View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3198_low_19 (Length: 366)
Name: NF3198_low_19
Description: NF3198
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3198_low_19 |
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Alignment Details
Target: chr7 (Bit Score: 265; Significance: 1e-148; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 265; E-Value: 1e-148
Query Start/End: Original strand, 10 - 350
Target Start/End: Original strand, 37110557 - 37110886
Alignment:
| Q |
10 |
aatatggatacatattcctaattgtaggttccaaattaattaattttatgataatgagggctaattgtagcacgagaatgttaagtaacaatcattatgg |
109 |
Q |
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| T |
37110557 |
aatatggatacatattcctaattgtaggttctaaatta-ttaattttatgataatgagggctaattgtagcacgagaatgttaagtaacaatcattatgg |
37110655 |
T |
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| Q |
110 |
ttgaattttcctttccacgtacctaatgatgagtattacaattcttatcttttgnnnnnnnactatttatagcttgcttacatttctaagtaatgaatta |
209 |
Q |
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| T |
37110656 |
ttgaattttcctttccacgtacctaatgatgagtattacaattcttatcttttgattttttactatttatagcttgcttacatttctaagtaatgaatta |
37110755 |
T |
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| Q |
210 |
cccaatgaaaactttaacttcaagcaaattataaaataactgaagacagacattcttcaatatatataccttatcaactcctcagatatttcatcaagaa |
309 |
Q |
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||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37110756 |
cccaatgaaaactttaacttcaagc----------ataattgaagacagacattcttcaatatatataccttatcaactcctcagatatttcatcaagaa |
37110845 |
T |
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| Q |
310 |
atcaaactccaaagaagaaactaagaagctaaccatgtttt |
350 |
Q |
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| T |
37110846 |
atcaaactccaaagaagaaactaagaagccaaccatgtttt |
37110886 |
T |
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