View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3198_high_51 (Length: 217)
Name: NF3198_high_51
Description: NF3198
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3198_high_51 |
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Alignment Details
Target: chr5 (Bit Score: 139; Significance: 7e-73; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 46 - 200
Target Start/End: Original strand, 6505002 - 6505156
Alignment:
| Q |
46 |
aaatgtattattattagatagctagtttatcatattcttattaaactcttttaacataaatataatctctatatgccatgatcggcaatcgtatgctaaa |
145 |
Q |
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| T |
6505002 |
aaatgtattattattagatagctagtatatcatattcttattaaactcttttaacataaatataatctctatatgccatgatcggcaatcgtatgctaaa |
6505101 |
T |
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| Q |
146 |
cgtttatgatagaacttatcataaaacaaattacaacgttatttagtgtaaattg |
200 |
Q |
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| T |
6505102 |
cgtttatgatagaacctatcataaaacaaataacaacgttatttaatgtaaattg |
6505156 |
T |
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