View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3198_low_5 (Length: 535)

Name: NF3198_low_5
Description: NF3198
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3198_low_5
NF3198_low_5
[»] chr6 (5 HSPs)
chr6 (10-102)||(29950984-29951076)
chr6 (10-45)||(30037791-30037826)
chr6 (10-45)||(30040083-30040118)
chr6 (10-45)||(30153377-30153412)
chr6 (10-46)||(30148409-30148445)
[»] chr1 (5 HSPs)
chr1 (331-508)||(34264129-34264316)
chr1 (270-326)||(5522066-5522122)
chr1 (270-326)||(28055746-28055802)
chr1 (270-326)||(32505566-32505622)
chr1 (274-326)||(52293771-52293823)
[»] chr8 (5 HSPs)
chr8 (270-332)||(29362346-29362408)
chr8 (273-312)||(17707826-17707865)
chr8 (270-325)||(27111052-27111107)
chr8 (290-328)||(44996724-44996762)
chr8 (270-315)||(9840013-9840058)
[»] chr3 (6 HSPs)
chr3 (228-281)||(49559419-49559472)
chr3 (213-277)||(51280469-51280533)
chr3 (206-281)||(27007857-27007933)
chr3 (232-277)||(34073085-34073130)
chr3 (228-277)||(47183904-47183953)
chr3 (270-326)||(27007783-27007839)
[»] chr4 (5 HSPs)
chr4 (233-281)||(42158848-42158896)
chr4 (274-317)||(7741100-7741143)
chr4 (265-327)||(37149564-37149626)
chr4 (228-281)||(51480658-51480711)
chr4 (232-281)||(52440562-52440611)
[»] scaffold0110 (1 HSPs)
scaffold0110 (10-45)||(44956-44991)
[»] chr5 (5 HSPs)
chr5 (270-317)||(34444913-34444960)
chr5 (232-278)||(23251779-23251825)
chr5 (228-277)||(7119206-7119255)
chr5 (232-281)||(34445092-34445141)
chr5 (232-280)||(11494913-11494961)
[»] chr7 (2 HSPs)
chr7 (234-279)||(35341005-35341050)
chr7 (232-276)||(38831820-38831864)
[»] chr2 (2 HSPs)
chr2 (228-277)||(38768804-38768853)
chr2 (270-326)||(10673801-10673857)


Alignment Details
Target: chr6 (Bit Score: 81; Significance: 7e-38; HSPs: 5)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 10 - 102
Target Start/End: Original strand, 29950984 - 29951076
Alignment:
Q  10 atgaacgaaggaagaggctgaatgtgtaaacgacgaattggaagaaagaaattggcagtggaggctgaacgtgtaaatgatgacgtcatcata 102  Q
    |||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  29950984 atgaacaaaggaagaggctgaatgtgtaaacgacgaactggaagaaagaaattggcagtggaggctgaacgtgtaaatgatgacatcatcata 29951076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 10 - 45
Target Start/End: Complemental strand, 30037826 - 30037791
Alignment:
Q  10 atgaacgaaggaagaggctgaatgtgtaaacgacga 45  Q
    ||||||||||||||||||||||||||||| ||||||    
T  30037826 atgaacgaaggaagaggctgaatgtgtaatcgacga 30037791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 10 - 45
Target Start/End: Complemental strand, 30040118 - 30040083
Alignment:
Q  10 atgaacgaaggaagaggctgaatgtgtaaacgacga 45  Q
    ||||||||||||||||||||||||||||| ||||||    
T  30040118 atgaacgaaggaagaggctgaatgtgtaatcgacga 30040083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 10 - 45
Target Start/End: Complemental strand, 30153412 - 30153377
Alignment:
Q  10 atgaacgaaggaagaggctgaatgtgtaaacgacga 45  Q
    ||||||||||||||||||||||||||||| ||||||    
T  30153412 atgaacgaaggaagaggctgaatgtgtaatcgacga 30153377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 10 - 46
Target Start/End: Complemental strand, 30148445 - 30148409
Alignment:
Q  10 atgaacgaaggaagaggctgaatgtgtaaacgacgaa 46  Q
    |||||||||||||| |||||||||||||| |||||||    
T  30148445 atgaacgaaggaagtggctgaatgtgtaatcgacgaa 30148409  T

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Target: chr1 (Bit Score: 53; Significance: 4e-21; HSPs: 5)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 331 - 508
Target Start/End: Complemental strand, 34264316 - 34264129
Alignment:
Q  331 tattacattattttcatgaagcaatttttgtcacattttaaatgtaataaacctctttaag-----aaactctta----ctttgattttattttttgttg 421  Q
    ||||| ||||| | |||||||||||||||||||||||| |||||||||||||| | ||||      |||| ||||    |||||||||| |||| |||||    
T  34264316 tattatattatctccatgaagcaatttttgtcacatttcaaatgtaataaaccccattaaattaacaaacccttatttactttgattttcttttctgttg 34264217  T
Q  422 ggaatttaggatttgatctcttcaaattgatggtgatcatct--tgtgagtttattggtttgtacaggtacataaccgactaataataa 508  Q
    |  |||| |||||||||||||||||||||| | ||||||| |  |||||||||||  ||||||||| ||| ||||||| ||||||||||    
T  34264216 gtgattt-ggatttgatctcttcaaattgaagttgatcattttgtgtgagtttatgagtttgtacaagtatataaccggctaataataa 34264129  T

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Target: chr1; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 270 - 326
Target Start/End: Original strand, 5522066 - 5522122
Alignment:
Q  270 aacttaaaggactaatctagtatttttgttaaacttaaaggaccaaaataagtattt 326  Q
    ||||||||||||||| || ||| |||||| |||||||||||||||||| | ||||||    
T  5522066 aacttaaaggactaacctggtagttttgtcaaacttaaaggaccaaaagatgtattt 5522122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 270 - 326
Target Start/End: Complemental strand, 28055802 - 28055746
Alignment:
Q  270 aacttaaaggactaatctagtatttttgttaaacttaaaggaccaaaataagtattt 326  Q
    ||||||||||||||| || |||||||||| |||||||||| ||||||| | ||||||    
T  28055802 aacttaaaggactaacctggtatttttgtcaaacttaaagaaccaaaagaggtattt 28055746  T

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Target: chr1; HSP #4
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 270 - 326
Target Start/End: Original strand, 32505566 - 32505622
Alignment:
Q  270 aacttaaaggactaatctagtatttttgttaaacttaaaggaccaaaataagtattt 326  Q
    ||||||||||||||| | | |||||| || ||| |||||||| ||||||||||||||    
T  32505566 aacttaaaggactaacccaatattttcgtcaaagttaaaggagcaaaataagtattt 32505622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 274 - 326
Target Start/End: Complemental strand, 52293823 - 52293771
Alignment:
Q  274 taaaggactaatctagtatttttgttaaacttaaaggaccaaaataagtattt 326  Q
    ||||||||||| |  |||||||||| ||| ||||||||| |||||||||||||    
T  52293823 taaaggactaacccggtatttttgtcaaaattaaaggacgaaaataagtattt 52293771  T

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Target: chr8 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 5)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 270 - 332
Target Start/End: Original strand, 29362346 - 29362408
Alignment:
Q  270 aacttaaaggactaatctagtatttttgttaaacttaaaggaccaaaataagtattttggcta 332  Q
    ||||| ||||||||| ||||||||||||| ||||||||| || ||||||||||||||||||||    
T  29362346 aacttgaaggactaacctagtatttttgtaaaacttaaatgatcaaaataagtattttggcta 29362408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 273 - 312
Target Start/End: Complemental strand, 17707865 - 17707826
Alignment:
Q  273 ttaaaggactaatctagtatttttgttaaacttaaaggac 312  Q
    ||||||||||||||| |||||||||| |||||||||||||    
T  17707865 ttaaaggactaatctcgtatttttgtcaaacttaaaggac 17707826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 270 - 325
Target Start/End: Original strand, 27111052 - 27111107
Alignment:
Q  270 aacttaaaggactaatctagtatttttgttaaacttaaaggaccaaaataagtatt 325  Q
    ||||||||||| ||||||| ||||||||| |||||| || |||||||| |||||||    
T  27111052 aacttaaaggattaatctaatatttttgtcaaacttgaatgaccaaaagaagtatt 27111107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 290 - 328
Target Start/End: Complemental strand, 44996762 - 44996724
Alignment:
Q  290 tatttttgttaaacttaaaggaccaaaataagtattttg 328  Q
    ||||||||| |||||||||||||||||||| ||||||||    
T  44996762 tatttttgtcaaacttaaaggaccaaaatatgtattttg 44996724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 270 - 315
Target Start/End: Complemental strand, 9840058 - 9840013
Alignment:
Q  270 aacttaaaggactaatctagtatttttgttaaacttaaaggaccaa 315  Q
    |||||||||||||||||  |||||||| | ||||||||||||||||    
T  9840058 aacttaaaggactaatccggtatttttatcaaacttaaaggaccaa 9840013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 34; Significance: 0.0000000008; HSPs: 6)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 228 - 281
Target Start/End: Complemental strand, 49559472 - 49559419
Alignment:
Q  228 atttaaaacttaaacaatttcaaatatgtacattaaattaacaacttaaaggac 281  Q
    |||| ||||||||| || ||||||||||| ||||||||||| ||||||||||||    
T  49559472 atttgaaacttaaaaaacttcaaatatgtgcattaaattaaaaacttaaaggac 49559419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 213 - 277
Target Start/End: Original strand, 51280469 - 51280533
Alignment:
Q  213 tactcttttaaagac--atttaaaacttaaacaatttcaaatatgtacattaaattaacaacttaaa 277  Q
    ||||||||||| |||  ||||||||||||||  ||||||||||||| ||||||| ||||||||||||    
T  51280469 tactcttttaaggaccaatttaaaacttaaa--atttcaaatatgtgcattaaactaacaacttaaa 51280533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 206 - 281
Target Start/End: Complemental strand, 27007933 - 27007857
Alignment:
Q  206 acactgatactcttttaaagac--atttaaaacttaaacaatttcaaatatgtacattaaattaacaacttaaaggac 281  Q
    |||||| ||||||||||| |||  |||| ||||||||| || |||||||| ||  |||||||||||||||||||||||    
T  27007933 acactgctactcttttaaggacctatttgaaacttaaa-aacttcaaataggtgtattaaattaacaacttaaaggac 27007857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 232 - 277
Target Start/End: Complemental strand, 34073130 - 34073085
Alignment:
Q  232 aaaacttaaacaatttcaaatatgtacattaaattaacaacttaaa 277  Q
    |||||||||| || ||||||||  ||||||||||||||||||||||    
T  34073130 aaaacttaaaaaacttcaaatagatacattaaattaacaacttaaa 34073085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 228 - 277
Target Start/End: Original strand, 47183904 - 47183953
Alignment:
Q  228 atttaaaacttaaacaatttcaaatatgtacattaaattaacaacttaaa 277  Q
    |||| ||||||||| || |||||||||||  |||||||||||||||||||    
T  47183904 atttgaaacttaaaaaacttcaaatatgtgtattaaattaacaacttaaa 47183953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 270 - 326
Target Start/End: Complemental strand, 27007839 - 27007783
Alignment:
Q  270 aacttaaaggactaatctagtatttttgttaaacttaaaggaccaaaataagtattt 326  Q
    ||||||||||||||| |  ||||||||||| |||||||||||| |||| | ||||||    
T  27007839 aacttaaaggactaagccggtatttttgttgaacttaaaggactaaaagatgtattt 27007783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 33; Significance: 0.000000003; HSPs: 5)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 233 - 281
Target Start/End: Complemental strand, 42158896 - 42158848
Alignment:
Q  233 aaacttaaacaatttcaaatatgtacattaaattaacaacttaaaggac 281  Q
    ||||||||| || ||||||||||| || |||||||||||||||||||||    
T  42158896 aaacttaaaaaacttcaaatatgtgcactaaattaacaacttaaaggac 42158848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 274 - 317
Target Start/End: Complemental strand, 7741143 - 7741100
Alignment:
Q  274 taaaggactaatctagtatttttgttaaacttaaaggaccaaaa 317  Q
    |||| |||||||||||||||||||| ||||||||||||| ||||    
T  7741143 taaaagactaatctagtatttttgtcaaacttaaaggactaaaa 7741100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 265 - 327
Target Start/End: Original strand, 37149564 - 37149626
Alignment:
Q  265 ttaacaacttaaaggactaatctagtatttttgttaaacttaaaggaccaaaataagtatttt 327  Q
    |||| ||| ||||||||||||   |||||||||| ||| ||||||||| ||||||||||||||    
T  37149564 ttaagaacgtaaaggactaattcggtatttttgtcaaaattaaaggactaaaataagtatttt 37149626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 228 - 281
Target Start/End: Complemental strand, 51480711 - 51480658
Alignment:
Q  228 atttaaaacttaaacaatttcaaatatgtacattaaattaacaacttaaaggac 281  Q
    |||| ||||||||| ||||||||||| || |||| || ||||||||||||||||    
T  51480711 atttgaaacttaaaaaatttcaaataggtgcattgaagtaacaacttaaaggac 51480658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 232 - 281
Target Start/End: Complemental strand, 52440611 - 52440562
Alignment:
Q  232 aaaacttaaacaatttcaaatatgtacattaaattaacaacttaaaggac 281  Q
    |||||||||| || || ||||| || ||||||||||||||||||||||||    
T  52440611 aaaacttaaaaaaatttaaataggtgcattaaattaacaacttaaaggac 52440562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 10 - 45
Target Start/End: Original strand, 44956 - 44991
Alignment:
Q  10 atgaacgaaggaagaggctgaatgtgtaaacgacga 45  Q
    ||||||||||||||||||||||||||||| ||||||    
T  44956 atgaacgaaggaagaggctgaatgtgtaatcgacga 44991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 32; Significance: 0.00000001; HSPs: 5)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 270 - 317
Target Start/End: Complemental strand, 34444960 - 34444913
Alignment:
Q  270 aacttaaaggactaatctagtatttttgttaaacttaaaggaccaaaa 317  Q
    |||||||||||||||||   ||||||||| ||||||||||||||||||    
T  34444960 aacttaaaggactaatccgatatttttgtcaaacttaaaggaccaaaa 34444913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 232 - 278
Target Start/End: Original strand, 23251779 - 23251825
Alignment:
Q  232 aaaacttaaacaatttcaaatatgtacattaaattaacaacttaaag 278  Q
    |||||||||| || ||||||||||||||||||||||  |||||||||    
T  23251779 aaaacttaaaaaacttcaaatatgtacattaaattattaacttaaag 23251825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 228 - 277
Target Start/End: Complemental strand, 7119255 - 7119206
Alignment:
Q  228 atttaaaacttaaacaatttcaaatatgtacattaaattaacaacttaaa 277  Q
    |||||||||||||| || |||||| | || ||||||||||||||||||||    
T  7119255 atttaaaacttaaaaaacttcaaaaaggtgcattaaattaacaacttaaa 7119206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 232 - 281
Target Start/End: Original strand, 34445092 - 34445141
Alignment:
Q  232 aaaacttaaacaatttcaaatatgtacattaaattaacaacttaaaggac 281  Q
    ||||||| || || ||||||||||| |||||||||| |||||||||||||    
T  34445092 aaaacttgaaaaacttcaaatatgtgcattaaattagcaacttaaaggac 34445141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 232 - 280
Target Start/End: Complemental strand, 11494961 - 11494913
Alignment:
Q  232 aaaacttaaacaatttcaaatatgtacattaaattaacaacttaaagga 280  Q
    |||||||| | || |||||||| || |||||||||||||||||||||||    
T  11494961 aaaacttataaaacttcaaataggtgcattaaattaacaacttaaagga 11494913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 30; Significance: 0.0000002; HSPs: 2)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 234 - 279
Target Start/End: Complemental strand, 35341050 - 35341005
Alignment:
Q  234 aacttaaacaatttcaaatatgtacattaaattaacaacttaaagg 279  Q
    |||||||| ||||||||||| |||| |||||||||||| |||||||    
T  35341050 aacttaaaaaatttcaaataggtactttaaattaacaatttaaagg 35341005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 232 - 276
Target Start/End: Original strand, 38831820 - 38831864
Alignment:
Q  232 aaaacttaaacaatttcaaatatgtacattaaattaacaacttaa 276  Q
    |||||||||| || |||||||| || |||||||||||||||||||    
T  38831820 aaaacttaaaaaaattcaaataggttcattaaattaacaacttaa 38831864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 30; Significance: 0.0000002; HSPs: 2)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 228 - 277
Target Start/End: Complemental strand, 38768853 - 38768804
Alignment:
Q  228 atttaaaacttaaacaatttcaaatatgtacattaaattaacaacttaaa 277  Q
    |||||||||||||| || ||||||||  |||||||||||||||| |||||    
T  38768853 atttaaaacttaaaaaacttcaaataaatacattaaattaacaaattaaa 38768804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 270 - 326
Target Start/End: Complemental strand, 10673857 - 10673801
Alignment:
Q  270 aacttaaaggactaatctagtatttttgttaaacttaaaggaccaaaataagtattt 326  Q
    ||||||||||| | | ||||||||||||| ||||||||||||| ||||  |||||||    
T  10673857 aacttaaaggattgacctagtatttttgtcaaacttaaaggactaaaagtagtattt 10673801  T

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