View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3196_high_21 (Length: 284)
Name: NF3196_high_21
Description: NF3196
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3196_high_21 |
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Alignment Details
Target: chr8 (Bit Score: 226; Significance: 1e-124; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 23 - 268
Target Start/End: Original strand, 36986962 - 36987207
Alignment:
| Q |
23 |
taacctgaaacaccttgcttatataatataaatgtcatctttctatgaagaaaataatcgattgaagctggaagctcaagaatttgcttgtatatttgat |
122 |
Q |
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| T |
36986962 |
taacctgaaacaccttgcttatataatataaatgtcatctttctatgaagaaaataatcgattgaagctggaagctcaagaatttgcttgtatatttgat |
36987061 |
T |
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| Q |
123 |
gaaaaatctactgttcaggaattgcctccaaaggtaaatatgcttttgtttttccttatcctaaagagagatgtctgaatggaagtcaatatttttcatt |
222 |
Q |
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|||||||||||| ||||||| |||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36987062 |
gaaaaatctactattcaggatttgcctccaaaggtaaatttgctcttgtttttccttatcctaaagagagatgtctgaatggaagtcaatatttttcatt |
36987161 |
T |
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| Q |
223 |
tgactaatttgttgcgtagcttgttgatcatttgactatttttcat |
268 |
Q |
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||||||||| |||||||||||||||||||||||||||||||||||| |
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| T |
36987162 |
tgactaattggttgcgtagcttgttgatcatttgactatttttcat |
36987207 |
T |
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