View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3210-Insertion-10 (Length: 434)
Name: NF3210-Insertion-10
Description: NF3210
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3210-Insertion-10 |
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Alignment Details
Target: chr4 (Bit Score: 292; Significance: 1e-164; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 292; E-Value: 1e-164
Query Start/End: Original strand, 21 - 348
Target Start/End: Complemental strand, 34550960 - 34550634
Alignment:
| Q |
21 |
aaattgtcttcatgtgagaggatttttagagattgcagaggtgcctcatgggtggtttttcttgtaaacctaagcacttatacatatataatcgttcaaa |
120 |
Q |
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| T |
34550960 |
aaattgtcttcatgtgagaggatttttagagattgcagaggtgcctcatgggtggtttctcttgtaa-cctaagcacttatacatatattatcgttcaaa |
34550862 |
T |
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| Q |
121 |
tgtaacagttcaagttttttctaatcatttactaatttcttggaggttgtaaaattggtgagctaattgttcacgttactagaagtttttattttaggaa |
220 |
Q |
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| T |
34550861 |
tgtaacagttcaagttttttctaatcatttactaattccttggtggtggtaaaattggtgagctaattgttcacgttactagaagtttttattttaggaa |
34550762 |
T |
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| Q |
221 |
gagaacaactgtgcttataagttagctaacattgtttcaaaaataaaataaaattagctaacatgtgtttttagtgtaatgaggtaatatctaattaata |
320 |
Q |
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||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34550761 |
gagaacaactgtgcttataagttagctaacattgtttcaaaaaaaaaaaaaaattagctaacatgtgtttttagtgtaatgaggtaatatctaattaata |
34550662 |
T |
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| Q |
321 |
tgggtggaattcattgccaaattatatc |
348 |
Q |
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|||||||||||||||||||||||||||| |
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| T |
34550661 |
tgggtggaattcattgccaaattatatc |
34550634 |
T |
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