |||| |||| ||||||||   | ||||||||||||||||||||| ||||  | ||||| | |    
T  31211026 attttggcccctttcatcccaaaattgctgagaagacaccacgtgtcccaaaaaaggtgctataatcgcaactttttgtaaagataaggggtcaaaaagc 31210927  T
Q  640 atatttctcatatgttagg-ggttaaaagagcatattgccctaaacat 686  Q
    ||||||| | ||||||||| ||| |||||||||||||  |||||||||    
T  31210926 atatttcccttatgttaggaggtcaaaagagcatattttcctaaacat 31210879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 541 - 686
Target Start/End: Original strand, 22968228 - 22968373
Alignment:
Q  541 attttgtcccctttcgtcccaaaattg-tgagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttgtaaaaataaaagttcaaacaac 639  Q
    |||||| |||||||| ||||||||||| | |||||| | ||| ||||||| ||||| | | ||||||||||||||||||||| || || | ||||| |||    
T  22968228 attttggcccctttcatcccaaaattgctcagaagatgtcacgtgtctcagaaaagggtc-ataatcgcaactttttgtaaagat-aagggtcaaaaaac 22968325  T
Q  640 atatttctcatatgtta-ggggttaaaagagcatattgccctaaacat 686  Q
    ||||||| | ||||||| ||||| ||||||||||||| ||||||||||    
T  22968326 atatttcccttatgttagggggtcaaaagagcatatttccctaaacat 22968373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 541 - 686
Target Start/End: Complemental strand, 23820165 - 23820020
Alignment:
Q  541 attttgtcccctttcgtcccaaaattg-tgagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttgtaaaaataaaagttcaaacaac 639  Q
    |||||| |||||||| ||||||||||| | |||||| | ||| ||||||| ||||| | | ||||||||||||||||||||| || || | ||||| |||    
T  23820165 attttggcccctttcatcccaaaattgctcagaagatgtcacgtgtctcagaaaagggtc-ataatcgcaactttttgtaaagat-aagggtcaaaaaac 23820068  T
Q  640 atatttctcatatgtta-ggggttaaaagagcatattgccctaaacat 686  Q
    ||||||| | ||||||| ||||| ||||||||||||| ||||||||||    
T  23820067 atatttcccttatgttagggggtcaaaagagcatatttccctaaacat 23820020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 568 - 686
Target Start/End: Complemental strand, 25819888 - 25819769
Alignment:
Q  568 tgagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttgtaaaaataaaagttcaaacaacatatttctcatatgttagg-ggttaaaa 666  Q
    |||||||||||||| |||| |||||||| |  |||||||||||||||||||||| ||||  | ||||| | |||||||| | ||||||||| ||| | ||    
T  25819888 tgagaagacgccacgtgtcccaaaaaaggggtcataatcgcaactttttgtaaagataaggggtcaaaaagcatatttcccttatgttaggaggtcagaa 25819789  T
Q  667 gagcatattgccctaaacat 686  Q
    ||| ||||| ||||||||||    
T  25819788 gagtatatttccctaaacat 25819769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 578 - 686
Target Start/End: Complemental strand, 8412952 - 8412843
Alignment:
Q  578 ccacatgtctcaaaaaagagaccataatcgcaactttttgtaaaaataaaagttcaaacaacatatttctcatatgtta-ggggttaaaagagcatattg 676  Q
    |||| |||| |||||||| |  |||||||||||||||||||||| ||||  | ||||| |||||||||| | ||||||| ||||| |||||||||||||     
T  8412952 ccacgtgtcccaaaaaaggggtcataatcgcaactttttgtaaagataaggggtcaaaaaacatatttcccttatgttagggggtcaaaagagcatattt 8412853  T
Q  677 ccctaaacat 686  Q
    | ||||||||    
T  8412852 ctctaaacat 8412843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 552 - 626
Target Start/End: Original strand, 20863811 - 20863886
Alignment:
Q  552 tttcgtcccaaaattg-tgagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttgtaaaaataa 626  Q
    |||||| ||||||||| |||||||||||||  |||| |||||||| | ||||||||||||||||||||||| ||||    
T  20863811 tttcgttccaaaattgctgagaagacgccatgtgtcccaaaaaaggggccataatcgcaactttttgtaaagataa 20863886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 541 - 688
Target Start/End: Complemental strand, 4371124 - 4370981
Alignment:
Q  541 attttgtcccctttcgtcccaaaattg-tgagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttgtaaaaataaaagttcaaacaa- 638  Q
    |||||| |||||||| || |||||||| |||||| |||||| ||||| ||||||| |      | ||||||||||||||||| ||||  | |||||  |     
T  4371124 attttggcccctttcatctcaaaattgctgagaaaacgccatatgtcccaaaaaaaa------agtcgcaactttttgtaaagataaggggtcaaaggag 4371031  T
Q  639 catatttctcatatgttaggggttaaaagagcatattgccctaaacatgg 688  Q
    |||||||| | |||||||||||| ||||||||||||| ||||||||||||    
T  4371030 catatttcccttatgttaggggtcaaaagagcatatttccctaaacatgg 4370981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 541 - 617
Target Start/End: Complemental strand, 34528380 - 34528303
Alignment:
Q  541 attttgtcccctttcgtcccaaaattg-tgagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttg 617  Q
    |||||| |||||||||||||||||||| |||||||||  |||||||| ||||| ||   |||||||||||||||||||    
T  34528380 attttggcccctttcgtcccaaaattgctgagaagacatcacatgtcccaaaacagtcgccataatcgcaactttttg 34528303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 553 - 626
Target Start/End: Original strand, 23124804 - 23124878
Alignment:
Q  553 ttcgtcccaaaattg-tgagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttgtaaaaataa 626  Q
    ||||||||||| ||| |||||||||||||||||||   |||||| |  |||||||||||||||||||||| ||||    
T  23124804 ttcgtcccaaacttgctgagaagacgccacatgtcctcaaaaaggggtcataatcgcaactttttgtaaagataa 23124878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 719 - 763
Target Start/End: Original strand, 4013919 - 4013964
Alignment:
Q  719 gccaaaatcgcaacattttgaaacatagggg-cgaaaagtgcagtt 763  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||    
T  4013919 gccaaaatcgcaacattttgaaacttaggggacgaaaagtgcagtt 4013964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 720 - 760
Target Start/End: Complemental strand, 4597454 - 4597413
Alignment:
Q  720 ccaaaatcgcaacattttgaaacata-ggggcgaaaagtgca 760  Q
    |||||||||||||||||||||||||| |||||||||||||||    
T  4597454 ccaaaatcgcaacattttgaaacatagggggcgaaaagtgca 4597413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 541 - 656
Target Start/End: Original strand, 18749168 - 18749284
Alignment:
Q  541 attttgtcccctttcgtcccaaaattg-tgagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttgtaaaaataaaagttcaaacaac 639  Q
    |||||| |||||||| | | ||||||| | |||||| |||||||||| |||||||| |  ||||||| |||||||||||||| ||||  | ||||| | |    
T  18749168 attttggcccctttcatacaaaaattgataagaagaagccacatgtcccaaaaaaggggacataatcacaactttttgtaaagataaggggtcaaaaagc 18749267  T
Q  640 atatttctcatatgtta 656  Q
    ||||||| | |||||||    
T  18749268 atatttcccttatgtta 18749284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 721 - 760
Target Start/End: Complemental strand, 14194495 - 14194456
Alignment:
Q  721 caaaatcgcaacattttgaaacataggggcgaaaagtgca 760  Q
    ||||||||||||||||| ||||||||||| ||||||||||    
T  14194495 caaaatcgcaacattttaaaacataggggtgaaaagtgca 14194456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 722 - 760
Target Start/End: Complemental strand, 35102538 - 35102499
Alignment:
Q  722 aaaatcgcaacattttgaaacata-ggggcgaaaagtgca 760  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  35102538 aaaatcgcaacattttgaaacatagggggcgaaaagtgca 35102499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 719 - 760
Target Start/End: Original strand, 15298738 - 15298780
Alignment:
Q  719 gccaaaatcgcaacattttgaaacatag-gggcgaaaagtgca 760  Q
    |||||||||||||||||||||||||||| ||||||||| ||||    
T  15298738 gccaaaatcgcaacattttgaaacatagagggcgaaaaatgca 15298780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 719 - 768
Target Start/End: Complemental strand, 18749147 - 18749097
Alignment:
Q  719 gccaaaatcgcaacattttgaaacata-ggggcgaaaagtgcagttgagcc 768  Q
    |||||||| |||||||||| ||||||| |||||||||||||||||| ||||    
T  18749147 gccaaaattgcaacattttaaaacataaggggcgaaaagtgcagtttagcc 18749097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 719 - 768
Target Start/End: Complemental strand, 24051059 - 24051009
Alignment:
Q  719 gccaaaatcgcaacattttgaaacatag-gggcgaaaagtgcagttgagcc 768  Q
    |||||||||||||||||||||||| ||| |||||||||||| |||| ||||    
T  24051059 gccaaaatcgcaacattttgaaacttagagggcgaaaagtgaagtttagcc 24051009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 719 - 768
Target Start/End: Original strand, 26710561 - 26710611
Alignment:
Q  719 gccaaaatcgcaacattttgaaacatag-gggcgaaaagtgcagttgagcc 768  Q
    |||||||||||||||||||||||| ||| |||||||||||| |||| ||||    
T  26710561 gccaaaatcgcaacattttgaaacttagagggcgaaaagtgaagtttagcc 26710611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 719 - 768
Target Start/End: Original strand, 35102717 - 35102767
Alignment:
Q  719 gccaaaatcgcaacattttgaaacatag-gggcgaaaagtgcagttgagcc 768  Q
    |||||||| ||||||||||||||| ||| |||||||||||| |||||||||    
T  35102717 gccaaaattgcaacattttgaaacttagagggcgaaaagtgaagttgagcc 35102767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 719 - 763
Target Start/End: Complemental strand, 14572228 - 14572183
Alignment:
Q  719 gccaaaatcgcaacattttgaaacata-ggggcgaaaagtgcagtt 763  Q
    |||||||| |||||||||| ||||||| ||||||||||||||||||    
T  14572228 gccaaaattgcaacattttaaaacatagggggcgaaaagtgcagtt 14572183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 724 - 760
Target Start/End: Complemental strand, 32682418 - 32682381
Alignment:
Q  724 aatcgcaacattttgaaacata-ggggcgaaaagtgca 760  Q
    |||||||||||||||||||||| |||||||||||||||    
T  32682418 aatcgcaacattttgaaacatagggggcgaaaagtgca 32682381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0607 (Bit Score: 56; Significance: 9e-23; HSPs: 2)
Name: scaffold0607
Description:

Target: scaffold0607; HSP #1
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 541 - 686
Target Start/End: Original strand, 2121 - 2268
Alignment:
Q  541 attttgtcccctttcgtcccaaaattg-tgagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttgtaaaaataaaagttcaaacaac 639  Q
    |||||| |||||||| ||| ||||||| |||||||||||||| |||| |||||||| |  |||||||||||||||||||||| ||||  | ||||| | |    
T  2121 attttggcccctttcatccaaaaattgctgagaagacgccacgtgtcccaaaaaaggggtcataatcgcaactttttgtaaagataaggggtcaaaaagc 2220  T
Q  640 atatttctcatatgttagg-ggttaaaagagcatattgccctaaacat 686  Q
    ||||| | | ||||||||| ||| ||||||||||||| ||||||||||    
T  2221 atattgcccttatgttaggaggtcaaaagagcatatttccctaaacat 2268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0607; HSP #2
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 719 - 768
Target Start/End: Complemental strand, 2098 - 2048
Alignment:
Q  719 gccaaaatcgcaacattttgaaacata-ggggcgaaaagtgcagttgagcc 768  Q
    |||||||| |||||||||| ||||||| |||||||||||||||||| ||||    
T  2098 gccaaaattgcaacattttaaaacatagggggcgaaaagtgcagtttagcc 2048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0179 (Bit Score: 56; Significance: 9e-23; HSPs: 2)
Name: scaffold0179
Description:

Target: scaffold0179; HSP #1
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 557 - 686
Target Start/End: Original strand, 5738 - 5868
Alignment:
Q  557 tcccaaaattg-tgagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttgtaaaaataaaagttcaaacaacatatttctcatatgtt 655  Q
    ||||||||||| || ||||||||||| |||| |||||||| | ||||||||||||||||||||||| ||||  | ||||| |||||||||| | ||||||    
T  5738 tcccaaaattgctgcgaagacgccacgtgtcccaaaaaaggg-ccataatcgcaactttttgtaaagataaggggtcaaaaaacatatttcccttatgtt 5836  T
Q  656 agg-ggttaaaagagcatattgccctaaacat 686  Q
    ||| ||| ||||||||||||| ||||||||||    
T  5837 aggaggtcaaaagagcatatttccctaaacat 5868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0179; HSP #2
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 719 - 768
Target Start/End: Complemental strand, 5700 - 5650
Alignment:
Q  719 gccaaaatcgcaacattttgaaacata-ggggcgaaaagtgcagttgagcc 768  Q
    |||||||| | |||||||||||||||| |||||||||||||||||| ||||    
T  5700 gccaaaattgtaacattttgaaacatagggggcgaaaagtgcagtttagcc 5650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 56; Significance: 9e-23; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 541 - 686
Target Start/End: Original strand, 142019 - 142166
Alignment:
Q  541 attttgtcccctttcgtcccaaaattg-tgagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttgtaaaaataaaagttcaaacaac 639  Q
    |||||| |||||||| ||  ||||||| | |||||||||||| |||| |||||||  | ||||||||||||||||||||||| |||| || ||||| | |    
T  142019 attttggcccctttcatctaaaaattgcttagaagacgccacgtgtcccaaaaaatgggccataatcgcaactttttgtaaagataagaggtcaaaaagc 142118  T
Q  640 atatttctcatatgttagg-ggttaaaagagcatattgccctaaacat 686  Q
    ||||||| | ||||||||| ||| ||||||||||||| ||||||||||    
T  142119 atatttcccttatgttaggaggtcaaaagagcatatttccctaaacat 142166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 711 - 768
Target Start/End: Complemental strand, 142003 - 141945
Alignment:
Q  711 aataagaagccaaaatcgcaacattttgaaacatagggg-cgaaaagtgcagttgagcc 768  Q
    ||||||| |||||||| |||||||| | ||||||||||| |||||||||||||| ||||    
T  142003 aataagaggccaaaattgcaacattataaaacataggggacgaaaagtgcagtttagcc 141945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174 (Bit Score: 52; Significance: 2e-20; HSPs: 1)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 530 - 691
Target Start/End: Complemental strand, 29959 - 29796
Alignment:
Q  530 aaaatgttacgattttgtcccctttcgtcccaaaattg-tgagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttgtaaaaataaaa 628  Q
    |||||||| | |||||| |||||||||||||||||||| ||||||||||||||| ||  ||||  |||| ||||||| |||||||||||  || ||||      
T  29959 aaaatgttgcaattttggcccctttcgtcccaaaattgctgagaagacgccacaggttccaaatcagaggccataattgcaactttttgagaagataagg 29860  T
Q  629 gttc-aaacaacatatttctcatatgttaggggttaaaagagcatattgccctaaacatggggt 691  Q
    | || ||| | |||||||| | ||||||||||||  |||||||||||| ||| |||||||||||    
T  29859 ggtcaaaagatcatatttcccttatgttaggggtccaaagagcatatttccccaaacatggggt 29796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087 (Bit Score: 52; Significance: 2e-20; HSPs: 1)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 541 - 686
Target Start/End: Original strand, 25036 - 25183
Alignment:
Q  541 attttgtcccctttcgtcccaaaattg-tgagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttgtaaaaataaaagttcaaacaac 639  Q
    |||||| |||||||| | ||||||||| |||||||||||||| |||| |||||||| | |||||||| ||||||||  |||| ||||  | ||||| | |    
T  25036 attttggcccctttcataccaaaattgctgagaagacgccacgtgtcccaaaaaaggggccataatcacaacttttgttaaagataaggggtcaaaaagc 25135  T
Q  640 atatttctcatatgtta-ggggttaaaagagcatattgccctaaacat 686  Q
    ||||||| | ||||||| ||||| ||||||||||||| ||||||||||    
T  25136 atatttcccttatgttagggggtcaaaagagcatatttccctaaacat 25183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 52; Significance: 2e-20; HSPs: 2)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 541 - 686
Target Start/End: Complemental strand, 49891 - 49744
Alignment:
Q  541 attttgtcccctttcgtcccaaaattg-tgagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttgtaaaaataaaagttcaaacaac 639  Q
    |||||| |||||||| ||||||||||| | |||||| ||||| |||| || ||||| |  |||||||||||||||||||||| ||||  | ||||| |||    
T  49891 attttggcccctttcatcccaaaattgctcagaagatgccacgtgtcccagaaaaggggtcataatcgcaactttttgtaaagataaggggtcaaaaaac 49792  T
Q  640 atatttctcatatgtta-ggggttaaaagagcatattgccctaaacat 686  Q
    ||||||| | ||||||| ||||| ||||||||||||| ||| ||||||    
T  49791 atatttcccttatgttagggggtcaaaagagcatatttcccgaaacat 49744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062; HSP #2
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 541 - 686
Target Start/End: Complemental strand, 62430 - 62283
Alignment:
Q  541 attttgtcccctttcgtcccaaaattg-tgagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttgtaaaaataaaagttcaaacaac 639  Q
    |||||| |||||||| ||||||||||| | |||||| ||||| |||| || ||||| |  |||||||||||||||||||||| ||||  | ||||| |||    
T  62430 attttggcccctttcatcccaaaattgctcagaagatgccacgtgtcccagaaaaggggtcataatcgcaactttttgtaaagataaggggtcaaaaaac 62331  T
Q  640 atatttctcatatgtta-ggggttaaaagagcatattgccctaaacat 686  Q
    ||||||| | ||||||| ||||| ||||||||||||| ||| ||||||    
T  62330 atatttcccttatgttagggggtcaaaagagcatatttcccgaaacat 62283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0267 (Bit Score: 51; Significance: 8e-20; HSPs: 1)
Name: scaffold0267
Description:

Target: scaffold0267; HSP #1
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 551 - 691
Target Start/End: Original strand, 3650 - 3792
Alignment:
Q  551 ctttcgtcccaaaattg-tgagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttgtaaaaataaaagttcaaacaacatatttctca 649  Q
    ||||| ||||||||||| ||||||||| || | |||| |||||||| | | ||||||| ||||||||||||| ||||  | ||||| | |||||||| |     
T  3650 ctttcatcccaaaattgctgagaagacacctcgtgtcccaaaaaaggggctataatcgaaactttttgtaaagataaggggtcaaaaagcatatttccct 3749  T
Q  650 tatgtta-ggggttaaaagagcatattgccctaaacatggggt 691  Q
    ||||||| ||||| ||||||||||||| |||||||||||||||    
T  3750 tatgttagggggtcaaaagagcatatttccctaaacatggggt 3792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0291 (Bit Score: 49; Significance: 1e-18; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 549 - 687
Target Start/End: Complemental strand, 10145 - 10005
Alignment:
Q  549 ccctttcgtcccaaaattgt-gagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttgtaaaaataaaagttc-aaacaacatatttc 646  Q
    |||||||||||||||||||| |||||||||||||||||| |||||||| |   |||||||||||||||||  || ||||  | || ||| | |||||||     
T  10145 ccctttcgtcccaaaattgttgagaagacgccacatgtcacaaaaaaggggaaataatcgcaactttttgagaagataaggggtctaaagatcatatttt 10046  T
Q  647 tcatatgttaggggttaaaagagcatattgccctaaacatg 687  Q
     | ||||||| |||| ||||||||||||| |||||||||||    
T  10045 ccttatgttatgggtcaaaagagcatatttccctaaacatg 10005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0406 (Bit Score: 48; Significance: 5e-18; HSPs: 1)
Name: scaffold0406
Description:

Target: scaffold0406; HSP #1
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 541 - 682
Target Start/End: Complemental strand, 2223 - 2080
Alignment:
Q  541 attttgtcccctttcgtcccaaaattg-tgagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttgtaaaaataaaagttcaaacaac 639  Q
    |||||| |||||||| ||| ||||||| |||||||||||||| |||| |||||||| | | ||||||||||||||||||||| |||   | ||||| | |    
T  2223 attttggcccctttcatccaaaaattgctgagaagacgccacgtgtcccaaaaaaggggctataatcgcaactttttgtaaagatatggggtcaaaaagc 2124  T
Q  640 atatttctcatatgttagg-ggttaaaagagcatattgccctaa 682  Q
    || |||| | ||||||||| ||| ||||||||||||| ||||||    
T  2123 atgtttcccttatgttaggaggtcaaaagagcatatttccctaa 2080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0150 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 541 - 686
Target Start/End: Complemental strand, 6063 - 5916
Alignment:
Q  541 attttgtcccctttcgtcccaaaattg-tgagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttgtaaaaataaaagttcaaacaac 639  Q
    |||||| |||| ||| ||||||||||| |||||||| ||||| |||| ||||||| ||  ||||||||||||||||| |||| ||||  | ||||| | |    
T  6063 attttggcccccttcatcccaaaattgctgagaagatgccacgtgtcccaaaaaa-aggtcataatcgcaactttttataaagataaggggtcaaaaagc 5965  T
Q  640 atatttctcatatgtta--ggggttaaaagagcatattgccctaaacat 686  Q
    ||||||| | |||||||  ||||| |||| |||||||| ||||||||||    
T  5964 atatttcccttatgttaggggggtcaaaatagcatatttccctaaacat 5916  T

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Target: scaffold0024 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 555 - 690
Target Start/End: Original strand, 43910 - 44047
Alignment:
Q  555 cgtcccaaaattg-tgagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttgtaaaaataaaagttc-aaacaacatatttctcatat 652  Q
    |||| |||||||| |||||||||||||| |||| ||||| || ||||||| |||||||||||||  || ||||||| || ||| | |||||||| | |      
T  43910 cgtcacaaaattgctgagaagacgccacgtgtcccaaaacagggaccatagtcgcaactttttgagaagataaaaggtcaaaagatcatatttccctttc 44009  T
Q  653 gttaggggttaaaagagcatattgccctaaacatgggg 690  Q
    ||||||||| |||| ||||||||  |||||||||||||    
T  44010 gttaggggtcaaaaaagcatattttcctaaacatgggg 44047  T

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Target: scaffold0002 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 3)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 548 - 690
Target Start/End: Complemental strand, 455252 - 455107
Alignment:
Q  548 cccctttcgtcccaaaattg-tgagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttgtaaaaataaaagttc-aaacaacatattt 645  Q
    |||||||| ||||||||||| ||||||||||||||||||| |||||||  |  |||||||||||||||| |  || ||||  | || ||| | |||||||    
T  455252 cccctttcatcccaaaattgctgagaagacgccacatgtcccaaaaaatgggtcataatcgcaacttttagagaagataaggggtcaaaagatcatattt 455153  T
Q  646 ctcatatgtta-ggggttaaaagagcatattgccctaaacatgggg 690  Q
    | | ||||||| |||||||||||| ||||||  |||||||||||||    
T  455152 cccttatgttagggggttaaaagaacatattttcctaaacatgggg 455107  T

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Target: scaffold0002; HSP #2
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 657 - 690
Target Start/End: Complemental strand, 455044 - 455011
Alignment:
Q  657 ggggttaaaagagcatattgccctaaacatgggg 690  Q
    ||||||||||||||||||| ||||||||||||||    
T  455044 ggggttaaaagagcatatttccctaaacatgggg 455011  T

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Target: scaffold0002; HSP #3
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 719 - 763
Target Start/End: Original strand, 455282 - 455327
Alignment:
Q  719 gccaaaatcgcaacattttgaaacataggg-gcgaaaagtgcagtt 763  Q
    |||||||||||||||||||||||| |||||  ||||||||||||||    
T  455282 gccaaaatcgcaacattttgaaacttagggttcgaaaagtgcagtt 455327  T

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Target: scaffold0060 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 2)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 541 - 686
Target Start/End: Complemental strand, 66406 - 66259
Alignment:
Q  541 attttgtcccctttcgtcccaaaattg-tgagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttgtaaaaataaaagttcaaacaac 639  Q
    |||||| |||||||| ||| ||||||  |||||||||||||| |||   ||||||| |  |||||||||||||||||||||| ||||  | ||||| | |    
T  66406 attttggcccctttcatccaaaaatttctgagaagacgccacgtgttcaaaaaaaggggtcataatcgcaactttttgtaaagataaggggtcaaaaagc 66307  T
Q  640 atatttctcatatgttagg-ggttaaaagagcatattgccctaaacat 686  Q
    ||| ||| | ||||||||| ||| |||| |||||||| ||||||||||    
T  66306 atagttcccttatgttaggaggtcaaaatagcatatttccctaaacat 66259  T

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Target: scaffold0060; HSP #2
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 719 - 768
Target Start/End: Original strand, 66427 - 66477
Alignment:
Q  719 gccaaaatcgcaacattttgaaacata-ggggcgaaaagtgcagttgagcc 768  Q
    ||||||||  ||||||||||||||||| |||||||||||||||||| ||||    
T  66427 gccaaaattacaacattttgaaacatagggggcgaaaagtgcagtttagcc 66477  T

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Target: scaffold1875 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold1875
Description:

Target: scaffold1875; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 541 - 626
Target Start/End: Original strand, 828 - 914
Alignment:
Q  541 attttgtcccctttcgtcccaaaattgt-gagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttgtaaaaataa 626  Q
    |||||| |||| |||||||||||||||| |||||||||||| ||||| |||| ||| |  |||||| ||||||||||||||| ||||    
T  828 attttggcccccttcgtcccaaaattgttgagaagacgccagatgtcccaaataaggggtcataattgcaactttttgtaaagataa 914  T

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Target: scaffold1202 (Bit Score: 36; Significance: 0.00000000007; HSPs: 1)
Name: scaffold1202
Description:

Target: scaffold1202; HSP #1
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 600 - 686
Target Start/End: Original strand, 1906 - 1993
Alignment:
Q  600 cataatcgcaactttttgtaaaaataaaagttcaaacaacatatttctcatatgtta-ggggttaaaagagcatattgccctaaacat 686  Q
    |||||||||||||||||||||| ||||  | ||||| | |||||||| | ||||||| ||||| |||| |||||||| ||||||||||    
T  1906 cataatcgcaactttttgtaaagataaggggtcaaaaagcatatttcccttatgttagggggtcaaaatagcatatttccctaaacat 1993  T

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Target: scaffold0014 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 552 - 617
Target Start/End: Complemental strand, 112348 - 112282
Alignment:
Q  552 tttcgtcccaaaattgt-gagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttg 617  Q
    |||||||| |||||||  |||||||||||||||||| |||||||  |||||||| ||||||||||||    
T  112348 tttcgtcctaaaattgcagagaagacgccacatgtcccaaaaaatggaccataaccgcaactttttg 112282  T

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Target: scaffold0007 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 568 - 646
Target Start/End: Original strand, 250618 - 250696
Alignment:
Q  568 tgagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttgtaaaaataaaagttcaaacaacatatttc 646  Q
    |||||||||||||| || | |||||||| | |||||||| |||||||||||||| ||||  | ||||| ||||||||||    
T  250618 tgagaagacgccacgtgccccaaaaaaggggccataatcacaactttttgtaaagataaggggtcaaaaaacatatttc 250696  T

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Target: scaffold0171 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 536 - 626
Target Start/End: Complemental strand, 9270 - 9178
Alignment:
Q  536 ttacgattttgtcccctttcgtcccaaaattg-tgagaagacgccacatgtctcaaaaaa-gagaccataatcgcaactttttgtaaaaataa 626  Q
    |||| |||||| |||||||||||||||||||| | |||||||| ||| |||| ||||||| | |  |||||||||||||||||| ||| ||||    
T  9270 ttacaattttggcccctttcgtcccaaaattgcttagaagacgtcacgtgtcccaaaaaagggggtcataatcgcaactttttgaaaagataa 9178  T

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Target: scaffold0064 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 568 - 626
Target Start/End: Complemental strand, 54573 - 54516
Alignment:
Q  568 tgagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttgtaaaaataa 626  Q
    ||||||| ||||||||||| |||||| | | ||||||||||||||||||||||| ||||    
T  54573 tgagaagccgccacatgtcccaaaaagggg-ccataatcgcaactttttgtaaagataa 54516  T

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Target: scaffold0005 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 541 - 626
Target Start/End: Original strand, 35176 - 35262
Alignment:
Q  541 attttgtcccctttcgtcccaaaattgt-gagaagacgccacatgtctcaaaaaagagaccataatcgcaactttttgtaaaaataa 626  Q
    |||||| || |||||||| ||||||||| ||||| ||||||  |||||||||||||| | ||||||| ||| ||||| |||| ||||    
T  35176 attttggcctctttcgtctcaaaattgttgagaaaacgccatgtgtctcaaaaaagatatcataatcacaagtttttctaaagataa 35262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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