View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3197_high_1 (Length: 240)
Name: NF3197_high_1
Description: NF3197
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3197_high_1 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 224; Significance: 1e-123; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 46411917 - 46411678
Alignment:
| Q |
1 |
aatatacaagtaagaagactcatataaacattgtttttgtttttgatagagatgttatgaaaaattctcttcacgttgttgctcttggttgatatggatg |
100 |
Q |
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| T |
46411917 |
aatatacaaataagaagactcatataaacattgtttttgtttttgatagagatgttatgacaaattctcttcacgttgttgctcttggttgatatggatg |
46411818 |
T |
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| Q |
101 |
atctcttggactcctctcatgatacaacaaggttatcagagtcgttggttactggagggatcgactttttgtgtggaaagtcttctcgatattggtggtg |
200 |
Q |
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| T |
46411817 |
atctcttggactcctctcatgatacaacaaggttatcagagtcgttggttactggagggatcgactttttgtgtggaaagtcttctcgagattggtggtg |
46411718 |
T |
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| Q |
201 |
aagagagattgttgtgtagcaagtgagtttgaagttccac |
240 |
Q |
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| T |
46411717 |
aagagagactgttgtgtagcaagtgagtttgaagttccac |
46411678 |
T |
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