View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3202_low_9 (Length: 234)
Name: NF3202_low_9
Description: NF3202
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3202_low_9 |
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Alignment Details
Target: chr1 (Bit Score: 135; Significance: 2e-70; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 83 - 217
Target Start/End: Complemental strand, 122041 - 121907
Alignment:
| Q |
83 |
gtataatcgctaacaaaattttataatggaaaacaaatataaaaagttgtataactctactacaaaatcaattaactgtgaggctccacagtagatgttc |
182 |
Q |
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| T |
122041 |
gtataatcgctaacaaaattttataatggaaaacaaatataaaaagttgtataactctactacaaaatcaattaactgtgaggctccacagtagatgttc |
121942 |
T |
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| Q |
183 |
taatatgttgtataatctagcacctactacatcat |
217 |
Q |
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||||||||||||||||||||||||||||||||||| |
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| T |
121941 |
taatatgttgtataatctagcacctactacatcat |
121907 |
T |
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