View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3197_high_2 (Length: 237)
Name: NF3197_high_2
Description: NF3197
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3197_high_2 |
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Alignment Details
Target: chr7 (Bit Score: 196; Significance: 1e-107; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 1 - 219
Target Start/End: Complemental strand, 46411670 - 46411454
Alignment:
| Q |
1 |
gaaaaagtgaaggttgaacgatgtgtaagtgagaggacttataaaccaaatgctttaagatttttgataaagatgtgctgtaaaattttctgtgttattg |
100 |
Q |
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| T |
46411670 |
gaaaaagtgaaggttgaacaatgtgtaagtgagaggacttataaaccaaatgctttaagatttttgataaagatgtgctgtaaaattttctgt--tattg |
46411573 |
T |
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| Q |
101 |
ctttttgtctaatatggatgatttcccagacactcctcacgatccaacaaatgtatcagtgtcaaacatcttcattttcatcatcagatcgacgaaacaa |
200 |
Q |
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| T |
46411572 |
ctttttgtctaatatggatgatttcccagacactcctcacgatccaacaaatgtatcagtgtcaaacatcttcattttcatcgtcagatcgacggaacaa |
46411473 |
T |
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| Q |
201 |
ggtatgagcaagagaaaac |
219 |
Q |
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||||||||||||||||||| |
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| T |
46411472 |
ggtatgagcaagagaaaac |
46411454 |
T |
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